Pregenerated sensors for EBPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021928Ensembl transcript IDs: ENSMUST00000022494.10
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ACCACGGTGCAAGCTCTCAGCTACTGCCCCAGCACCATCCCTGCCTaGCTGCCTGCCTGCCTGCCTCCCACTATGTTTCCCACCATGATG | + |
Preference number: 1 (lower is better) Translates to: TTVQALSYCPSTIPA*LPACLPPTMFPTMM Trigger: CATCATGGTGGGAAACATAGTGGGAGGCAGGCAGGCAGGCAGGCAGGCAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACCGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | TGTCTTCCAAACCACAGGGTGGACTCGGCCAAGGGAGGCATGGCCTaGCCAACGACCACCACTGGAGCCACTCCCACCTCAGTCTGTCTT | + |
Preference number: 1 (lower is better) Translates to: CLPNHRVDSAKGGMA*PTTTTGATPTSVCL Trigger: AAGACAGACTGAGGTGGGAGTGGCTCCAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTTTGGAAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | CTCCAGTGCCCAGTACCACGAAGCGGGCGTGGGTCCAGGTGTGGGTaGTCTCCTGAGCAGAGGGATGGGTTAAGTCGTATTGTGAGTACC | + |
Preference number: 1 (lower is better) Translates to: LQCPVPRSGRGSRCG*SPEQRDGLSRIVST Trigger: GGTACTCACAATACGACTTAACCCATCCCTCTGCTCAGGAGAGCACCCACACCTGGACCCACGCCCGCTTCGTGGTACTGGGCACTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | CCCTTCCTTAGCAATCACCCATCAGGGAGAAGAGGCCAGGTACTCTaGGGACTGCAGCCTGTCCTGTGTCCTGCAGGCCAGCCTGGGTTA | + |
Preference number: 1 (lower is better) Translates to: PFLSNHPSGRRGQVL*GLQPVLCPAGQPGL Trigger: TAACCCAGGCTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGTGATTGCTAAGGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GTGCCTTGGCAGATCCAACCTGGTCCTGCACACCTACAGGATTCCTaGAGAGCCGCTGGTGCTCAGTCGATGACAGAAGCCGGGAACTGC | + |
Preference number: 1 (lower is better) Translates to: VPWQIQPGPAHLQDS*RAAGAQSMTEAGNC Trigger: GCAGTTCCCGGCTTCTGTCATCGACTGAGCACCAGCGGCTCTCCAGGAATCCTGTAGGTGTGCAGGACCAGGTTGGATCTGCCAAGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | GTGGTGGCACAGGAAGTCATGGTAGGCACAGTGACAGAGCAGAGCTaGTCACTCGGCCAGGCATGGCCTCTTGTGATCCCAGCACTTCAG | + |
Preference number: 1 (lower is better) Translates to: VVAQEVMVGTVTEQS*SLGQAWPLVIPALQ Trigger: CTGAAGTGCTGGGATCACAAGAGGCCATGCCTGGCCGAGTGAGCAGCTCTGCTCTGTCACTGTGCCTACCATGACTTCCTGTGCCACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | TTAGCAATCACCCATCAGGGAGAAGAGGCCAGGTACTCTGGGGACTaGAGCCTGTCCTGTGTCCTGCAGGCCAGCCTGGGTTATACCATC | + |
Preference number: 1 (lower is better) Translates to: LAITHQGEEARYSGD*SLSCVLQASLGYTI Trigger: GATGGTATAACCCAGGCTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGTGATTGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | AGAGATGAAGGGGAAGAGAGACCTAAACTGGACCAGCAGCCAGACTaGCAAAGAGTGAGCGGCCTGGCTCCAGTGCCCAGTACCACGAAG | + |
Preference number: 1 (lower is better) Translates to: RDEGEERPKLDQQPD*QRVSGLAPVPSTTK Trigger: CTTCGTGGTACTGGGCACTGGAGCCAGGCCGCTCACTCTTTGCCAGTCTGGCTGCTGGTCCAGTTTAGGTCTCTCTTCCCCTTCATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GTGAGGTGTCTCTCAGTTATAAGGGATGTCTTCCAAACCACAGGGTaGACTCGGCCAAGGGAGGCATGGCCTGACCAACGACCACCACTG | + |
Preference number: 1 (lower is better) Translates to: VRCLSVIRDVFQTTG*TRPREAWPDQRPPL Trigger: CAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTTTGGAAGACATCCCTTATAACTGAGAGACACCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | CAAGCCAGGAATCTGGAGGAAGTTGATGCAGAAGCCATGGAGGGGTaGTGCTTACTGGCTTGCTCCCTGTGGCTTGCTCAGCTTGCTTTC | + |
Preference number: 1 (lower is better) Translates to: QARNLEEVDAEAMEG*CLLACSLWLAQLAF Trigger: GAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | ATTCTCAGTGTGTTCTTTCTTCTCTCTGCCTCACATAGACCACGGTaGAAGCTCTCAGCTACTGCCCCAGCACCATCCCTGCCTGCCTGC | + |
Preference number: 1 (lower is better) Translates to: ILSVFFLLSASHRPR*KLSATAPAPSLPAC Trigger: GCAGGCAGGCAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACCGTGGTCTATGTGAGGCAGAGAGAAGAAAGAACACACTGAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | AGGACCTTCATGAACCAAGCAGGAAGAGGAAGGCAGAGCCCTGTATaGGGACTGAACCTGGTTTGGTTCCGAGTGAGTGCCCAGAGTGTG | + |
Preference number: 1 (lower is better) Translates to: RTFMNQAGRGRQSPV*GLNLVWFRVSAQSV Trigger: CACACTCTGGGCACTCACTCGGAACCAAACCAGGTTCAGTCCCCATACAGGGCTCTGCCTTCCTCTTCCTGCTTGGTTCATGAAGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | GAAGTCAGGACAGCAACCCAAACAAGCCAGGAATCTGGAGGAAGTTaGTGCAGAAGCCATGGAGGGGTGCTGCTTACTGGCTTGCTCCCT | + |
Preference number: 1 (lower is better) Translates to: EVRTATQTSQESGGS*CRSHGGVLLTGLLP Trigger: AGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTTTGGGTTGCTGTCCTGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | GGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTTaGTGTGGACAGACCTGTGGTGGCACAGGAAGTCATGGTAGGCAC | + |
Preference number: 1 (lower is better) Translates to: GSWFMWFRITVAWPC*CGQTCGGTGSHGRH Trigger: GTGCCTACCATGACTTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | TGCATGTCCCCTGTCAGCTCTCTGCTGTACTCTGTGCCAGGGATCTaGAGGTCAAGACACCAAGTCACTTCTGTGAGAACTAGAGTGTCC | + |
Preference number: 1 (lower is better) Translates to: CMSPVSSLLYSVPGI*RSRHQVTSVRTRVS Trigger: GGACACTCTAGTTCTCACAGAAGTGACTTGGTGTCTTGACCTCCAGATCCCTGGCACAGAGTACAGCAGAGAGCTGACAGGGGACATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | GGGAAGCTCATGAAACATAAAGTAAGGCCACATTTGAGGAGTCAGTaGAATGGCCCGGAGGGTAAAGGTTCCTGCCACCAAGCCTCGGCA | + |
Preference number: 1 (lower is better) Translates to: GKLMKHKVRPHLRSQ*NGPEGKGSCHQASA Trigger: TGCCGAGGCTTGGTGGCAGGAACCTTTACCCTCCGGGCCATTTCACTGACTCCTCAAATGTGGCCTTACTTTATGTTTCATGAGCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | TGCGGAAGGCCAAGCCAGGCCAGTGACCTTCCTTGTGCCAGGAAGTaGTGCCCATATTTAGAGATGGGTCTTCCCATACCAATAAGGCAA | + |
Preference number: 1 (lower is better) Translates to: CGRPSQASDLPCARK*CPYLEMGLPIPIRQ Trigger: TTGCCTTATTGGTATGGGAAGACCCATCTCTAAATATGGGCATCACTTCCTGGCACAAGGAAGGTCACTGGCCTGGCTTGGCCTTCCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | TCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTTGTGTCTGGTaGCACAGTTCACTTGCCCCACAACCAACCAGCTTCTGCTATGGG | + |
Preference number: 1 (lower is better) Translates to: SWGLRSLNLTTSCVW*HSSLAPQPTSFCYG Trigger: CCCATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | CTTCAGGGAGAGAAGGGATTGAACCAGGACCTAACTGCAGCACAATaGCCACACTGCAGCCTCTCTTCCAGAGTTGGAAAGAGGCCATTT | + |
Preference number: 1 (lower is better) Translates to: LQGEKGLNQDLTAAQ*PHCSLSSRVGKRPF Trigger: AAATGGCCTCTTTCCAACTCTGGAAGAGAGGCTGCAGTGTGGCCATTGTGCTGCAGTTAGGTCCTGGTTCAATCCCTTCTCTCCCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | ACCTGGAAGGTAGAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTaGTTGCCTAGCATGCTGGAGACACTGACCTTCATACGTTTAACA | + |
Preference number: 1 (lower is better) Translates to: TWKVEAGGLWVASLE*LPSMLETLTFIRLT Trigger: TGTTAAACGTATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GCTTCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTTGTGTCTaGTGGCACAGTTCACTTGCCCCACAACCAACCAGCTTCTGCTAT | + |
Preference number: 1 (lower is better) Translates to: ASWGLRSLNLTTSCV*WHSSLAPQPTSFCY Trigger: ATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | TCAAGACACCAAGTCACTTCTGTGAGAACTAGAGTGTCCCACACTTaGCAGTGGGACGTGTCTGTTCTTGGATACCAATGGGAGCCTGAG | + |
Preference number: 1 (lower is better) Translates to: SRHQVTSVRTRVSHT*QWDVSVLGYQWEPE Trigger: CTCAGGCTCCCATTGGTATCCAAGAACAGACACGTCCCACTGTCAAGTGTGGGACACTCTAGTTCTCACAGAAGTGACTTGGTGTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | CAGACACTACAAACTGAGCCACCTCCCCAGCCCAACTTATATTCTTaGGATGATGGGACTGTGGTAGAGGAGCATTTTGCAGGGATTGCC | + |
Preference number: 1 (lower is better) Translates to: QTLQTEPPPQPNLYS*DDGTVVEEHFAGIA Trigger: GGCAATCCCTGCAAAATGCTCCTCTACCACAGTCCCATCATCTCAAGAATATAAGTTGGGCTGGGGAGGTGGCTCAGTTTGTAGTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | CCAATCACACAAACATCTGAGGAAACTGGCTTCGAAAGTCAAGGATaGTTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGG | + |
Preference number: 1 (lower is better) Translates to: PITQTSEETGFESQG*LLATVGLHPASLLG Trigger: CCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGACTTTCGAAGCCAGTTTCCTCAGATGTTTGTGTGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | CAGCCTTCAGATGAAGATGTAGAACTCTCAGCTCTACCTGCACCATaGCTGCCTAGATGTTGCCCCACTCACACCTTGATGATAATGGAC | + |
Preference number: 1 (lower is better) Translates to: QPSDEDVELSALPAP*LPRCCPTHTLMIMD Trigger: GTCCATTATCATCAAGGTGTGAGTGGGGCAACATCTAGGCAGGCATGGTGCAGGTAGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GAGAGGTTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTaGCTTGGCCCTGTTGCTGTGGACAGACCTGTGGTGGCACAGGAA | + |
Preference number: 1 (lower is better) Translates to: ERFNLAHGLCGFGLQ*LGPVAVDRPVVAQE Trigger: TTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAACCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GTGAAACACCATGGCCAAAGGCAAGCGGGAAGGAAGGGGTTTCTTTaGCTTACCTTTCCACATCATAGTCCATCACCAAAGGAAGTCAGG | + |
Preference number: 1 (lower is better) Translates to: VKHHGQRQAGRKGFL*LTFPHHSPSPKEVR Trigger: CCTGACTTCCTTTGGTGATGGACTATGATGTGGAAAGGTAAGCCAAAGAAACCCCTTCCTTCCCGCTTGCCTTTGGCCATGGTGTTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | TGCCTGCCTAGATGTTGCCCCACTCACACCTTGATGATAATGGACTaGACCTCTGAACCTGTAAGCCAGCCCCAGTTAAATGTTGTCCTT | + |
Preference number: 1 (lower is better) Translates to: CLPRCCPTHTLMIMD*TSEPVSQPQLNVVL Trigger: AAGGACAACATTTAACTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTGTGAGTGGGGCAACATCTAGGCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 90 bp | GAGAAGGGATTGAACCAGGACCTAACTGCAGCACAATGGCCACACTaGAGCCTCTCTTCCAGAGTTGGAAAGAGGCCATTTAATACTTTC | + |
Preference number: 1 (lower is better) Translates to: EKGLNQDLTAAQWPH*SLSSRVGKRPFNTF Trigger: GAAAGTATTAAATGGCCTCTTTCCAACTCTGGAAGAGAGGCTGCAGTGTGGCCATTGTGCTGCAGTTAGGTCCTGGTTCAATCCCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | CTGACCCCAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTaGAACTGCAGGCATGCACCACTATACCACAGCTATAATTGTAAG | + |
Preference number: 1 (lower is better) Translates to: LTPNFWRYSCLRPGS*NCRHAPLYHSYNCK Trigger: CTTACAATTATAGCTGTGGTATAGTGGTGCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTGGGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | ACGATCCTGCTGCCTCAGCCTCTTGAGTGGCTAAAACCACAGATATaGGTCACCAGTACCCAGATTGTTTTCTTCTTGCTCTTCCAGTTT | + |
Preference number: 1 (lower is better) Translates to: TILLPQPLEWLKPQI*VTSTQIVFFLLFQF Trigger: AAACTGGAAGAGCAAGAAGAAAACAATCTGGGTACTGGTGACCCATATCTGTGGTTTTAGCCACTCAAGAGGCTGAGGCAGCAGGATCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | TGCTGTTGGAGTAGAAAGACCACGTTTTTGTTGATGTTCCTGTTTTaGAGGCATGGTCCTGTTATTGTAGCCCAGTTGGCTCTGGACTGG | + |
Preference number: 1 (lower is better) Translates to: CCWSRKTTFLLMFLF*RHGPVIVAQLALDW Trigger: CCAGTCCAGAGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAGGAACATCAACAAAAACGTGGTCTTTCTACTCCAACAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | AGATACAAGGTCACGGTGCCACCCAGACTCTTCTCAGATGAAGTATaGAGACATCTGCTCAATGCTTTCTGGATGGGAGGAGTTTACAAG | + |
Preference number: 1 (lower is better) Translates to: RYKVTVPPRLFSDEV*RHLLNAFWMGGVYK Trigger: CTTGTAAACTCCTCCCATCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTGGCACCGTGACCTTGTATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | CAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTaGTTAGTGGAGCCAAGACAGATACAAGGTCACGGTGCCACCCAG | + |
Preference number: 1 (lower is better) Translates to: QTAFTAQVLIITTED*LVEPRQIQGHGATQ Trigger: CTGGGTGGCACCGTGACCTTGTATCTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | CCCACAACCAACCAGCTTCTGCTATGGGCACAGATTCCTCAAAAGTaGAGGCCTTTTCAAACTACCCACCATTATATTGTGTGGGATGTG | + |
Preference number: 1 (lower is better) Translates to: PTTNQLLLWAQIPQK*RPFQTTHHYIVWDV Trigger: CACATCCCACACAATATAATGGTGGGTAGTTTGAAAAGGCCTTCACTTTTGAGGAATCTGTGCCCATAGCAGAAGCTGGTTGGTTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GGGCGGGTGTTGCTTTCACAGTCCCAGTCTAAATCAGATGATCTGTaGAAGCTTTCTGTTGTGTGGAAGCTTTCTGTTGCTGAGATAAAC | + |
Preference number: 1 (lower is better) Translates to: GRVLLSQSQSKSDDL*KLSVVWKLSVAEIN Trigger: GTTTATCTCAGCAACAGAAAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGACTGGGACTGTGAAAGCAACACCCGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GTACACTGTAGCTGTACAGATGGTTGTAAGCCACCATGTGATTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTA | + |
Preference number: 1 (lower is better) Translates to: VHCSCTDGCKPPCDC*DLNSGPLEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCTACAGTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | ATATCTTTTGCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTGGCTaGACACTAGGGGCCTATCTAGAGACTTCATTAGCATGGAGAACA | + |
Preference number: 1 (lower is better) Translates to: ISFAGRNVQEGKLIG*TLGAYLETSLAWRT Trigger: TGTTCTCCATGCTAATGAAGTCTCTAGATAGGCCCCTAGTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGCAAAAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | TTAAATATCTTTTGCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTaGCTGAACACTAGGGGCCTATCTAGAGACTTCATTAGCATGGAG | + |
Preference number: 1 (lower is better) Translates to: LNIFCRKECPGREAH*LNTRGLSRDFISME Trigger: CTCCATGCTAATGAAGTCTCTAGATAGGCCCCTAGTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGCAAAAGATATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | CAGTCCCAGTCTAAATCAGATGATCTGTGGAAGCTTTCTGTTGTGTaGAAGCTTTCTGTTGCTGAGATAAACACCCAAGGTAGCAACTTA | + |
Preference number: 1 (lower is better) Translates to: QSQSKSDDLWKLSVV*KLSVAEINTQGSNL Trigger: TAAGTTGCTACCTTGGGTGTTTATCTCAGCAACAGAAAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGACTGGGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | GAAAGCTATGTTATTACAGGTAACTGCTATCACACCAGTCAGTGGTaGCACATACCATTAATCCCAGCATACCAAAGGCAAAAACAGGCA | + |
Preference number: 1 (lower is better) Translates to: ESYVITGNCYHTSQW*HIPLIPAYQRQKQA Trigger: TGCCTGTTTTTGCCTTTGGTATGCTGGGATTAATGGTATGTGCCACCACTGACTGGTGTGATAGCAGTTACCTGTAATAACATAGCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 90 bp | CTAGAAAGCTATGTTATTACAGGTAACTGCTATCACACCAGTCAGTaGTGGCACATACCATTAATCCCAGCATACCAAAGGCAAAAACAG | + |
Preference number: 1 (lower is better) Translates to: LESYVITGNCYHTSQ*WHIPLIPAYQRQKQ Trigger: CTGTTTTTGCCTTTGGTATGCTGGGATTAATGGTATGTGCCACCACTGACTGGTGTGATAGCAGTTACCTGTAATAACATAGCTTTCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | ACTACTCCAGATTACCACTATCGTTCTCTGTTGGGCACACAAATTTaGAGCAATTTGAAGTTTGTAGGCATAACACAGAACCAACTCCTT | + |
Preference number: 1 (lower is better) Translates to: TTPDYHYRSLLGTQI*SNLKFVGITQNQLL Trigger: AAGGAGTTGGTTCTGTGTTATGCCTACAAACTTCAAATTGCTTCAAATTTGTGTGCCCAACAGAGAACGATAGTGGTAATCTGGAGTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 90 bp | TATAAGTTACCTTGGTCATGGTGTTCTGTTATGCCGGGAGAAAAGTaGCTAAGAAACACAGATCATCATCATCATCATCATCATTATTAT | + |
Preference number: 1 (lower is better) Translates to: YKLPWSWCSVMPGEK*LRNTDHHHHHHHYY Trigger: ATAATAATGATGATGATGATGATGATGATCTGTGTTTCTTAGTCACTTTTCTCCCGGCATAACAGAACACCATGACCAAGGTAACTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGGGGTCCAGGTGTGGGTaGTCTCCTGAGCAGAGGGAT | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAGSRCG*SPEQRD Trigger: ATCCCTCTGCTCAGGAGAGCACCCACACCTGGACCC...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGCAGAGAGGCGGGGCTTaGCATCCCTTCAAGAGCAAA | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAQRGGA*HPFKSK Trigger: TTTGCTCTTGAAGGGATGTCAAGCCCCGCCTCTCTG...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGAAATGCCCTACATGCTaGGTGGTGGTGGTGCACGTC | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAKCPTC*VVVVHV Trigger: GACGTGCACCACCACCACCCAGCATGTAGGGCATTT...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTCCACACCTCAGTTCTaGGCTTCATGGGGTTTGAGG | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRASTPQF*ASWGLR Trigger: CCTCAAACCCCATGAAGCTCAGAACTGAGGTGTGGA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGGGTTTCGGATTACAGTaGCTTGGCCCTGTTGCTGTG | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAGFGLQ*LGPVAV Trigger: CACAGCAACAGGGCCAAGCCACTGTAATCCGAAACC...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGCTAGGTGAAACACCATaGCCAAAGGCAAGCGGGAAG | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRALGETP*PKASGK Trigger: CTTCCCGCTTGCCTTTGGCCATGGTGTTTCACCTAG...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGCCTTCAGGACCTTCATaGACCAAGCAGGAAGAGGAA | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAPSGPS*TKQEEE Trigger: TTCCTCTTCCTGCTTGGTTCATGAAGGTCCTGAAGG...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGATGGCAGTCACTTCCTaGAACCAGGGTTTGAAACCC | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAMAVTS*NQGLKP Trigger: GGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCAT...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGGCACTGGGTTTCCCTaGGACTGGGGTTGCAGACTG | + |
Preference number: 2 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSGTGFP*DWGCRL Trigger: CAGTCTGCAACCCCAGTCTCAGGGAAACCCAGTGCC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | CCCACCTGTAAGAGAACCATGGCAGTCACTTCCTGGAACCAGGGTTaGAAACCCAGCATGATCCTGCCCCATCTGGGTACAGATTCTGTA | + |
Preference number: 2 (lower is better) Translates to: PTCKRTMAVTSWNQG*KPSMILPHLGTDSV Trigger: TACAGAATCTGTACCCAGATGGGGCAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCATGGTTCTCTTACAGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | GGTCACTCAACCTTACCACTTCTTGTGTCTGGTGGCACAGTTCACTaGCCCCACAACCAACCAGCTTCTGCTATGGGCACAGATTCCTCA | + |
Preference number: 2 (lower is better) Translates to: GHSTLPLLVSGGTVH*PHNQPASAMGTDSS Trigger: TGAGGAATCTGTGCCCATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | TTGATGTTCCTGTTTTGGAGGCATGGTCCTGTTATTGTAGCCCAGTaGGCTCTGGACTGGAGCTTCCTCTGCCTCGGCCTTAGTTACCAC | + |
Preference number: 2 (lower is better) Translates to: LMFLFWRHGPVIVAQ*ALDWSFLCLGLSYH Trigger: GTGGTAACTAAGGCCGAGGCAGAGGAAGCTCCAGTCCAGAGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAGGAACATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | CTTGTCACTAAACCCAGTGCTCACCAATCCCACCAGTCTGGCTACCCAGCAAACCTAGCCTGCCAGCCATaGCTGAGCGTCTCATTAAAT | + |
Preference number: 2 (lower is better) Translates to: LVTKPSAHQSHQSGYPANLACQP*LSVSLN Trigger: ATTTAATGAGACGCTCAGTCATGGCTGGCAGGCTAG...GTTTGCTGGGTAGCCAGACTGGTGGGATTGGTGAGCACTGGGTTTAGTGACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTTACCCATCCCCTCCTaGCTTCATGTCACATGTATT | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRALPIPS*LHVTCI Trigger: AATACATGTGACATGAAGGCAGGAGGGGATGGGTAA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | TTCCACACTGTTGCACAGGCTGACCCCAAACTTCTGGAGATACTCTaGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGCACCACTATA | + |
Preference number: 2 (lower is better) Translates to: FHTVAQADPKLLEIL*SASRKLKLQACTTI Trigger: TATAGTGGTGCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTGGGGTCAGCCTGTGCAACAGTGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | GTTCTGAGCTTCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTaGTGTCTGGTGGCACAGTTCACTTGCCCCACAACCAACCAGCTT | + |
Preference number: 2 (lower is better) Translates to: VLSFMGFEVTQPYHF*CLVAQFTCPTTNQL Trigger: AAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAAGCTCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACCAAGGCCCACACATGTaGCCACAGAACACTGATCAT | + |
Preference number: 2 (lower is better) Translates to: GCSHPVSLGFLPDKRLLHQGPHM*PQNTDH Trigger: ATGATCAGTGTTCTGTGGGCACATGTGTGGGCCTTG...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTGGTTTGTATATGCTTaGCTCAGGAAGTGGCACTAT | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAWFVYA*LRKWHY Trigger: ATAGTGCCACTTCCTGAGCCAAGCATATACAAACCA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTGTGACTGCTTCCTATaGGGAAAGATGATGATTCTG | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRACDCFL*GKMMIL Trigger: CAGAATCATCATCTTTCCCCATAGGAAGCAGTCACA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | GGTTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTaGGCCCTGTTGCTGTGGACAGACCTGTGGTGGCACAGGAAGTCA | + |
Preference number: 2 (lower is better) Translates to: GLIWLMVYVVSDYSG*ALLLWTDLWWHRKS Trigger: TGACTTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCAGGCATGGCCTCTTGTaGTCCCAGCACTTCAGAGGG | + |
Preference number: 2 (lower is better) Translates to: KRKPSLGDLSTVLYAKGLRHGLL*SQHFRG Trigger: CCCTCTGAAGTGCTGGGATCACAAGAGGCCATGCCT...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | CTGTTCTTGGATACCAATGGGAGCCTGAGCCCCCATTTCCCTTCCTTAGCAATCGTGATTGCTGGGATTTaGACTCAGGACCTTTGGAAG | + |
Preference number: 2 (lower is better) Translates to: LFLDTNGSLSPHFPSLAIVIAGI*TQDLWK Trigger: CTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCAC...GATTGCTAAGGAAGGGAAATGGGGGCTCAGGCTCCCATTGGTATCCAAGAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAGCCTGTCCTGTGTCCTaGAGGCCAGCCTGGGTTATA | + |
Preference number: 2 (lower is better) Translates to: LKQGLTMLSNWSQTTGLQACPVS*RPAWVI Trigger: TATAACCCAGGCTGGCCTGCAGGACACAGGACAGGC...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGGTAGAGGAGCATTTTaGAGGGATTGCCCCACACTG | + |
Preference number: 2 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSGRGAF*RDCPTL Trigger: CAGTGTGGGGCAATCCCTGCAAAATGCTCCTCTACC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | CTGTTCTTGGATACCAATGGGAGCCTGAGCCCCCATTTCCCTTCCTTAGCAATCCCACCATGTGATTGCTaGGATTTGAACTCAGGACCT | + |
Preference number: 2 (lower is better) Translates to: LFLDTNGSLSPHFPSLAIPPCDC*DLNSGP Trigger: AGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGG...GATTGCTAAGGAAGGGAAATGGGGGCTCAGGCTCCCATTGGTATCCAAGAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGAGTCAGAACAGGGCACTaGGTTTCCCTGAGACTGGGG | + |
Preference number: 2 (lower is better) Translates to: HPDSSQMKYEDICSMLSGVRTGH*VSLRLG Trigger: CCCCAGTCTCAGGGAAACCCAGTGCCCTGTTCTGAC...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGCTACATGCTGGGTGGTaGTGGTGCACGTCTTTAATC | + |
Preference number: 2 (lower is better) Translates to: QTSGDTLVCVQEAETAGMLHAGW*WCTSLI Trigger: GATTAAAGACGTGCACCACCACCACCCAGCATGTAG...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAAGGGGTGCTGCTTACTaGCTTGCTCCCTGTGGCTTG | + |
Preference number: 2 (lower is better) Translates to: LKQGLTMLSNWSQTTGLQRGAAY*LAPCGL Trigger: CAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCT...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACCCATGGTCCTCTCAGTaGGGTGACATTTACATGTTC | + |
Preference number: 2 (lower is better) Translates to: GCSHPVSLGFLPDKRLLHPWSSQ*GDIYMF Trigger: GAACATGTAAATGTCACCCCACTGAGAGGACCATGG...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | TGGAAGGTAGAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTGGTaGCCTAGCATGCTGGAGACACTGACCTTCATACGTTTAACAAAA | + |
Preference number: 2 (lower is better) Translates to: WKVEAGGLWVASLEW*PSMLETLTFIRLTK Trigger: TTTTGTTAAACGTATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCTTACTGTCTCACACCTaGGGCCATCCTGAGCCACTG | + |
Preference number: 2 (lower is better) Translates to: KRKPSLGDLSTVLYAKGLLLSHT*GHPEPL Trigger: CAGTGGCTCAGGATGGCCTCAGGTGTGAGACAGTAA...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACTTAGCAGCCTTCAGATaGAGATGTAGAACTCTCAGC | + |
Preference number: 2 (lower is better) Translates to: GCSHPVSLGFLPDKRLLHLAAFR*RCRTLS Trigger: GCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAA...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACGTGATGGTTTGTATATaGTTGGCTCAGGAAGTGGCA | + |
Preference number: 2 (lower is better) Translates to: GCSHPVSLGFLPDKRLLHVMVCI*LAQEVA Trigger: TGCCACTTCCTGAGCCAAGCATATACAAACCATCAC...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGGGATTAAATATCTTTTaGAGGAAGGAATGTCCAGGA | + |
Preference number: 2 (lower is better) Translates to: IASNCWAASCLIAGVPRAGLNIF*RKECPG Trigger: TCCTGGACATTCCTTCCTGCAAAAGATATTTAATCC...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACCCCAACTTATATTCTTaGGATGATGGGACTGTGGTA | + |
Preference number: 2 (lower is better) Translates to: GCSHPVSLGFLPDKRLLHPNLYS*DDGTVV Trigger: TACCACAGTCCCATCATCTCAAGAATATAAGTTGGG...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGATTACCACTGAGGATTaGTTAGTGGAGCCAAGACAG | + |
Preference number: 2 (lower is better) Translates to: QTSGDTLVCVQEAETAGMITTED*LVEPRQ Trigger: CTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAAT...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAACAAACAGCCAAGTTTaGCCCCTTCCAGCCCATCTG | + |
Preference number: 2 (lower is better) Translates to: LKQGLTMLSNWSQTTGLQTNSQV*PLPAHL Trigger: CAGATGGGCTGGAAGGGGGCAAACTTGGCTGTTTGT...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATGTGGCTTGGCCCTGTTaGTGTGGACAGACCTGTGGT | + |
Preference number: 2 (lower is better) Translates to: LNMQTAFTAQVLIITTEDVAWPC*CGQTCG Trigger: ACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCAC...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATCCAATCCCACCAGTCTaGCTACCCAGCAAACCCTCC | + |
Preference number: 2 (lower is better) Translates to: LNMQTAFTAQVLIITTEDPIPPV*LPSKPS Trigger: GGAGGGTTTGCTGGGTAGCCAGACTGGTGGGATTGG...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | TGTAGCTGTACAGATGGTTGTAAGCCACCATGTGATTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACT | + |
Preference number: 2 (lower is better) Translates to: CSCTDGCKPPCDCWD*NSGPLEEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAACTGAGAGTGACTTTCTaGTCTTCCTGCCTCAACCTC | + |
Preference number: 2 (lower is better) Translates to: LKQGLTMLSNWSQTTGLQLRVTF*SSCLNL Trigger: GAGGTTGAGGCAGGAAGATCAGAAAGTCACTCTCAG...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | CTAAGCATTTCCAGTCAGGGACACTCAACTTACGAGTTTGGGAAATTTAGACATGGGATTAAAGGTGGGTaGCACCAACGCCAGGCCATA | + |
Preference number: 2 (lower is better) Translates to: LSISSQGHSTYEFGKFRHGIKGG*HQRQAI Trigger: TATGGCCTGGCGTTGGTGGCACCCACCTTTAATCCC...ATGTCTAAATTTCCCAAACTCGTAAGTTGAGTGTCCCTGACTGGAAATGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGAGGAAGGGGTTTCTTTaGCTTACCTTTCCACATCAT | + |
Preference number: 2 (lower is better) Translates to: QTSGDTLVCVQEAETAGMRKGFL*LTFPHH Trigger: ATGATGTGGAAAGGTAAGCCAAAGAAACCCCTTCCT...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACTCAATGCTTTCTGGATaGGAGGAGTTTACAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: GCSHPVSLGFLPDKRLLHSMLSG*EEFTRE Trigger: TTCTCTTGTAAACTCCTCCCATCCAGAAAGCATTGA...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTTGATGCAGAAGCCATaGAGGGGTGCTGCTTACTGG | + |
Preference number: 2 (lower is better) Translates to: LNMQTAFTAQVLIITTEDLMQKP*RGAAYW Trigger: CCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAA...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCCCTCAGCCTCTTGAGTaGCTAAAACCACAGATATGG | + |
Preference number: 2 (lower is better) Translates to: KRKPSLGDLSTVLYAKGLPQPLE*LKPQIW Trigger: CCATATCTGTGGTTTTAGCCACTCAAGAGGCTGAGG...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CCA 90 bp | AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCCACCATTATATTGTGTaGGATGTGGAGAGCTGTGGC | + |
Preference number: 2 (lower is better) Translates to: KRKPSLGDLSTVLYAKGLHHYIV*DVESCG Trigger: GCCACAGCTCTCCACATCCCACACAATATAATGGTG...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 90 bp | GAATGCATATGCCTTACTCAGGGTGAACTAGGGATTAAATATCTTTaGCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTGGCTGAACAC | + |
Preference number: 2 (lower is better) Translates to: ECICLTQGELGIKYL*QEGMSRKGSSLAEH Trigger: GTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGCAAAAGATATTTAATCCCTAGTTCACCCTGAGTAAGGCATATGCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | CAGTCAGGAAGCAGTTCTGCCCTAAGCATTTCCAGTCAGGGACACTCAACTTACATTAAATATGATCTGTaGCAGGTGAGAACGTACTCA | + |
Preference number: 2 (lower is better) Translates to: QSGSSSALSISSQGHSTYIKYDL*QVRTYS Trigger: TGAGTACGTTCTCACCTGTCACAGATCATATTTAAT...GTAAGTTGAGTGTCCCTGACTGGAAATGCTTAGGGCAGAACTGCTTCCTGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR TCA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATCTATCAGACACTCTGTaGTGTCTGGACCTGGAAGTG | + |
Preference number: 2 (lower is better) Translates to: LNMQTAFTAQVLIITTEDLSDTL*CLDLEV Trigger: CACTTCCAGGTCCAGACATCACAGAGTGTCTGATAG...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR GCA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTAGAACCAACTCCTTTTaGTTTTGGTTTCCGTCACTA | + |
Preference number: 2 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSRTNSF*FWFPSL Trigger: TAGTGACGGAAACCAAAAGCAAAAGGAGTTGGTTCT...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR GCA 90 bp | TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAACGAGTCTCCCTCCTCTaGCTCTTTCTTTCAAATGAA | + |
Preference number: 2 (lower is better) Translates to: LKQGLTMLSNWSQTTGLQRVSLL*LFLSNE Trigger: TTCATTTGAAAGAAAGAGGCAGAGGAGGGAGACTCG...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CCA 90 bp | CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGAAACAAGCCAGGAATCTaGAGGAAGTTGATGCAGAAG | + |
Preference number: 2 (lower is better) Translates to: HPDSSQMKYEDICSMLSGNKPGI*RKLMQK Trigger: CTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTT...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CCA 90 bp | TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAACTGCTCAATGCTTTCTaGATGGGAGGAGTTTACAAG | + |
Preference number: 2 (lower is better) Translates to: LKQGLTMLSNWSQTTGLQLLNAF*MGGVYK Trigger: CTTGTAAACTCCTCCCATCCAGAAAGCATTGAGCAG...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR TCA 90 bp | TGCATTTCAGTCTCTCAGCAAGGTTTTATAATTCTCACACCTCAACATGCAGACGCCATCCTGAGCCACTaGGTAAGTCTGTCTCAAAAA | + |
Preference number: 2 (lower is better) Translates to: CISVSQQGFIILTPQHADAILSH*VSLSQK Trigger: TTTTTGAGACAGACTTACTCAGTGGCTCAGGATGGC...GTCTGCATGTTGAGGTGTGAGAATTATAAAACCTTGCTGAGAGACTGAAATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR TCA 90 bp | CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGAGCCAGCAGAGTGTACTaGACTTCCAAAAAGAAAAGA | + |
Preference number: 2 (lower is better) Translates to: HPDSSQMKYEDICSMLSGASRVY*TSKKKR Trigger: TCTTTTCTTTTTGGAAGTTCAGTACACTCTGCTGGC...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR TCA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTATTAATTATTACCACTaGGGATTGATTAGTGGAGCC | + |
Preference number: 2 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSINYYH*GLISGA Trigger: GGCTCCACTAATCAATCCTCAGTGGTAATAATTAAT...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR GCA 90 bp | TGCATTTCAGTCTCTCAGCAAGGTTTTATAATTCTCACACCTCAACATGCAGACAAAGCCAAGCCTTCTTaGTTCCTCCTTCTTCCTGTC | + |
Preference number: 2 (lower is better) Translates to: CISVSQQGFIILTPQHADKAKPS*FLLLPV Trigger: GACAGGAAGAAGGAGGAAGCAAGAAGGCTTGGCTTT...GTCTGCATGTTGAGGTGTGAGAATTATAAAACCTTGCTGAGAGACTGAAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CCA 90 bp | TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAAAATCAGATGATCTGTaGAAGCTTTCTGTTGTGTGG | + |
Preference number: 2 (lower is better) Translates to: LKQGLTMLSNWSQTTGLQKSDDL*KLSVVW Trigger: CCACACAACAGAAAGCTTCCACAGATCATCTGATTT...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CCA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATATTAATAATAGCAAGTaGGGGTGGAAAAGCCAAGCC | + |
Preference number: 2 (lower is better) Translates to: LNMQTAFTAQVLIITTEDINNSK*GWKSQA Trigger: GGCTTGGCTTTTCCACCCCCACTTGCTATTATTAAT...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CCA 90 bp | AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCACAAACTGCACTTCATaGAATCTTCTGGAATTTATC | + |
Preference number: 2 (lower is better) Translates to: KRKPSLGDLSTVLYAKGLTNCTS*NLLEFI Trigger: GATAAATTCCAGAAGATTCCATGAAGTGCAGTTTGT...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR TCA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTCCTTACAGTATCTTTaGCACTCACTTATTAACACG | + |
Preference number: 2 (lower is better) Translates to: LNMQTAFTAQVLIITTEDSLQYL*HSLINT Trigger: CGTGTTAATAAGTGAGTGTCAAAGATACTGTAAGGA...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CCA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATAGGAGAGGTTTAATTTaGCTCATGGTTTATGTGGTT | + |
Preference number: 2 (lower is better) Translates to: LNMQTAFTAQVLIITTEDRRGLI*LMVYVV Trigger: AACCACATAAACCATGAGCCAAATTAAACCTCTCCT...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | AACCACAGGGTGGACTCGGCCAAGGGAGGCATGGCCTaGCCAACGACCACCACTGGAGCCACTCCCACCTCA | + |
Preference number: 3 (lower is better) Translates to: NHRVDSAKGGMA*PTTTTGATPTS Trigger: TGAGGTGGGAGTGGCTCCAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | ACCCATCAGGGAGAAGAGGCCAGGTACTCTGGGGACTaGAGCCTGTCCTGTGTCCTGCAGGCCAGCCTGGGT | + |
Preference number: 3 (lower is better) Translates to: THQGEEARYSGD*SLSCVLQASLG Trigger: ACCCAGGCTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | GGTGCAAGCTCTCAGCTACTGCCCCAGCACCATCCCTaGCTGCCTGCCTGCCTGCCTGCCTCCCACTATGTT | + |
Preference number: 3 (lower is better) Translates to: GASSQLLPQHHP*LPACLPASHYV Trigger: AACATAGTGGGAGGCAGGCAGGCAGGCAGGCAGGCAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | TTCCAAACCACAGGGTGGACTCGGCCAAGGGAGGCATaGCCTGACCAACGACCACCACTGGAGCCACTCCCA | + |
Preference number: 3 (lower is better) Translates to: FQTTGWTRPREA*PDQRPPLEPLP Trigger: TGGGAGTGGCTCCAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTTTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | CGGTCCCTGAGGCTAGGTGCCTTGGCAGATCCAACCTaGTCCTGCACACCTACAGGATTCCTGGAGAGCCGC | + |
Preference number: 3 (lower is better) Translates to: RSLRLGALADPT*SCTPTGFLESR Trigger: GCGGCTCTCCAGGAATCCTGTAGGTGTGCAGGACCAGGTTGGATCTGCCAAGGCACCTAGCCTCAGGGACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | GACCTAAACTGGACCAGCAGCCAGACTGGCAAAGAGTaGGCGGCCTGGCTCCAGTGCCCAGTACCACGAAGC | + |
Preference number: 3 (lower is better) Translates to: DLNWTSSQTGKE*AAWLQCPVPRS Trigger: GCTTCGTGGTACTGGGCACTGGAGCCAGGCCGCTCACTCTTTGCCAGTCTGGCTGCTGGTCCAGTTTAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | CCAGGCTGCCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGGGTGCCAC | + |
Preference number: 3 (lower is better) Translates to: PGCPRTQKSACL*LPSAGIKGGCH Trigger: GTGGCACCCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGGCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | GGGGAAGAGAGACCTAAACTGGACCAGCAGCCAGACTaGCAAAGAGTGAGCGGCCTGGCTCCAGTGCCCAGT | + |
Preference number: 3 (lower is better) Translates to: GEERPKLDQQPD*QRVSGLAPVPS Trigger: ACTGGGCACTGGAGCCAGGCCGCTCACTCTTTGCCAGTCTGGCTGCTGGTCCAGTTTAGGTCTCTCTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | AGCAATCACCCATCAGGGAGAAGAGGCCAGGTACTCTaGGGACTGCAGCCTGTCCTGTGTCCTGCAGGCCAG | + |
Preference number: 3 (lower is better) Translates to: SNHPSGRRGQVL*GLQPVLCPAGQ Trigger: CTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGTGATTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | CTGTGGCTCCCCGTCTCCTGTGTACACAGGCATCACTaGTGTACCACTGGGAGTCTGGAACGGGGATCCTCA | + |
Preference number: 3 (lower is better) Translates to: LWLPVSCVHRHH*CTTGSLERGSS Trigger: TGAGGATCCCCGTTCCAGACTCCCAGTGGTACAGCAGTGATGCCTGTGTACACAGGAGACGGGGAGCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | ACGAAGCGGGCGTGGGTCCAGGTGTGGGTGCTCTCCTaGGCAGAGGGATGGGTTAAGTCGTATTGTGAGTAC | + |
Preference number: 3 (lower is better) Translates to: TKRAWVQVWVLS*AEGWVKSYCEY Trigger: GTACTCACAATACGACTTAACCCATCCCTCTGCTCAGGAGAGCACCCACACCTGGACCCACGCCCGCTTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | CAGGAAGTCATGGTAGGCACAGTGACAGAGCAGAGCTaGTCACTCGGCCAGGCATGGCCTCTTGTGATCCCA | + |
Preference number: 3 (lower is better) Translates to: QEVMVGTVTEQS*SLGQAWPLVIP Trigger: TGGGATCACAAGAGGCCATGCCTGGCCGAGTGAGCAGCTCTGCTCTGTCACTGTGCCTACCATGACTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | TGTAGACCAGGCTGCCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGGG | + |
Preference number: 3 (lower is better) Translates to: CRPGCPRTQKSA*LCLPSAGIKGG Trigger: CCCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGGCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | CTGGAGGAAGTTGATGCAGAAGCCATGGAGGGGTGCTaGTTACTGGCTTGCTCCCTGTGGCTTGCTCAGCTT | + |
Preference number: 3 (lower is better) Translates to: LEEVDAEAMEGC*LLACSLWLAQL Trigger: AAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | TCAAGGATGATTGCTAGCAACTGTTGGGCTGCATCCTaGCTCATTGCTGGGGTGCCTAGAGCGGCTGGCATG | + |
Preference number: 3 (lower is better) Translates to: SRMIASNCWAAS*LIAGVPRAAGM Trigger: CATGCCAGCCGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | GACTGCGGCTTGGGCATACGCCTCAATCTCAGCACCTaGAAGGTAGAGGCAGGAGGATTGTGGGTAGCAAGT | + |
Preference number: 3 (lower is better) Translates to: DCGLGIRLNLST*KVEAGGLWVAS Trigger: ACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCAGGTGCTGAGATTGAGGCGTATGCCCAAGCCGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | ACAGTGACAGAGCAGAGCTGCTCACTCGGCCAGGCATaGCCTCTTGTGATCCCAGCACTTCAGAGGGTTACT | + |
Preference number: 3 (lower is better) Translates to: TVTEQSCSLGQA*PLVIPALQRVT Trigger: AGTAACCCTCTGAAGTGCTGGGATCACAAGAGGCCATGCCTGGCCGAGTGAGCAGCTCTGCTCTGTCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | AAGCCAGGAATCTGGAGGAAGTTGATGCAGAAGCCATaGAGGGGTGCTGCTTACTGGCTTGCTCCCTGTGGC | + |
Preference number: 3 (lower is better) Translates to: KPGIWRKLMQKP*RGAAYWLAPCG Trigger: GCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CAA 90 bp | AGTGTGTCAACTTCCTCACAGGCCCCACCTAAGACCGCCTCTCCTGCTTCAGCATCCTGGAACCAGGGTTaGAAACCCAGCATGATCCTG | + |
Preference number: 3 (lower is better) Translates to: SVSTSSQAPPKTASPASASWNQG*KPSMIL Trigger: CAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGA...TGCTGAAGCAGGAGAGGCGGTCTTAGGTGGGGCCTGTGAGGAAGTTGACACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | AATCTGGAGGAAGTTGATGCAGAAGCCATGGAGGGGTaGTGCTTACTGGCTTGCTCCCTGTGGCTTGCTCAG | + |
Preference number: 3 (lower is better) Translates to: NLEEVDAEAMEG*CLLACSLWLAQ Trigger: CTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | ATTGTAGCCCAGTTGGCTCTGGACTGGAGCTTCCTCTaGCTCGGCCTTAGTTACCACCTTGCTGGGAGGTAT | + |
Preference number: 3 (lower is better) Translates to: IVAQLALDWSFL*LGLSYHLAGRY Trigger: ATACCTCCCAGCAAGGTGGTAACTAAGGCCGAGGCAGAGGAAGCTCCAGTCCAGAGCCAACTGGGCTACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | GTGTTCTTTCTTCTCTCTGCCTCACATAGACCACGGTaGAAGCTCTCAGCTACTGCCCCAGCACCATCCCTG | + |
Preference number: 3 (lower is better) Translates to: VFFLLSASHRPR*KLSATAPAPSL Trigger: CAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACCGTGGTCTATGTGAGGCAGAGAGAAGAAAGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | ACAGCAACCCAAACAAGCCAGGAATCTGGAGGAAGTTaGTGCAGAAGCCATGGAGGGGTGCTGCTTACTGGC | + |
Preference number: 3 (lower is better) Translates to: TATQTSQESGGS*CRSHGGVLLTG Trigger: GCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTTTGGGTTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | TCTCCCACCTGTAAGAGAACCATGGCAGTCACTTCCTaGAACCAGGGTTTGAAACCCAGCATGATCCTGCCC | + |
Preference number: 3 (lower is better) Translates to: SPTCKRTMAVTS*NQGLKPSMILP Trigger: GGGCAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCATGGTTCTCTTACAGGTGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | GGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTaGCCCTGTTGCTGTGGACAGACCTGTGGTGGCACA | + |
Preference number: 3 (lower is better) Translates to: GSWFMWFRITVA*PCCCGQTCGGT Trigger: TGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | AAGTTGATGCAGAAGCCATGGAGGGGTGCTGCTTACTaGCTTGCTCCCTGTGGCTTGCTCAGCTTGCTTTCT | + |
Preference number: 3 (lower is better) Translates to: KLMQKPWRGAAY*LAPCGLLSLLS Trigger: AGAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | GGAAGTCAGGACAGCAACCCAAACAAGCCAGGAATCTaGAGGAAGTTGATGCAGAAGCCATGGAGGGGTGCT | + |
Preference number: 3 (lower is better) Translates to: GSQDSNPNKPGI*RKLMQKPWRGA Trigger: AGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTTTGGGTTGCTGTCCTGACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CAA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTAGTGGCTTGGCCCTGTaGCTGTGGACAGACCTGTGG | + |
Preference number: 3 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSSGLAL*LWTDLW Trigger: CCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACT...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | CAGGGATCTGGAGGTCAAGACACCAAGTCACTTCTGTaGGAACTAGAGTGTCCCACACTTGACAGTGGGACG | + |
Preference number: 3 (lower is better) Translates to: QGSGGQDTKSLL*ELECPTLDSGT Trigger: CGTCCCACTGTCAAGTGTGGGACACTCTAGTTCTCACAGAAGTGACTTGGTGTCTTGACCTCCAGATCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | TCAAGCCCCCATGCTTGCAGGGCAGACACTACAAACTaGGCCACCTCCCCAGCCCAACTTATATTCTTGAGA | + |
Preference number: 3 (lower is better) Translates to: SSPHACRADTTN*ATSPAQLIFLR Trigger: TCTCAAGAATATAAGTTGGGCTGGGGAGGTGGCTCAGTTTGTAGTGTCTGCCCTGCAAGCATGGGGGCTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | AAGGAGGATCGAATCCAGGACTTTGAATGCGCTAGGTaGAACACCATGGCCAAAGGCAAGCGGGAAGGAAGG | + |
Preference number: 3 (lower is better) Translates to: KEDRIQDFECAR*NTMAKGKREGR Trigger: CCTTCCTTCCCGCTTGCCTTTGGCCATGGTGTTTCACCTAGCGCATTCAAAGTCCTGGATTCGATCCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | GGCCCCAAACTGTCTATGCAGCTGAGAGTGACTTTCTaGTCTTCCTGCCTCAACCTCCTGAGAGGTGTGTGT | + |
Preference number: 3 (lower is better) Translates to: GPKLSMQLRVTF*SSCLNLLRGVC Trigger: ACACACACCTCTCAGGAGGTTGAGGCAGGAAGATCAGAAAGTCACTCTCAGCTGCATAGACAGTTTGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | CCAAGCCAGGCCAGTGACCTTCCTTGTGCCAGGAAGTaGTGCCCATATTTAGAGATGGGTCTTCCCATACCA | + |
Preference number: 3 (lower is better) Translates to: PSQASDLPCARK*CPYLEMGLPIP Trigger: TGGTATGGGAAGACCCATCTCTAAATATGGGCATCACTTCCTGGCACAAGGAAGGTCACTGGCCTGGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | TTTTTGGTTCTTGTGTGTTGCCACAGTCCCACCCTCTaGCCCTTACATCGAGTCTCCCTCCTCTGCCTCTTT | + |
Preference number: 3 (lower is better) Translates to: FLVLVCCHSPTL*PLHRVSLLCLF Trigger: AAAGAGGCAGAGGAGGGAGACTCGATGTAAGGGGCAGAGGGTGGGACTGTGGCAACACACAAGAACCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR GCA 72 bp | AATGCATGTCCCCTGTCAGCTCTCTGCTGTACTCTGTaGCAGGGATCTGGAGGTCAAGACACCAAGTCACTT | + |
Preference number: 3 (lower is better) Translates to: NACPLSALCCTL*QGSGGQDTKSL Trigger: AAGTGACTTGGTGTCTTGACCTCCAGATCCCTGGCACAGAGTACAGCAGAGAGCTGACAGGGGACATGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | GTAGAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTaGTTGCCTAGCATGCTGGAGACACTGACCTTCATA | + |
Preference number: 3 (lower is better) Translates to: VEAGGLWVASLE*LPSMLETLTFI Trigger: TATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | CCTGTCAGCTCTCTGCTGTACTCTGTGCCAGGGATCTaGAGGTCAAGACACCAAGTCACTTCTGTGAGAACT | + |
Preference number: 3 (lower is better) Translates to: PVSSLLYSVPGI*RSRHQVTSVRT Trigger: AGTTCTCACAGAAGTGACTTGGTGTCTTGACCTCCAGATCCCTGGCACAGAGTACAGCAGAGAGCTGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CCA 72 bp | GCCATGGAGGGGTGCTGCTTACTGGCTTGCTCCCTGTaGCTTGCTCAGCTTGCTTTCTTATACAATCCTAAC | + |
Preference number: 3 (lower is better) Translates to: AMEGCCLLACSL*LAQLAFLYNPN Trigger: GTTAGGATTGTATAAGAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | GGTTTGAGGTCACTCAACCTTACCACTTCTTGTGTCTaGTGGCACAGTTCACTTGCCCCACAACCAACCAGC | + |
Preference number: 3 (lower is better) Translates to: GLRSLNLTTSCV*WHSSLAPQPTS Trigger: GCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | TGGCTTCGAAAGTCAAGGATGATTGCTAGCAACTGTTaGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGA | + |
Preference number: 3 (lower is better) Translates to: WLRKSRMIASNC*AASCLIAGVPR Trigger: TCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGACTTTCGAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | CAGTCAGGAAGCAGTTCTGCCCTAAGCATTTCCAGTCAGGGACACTCAACTTACAACAAACAGCCAAGTTaGCCCCCTTCCAGCCCATCT | + |
Preference number: 3 (lower is better) Translates to: QSGSSSALSISSQGHSTYNKQPS*PPSSPS Trigger: AGATGGGCTGGAAGGGGGCAAACTTGGCTGTTTGTT...GTAAGTTGAGTGTCCCTGACTGGAAATGCTTAGGGCAGAACTGCTTCCTGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | CTGGCTCCACACCTCAGTTCTGAGCTTCATGGGGTTTaGGGTCACTCAACCTTACCACTTCTTGTGTCTGGT | + |
Preference number: 3 (lower is better) Translates to: LAPHLSSELHGV*GHSTLPLLVSG Trigger: ACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAAGCTCAGAACTGAGGTGTGGAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | GATGAAGATGTAGAACTCTCAGCTCTACCTGCACCATaGCTGCCTAGATGTTGCCCCACTCACACCTTGATG | + |
Preference number: 3 (lower is better) Translates to: DEDVELSALPAP*LPRCCPTHTLM Trigger: CATCAAGGTGTGAGTGGGGCAACATCTAGGCAGGCATGGTGCAGGTAGAGCTGAGAGTTCTACATCTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | TGGCACAGTTCACTTGCCCCACAACCAACCAGCTTCTaGTATGGGCACAGATTCCTCAAAAGTGAAGGCCTT | + |
Preference number: 3 (lower is better) Translates to: WHSSLAPQPTSF*YGHRFLKSEGL Trigger: AAGGCCTTCACTTTTGAGGAATCTGTGCCCATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | GAATCCAGGACTTTGAATGCGCTAGGTGAAACACCATaGCCAAAGGCAAGCGGGAAGGAAGGGGTTTCTTTG | + |
Preference number: 3 (lower is better) Translates to: ESRTLNALGETP*PKASGKEGVSL Trigger: CAAAGAAACCCCTTCCTTCCCGCTTGCCTTTGGCCATGGTGTTTCACCTAGCGCATTCAAAGTCCTGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | TTGAGGTCACTCAACCTTACCACTTCTTGTGTCTGGTaGCACAGTTCACTTGCCCCACAACCAACCAGCTTC | + |
Preference number: 3 (lower is better) Translates to: LRSLNLTTSCVW*HSSLAPQPTSF Trigger: GAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | CTTGTCACTAAACCCAGTGCTCACCAATCCCACCAGTCTGGCTACCCAGCAAACCAGAACCAACTCCTTTaGCTTTTGGTTTCCGTCACT | + |
Preference number: 3 (lower is better) Translates to: LVTKPSAHQSHQSGYPANQNQLL*LLVSVT Trigger: AGTGACGGAAACCAAAAGCAAAAGGAGTTGGTTCTG...GTTTGCTGGGTAGCCAGACTGGTGGGATTGGTGAGCACTGGGTTTAGTGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | GTCACGGTGCCACCCAGACTCTTCTCAGATGAAGTATaGAGACATCTGCTCAATGCTTTCTGGATGGGAGGA | + |
Preference number: 3 (lower is better) Translates to: VTVPPRLFSDEV*RHLLNAFWMGG Trigger: TCCTCCCATCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTGGCACCGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | GCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTGGCTaGACACTAGGGGCCTATCTAGAGACTTCATTAGCA | + |
Preference number: 3 (lower is better) Translates to: AGRNVQEGKLIG*TLGAYLETSLA Trigger: TGCTAATGAAGTCTCTAGATAGGCCCCTAGTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | CGTGAGAATGCTTGGTCCCCAGTTGGTGGAACTGTTTaGAGGATTAGGAATGTGGGCTTGTTGGAAGAGGAC | + |
Preference number: 3 (lower is better) Translates to: RENAWSPVGGTV*RIRNVGLLEED Trigger: GTCCTCTTCCAACAAGCCCACATTCCTAATCCTTCAAACAGTTCCACCAACTGGGGACCAAGCATTCTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | GATGATGATTCTGGGGAATGTACTAAGTCTGGGGTCTaGAGGGATATCCAGGTGAGATGCAGACTCTCCATG | + |
Preference number: 3 (lower is better) Translates to: DDDSGECTKSGV*RDIQVRCRLSM Trigger: CATGGAGAGTCTGCATCTCACCTGGATATCCCTGCAGACCCCAGACTTAGTACATTCCCCAGAATCATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | AATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTaGCTTGGCCCTGTTGCTGTGGACAGACCTGTGGTG | + |
Preference number: 3 (lower is better) Translates to: NLAHGLCGFGLQ*LGPVAVDRPVV Trigger: CACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | CATGGCCAAAGGCAAGCGGGAAGGAAGGGGTTTCTTTaGCTTACCTTTCCACATCATAGTCCATCACCAAAG | + |
Preference number: 3 (lower is better) Translates to: HGQRQAGRKGFL*LTFPHHSPSPK Trigger: CTTTGGTGATGGACTATGATGTGGAAAGGTAAGCCAAAGAAACCCCTTCCTTCCCGCTTGCCTTTGGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | TTACATGTTCCAAAGCAGGTAGAGTTTGGCAGGACCTaGCTCCACACCTCAGTTCTGAGCTTCATGGGGTTT | + |
Preference number: 3 (lower is better) Translates to: LHVPKQVEFGRT*LHTSVLSFMGF Trigger: AAACCCCATGAAGCTCAGAACTGAGGTGTGGAGCCAGGTCCTGCCAAACTCTACCTGCTTTGGAACATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | AGCATGGAGAACATCAGGTTTTTAATGCTACGTGGCTaGCTGCCATGGTCCTCTCAGTGGGGTGACATTTAC | + |
Preference number: 3 (lower is better) Translates to: SMENIRFLMLRG*LPWSSQWGDIY Trigger: GTAAATGTCACCCCACTGAGAGGACCATGGCAGCCAGCCACGTAGCATTAAAAACCTGATGTTCTCCATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCGTAGAGGCAGGAGGATaGTGGGTAGCAAGTCTGGAG | + |
Preference number: 3 (lower is better) Translates to: KRKPSLGDLSTVLYAKGLVEAGG*WVASLE Trigger: CTCCAGACTTGCTACCCACAATCCTCCTGCCTCTAC...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | CAAGTCACTTCTGTGAGAACTAGAGTGTCCCACACTTaGCAGTGGGACGTGTCTGTTCTTGGATACCAATGG | + |
Preference number: 3 (lower is better) Translates to: QVTSVRTRVSHT*QWDVSVLGYQW Trigger: CCATTGGTATCCAAGAACAGACACGTCCCACTGTCAAGTGTGGGACACTCTAGTTCTCACAGAAGTGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | CAAACTGAGCCACCTCCCCAGCCCAACTTATATTCTTaGGATGATGGGACTGTGGTAGAGGAGCATTTTGCA | + |
Preference number: 3 (lower is better) Translates to: QTEPPPQPNLYS*DDGTVVEEHFA Trigger: TGCAAAATGCTCCTCTACCACAGTCCCATCATCTCAAGAATATAAGTTGGGCTGGGGAGGTGGCTCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | AACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTaGAACTGCAGGCATGCACCACTATACCACAGCTAT | + |
Preference number: 3 (lower is better) Translates to: NFWRYSCLRPGS*NCRHAPLYHSY Trigger: ATAGCTGTGGTATAGTGGTGCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | CAAACATCTGAGGAAACTGGCTTCGAAAGTCAAGGATaGTTGCTAGCAACTGTTGGGCTGCATCCTGCCTCA | + |
Preference number: 3 (lower is better) Translates to: QTSEETGFESQG*LLATVGLHPAS Trigger: TGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGACTTTCGAAGCCAGTTTCCTCAGATGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | GGTTTGTATATGCTTGGCTCAGGAAGTGGCACTATTTaGAGGTGTAGCCTCATTGGACTAGGTGTGTCACTG | + |
Preference number: 3 (lower is better) Translates to: GLYMLGSGSGTI*RCSLIGLGVSL Trigger: CAGTGACACACCTAGTCCAATGAGGCTACACCTCCAAATAGTGCCACTTCCTGAGCCAAGCATATACAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | TGCTTCCTCCTTCTTCCTGTCTTGTGTATCCTAGACTaGCCCCAAACTGTCTATGCAGCTGAGAGTGACTTT | + |
Preference number: 3 (lower is better) Translates to: CFLLLPVLCILD*PQTVYAAESDF Trigger: AAAGTCACTCTCAGCTGCATAGACAGTTTGGGGCCAGTCTAGGATACACAAGACAGGAAGAAGGAGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | CTGCCTCAGCCTCTTGAGTGGCTAAAACCACAGATATaGGTCACCAGTACCCAGATTGTTTTCTTCTTGCTC | + |
Preference number: 3 (lower is better) Translates to: LPQPLEWLKPQI*VTSTQIVFFLL Trigger: GAGCAAGAAGAAAACAATCTGGGTACTGGTGACCCATATCTGTGGTTTTAGCCACTCAAGAGGCTGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | CTTCCATTGAAACAGGGTCTTACCATGTTATCCAACTaGTCTCAAACTACTGGGCTCCAACGATCCTGCTGC | + |
Preference number: 3 (lower is better) Translates to: LPLKQGLTMLSN*SQTTGLQRSCC Trigger: GCAGCAGGATCGTTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAATGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | CAGTCCCAGTCTAAATCAGATGATCTGTGGAAGCTTTCTGTTGTGTGGAAGCTTTTTGGTTCTTGTGTGTaGCCACAGTCCCACCCTCTG | + |
Preference number: 3 (lower is better) Translates to: QSQSKSDDLWKLSVVWKLFGSCV*PQSHPL Trigger: CAGAGGGTGGGACTGTGGCAACACACAAGAACCAAA...AAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGACTGGGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGTGTGGCTTGCTCAGCTaGCTTTCTTATACAATCCTA | + |
Preference number: 3 (lower is better) Translates to: QTSGDTLVCVQEAETAGMCGLLS*LSYTIL Trigger: TAGGATTGTATAAGAAAGCAAGCTGAGCAAGCCACA...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | CCCCTAGTCGTGTTAAGGGAACAATTCAGGGCCTTGTaGATGCTAGACAAGCACAACACTACTAAGTCACAC | + |
Preference number: 3 (lower is better) Translates to: PLVVLREQFRAL*MLDKHNTTKSH Trigger: GTGTGACTTAGTAGTGTTGTGCTTGTCTAGCATTCACAAGGCCCTGAATTGTTCCCTTAACACGACTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | ATGAAACATAAAGTAAGGCCACATTTGAGGAGTCAGTaGAATGGCCCGGAGGGTAAAGGTTCCTGCCACCAA | + |
Preference number: 3 (lower is better) Translates to: MKHKVRPHLRSQ*NGPEGKGSCHQ Trigger: TTGGTGGCAGGAACCTTTACCCTCCGGGCCATTTCACTGACTCCTCAAATGTGGCCTTACTTTATGTTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | TACCTGGAAGTCAGTCTTCCATTAGCAGCCTTCAGATaGAGATGTAGAACTCTCAGCTCTACCTGCACCATG | + |
Preference number: 3 (lower is better) Translates to: YLEVSLPLAAFR*RCRTLSSTCTM Trigger: CATGGTGCAGGTAGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAATGGAAGACTGACTTCCAGGTA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | TGTAGCTGTACAGATGGTTGTAAGCCACCATGTGATTaGTGGGATTTGAACTCAGGACCTTTGGAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: CSCTDGCKPPCD*WDLNSGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | TTGATTAGTGGAGCCAAGACAGATACAAGGTCACGGTaGCACCCAGACTCTTCTCAGATGAAGTATGAAGAC | + |
Preference number: 3 (lower is better) Translates to: LISGAKTDTRSR*HPDSSQMKYED Trigger: GTCTTCATACTTCATCTGAGAAGAGTCTGGGTGGCACCGTGACCTTGTATCTGTCTTGGCTCCACTAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | AGCTGTACAGATGGTTGTAAGCCACCATGTGATTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA | + |
Preference number: 3 (lower is better) Translates to: SCTDGCKPPCDC*DLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | AACATCAGGTTTTTAATGCTACGTGGCTGGCTGCCATaGTCCTCTCAGTGGGGTGACATTTACATGTTCCAA | + |
Preference number: 3 (lower is better) Translates to: NIRFLMLRGWLP*SSQWGDIYMFQ Trigger: TTGGAACATGTAAATGTCACCCCACTGAGAGGACCATGGCAGCCAGCCACGTAGCATTAAAAACCTGATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATACCTCAGTCTGTCTTTaGGCTGCCACCTTGCCAACT | + |
Preference number: 3 (lower is better) Translates to: LNMQTAFTAQVLIITTEDTSVCL*AATLPT Trigger: AGTTGGCAAGGTGGCAGCCAAAAGACAGACTGAGGT...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | TGCATTTCAGTCTCTCAGCAAGGTTTTATAATTCTCACACCTCAACATGCAGACCTCCTTCTTCCTGTCTaGTGTATCCTAGACTGGCCC | + |
Preference number: 3 (lower is better) Translates to: CISVSQQGFIILTPQHADLLLPV*CILDWP Trigger: GGGCCAGTCTAGGATACACAAGACAGGAAGAAGGAG...GTCTGCATGTTGAGGTGTGAGAATTATAAAACCTTGCTGAGAGACTGAAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | GTCACATGTATTCTAATTACCCATCCCCCTACAACCTaGAGATTGCTTCTGCCGATCTCACGGTTCCTAGTT | + |
Preference number: 3 (lower is better) Translates to: VTCILITHPPTT*RLLLPISRFLV Trigger: AACTAGGAACCGTGAGATCGGCAGAAGCAATCTTCAGGTTGTAGGGGGATGGGTAATTAGAATACATGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | GTAACACGCACATATACAACAGTCAGGAAGCAGTTCTaGCCTAAGCATTTCCAGTCAGGGACACTCAACTTA | + |
Preference number: 3 (lower is better) Translates to: VTRTYTTVRKQF*PKHFQSGTLNL Trigger: TAAGTTGAGTGTCCCTGACTGGAAATGCTTAGGGCAGAACTGCTTCCTGACTGTTGTATATGTGCGTGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | GCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTATaGCAGTTAGCATGCTTATTTGAGGCCTTGCACAAT | + |
Preference number: 3 (lower is better) Translates to: AYYFRAFKVGEV*QLACLFEALHN Trigger: ATTGTGCAAGGCCTCAAATAAGCATGCTAACTGCCATACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTaGTCAATGCTTTCTGGATGGGAGGAGTTTACAAGA | + |
Preference number: 3 (lower is better) Translates to: HPDSSQMKYEDI*SMLSGWEEFTR Trigger: TCTTGTAAACTCCTCCCATCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | AGTAGAAAGACCACGTTTTTGTTGATGTTCCTGTTTTaGAGGCATGGTCCTGTTATTGTAGCCCAGTTGGCT | + |
Preference number: 3 (lower is better) Translates to: SRKTTFLLMFLF*RHGPVIVAQLA Trigger: AGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAGGAACATCAACAAAAACGTGGTCTTTCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | GTTATTACAGGTAACTGCTATCACACCAGTCAGTGGTaGCACATACCATTAATCCCAGCATACCAAAGGCAA | + |
Preference number: 3 (lower is better) Translates to: VITGNCYHTSQW*HIPLIPAYQRQ Trigger: TTGCCTTTGGTATGCTGGGATTAATGGTATGTGCCACCACTGACTGGTGTGATAGCAGTTACCTGTAATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGTTGGGCACACAAATTaGAAGCAATTTGAAGTTTGT | + |
Preference number: 3 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSVGHTN*KQFEVC Trigger: ACAAACTTCAAATTGCTTCAAATTTGTGTGCCCAAC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | AACCAGCTTCTGCTATGGGCACAGATTCCTCAAAAGTaGAGGCCTTTTCAAACTACCCACCATTATATTGTG | + |
Preference number: 3 (lower is better) Translates to: NQLLLWAQIPQK*RPFQTTHHYIV Trigger: CACAATATAATGGTGGGTAGTTTGAAAAGGCCTTCACTTTTGAGGAATCTGTGCCCATAGCAGAAGCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR-3UTR CAA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTGTGATTGCTGGGATTaGAACTCAGGACCTTTGGAA | + |
Preference number: 3 (lower is better) Translates to: LNMQTAFTAQVLIITTEDCDCWD*NSGPLE Trigger: TTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACA...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | TTTACAGCCCAGGTATTAATTATTACCACTGAGGATTaGTTAGTGGAGCCAAGACAGATACAAGGTCACGGT | + |
Preference number: 3 (lower is better) Translates to: FTAQVLIITTED*LVEPRQIQGHG Trigger: ACCGTGACCTTGTATCTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | GACTGCTTTTACAGCCCAGGTATTAATTATTACCACTaGGGATTGATTAGTGGAGCCAAGACAGATACAAGG | + |
Preference number: 3 (lower is better) Translates to: DCFYSPGINYYH*GLISGAKTDTR Trigger: CCTTGTATCTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR TCA 72 bp | CCTTGGTCATGGTGTTCTGTTATGCCGGGAGAAAAGTaGCTAAGAAACACAGATCATCATCATCATCATCAT | + |
Preference number: 3 (lower is better) Translates to: PWSWCSVMPGEK*LRNTDHHHHHH Trigger: ATGATGATGATGATGATGATCTGTGTTTCTTAGTCACTTTTCTCCCGGCATAACAGAACACCATGACCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR GCA 72 bp | AGCCAGCCCCAGTTAAATGTTGTCCTTTATAAGACTTaGCTTGATCATGTATCTGTTCACAGCAGTAAAACC | + |
Preference number: 3 (lower is better) Translates to: SQPQLNVVLYKT*LDHVSVHSSKT Trigger: GGTTTTACTGCTGTGAACAGATACATGATCAAGGCAAGTCTTATAAAGGACAACATTTAACTGGGGCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
||
3UTR CCA 72 bp | TCTAAATCAGATGATCTGTGGAAGCTTTCTGTTGTGTaGAAGCTTTCTGTTGCTGAGATAAACACCCAAGGT | + |
Preference number: 3 (lower is better) Translates to: SKSDDLWKLSVV*KLSVAEINTQG Trigger: ACCTTGGGTGTTTATCTCAGCAACAGAAAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR-3UTR CAA 90 bp | CTAAGCATTTCCAGTCAGGGACACTCAACTTACGAGTTTGGGAAATTTAGACATAAGGAGAGGTTTAATTaGGCTCATGGTTTATGTGGT | + |
Preference number: 3 (lower is better) Translates to: LSISSQGHSTYEFGKFRHKERFN*AHGLCG Trigger: ACCACATAAACCATGAGCCAAATTAAACCTCTCCTT...ATGTCTAAATTTCCCAAACTCGTAAGTTGAGTGTCCCTGACTGGAAATGCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | AGGTCCTCTGCAAGAGCACGTGTTCTTCTTAATCACTaGGTCAACTCTCCAGCTGTAGATTTTAATTTTATT | + |
Preference number: 3 (lower is better) Translates to: RSSARARVLLNH*VNSPAVDFNFI Trigger: AATAAAATTAAAATCTACAGCTGGAGAGTTGACTCAGTGATTAAGAAGAACACGTGCTCTTGCAGAGGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | TTATTATTATTTGTGCATAGCTCACCTTCAACTGAGTaGCTTTCAGATCTTTTATGTTCCTGGGGATGCATC | + |
Preference number: 3 (lower is better) Translates to: LLLFVHSSPSTE*LSDLLCSWGCI Trigger: GATGCATCCCCAGGAACATAAAAGATCTGAAAGTCACTCAGTTGAAGGTGAGCTATGCACAAATAATAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR TCA 72 bp | TCCCACTATGTTTCCCACCATGATGATCATGAACCATaGGCCTCCAACTATAAGTTATATATAACTATATTA | + |
Preference number: 3 (lower is better) Translates to: SHYVSHHDDHEP*ASNYKLYITIL Trigger: TAATATAGTTATATATAACTTATAGTTGGAGGCTCATGGTTCATGATCATCATGGTGGGAAACATAGTGGGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR GCA 90 bp | CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGCAGCAAGGAGGAGCCTaGCTCCGGGCCCAGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: QTSGDTLVCVQEAETAGMQQGGA*LRAQRP Trigger: TGGGCGCTGGGCCCGGAGGCAGGCTCCTCCTTGCTG...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | TACAATAGTGATGCTCGGTCCCTGAGGCTAGGTGCCTaGGCAGATCCAACCTGGTCCTGCACACCTACAGGA | + |
Preference number: 4 (lower is better) Translates to: YNSDARSLRLGA*ADPTWSCTPTG Trigger: TCCTGTAGGTGTGCAGGACCAGGTTGGATCTGCCAAGGCACCTAGCCTCAGGGACCGAGCATCACTATTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | CTGTTTTGGAGGCATGGTCCTGTTATTGTAGCCCAGTaGGCTCTGGACTGGAGCTTCCTCTGCCTCGGCCTT | + |
Preference number: 4 (lower is better) Translates to: LFWRHGPVIVAQ*ALDWSFLCLGL Trigger: AAGGCCGAGGCAGAGGAAGCTCCAGTCCAGAGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR GCA 90 bp | GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACAGTTCTACCCATGACTaGCACAGCAGCAGGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: GCSHPVSLGFLPDKRLLHSSTHD*HSSRPG Trigger: CCCAGGCCTGCTGCTGTGGCAGTCATGGGTAGAACT...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | GAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTGGTaGCCTAGCATGCTGGAGACACTGACCTTCATACGT | + |
Preference number: 4 (lower is better) Translates to: EAGGLWVASLEW*PSMLETLTFIR Trigger: ACGTATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | CTCAATCTCAGCACCTGGAAGGTAGAGGCAGGAGGATaGTGGGTAGCAAGTCTGGAGTGGTTGCCTAGCATG | + |
Preference number: 4 (lower is better) Translates to: LNLSTWKVEAGG*WVASLEWLPSM Trigger: CATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCAGGTGCTGAGATTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | TGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTaGGCCCTGTTGCTGTGGACAGACCTGTGGTGGCAC | + |
Preference number: 4 (lower is better) Translates to: WLMVYVVSDYSG*ALLLWTDLWWH Trigger: GTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | GCTGCTTACTGGCTTGCTCCCTGTGGCTTGCTCAGCTaGCTTTCTTATACAATCCTAACCCCTAGCCCCAGG | + |
Preference number: 4 (lower is better) Translates to: AAYWLAPCGLLS*LSYTILTPSPR Trigger: CCTGGGGCTAGGGGTTAGGATTGTATAAGAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | GTTGCACAGGCTGACCCCAAACTTCTGGAGATACTCTaGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGC | + |
Preference number: 4 (lower is better) Translates to: VAQADPKLLEIL*SASRKLKLQAC Trigger: GCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTGGGGTCAGCCTGTGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR CCA 90 bp | AGTGTGTCAACTTCCTCACAGGCCCCACCTAAGACCGCCTCTCCTGCTTCAGCACCAAAGACACAACGGTaGGATCAGAATACAGCCATC | + |
Preference number: 4 (lower is better) Translates to: SVSTSSQAPPKTASPASAPKTQR*DQNTAI Trigger: GATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGG...TGCTGAAGCAGGAGAGGCGGTCTTAGGTGGGGCCTGTGAGGAAGTTGACACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | AAGAGAACCATGGCAGTCACTTCCTGGAACCAGGGTTaGAAACCCAGCATGATCCTGCCCCATCTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: KRTMAVTSWNQG*KPSMILPHLGT Trigger: TGTACCCAGATGGGGCAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCATGGTTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | GTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTaGCTGTGGACAGACCTGTGGTGGCACAGGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: VYVVSDYSGLAL*LWTDLWWHRKS Trigger: TGACTTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR TCA 90 bp | TTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTTGCCAGCTGCTGGTGTTaGGGCTGGGGCTTCCGACGA | + |
Preference number: 4 (lower is better) Translates to: FNLAHGLCGFGLQWLGPVASCWC*GWGFRR Trigger: TCGTCGGAAGCCCCAGCCTCAACACCAGCAGCTGGC...AACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR TCA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTCTTCAGTTCTACCCATaGCTGCCACAGCAGCAGGCC | + |
Preference number: 4 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSLQFYP*LPQQQA Trigger: GGCCTGCTGCTGTGGCAGTCATGGGTAGAACTGAAG...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR TCA 90 bp | CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGATACGGCCAGCAGCGCTaGGCACAACAGCAAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: HPDSSQMKYEDICSMLSGYGQQR*AQQQGG Trigger: TCCTCCTTGCTGTTGTGCTCAGCGCTGCTGGCCGTA...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | TTGCTTTCTTATACAATCCTAACCCCTAGCCCCAGGTaGGTACCACCCACAATGTTCTGGGCCCTCCTGCAT | + |
Preference number: 4 (lower is better) Translates to: LLSYTILTPSPR*VPPTMFWALLH Trigger: ATGCAGGAGGGCCCAGAACATTGTGGGTGGTACCAACCTGGGGCTAGGGGTTAGGATTGTATAAGAAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | TTCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTaGTGTCTGGTGGCACAGTTCACTTGCCCCACAACC | + |
Preference number: 4 (lower is better) Translates to: FMGFEVTQPYHF*CLVAQFTCPTT Trigger: GGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | TTTGTAGGCATAACACAGAACCAACTCCTTTTGCTTTaGGTTTCCGTCACTAACCCCGAGACCACAGAGAAG | + |
Preference number: 4 (lower is better) Translates to: FVGITQNQLLLL*VSVTNPETTEK Trigger: CTTCTCTGTGGTCTCGGGGTTAGTGACGGAAACCAAAAGCAAAAGGAGTTGGTTCTGTGTTATGCCTACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | AATAATAGCAAGTGGGGGTGGAAAAGCCAAGCCTTCTaGCTTCCTCCTTCTTCCTGTCTTGTGTATCCTAGA | + |
Preference number: 4 (lower is better) Translates to: NNSKWGWKSQAF*LPPSSCLVYPR Trigger: TCTAGGATACACAAGACAGGAAGAAGGAGGAAGCAAGAAGGCTTGGCTTTTCCACCCCCACTTGCTATTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | CAGATATGGGTCACCAGTACCCAGATTGTTTTCTTCTaGCTCTTCCAGTTTCCCCTCTCAGCATTACACTTC | + |
Preference number: 4 (lower is better) Translates to: QIWVTSTQIVFF*LFQFPLSALHF Trigger: GAAGTGTAATGCTGAGAGGGGAAACTGGAAGAGCAAGAAGAAAACAATCTGGGTACTGGTGACCCATATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | CAGCACAATGGCCACACTGCAGCCTCTCTTCCAGAGTaGGAAAGAGGCCATTTAATACTTTCAAGTAACAGT | + |
Preference number: 4 (lower is better) Translates to: QHNGHTAASLPE*ERGHLILSSNS Trigger: ACTGTTACTTGAAAGTATTAAATGGCCTCTTTCCAACTCTGGAAGAGAGGCTGCAGTGTGGCCATTGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR CCA 90 bp | TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGCTAAATTAGCCTCTTaGGAATCTCTCTTCTTCAGT | + |
Preference number: 4 (lower is better) Translates to: FHLCLVGLLLQGIQSWGSAKLAS*ESLFFS Trigger: ACTGAAGAAGAGAGATTCCCAAGAGGCTAATTTAGC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR GCA 90 bp | CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGACAAGCCTTGGGAATCTaGAACATTTCCTACTATAGA | + |
Preference number: 4 (lower is better) Translates to: HPDSSQMKYEDICSMLSGQALGI*NISYYR Trigger: TCTATAGTAGGAAATGTTGCAGATTCCCAAGGCTTG...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR GCA 90 bp | CTAAGCATTTCCAGTCAGGGACACTCAACTTACGAGTTTGGGAAATTTAGACATATCTTGTGTCAGCCTTaGCATACTCTTTCCATAAAG | + |
Preference number: 4 (lower is better) Translates to: LSISSQGHSTYEFGKFRHILCQP*HTLSIK Trigger: CTTTATGGAAAGAGTATGGCAAGGCTGACACAAGAT...ATGTCTAAATTTCCCAAACTCGTAAGTTGAGTGTCCCTGACTGGAAATGCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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3UTR CAA 72 bp | ACATATGCAAGTATACATCTGTGTGCAAACCAAACATaGATGCTTAGTGCCTTCAATTGCTCTAGCATAATT | + |
Preference number: 4 (lower is better) Translates to: TYASIHLCANQT*MLSAFNCSSII Trigger: AATTATGCTAGAGCAATTGAAGGCACTAAGCATCAATGTTTGGTTTGCACACAGATGTATACTTGCATATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR CAA 90 bp | CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATCAGAATACAGCCATCTaGTGTCAGCCTTGCCATACT | + |
Preference number: 5 (lower is better) Translates to: LNMQTAFTAQVLIITTEDQNTAI*CQPCHT Trigger: AGTATGGCAAGGCTGACACAAGATGGCTGTATTCTG...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS-3UTR CAA 90 bp | TTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTTCATCTTGTGTCAGCCTaGCCATACTCTTTCCATAAA | + |
Preference number: 5 (lower is better) Translates to: FNLAHGLCGFGLQWLGPVHLVSA*PYSFHK Trigger: TTTATGGAAAGAGTATGGCAAGGCTGACACAAGATG...AACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS TCA 72 bp | GCGCAGGCCCAGCGCGCACCCTACGGCCAGCAGCGCTaGGCACAACAGCAAGGAGGAGCCTGCCTCCGGGCC | + |
Preference number: 6 (lower is better) Translates to: AQAQRAPYGQQR*AQQQGGACLRA Trigger: GGCCCGGAGGCAGGCTCCTCCTTGCTGTTGTGCTCAGCGCTGCTGGCCGTAGGGTGCGCGCTGGGCCTGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS TCA 72 bp | CCAAATAGACCCAGAGGTAGAGCCAGCTGCTGGTGTTaGGGCTGGGGCTTCCGACGAGCCACTCGGGGAAGA | + |
Preference number: 6 (lower is better) Translates to: PNRPRGRASCWC*GWGFRRATRGR Trigger: TCTTCCCCGAGTGGCTCGTCGGAAGCCCCAGCCTCAACACCAGCAGCTGGCTCTACCTCTGGGTCTATTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS CCA 72 bp | CTAGGACAACAGTCAGGATTTCCAAAGACACAACGGTaGGATCAGAATACAGCCATCTTGTGTCAGCCTTGC | + |
Preference number: 6 (lower is better) Translates to: LGQQSGFPKTQR*DQNTAILCQPC Trigger: GCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGGAAATCCTGACTGTTGTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS GCA 72 bp | CGGTGGGATCAGAATACAGCCATCTTGTGTCAGCCTTaGCATACTCTTTCCATAAAGATGCAATCAAGCCTT | + |
Preference number: 6 (lower is better) Translates to: RWDQNTAILCQP*HTLSIKMQSSL Trigger: AAGGCTTGATTGCATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS CAA 72 bp | ACGGTGGGATCAGAATACAGCCATCTTGTGTCAGCCTaGCCATACTCTTTCCATAAAGATGCAATCAAGCCT | + |
Preference number: 6 (lower is better) Translates to: TVGSEYSHLVSA*PYSFHKDAIKP Trigger: AGGCTTGATTGCATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS CAA 72 bp | CCAAAGACACAACGGTGGGATCAGAATACAGCCATCTaGTGTCAGCCTTGCCATACTCTTTCCATAAAGATG | + |
Preference number: 6 (lower is better) Translates to: PKTQRWDQNTAI*CQPCHTLSIKM Trigger: CATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |
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CDS CAA 90 bp | TCAGGATTTCCAAAGACACAACGGTGGGATCAGAATACAGCCATCTaGTGTCAGCCTTGCCATACTCTTTCCATAAAGATGCAATCAAGC | + |
Preference number: 6 (lower is better) Translates to: SGFPKTQRWDQNTAI*CQPCHTLSIKMQSS Trigger: GCTTGATTGCATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGGAAATCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022494.10 |