RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EBPL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021928

Ensembl transcript IDs: ENSMUST00000022494.10

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCACGGTGCAAGCTCTCAGCTACTGCCCCAGCACCATCCCTGCCTaGCTGCCTGCCTGCCTGCCTCCCACTATGTTTCCCACCATGATG +
Preference number: 1 (lower is better)
Translates to: TTVQALSYCPSTIPA*LPACLPPTMFPTMM
Trigger: CATCATGGTGGGAAACATAGTGGGAGGCAGGCAGGCAGGCAGGCAGGCAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp TGTCTTCCAAACCACAGGGTGGACTCGGCCAAGGGAGGCATGGCCTaGCCAACGACCACCACTGGAGCCACTCCCACCTCAGTCTGTCTT +
Preference number: 1 (lower is better)
Translates to: CLPNHRVDSAKGGMA*PTTTTGATPTSVCL
Trigger: AAGACAGACTGAGGTGGGAGTGGCTCCAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTTTGGAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp CTCCAGTGCCCAGTACCACGAAGCGGGCGTGGGTCCAGGTGTGGGTaGTCTCCTGAGCAGAGGGATGGGTTAAGTCGTATTGTGAGTACC +
Preference number: 1 (lower is better)
Translates to: LQCPVPRSGRGSRCG*SPEQRDGLSRIVST
Trigger: GGTACTCACAATACGACTTAACCCATCCCTCTGCTCAGGAGAGCACCCACACCTGGACCCACGCCCGCTTCGTGGTACTGGGCACTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp CCCTTCCTTAGCAATCACCCATCAGGGAGAAGAGGCCAGGTACTCTaGGGACTGCAGCCTGTCCTGTGTCCTGCAGGCCAGCCTGGGTTA +
Preference number: 1 (lower is better)
Translates to: PFLSNHPSGRRGQVL*GLQPVLCPAGQPGL
Trigger: TAACCCAGGCTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGTGATTGCTAAGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GTGCCTTGGCAGATCCAACCTGGTCCTGCACACCTACAGGATTCCTaGAGAGCCGCTGGTGCTCAGTCGATGACAGAAGCCGGGAACTGC +
Preference number: 1 (lower is better)
Translates to: VPWQIQPGPAHLQDS*RAAGAQSMTEAGNC
Trigger: GCAGTTCCCGGCTTCTGTCATCGACTGAGCACCAGCGGCTCTCCAGGAATCCTGTAGGTGTGCAGGACCAGGTTGGATCTGCCAAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp GTGGTGGCACAGGAAGTCATGGTAGGCACAGTGACAGAGCAGAGCTaGTCACTCGGCCAGGCATGGCCTCTTGTGATCCCAGCACTTCAG +
Preference number: 1 (lower is better)
Translates to: VVAQEVMVGTVTEQS*SLGQAWPLVIPALQ
Trigger: CTGAAGTGCTGGGATCACAAGAGGCCATGCCTGGCCGAGTGAGCAGCTCTGCTCTGTCACTGTGCCTACCATGACTTCCTGTGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp TTAGCAATCACCCATCAGGGAGAAGAGGCCAGGTACTCTGGGGACTaGAGCCTGTCCTGTGTCCTGCAGGCCAGCCTGGGTTATACCATC +
Preference number: 1 (lower is better)
Translates to: LAITHQGEEARYSGD*SLSCVLQASLGYTI
Trigger: GATGGTATAACCCAGGCTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGTGATTGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp AGAGATGAAGGGGAAGAGAGACCTAAACTGGACCAGCAGCCAGACTaGCAAAGAGTGAGCGGCCTGGCTCCAGTGCCCAGTACCACGAAG +
Preference number: 1 (lower is better)
Translates to: RDEGEERPKLDQQPD*QRVSGLAPVPSTTK
Trigger: CTTCGTGGTACTGGGCACTGGAGCCAGGCCGCTCACTCTTTGCCAGTCTGGCTGCTGGTCCAGTTTAGGTCTCTCTTCCCCTTCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GTGAGGTGTCTCTCAGTTATAAGGGATGTCTTCCAAACCACAGGGTaGACTCGGCCAAGGGAGGCATGGCCTGACCAACGACCACCACTG +
Preference number: 1 (lower is better)
Translates to: VRCLSVIRDVFQTTG*TRPREAWPDQRPPL
Trigger: CAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTTTGGAAGACATCCCTTATAACTGAGAGACACCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp CAAGCCAGGAATCTGGAGGAAGTTGATGCAGAAGCCATGGAGGGGTaGTGCTTACTGGCTTGCTCCCTGTGGCTTGCTCAGCTTGCTTTC +
Preference number: 1 (lower is better)
Translates to: QARNLEEVDAEAMEG*CLLACSLWLAQLAF
Trigger: GAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp ATTCTCAGTGTGTTCTTTCTTCTCTCTGCCTCACATAGACCACGGTaGAAGCTCTCAGCTACTGCCCCAGCACCATCCCTGCCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: ILSVFFLLSASHRPR*KLSATAPAPSLPAC
Trigger: GCAGGCAGGCAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACCGTGGTCTATGTGAGGCAGAGAGAAGAAAGAACACACTGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp AGGACCTTCATGAACCAAGCAGGAAGAGGAAGGCAGAGCCCTGTATaGGGACTGAACCTGGTTTGGTTCCGAGTGAGTGCCCAGAGTGTG +
Preference number: 1 (lower is better)
Translates to: RTFMNQAGRGRQSPV*GLNLVWFRVSAQSV
Trigger: CACACTCTGGGCACTCACTCGGAACCAAACCAGGTTCAGTCCCCATACAGGGCTCTGCCTTCCTCTTCCTGCTTGGTTCATGAAGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp GAAGTCAGGACAGCAACCCAAACAAGCCAGGAATCTGGAGGAAGTTaGTGCAGAAGCCATGGAGGGGTGCTGCTTACTGGCTTGCTCCCT +
Preference number: 1 (lower is better)
Translates to: EVRTATQTSQESGGS*CRSHGGVLLTGLLP
Trigger: AGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTTTGGGTTGCTGTCCTGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp GGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTTaGTGTGGACAGACCTGTGGTGGCACAGGAAGTCATGGTAGGCAC +
Preference number: 1 (lower is better)
Translates to: GSWFMWFRITVAWPC*CGQTCGGTGSHGRH
Trigger: GTGCCTACCATGACTTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp TGCATGTCCCCTGTCAGCTCTCTGCTGTACTCTGTGCCAGGGATCTaGAGGTCAAGACACCAAGTCACTTCTGTGAGAACTAGAGTGTCC +
Preference number: 1 (lower is better)
Translates to: CMSPVSSLLYSVPGI*RSRHQVTSVRTRVS
Trigger: GGACACTCTAGTTCTCACAGAAGTGACTTGGTGTCTTGACCTCCAGATCCCTGGCACAGAGTACAGCAGAGAGCTGACAGGGGACATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp GGGAAGCTCATGAAACATAAAGTAAGGCCACATTTGAGGAGTCAGTaGAATGGCCCGGAGGGTAAAGGTTCCTGCCACCAAGCCTCGGCA +
Preference number: 1 (lower is better)
Translates to: GKLMKHKVRPHLRSQ*NGPEGKGSCHQASA
Trigger: TGCCGAGGCTTGGTGGCAGGAACCTTTACCCTCCGGGCCATTTCACTGACTCCTCAAATGTGGCCTTACTTTATGTTTCATGAGCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp TGCGGAAGGCCAAGCCAGGCCAGTGACCTTCCTTGTGCCAGGAAGTaGTGCCCATATTTAGAGATGGGTCTTCCCATACCAATAAGGCAA +
Preference number: 1 (lower is better)
Translates to: CGRPSQASDLPCARK*CPYLEMGLPIPIRQ
Trigger: TTGCCTTATTGGTATGGGAAGACCCATCTCTAAATATGGGCATCACTTCCTGGCACAAGGAAGGTCACTGGCCTGGCTTGGCCTTCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp TCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTTGTGTCTGGTaGCACAGTTCACTTGCCCCACAACCAACCAGCTTCTGCTATGGG +
Preference number: 1 (lower is better)
Translates to: SWGLRSLNLTTSCVW*HSSLAPQPTSFCYG
Trigger: CCCATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp CTTCAGGGAGAGAAGGGATTGAACCAGGACCTAACTGCAGCACAATaGCCACACTGCAGCCTCTCTTCCAGAGTTGGAAAGAGGCCATTT +
Preference number: 1 (lower is better)
Translates to: LQGEKGLNQDLTAAQ*PHCSLSSRVGKRPF
Trigger: AAATGGCCTCTTTCCAACTCTGGAAGAGAGGCTGCAGTGTGGCCATTGTGCTGCAGTTAGGTCCTGGTTCAATCCCTTCTCTCCCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp ACCTGGAAGGTAGAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTaGTTGCCTAGCATGCTGGAGACACTGACCTTCATACGTTTAACA +
Preference number: 1 (lower is better)
Translates to: TWKVEAGGLWVASLE*LPSMLETLTFIRLT
Trigger: TGTTAAACGTATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GCTTCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTTGTGTCTaGTGGCACAGTTCACTTGCCCCACAACCAACCAGCTTCTGCTAT +
Preference number: 1 (lower is better)
Translates to: ASWGLRSLNLTTSCV*WHSSLAPQPTSFCY
Trigger: ATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp TCAAGACACCAAGTCACTTCTGTGAGAACTAGAGTGTCCCACACTTaGCAGTGGGACGTGTCTGTTCTTGGATACCAATGGGAGCCTGAG +
Preference number: 1 (lower is better)
Translates to: SRHQVTSVRTRVSHT*QWDVSVLGYQWEPE
Trigger: CTCAGGCTCCCATTGGTATCCAAGAACAGACACGTCCCACTGTCAAGTGTGGGACACTCTAGTTCTCACAGAAGTGACTTGGTGTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp CAGACACTACAAACTGAGCCACCTCCCCAGCCCAACTTATATTCTTaGGATGATGGGACTGTGGTAGAGGAGCATTTTGCAGGGATTGCC +
Preference number: 1 (lower is better)
Translates to: QTLQTEPPPQPNLYS*DDGTVVEEHFAGIA
Trigger: GGCAATCCCTGCAAAATGCTCCTCTACCACAGTCCCATCATCTCAAGAATATAAGTTGGGCTGGGGAGGTGGCTCAGTTTGTAGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp CCAATCACACAAACATCTGAGGAAACTGGCTTCGAAAGTCAAGGATaGTTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: PITQTSEETGFESQG*LLATVGLHPASLLG
Trigger: CCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGACTTTCGAAGCCAGTTTCCTCAGATGTTTGTGTGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp CAGCCTTCAGATGAAGATGTAGAACTCTCAGCTCTACCTGCACCATaGCTGCCTAGATGTTGCCCCACTCACACCTTGATGATAATGGAC +
Preference number: 1 (lower is better)
Translates to: QPSDEDVELSALPAP*LPRCCPTHTLMIMD
Trigger: GTCCATTATCATCAAGGTGTGAGTGGGGCAACATCTAGGCAGGCATGGTGCAGGTAGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GAGAGGTTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTaGCTTGGCCCTGTTGCTGTGGACAGACCTGTGGTGGCACAGGAA +
Preference number: 1 (lower is better)
Translates to: ERFNLAHGLCGFGLQ*LGPVAVDRPVVAQE
Trigger: TTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GTGAAACACCATGGCCAAAGGCAAGCGGGAAGGAAGGGGTTTCTTTaGCTTACCTTTCCACATCATAGTCCATCACCAAAGGAAGTCAGG +
Preference number: 1 (lower is better)
Translates to: VKHHGQRQAGRKGFL*LTFPHHSPSPKEVR
Trigger: CCTGACTTCCTTTGGTGATGGACTATGATGTGGAAAGGTAAGCCAAAGAAACCCCTTCCTTCCCGCTTGCCTTTGGCCATGGTGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp TGCCTGCCTAGATGTTGCCCCACTCACACCTTGATGATAATGGACTaGACCTCTGAACCTGTAAGCCAGCCCCAGTTAAATGTTGTCCTT +
Preference number: 1 (lower is better)
Translates to: CLPRCCPTHTLMIMD*TSEPVSQPQLNVVL
Trigger: AAGGACAACATTTAACTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTGTGAGTGGGGCAACATCTAGGCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 90 bp GAGAAGGGATTGAACCAGGACCTAACTGCAGCACAATGGCCACACTaGAGCCTCTCTTCCAGAGTTGGAAAGAGGCCATTTAATACTTTC +
Preference number: 1 (lower is better)
Translates to: EKGLNQDLTAAQWPH*SLSSRVGKRPFNTF
Trigger: GAAAGTATTAAATGGCCTCTTTCCAACTCTGGAAGAGAGGCTGCAGTGTGGCCATTGTGCTGCAGTTAGGTCCTGGTTCAATCCCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp CTGACCCCAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTaGAACTGCAGGCATGCACCACTATACCACAGCTATAATTGTAAG +
Preference number: 1 (lower is better)
Translates to: LTPNFWRYSCLRPGS*NCRHAPLYHSYNCK
Trigger: CTTACAATTATAGCTGTGGTATAGTGGTGCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTGGGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp ACGATCCTGCTGCCTCAGCCTCTTGAGTGGCTAAAACCACAGATATaGGTCACCAGTACCCAGATTGTTTTCTTCTTGCTCTTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: TILLPQPLEWLKPQI*VTSTQIVFFLLFQF
Trigger: AAACTGGAAGAGCAAGAAGAAAACAATCTGGGTACTGGTGACCCATATCTGTGGTTTTAGCCACTCAAGAGGCTGAGGCAGCAGGATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp TGCTGTTGGAGTAGAAAGACCACGTTTTTGTTGATGTTCCTGTTTTaGAGGCATGGTCCTGTTATTGTAGCCCAGTTGGCTCTGGACTGG +
Preference number: 1 (lower is better)
Translates to: CCWSRKTTFLLMFLF*RHGPVIVAQLALDW
Trigger: CCAGTCCAGAGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAGGAACATCAACAAAAACGTGGTCTTTCTACTCCAACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp AGATACAAGGTCACGGTGCCACCCAGACTCTTCTCAGATGAAGTATaGAGACATCTGCTCAATGCTTTCTGGATGGGAGGAGTTTACAAG +
Preference number: 1 (lower is better)
Translates to: RYKVTVPPRLFSDEV*RHLLNAFWMGGVYK
Trigger: CTTGTAAACTCCTCCCATCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTGGCACCGTGACCTTGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp CAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTaGTTAGTGGAGCCAAGACAGATACAAGGTCACGGTGCCACCCAG +
Preference number: 1 (lower is better)
Translates to: QTAFTAQVLIITTED*LVEPRQIQGHGATQ
Trigger: CTGGGTGGCACCGTGACCTTGTATCTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp CCCACAACCAACCAGCTTCTGCTATGGGCACAGATTCCTCAAAAGTaGAGGCCTTTTCAAACTACCCACCATTATATTGTGTGGGATGTG +
Preference number: 1 (lower is better)
Translates to: PTTNQLLLWAQIPQK*RPFQTTHHYIVWDV
Trigger: CACATCCCACACAATATAATGGTGGGTAGTTTGAAAAGGCCTTCACTTTTGAGGAATCTGTGCCCATAGCAGAAGCTGGTTGGTTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GGGCGGGTGTTGCTTTCACAGTCCCAGTCTAAATCAGATGATCTGTaGAAGCTTTCTGTTGTGTGGAAGCTTTCTGTTGCTGAGATAAAC +
Preference number: 1 (lower is better)
Translates to: GRVLLSQSQSKSDDL*KLSVVWKLSVAEIN
Trigger: GTTTATCTCAGCAACAGAAAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGACTGGGACTGTGAAAGCAACACCCGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GTACACTGTAGCTGTACAGATGGTTGTAAGCCACCATGTGATTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTA +
Preference number: 1 (lower is better)
Translates to: VHCSCTDGCKPPCDC*DLNSGPLEEQSVLL
Trigger: TAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCTACAGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp ATATCTTTTGCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTGGCTaGACACTAGGGGCCTATCTAGAGACTTCATTAGCATGGAGAACA +
Preference number: 1 (lower is better)
Translates to: ISFAGRNVQEGKLIG*TLGAYLETSLAWRT
Trigger: TGTTCTCCATGCTAATGAAGTCTCTAGATAGGCCCCTAGTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGCAAAAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp TTAAATATCTTTTGCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTaGCTGAACACTAGGGGCCTATCTAGAGACTTCATTAGCATGGAG +
Preference number: 1 (lower is better)
Translates to: LNIFCRKECPGREAH*LNTRGLSRDFISME
Trigger: CTCCATGCTAATGAAGTCTCTAGATAGGCCCCTAGTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGCAAAAGATATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp CAGTCCCAGTCTAAATCAGATGATCTGTGGAAGCTTTCTGTTGTGTaGAAGCTTTCTGTTGCTGAGATAAACACCCAAGGTAGCAACTTA +
Preference number: 1 (lower is better)
Translates to: QSQSKSDDLWKLSVV*KLSVAEINTQGSNL
Trigger: TAAGTTGCTACCTTGGGTGTTTATCTCAGCAACAGAAAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGACTGGGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp GAAAGCTATGTTATTACAGGTAACTGCTATCACACCAGTCAGTGGTaGCACATACCATTAATCCCAGCATACCAAAGGCAAAAACAGGCA +
Preference number: 1 (lower is better)
Translates to: ESYVITGNCYHTSQW*HIPLIPAYQRQKQA
Trigger: TGCCTGTTTTTGCCTTTGGTATGCTGGGATTAATGGTATGTGCCACCACTGACTGGTGTGATAGCAGTTACCTGTAATAACATAGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 90 bp CTAGAAAGCTATGTTATTACAGGTAACTGCTATCACACCAGTCAGTaGTGGCACATACCATTAATCCCAGCATACCAAAGGCAAAAACAG +
Preference number: 1 (lower is better)
Translates to: LESYVITGNCYHTSQ*WHIPLIPAYQRQKQ
Trigger: CTGTTTTTGCCTTTGGTATGCTGGGATTAATGGTATGTGCCACCACTGACTGGTGTGATAGCAGTTACCTGTAATAACATAGCTTTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp ACTACTCCAGATTACCACTATCGTTCTCTGTTGGGCACACAAATTTaGAGCAATTTGAAGTTTGTAGGCATAACACAGAACCAACTCCTT +
Preference number: 1 (lower is better)
Translates to: TTPDYHYRSLLGTQI*SNLKFVGITQNQLL
Trigger: AAGGAGTTGGTTCTGTGTTATGCCTACAAACTTCAAATTGCTTCAAATTTGTGTGCCCAACAGAGAACGATAGTGGTAATCTGGAGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 90 bp TATAAGTTACCTTGGTCATGGTGTTCTGTTATGCCGGGAGAAAAGTaGCTAAGAAACACAGATCATCATCATCATCATCATCATTATTAT +
Preference number: 1 (lower is better)
Translates to: YKLPWSWCSVMPGEK*LRNTDHHHHHHHYY
Trigger: ATAATAATGATGATGATGATGATGATGATCTGTGTTTCTTAGTCACTTTTCTCCCGGCATAACAGAACACCATGACCAAGGTAACTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGGGGTCCAGGTGTGGGTaGTCTCCTGAGCAGAGGGAT +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAGSRCG*SPEQRD
Trigger: ATCCCTCTGCTCAGGAGAGCACCCACACCTGGACCC...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGCAGAGAGGCGGGGCTTaGCATCCCTTCAAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAQRGGA*HPFKSK
Trigger: TTTGCTCTTGAAGGGATGTCAAGCCCCGCCTCTCTG...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGAAATGCCCTACATGCTaGGTGGTGGTGGTGCACGTC +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAKCPTC*VVVVHV
Trigger: GACGTGCACCACCACCACCCAGCATGTAGGGCATTT...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTCCACACCTCAGTTCTaGGCTTCATGGGGTTTGAGG +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRASTPQF*ASWGLR
Trigger: CCTCAAACCCCATGAAGCTCAGAACTGAGGTGTGGA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGGGTTTCGGATTACAGTaGCTTGGCCCTGTTGCTGTG +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAGFGLQ*LGPVAV
Trigger: CACAGCAACAGGGCCAAGCCACTGTAATCCGAAACC...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGCTAGGTGAAACACCATaGCCAAAGGCAAGCGGGAAG +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRALGETP*PKASGK
Trigger: CTTCCCGCTTGCCTTTGGCCATGGTGTTTCACCTAG...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGCCTTCAGGACCTTCATaGACCAAGCAGGAAGAGGAA +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAPSGPS*TKQEEE
Trigger: TTCCTCTTCCTGCTTGGTTCATGAAGGTCCTGAAGG...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGATGGCAGTCACTTCCTaGAACCAGGGTTTGAAACCC +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAMAVTS*NQGLKP
Trigger: GGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCAT...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGGCACTGGGTTTCCCTaGGACTGGGGTTGCAGACTG +
Preference number: 2 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSGTGFP*DWGCRL
Trigger: CAGTCTGCAACCCCAGTCTCAGGGAAACCCAGTGCC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp CCCACCTGTAAGAGAACCATGGCAGTCACTTCCTGGAACCAGGGTTaGAAACCCAGCATGATCCTGCCCCATCTGGGTACAGATTCTGTA +
Preference number: 2 (lower is better)
Translates to: PTCKRTMAVTSWNQG*KPSMILPHLGTDSV
Trigger: TACAGAATCTGTACCCAGATGGGGCAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCATGGTTCTCTTACAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp GGTCACTCAACCTTACCACTTCTTGTGTCTGGTGGCACAGTTCACTaGCCCCACAACCAACCAGCTTCTGCTATGGGCACAGATTCCTCA +
Preference number: 2 (lower is better)
Translates to: GHSTLPLLVSGGTVH*PHNQPASAMGTDSS
Trigger: TGAGGAATCTGTGCCCATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp TTGATGTTCCTGTTTTGGAGGCATGGTCCTGTTATTGTAGCCCAGTaGGCTCTGGACTGGAGCTTCCTCTGCCTCGGCCTTAGTTACCAC +
Preference number: 2 (lower is better)
Translates to: LMFLFWRHGPVIVAQ*ALDWSFLCLGLSYH
Trigger: GTGGTAACTAAGGCCGAGGCAGAGGAAGCTCCAGTCCAGAGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAGGAACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp CTTGTCACTAAACCCAGTGCTCACCAATCCCACCAGTCTGGCTACCCAGCAAACCTAGCCTGCCAGCCATaGCTGAGCGTCTCATTAAAT +
Preference number: 2 (lower is better)
Translates to: LVTKPSAHQSHQSGYPANLACQP*LSVSLN
Trigger: ATTTAATGAGACGCTCAGTCATGGCTGGCAGGCTAG...GTTTGCTGGGTAGCCAGACTGGTGGGATTGGTGAGCACTGGGTTTAGTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTTACCCATCCCCTCCTaGCTTCATGTCACATGTATT +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRALPIPS*LHVTCI
Trigger: AATACATGTGACATGAAGGCAGGAGGGGATGGGTAA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp TTCCACACTGTTGCACAGGCTGACCCCAAACTTCTGGAGATACTCTaGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGCACCACTATA +
Preference number: 2 (lower is better)
Translates to: FHTVAQADPKLLEIL*SASRKLKLQACTTI
Trigger: TATAGTGGTGCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTGGGGTCAGCCTGTGCAACAGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp GTTCTGAGCTTCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTaGTGTCTGGTGGCACAGTTCACTTGCCCCACAACCAACCAGCTT +
Preference number: 2 (lower is better)
Translates to: VLSFMGFEVTQPYHF*CLVAQFTCPTTNQL
Trigger: AAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAAGCTCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACCAAGGCCCACACATGTaGCCACAGAACACTGATCAT +
Preference number: 2 (lower is better)
Translates to: GCSHPVSLGFLPDKRLLHQGPHM*PQNTDH
Trigger: ATGATCAGTGTTCTGTGGGCACATGTGTGGGCCTTG...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTGGTTTGTATATGCTTaGCTCAGGAAGTGGCACTAT +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAWFVYA*LRKWHY
Trigger: ATAGTGCCACTTCCTGAGCCAAGCATATACAAACCA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGTGTGACTGCTTCCTATaGGGAAAGATGATGATTCTG +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRACDCFL*GKMMIL
Trigger: CAGAATCATCATCTTTCCCCATAGGAAGCAGTCACA...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp GGTTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTaGGCCCTGTTGCTGTGGACAGACCTGTGGTGGCACAGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: GLIWLMVYVVSDYSG*ALLLWTDLWWHRKS
Trigger: TGACTTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCAGGCATGGCCTCTTGTaGTCCCAGCACTTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: KRKPSLGDLSTVLYAKGLRHGLL*SQHFRG
Trigger: CCCTCTGAAGTGCTGGGATCACAAGAGGCCATGCCT...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp CTGTTCTTGGATACCAATGGGAGCCTGAGCCCCCATTTCCCTTCCTTAGCAATCGTGATTGCTGGGATTTaGACTCAGGACCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: LFLDTNGSLSPHFPSLAIVIAGI*TQDLWK
Trigger: CTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCAC...GATTGCTAAGGAAGGGAAATGGGGGCTCAGGCTCCCATTGGTATCCAAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAGCCTGTCCTGTGTCCTaGAGGCCAGCCTGGGTTATA +
Preference number: 2 (lower is better)
Translates to: LKQGLTMLSNWSQTTGLQACPVS*RPAWVI
Trigger: TATAACCCAGGCTGGCCTGCAGGACACAGGACAGGC...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGGTAGAGGAGCATTTTaGAGGGATTGCCCCACACTG +
Preference number: 2 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSGRGAF*RDCPTL
Trigger: CAGTGTGGGGCAATCCCTGCAAAATGCTCCTCTACC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CTGTTCTTGGATACCAATGGGAGCCTGAGCCCCCATTTCCCTTCCTTAGCAATCCCACCATGTGATTGCTaGGATTTGAACTCAGGACCT +
Preference number: 2 (lower is better)
Translates to: LFLDTNGSLSPHFPSLAIPPCDC*DLNSGP
Trigger: AGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGG...GATTGCTAAGGAAGGGAAATGGGGGCTCAGGCTCCCATTGGTATCCAAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGAGTCAGAACAGGGCACTaGGTTTCCCTGAGACTGGGG +
Preference number: 2 (lower is better)
Translates to: HPDSSQMKYEDICSMLSGVRTGH*VSLRLG
Trigger: CCCCAGTCTCAGGGAAACCCAGTGCCCTGTTCTGAC...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGCTACATGCTGGGTGGTaGTGGTGCACGTCTTTAATC +
Preference number: 2 (lower is better)
Translates to: QTSGDTLVCVQEAETAGMLHAGW*WCTSLI
Trigger: GATTAAAGACGTGCACCACCACCACCCAGCATGTAG...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAAGGGGTGCTGCTTACTaGCTTGCTCCCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: LKQGLTMLSNWSQTTGLQRGAAY*LAPCGL
Trigger: CAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCT...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACCCATGGTCCTCTCAGTaGGGTGACATTTACATGTTC +
Preference number: 2 (lower is better)
Translates to: GCSHPVSLGFLPDKRLLHPWSSQ*GDIYMF
Trigger: GAACATGTAAATGTCACCCCACTGAGAGGACCATGG...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp TGGAAGGTAGAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTGGTaGCCTAGCATGCTGGAGACACTGACCTTCATACGTTTAACAAAA +
Preference number: 2 (lower is better)
Translates to: WKVEAGGLWVASLEW*PSMLETLTFIRLTK
Trigger: TTTTGTTAAACGTATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCTTACTGTCTCACACCTaGGGCCATCCTGAGCCACTG +
Preference number: 2 (lower is better)
Translates to: KRKPSLGDLSTVLYAKGLLLSHT*GHPEPL
Trigger: CAGTGGCTCAGGATGGCCTCAGGTGTGAGACAGTAA...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACTTAGCAGCCTTCAGATaGAGATGTAGAACTCTCAGC +
Preference number: 2 (lower is better)
Translates to: GCSHPVSLGFLPDKRLLHLAAFR*RCRTLS
Trigger: GCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAA...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACGTGATGGTTTGTATATaGTTGGCTCAGGAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: GCSHPVSLGFLPDKRLLHVMVCI*LAQEVA
Trigger: TGCCACTTCCTGAGCCAAGCATATACAAACCATCAC...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp ATTGCTAGCAACTGTTGGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGAGCGGGATTAAATATCTTTTaGAGGAAGGAATGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: IASNCWAASCLIAGVPRAGLNIF*RKECPG
Trigger: TCCTGGACATTCCTTCCTGCAAAAGATATTTAATCC...CGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACCCCAACTTATATTCTTaGGATGATGGGACTGTGGTA +
Preference number: 2 (lower is better)
Translates to: GCSHPVSLGFLPDKRLLHPNLYS*DDGTVV
Trigger: TACCACAGTCCCATCATCTCAAGAATATAAGTTGGG...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGATTACCACTGAGGATTaGTTAGTGGAGCCAAGACAG +
Preference number: 2 (lower is better)
Translates to: QTSGDTLVCVQEAETAGMITTED*LVEPRQ
Trigger: CTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAAT...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAACAAACAGCCAAGTTTaGCCCCTTCCAGCCCATCTG +
Preference number: 2 (lower is better)
Translates to: LKQGLTMLSNWSQTTGLQTNSQV*PLPAHL
Trigger: CAGATGGGCTGGAAGGGGGCAAACTTGGCTGTTTGT...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATGTGGCTTGGCCCTGTTaGTGTGGACAGACCTGTGGT +
Preference number: 2 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDVAWPC*CGQTCG
Trigger: ACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCAC...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATCCAATCCCACCAGTCTaGCTACCCAGCAAACCCTCC +
Preference number: 2 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDPIPPV*LPSKPS
Trigger: GGAGGGTTTGCTGGGTAGCCAGACTGGTGGGATTGG...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp TGTAGCTGTACAGATGGTTGTAAGCCACCATGTGATTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACT +
Preference number: 2 (lower is better)
Translates to: CSCTDGCKPPCDCWD*NSGPLEEQSVLLTT
Trigger: AGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAACTGAGAGTGACTTTCTaGTCTTCCTGCCTCAACCTC +
Preference number: 2 (lower is better)
Translates to: LKQGLTMLSNWSQTTGLQLRVTF*SSCLNL
Trigger: GAGGTTGAGGCAGGAAGATCAGAAAGTCACTCTCAG...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp CTAAGCATTTCCAGTCAGGGACACTCAACTTACGAGTTTGGGAAATTTAGACATGGGATTAAAGGTGGGTaGCACCAACGCCAGGCCATA +
Preference number: 2 (lower is better)
Translates to: LSISSQGHSTYEFGKFRHGIKGG*HQRQAI
Trigger: TATGGCCTGGCGTTGGTGGCACCCACCTTTAATCCC...ATGTCTAAATTTCCCAAACTCGTAAGTTGAGTGTCCCTGACTGGAAATGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGAGGAAGGGGTTTCTTTaGCTTACCTTTCCACATCAT +
Preference number: 2 (lower is better)
Translates to: QTSGDTLVCVQEAETAGMRKGFL*LTFPHH
Trigger: ATGATGTGGAAAGGTAAGCCAAAGAAACCCCTTCCT...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACTCAATGCTTTCTGGATaGGAGGAGTTTACAAGAGAA +
Preference number: 2 (lower is better)
Translates to: GCSHPVSLGFLPDKRLLHSMLSG*EEFTRE
Trigger: TTCTCTTGTAAACTCCTCCCATCCAGAAAGCATTGA...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTTGATGCAGAAGCCATaGAGGGGTGCTGCTTACTGG +
Preference number: 2 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDLMQKP*RGAAYW
Trigger: CCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAA...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCCCTCAGCCTCTTGAGTaGCTAAAACCACAGATATGG +
Preference number: 2 (lower is better)
Translates to: KRKPSLGDLSTVLYAKGLPQPLE*LKPQIW
Trigger: CCATATCTGTGGTTTTAGCCACTCAAGAGGCTGAGG...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCCACCATTATATTGTGTaGGATGTGGAGAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: KRKPSLGDLSTVLYAKGLHHYIV*DVESCG
Trigger: GCCACAGCTCTCCACATCCCACACAATATAATGGTG...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 90 bp GAATGCATATGCCTTACTCAGGGTGAACTAGGGATTAAATATCTTTaGCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTGGCTGAACAC +
Preference number: 2 (lower is better)
Translates to: ECICLTQGELGIKYL*QEGMSRKGSSLAEH
Trigger: GTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGCAAAAGATATTTAATCCCTAGTTCACCCTGAGTAAGGCATATGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp CAGTCAGGAAGCAGTTCTGCCCTAAGCATTTCCAGTCAGGGACACTCAACTTACATTAAATATGATCTGTaGCAGGTGAGAACGTACTCA +
Preference number: 2 (lower is better)
Translates to: QSGSSSALSISSQGHSTYIKYDL*QVRTYS
Trigger: TGAGTACGTTCTCACCTGTCACAGATCATATTTAAT...GTAAGTTGAGTGTCCCTGACTGGAAATGCTTAGGGCAGAACTGCTTCCTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATCTATCAGACACTCTGTaGTGTCTGGACCTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDLSDTL*CLDLEV
Trigger: CACTTCCAGGTCCAGACATCACAGAGTGTCTGATAG...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTAGAACCAACTCCTTTTaGTTTTGGTTTCCGTCACTA +
Preference number: 2 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSRTNSF*FWFPSL
Trigger: TAGTGACGGAAACCAAAAGCAAAAGGAGTTGGTTCT...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAACGAGTCTCCCTCCTCTaGCTCTTTCTTTCAAATGAA +
Preference number: 2 (lower is better)
Translates to: LKQGLTMLSNWSQTTGLQRVSLL*LFLSNE
Trigger: TTCATTTGAAAGAAAGAGGCAGAGGAGGGAGACTCG...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGAAACAAGCCAGGAATCTaGAGGAAGTTGATGCAGAAG +
Preference number: 2 (lower is better)
Translates to: HPDSSQMKYEDICSMLSGNKPGI*RKLMQK
Trigger: CTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTT...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAACTGCTCAATGCTTTCTaGATGGGAGGAGTTTACAAG +
Preference number: 2 (lower is better)
Translates to: LKQGLTMLSNWSQTTGLQLLNAF*MGGVYK
Trigger: CTTGTAAACTCCTCCCATCCAGAAAGCATTGAGCAG...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp TGCATTTCAGTCTCTCAGCAAGGTTTTATAATTCTCACACCTCAACATGCAGACGCCATCCTGAGCCACTaGGTAAGTCTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: CISVSQQGFIILTPQHADAILSH*VSLSQK
Trigger: TTTTTGAGACAGACTTACTCAGTGGCTCAGGATGGC...GTCTGCATGTTGAGGTGTGAGAATTATAAAACCTTGCTGAGAGACTGAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGAGCCAGCAGAGTGTACTaGACTTCCAAAAAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: HPDSSQMKYEDICSMLSGASRVY*TSKKKR
Trigger: TCTTTTCTTTTTGGAAGTTCAGTACACTCTGCTGGC...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTATTAATTATTACCACTaGGGATTGATTAGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSINYYH*GLISGA
Trigger: GGCTCCACTAATCAATCCTCAGTGGTAATAATTAAT...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR GCA 90 bp TGCATTTCAGTCTCTCAGCAAGGTTTTATAATTCTCACACCTCAACATGCAGACAAAGCCAAGCCTTCTTaGTTCCTCCTTCTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: CISVSQQGFIILTPQHADKAKPS*FLLLPV
Trigger: GACAGGAAGAAGGAGGAAGCAAGAAGGCTTGGCTTT...GTCTGCATGTTGAGGTGTGAGAATTATAAAACCTTGCTGAGAGACTGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp TTGAAACAGGGTCTTACCATGTTATCCAACTGGTCTCAAACTACTGGGCTCCAAAAATCAGATGATCTGTaGAAGCTTTCTGTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LKQGLTMLSNWSQTTGLQKSDDL*KLSVVW
Trigger: CCACACAACAGAAAGCTTCCACAGATCATCTGATTT...TTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATATTAATAATAGCAAGTaGGGGTGGAAAAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDINNSK*GWKSQA
Trigger: GGCTTGGCTTTTCCACCCCCACTTGCTATTATTAAT...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCACAAACTGCACTTCATaGAATCTTCTGGAATTTATC +
Preference number: 2 (lower is better)
Translates to: KRKPSLGDLSTVLYAKGLTNCTS*NLLEFI
Trigger: GATAAATTCCAGAAGATTCCATGAAGTGCAGTTTGT...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR TCA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTCCTTACAGTATCTTTaGCACTCACTTATTAACACG +
Preference number: 2 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDSLQYL*HSLINT
Trigger: CGTGTTAATAAGTGAGTGTCAAAGATACTGTAAGGA...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CCA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATAGGAGAGGTTTAATTTaGCTCATGGTTTATGTGGTT +
Preference number: 2 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDRRGLI*LMVYVV
Trigger: AACCACATAAACCATGAGCCAAATTAAACCTCTCCT...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp AACCACAGGGTGGACTCGGCCAAGGGAGGCATGGCCTaGCCAACGACCACCACTGGAGCCACTCCCACCTCA +
Preference number: 3 (lower is better)
Translates to: NHRVDSAKGGMA*PTTTTGATPTS
Trigger: TGAGGTGGGAGTGGCTCCAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp ACCCATCAGGGAGAAGAGGCCAGGTACTCTGGGGACTaGAGCCTGTCCTGTGTCCTGCAGGCCAGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: THQGEEARYSGD*SLSCVLQASLG
Trigger: ACCCAGGCTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp GGTGCAAGCTCTCAGCTACTGCCCCAGCACCATCCCTaGCTGCCTGCCTGCCTGCCTGCCTCCCACTATGTT +
Preference number: 3 (lower is better)
Translates to: GASSQLLPQHHP*LPACLPASHYV
Trigger: AACATAGTGGGAGGCAGGCAGGCAGGCAGGCAGGCAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp TTCCAAACCACAGGGTGGACTCGGCCAAGGGAGGCATaGCCTGACCAACGACCACCACTGGAGCCACTCCCA +
Preference number: 3 (lower is better)
Translates to: FQTTGWTRPREA*PDQRPPLEPLP
Trigger: TGGGAGTGGCTCCAGTGGTGGTCGTTGGTCAGGCCATGCCTCCCTTGGCCGAGTCCACCCTGTGGTTTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp CGGTCCCTGAGGCTAGGTGCCTTGGCAGATCCAACCTaGTCCTGCACACCTACAGGATTCCTGGAGAGCCGC +
Preference number: 3 (lower is better)
Translates to: RSLRLGALADPT*SCTPTGFLESR
Trigger: GCGGCTCTCCAGGAATCCTGTAGGTGTGCAGGACCAGGTTGGATCTGCCAAGGCACCTAGCCTCAGGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp GACCTAAACTGGACCAGCAGCCAGACTGGCAAAGAGTaGGCGGCCTGGCTCCAGTGCCCAGTACCACGAAGC +
Preference number: 3 (lower is better)
Translates to: DLNWTSSQTGKE*AAWLQCPVPRS
Trigger: GCTTCGTGGTACTGGGCACTGGAGCCAGGCCGCTCACTCTTTGCCAGTCTGGCTGCTGGTCCAGTTTAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp CCAGGCTGCCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGGGTGCCAC +
Preference number: 3 (lower is better)
Translates to: PGCPRTQKSACL*LPSAGIKGGCH
Trigger: GTGGCACCCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGGCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GGGGAAGAGAGACCTAAACTGGACCAGCAGCCAGACTaGCAAAGAGTGAGCGGCCTGGCTCCAGTGCCCAGT +
Preference number: 3 (lower is better)
Translates to: GEERPKLDQQPD*QRVSGLAPVPS
Trigger: ACTGGGCACTGGAGCCAGGCCGCTCACTCTTTGCCAGTCTGGCTGCTGGTCCAGTTTAGGTCTCTCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AGCAATCACCCATCAGGGAGAAGAGGCCAGGTACTCTaGGGACTGCAGCCTGTCCTGTGTCCTGCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: SNHPSGRRGQVL*GLQPVLCPAGQ
Trigger: CTGGCCTGCAGGACACAGGACAGGCTGCAGTCCCCAGAGTACCTGGCCTCTTCTCCCTGATGGGTGATTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp CTGTGGCTCCCCGTCTCCTGTGTACACAGGCATCACTaGTGTACCACTGGGAGTCTGGAACGGGGATCCTCA +
Preference number: 3 (lower is better)
Translates to: LWLPVSCVHRHH*CTTGSLERGSS
Trigger: TGAGGATCCCCGTTCCAGACTCCCAGTGGTACAGCAGTGATGCCTGTGTACACAGGAGACGGGGAGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp ACGAAGCGGGCGTGGGTCCAGGTGTGGGTGCTCTCCTaGGCAGAGGGATGGGTTAAGTCGTATTGTGAGTAC +
Preference number: 3 (lower is better)
Translates to: TKRAWVQVWVLS*AEGWVKSYCEY
Trigger: GTACTCACAATACGACTTAACCCATCCCTCTGCTCAGGAGAGCACCCACACCTGGACCCACGCCCGCTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp CAGGAAGTCATGGTAGGCACAGTGACAGAGCAGAGCTaGTCACTCGGCCAGGCATGGCCTCTTGTGATCCCA +
Preference number: 3 (lower is better)
Translates to: QEVMVGTVTEQS*SLGQAWPLVIP
Trigger: TGGGATCACAAGAGGCCATGCCTGGCCGAGTGAGCAGCTCTGCTCTGTCACTGTGCCTACCATGACTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp TGTAGACCAGGCTGCCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: CRPGCPRTQKSA*LCLPSAGIKGG
Trigger: CCCACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGGCAGCCTGGTCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp CTGGAGGAAGTTGATGCAGAAGCCATGGAGGGGTGCTaGTTACTGGCTTGCTCCCTGTGGCTTGCTCAGCTT +
Preference number: 3 (lower is better)
Translates to: LEEVDAEAMEGC*LLACSLWLAQL
Trigger: AAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp TCAAGGATGATTGCTAGCAACTGTTGGGCTGCATCCTaGCTCATTGCTGGGGTGCCTAGAGCGGCTGGCATG +
Preference number: 3 (lower is better)
Translates to: SRMIASNCWAAS*LIAGVPRAAGM
Trigger: CATGCCAGCCGCTCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GACTGCGGCTTGGGCATACGCCTCAATCTCAGCACCTaGAAGGTAGAGGCAGGAGGATTGTGGGTAGCAAGT +
Preference number: 3 (lower is better)
Translates to: DCGLGIRLNLST*KVEAGGLWVAS
Trigger: ACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCAGGTGCTGAGATTGAGGCGTATGCCCAAGCCGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp ACAGTGACAGAGCAGAGCTGCTCACTCGGCCAGGCATaGCCTCTTGTGATCCCAGCACTTCAGAGGGTTACT +
Preference number: 3 (lower is better)
Translates to: TVTEQSCSLGQA*PLVIPALQRVT
Trigger: AGTAACCCTCTGAAGTGCTGGGATCACAAGAGGCCATGCCTGGCCGAGTGAGCAGCTCTGCTCTGTCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AAGCCAGGAATCTGGAGGAAGTTGATGCAGAAGCCATaGAGGGGTGCTGCTTACTGGCTTGCTCCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: KPGIWRKLMQKP*RGAAYWLAPCG
Trigger: GCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp AGTGTGTCAACTTCCTCACAGGCCCCACCTAAGACCGCCTCTCCTGCTTCAGCATCCTGGAACCAGGGTTaGAAACCCAGCATGATCCTG +
Preference number: 3 (lower is better)
Translates to: SVSTSSQAPPKTASPASASWNQG*KPSMIL
Trigger: CAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGA...TGCTGAAGCAGGAGAGGCGGTCTTAGGTGGGGCCTGTGAGGAAGTTGACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp AATCTGGAGGAAGTTGATGCAGAAGCCATGGAGGGGTaGTGCTTACTGGCTTGCTCCCTGTGGCTTGCTCAG +
Preference number: 3 (lower is better)
Translates to: NLEEVDAEAMEG*CLLACSLWLAQ
Trigger: CTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp ATTGTAGCCCAGTTGGCTCTGGACTGGAGCTTCCTCTaGCTCGGCCTTAGTTACCACCTTGCTGGGAGGTAT +
Preference number: 3 (lower is better)
Translates to: IVAQLALDWSFL*LGLSYHLAGRY
Trigger: ATACCTCCCAGCAAGGTGGTAACTAAGGCCGAGGCAGAGGAAGCTCCAGTCCAGAGCCAACTGGGCTACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp GTGTTCTTTCTTCTCTCTGCCTCACATAGACCACGGTaGAAGCTCTCAGCTACTGCCCCAGCACCATCCCTG +
Preference number: 3 (lower is better)
Translates to: VFFLLSASHRPR*KLSATAPAPSL
Trigger: CAGGGATGGTGCTGGGGCAGTAGCTGAGAGCTTGCACCGTGGTCTATGTGAGGCAGAGAGAAGAAAGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp ACAGCAACCCAAACAAGCCAGGAATCTGGAGGAAGTTaGTGCAGAAGCCATGGAGGGGTGCTGCTTACTGGC +
Preference number: 3 (lower is better)
Translates to: TATQTSQESGGS*CRSHGGVLLTG
Trigger: GCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTTTGGGTTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp TCTCCCACCTGTAAGAGAACCATGGCAGTCACTTCCTaGAACCAGGGTTTGAAACCCAGCATGATCCTGCCC +
Preference number: 3 (lower is better)
Translates to: SPTCKRTMAVTS*NQGLKPSMILP
Trigger: GGGCAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCATGGTTCTCTTACAGGTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTaGCCCTGTTGCTGTGGACAGACCTGTGGTGGCACA +
Preference number: 3 (lower is better)
Translates to: GSWFMWFRITVA*PCCCGQTCGGT
Trigger: TGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AAGTTGATGCAGAAGCCATGGAGGGGTGCTGCTTACTaGCTTGCTCCCTGTGGCTTGCTCAGCTTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: KLMQKPWRGAAY*LAPCGLLSLLS
Trigger: AGAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGCTTCTGCATCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GGAAGTCAGGACAGCAACCCAAACAAGCCAGGAATCTaGAGGAAGTTGATGCAGAAGCCATGGAGGGGTGCT +
Preference number: 3 (lower is better)
Translates to: GSQDSNPNKPGI*RKLMQKPWRGA
Trigger: AGCACCCCTCCATGGCTTCTGCATCAACTTCCTCCAGATTCCTGGCTTGTTTGGGTTGCTGTCCTGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTAGTGGCTTGGCCCTGTaGCTGTGGACAGACCTGTGG +
Preference number: 3 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSSGLAL*LWTDLW
Trigger: CCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACT...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CAGGGATCTGGAGGTCAAGACACCAAGTCACTTCTGTaGGAACTAGAGTGTCCCACACTTGACAGTGGGACG +
Preference number: 3 (lower is better)
Translates to: QGSGGQDTKSLL*ELECPTLDSGT
Trigger: CGTCCCACTGTCAAGTGTGGGACACTCTAGTTCTCACAGAAGTGACTTGGTGTCTTGACCTCCAGATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp TCAAGCCCCCATGCTTGCAGGGCAGACACTACAAACTaGGCCACCTCCCCAGCCCAACTTATATTCTTGAGA +
Preference number: 3 (lower is better)
Translates to: SSPHACRADTTN*ATSPAQLIFLR
Trigger: TCTCAAGAATATAAGTTGGGCTGGGGAGGTGGCTCAGTTTGTAGTGTCTGCCCTGCAAGCATGGGGGCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp AAGGAGGATCGAATCCAGGACTTTGAATGCGCTAGGTaGAACACCATGGCCAAAGGCAAGCGGGAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: KEDRIQDFECAR*NTMAKGKREGR
Trigger: CCTTCCTTCCCGCTTGCCTTTGGCCATGGTGTTTCACCTAGCGCATTCAAAGTCCTGGATTCGATCCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp GGCCCCAAACTGTCTATGCAGCTGAGAGTGACTTTCTaGTCTTCCTGCCTCAACCTCCTGAGAGGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: GPKLSMQLRVTF*SSCLNLLRGVC
Trigger: ACACACACCTCTCAGGAGGTTGAGGCAGGAAGATCAGAAAGTCACTCTCAGCTGCATAGACAGTTTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CCAAGCCAGGCCAGTGACCTTCCTTGTGCCAGGAAGTaGTGCCCATATTTAGAGATGGGTCTTCCCATACCA +
Preference number: 3 (lower is better)
Translates to: PSQASDLPCARK*CPYLEMGLPIP
Trigger: TGGTATGGGAAGACCCATCTCTAAATATGGGCATCACTTCCTGGCACAAGGAAGGTCACTGGCCTGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp TTTTTGGTTCTTGTGTGTTGCCACAGTCCCACCCTCTaGCCCTTACATCGAGTCTCCCTCCTCTGCCTCTTT +
Preference number: 3 (lower is better)
Translates to: FLVLVCCHSPTL*PLHRVSLLCLF
Trigger: AAAGAGGCAGAGGAGGGAGACTCGATGTAAGGGGCAGAGGGTGGGACTGTGGCAACACACAAGAACCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp AATGCATGTCCCCTGTCAGCTCTCTGCTGTACTCTGTaGCAGGGATCTGGAGGTCAAGACACCAAGTCACTT +
Preference number: 3 (lower is better)
Translates to: NACPLSALCCTL*QGSGGQDTKSL
Trigger: AAGTGACTTGGTGTCTTGACCTCCAGATCCCTGGCACAGAGTACAGCAGAGAGCTGACAGGGGACATGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GTAGAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTaGTTGCCTAGCATGCTGGAGACACTGACCTTCATA +
Preference number: 3 (lower is better)
Translates to: VEAGGLWVASLE*LPSMLETLTFI
Trigger: TATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp CCTGTCAGCTCTCTGCTGTACTCTGTGCCAGGGATCTaGAGGTCAAGACACCAAGTCACTTCTGTGAGAACT +
Preference number: 3 (lower is better)
Translates to: PVSSLLYSVPGI*RSRHQVTSVRT
Trigger: AGTTCTCACAGAAGTGACTTGGTGTCTTGACCTCCAGATCCCTGGCACAGAGTACAGCAGAGAGCTGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GCCATGGAGGGGTGCTGCTTACTGGCTTGCTCCCTGTaGCTTGCTCAGCTTGCTTTCTTATACAATCCTAAC +
Preference number: 3 (lower is better)
Translates to: AMEGCCLLACSL*LAQLAFLYNPN
Trigger: GTTAGGATTGTATAAGAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGCACCCCTCCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GGTTTGAGGTCACTCAACCTTACCACTTCTTGTGTCTaGTGGCACAGTTCACTTGCCCCACAACCAACCAGC +
Preference number: 3 (lower is better)
Translates to: GLRSLNLTTSCV*WHSSLAPQPTS
Trigger: GCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp TGGCTTCGAAAGTCAAGGATGATTGCTAGCAACTGTTaGGCTGCATCCTGCCTCATTGCTGGGGTGCCTAGA +
Preference number: 3 (lower is better)
Translates to: WLRKSRMIASNC*AASCLIAGVPR
Trigger: TCTAGGCACCCCAGCAATGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGACTTTCGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp CAGTCAGGAAGCAGTTCTGCCCTAAGCATTTCCAGTCAGGGACACTCAACTTACAACAAACAGCCAAGTTaGCCCCCTTCCAGCCCATCT +
Preference number: 3 (lower is better)
Translates to: QSGSSSALSISSQGHSTYNKQPS*PPSSPS
Trigger: AGATGGGCTGGAAGGGGGCAAACTTGGCTGTTTGTT...GTAAGTTGAGTGTCCCTGACTGGAAATGCTTAGGGCAGAACTGCTTCCTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CTGGCTCCACACCTCAGTTCTGAGCTTCATGGGGTTTaGGGTCACTCAACCTTACCACTTCTTGTGTCTGGT +
Preference number: 3 (lower is better)
Translates to: LAPHLSSELHGV*GHSTLPLLVSG
Trigger: ACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAAGCTCAGAACTGAGGTGTGGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp GATGAAGATGTAGAACTCTCAGCTCTACCTGCACCATaGCTGCCTAGATGTTGCCCCACTCACACCTTGATG +
Preference number: 3 (lower is better)
Translates to: DEDVELSALPAP*LPRCCPTHTLM
Trigger: CATCAAGGTGTGAGTGGGGCAACATCTAGGCAGGCATGGTGCAGGTAGAGCTGAGAGTTCTACATCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp TGGCACAGTTCACTTGCCCCACAACCAACCAGCTTCTaGTATGGGCACAGATTCCTCAAAAGTGAAGGCCTT +
Preference number: 3 (lower is better)
Translates to: WHSSLAPQPTSF*YGHRFLKSEGL
Trigger: AAGGCCTTCACTTTTGAGGAATCTGTGCCCATAGCAGAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GAATCCAGGACTTTGAATGCGCTAGGTGAAACACCATaGCCAAAGGCAAGCGGGAAGGAAGGGGTTTCTTTG +
Preference number: 3 (lower is better)
Translates to: ESRTLNALGETP*PKASGKEGVSL
Trigger: CAAAGAAACCCCTTCCTTCCCGCTTGCCTTTGGCCATGGTGTTTCACCTAGCGCATTCAAAGTCCTGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp TTGAGGTCACTCAACCTTACCACTTCTTGTGTCTGGTaGCACAGTTCACTTGCCCCACAACCAACCAGCTTC +
Preference number: 3 (lower is better)
Translates to: LRSLNLTTSCVW*HSSLAPQPTSF
Trigger: GAAGCTGGTTGGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp CTTGTCACTAAACCCAGTGCTCACCAATCCCACCAGTCTGGCTACCCAGCAAACCAGAACCAACTCCTTTaGCTTTTGGTTTCCGTCACT +
Preference number: 3 (lower is better)
Translates to: LVTKPSAHQSHQSGYPANQNQLL*LLVSVT
Trigger: AGTGACGGAAACCAAAAGCAAAAGGAGTTGGTTCTG...GTTTGCTGGGTAGCCAGACTGGTGGGATTGGTGAGCACTGGGTTTAGTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp GTCACGGTGCCACCCAGACTCTTCTCAGATGAAGTATaGAGACATCTGCTCAATGCTTTCTGGATGGGAGGA +
Preference number: 3 (lower is better)
Translates to: VTVPPRLFSDEV*RHLLNAFWMGG
Trigger: TCCTCCCATCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTGGCACCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp GCAGGAAGGAATGTCCAGGAAGGGAAGCTCATTGGCTaGACACTAGGGGCCTATCTAGAGACTTCATTAGCA +
Preference number: 3 (lower is better)
Translates to: AGRNVQEGKLIG*TLGAYLETSLA
Trigger: TGCTAATGAAGTCTCTAGATAGGCCCCTAGTGTTCAGCCAATGAGCTTCCCTTCCTGGACATTCCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CGTGAGAATGCTTGGTCCCCAGTTGGTGGAACTGTTTaGAGGATTAGGAATGTGGGCTTGTTGGAAGAGGAC +
Preference number: 3 (lower is better)
Translates to: RENAWSPVGGTV*RIRNVGLLEED
Trigger: GTCCTCTTCCAACAAGCCCACATTCCTAATCCTTCAAACAGTTCCACCAACTGGGGACCAAGCATTCTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp GATGATGATTCTGGGGAATGTACTAAGTCTGGGGTCTaGAGGGATATCCAGGTGAGATGCAGACTCTCCATG +
Preference number: 3 (lower is better)
Translates to: DDDSGECTKSGV*RDIQVRCRLSM
Trigger: CATGGAGAGTCTGCATCTCACCTGGATATCCCTGCAGACCCCAGACTTAGTACATTCCCCAGAATCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTaGCTTGGCCCTGTTGCTGTGGACAGACCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: NLAHGLCGFGLQ*LGPVAVDRPVV
Trigger: CACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp CATGGCCAAAGGCAAGCGGGAAGGAAGGGGTTTCTTTaGCTTACCTTTCCACATCATAGTCCATCACCAAAG +
Preference number: 3 (lower is better)
Translates to: HGQRQAGRKGFL*LTFPHHSPSPK
Trigger: CTTTGGTGATGGACTATGATGTGGAAAGGTAAGCCAAAGAAACCCCTTCCTTCCCGCTTGCCTTTGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp TTACATGTTCCAAAGCAGGTAGAGTTTGGCAGGACCTaGCTCCACACCTCAGTTCTGAGCTTCATGGGGTTT +
Preference number: 3 (lower is better)
Translates to: LHVPKQVEFGRT*LHTSVLSFMGF
Trigger: AAACCCCATGAAGCTCAGAACTGAGGTGTGGAGCCAGGTCCTGCCAAACTCTACCTGCTTTGGAACATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AGCATGGAGAACATCAGGTTTTTAATGCTACGTGGCTaGCTGCCATGGTCCTCTCAGTGGGGTGACATTTAC +
Preference number: 3 (lower is better)
Translates to: SMENIRFLMLRG*LPWSSQWGDIY
Trigger: GTAAATGTCACCCCACTGAGAGGACCATGGCAGCCAGCCACGTAGCATTAAAAACCTGATGTTCTCCATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp AAGAGAAAGCCTTCCTTGGGAGATTTAAGCACAGTTCTTTATGCCAAAGGCCTCGTAGAGGCAGGAGGATaGTGGGTAGCAAGTCTGGAG +
Preference number: 3 (lower is better)
Translates to: KRKPSLGDLSTVLYAKGLVEAGG*WVASLE
Trigger: CTCCAGACTTGCTACCCACAATCCTCCTGCCTCTAC...GAGGCCTTTGGCATAAAGAACTGTGCTTAAATCTCCCAAGGAAGGCTTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CAAGTCACTTCTGTGAGAACTAGAGTGTCCCACACTTaGCAGTGGGACGTGTCTGTTCTTGGATACCAATGG +
Preference number: 3 (lower is better)
Translates to: QVTSVRTRVSHT*QWDVSVLGYQW
Trigger: CCATTGGTATCCAAGAACAGACACGTCCCACTGTCAAGTGTGGGACACTCTAGTTCTCACAGAAGTGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CAAACTGAGCCACCTCCCCAGCCCAACTTATATTCTTaGGATGATGGGACTGTGGTAGAGGAGCATTTTGCA +
Preference number: 3 (lower is better)
Translates to: QTEPPPQPNLYS*DDGTVVEEHFA
Trigger: TGCAAAATGCTCCTCTACCACAGTCCCATCATCTCAAGAATATAAGTTGGGCTGGGGAGGTGGCTCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp AACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTaGAACTGCAGGCATGCACCACTATACCACAGCTAT +
Preference number: 3 (lower is better)
Translates to: NFWRYSCLRPGS*NCRHAPLYHSY
Trigger: ATAGCTGTGGTATAGTGGTGCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CAAACATCTGAGGAAACTGGCTTCGAAAGTCAAGGATaGTTGCTAGCAACTGTTGGGCTGCATCCTGCCTCA +
Preference number: 3 (lower is better)
Translates to: QTSEETGFESQG*LLATVGLHPAS
Trigger: TGAGGCAGGATGCAGCCCAACAGTTGCTAGCAATCATCCTTGACTTTCGAAGCCAGTTTCCTCAGATGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GGTTTGTATATGCTTGGCTCAGGAAGTGGCACTATTTaGAGGTGTAGCCTCATTGGACTAGGTGTGTCACTG +
Preference number: 3 (lower is better)
Translates to: GLYMLGSGSGTI*RCSLIGLGVSL
Trigger: CAGTGACACACCTAGTCCAATGAGGCTACACCTCCAAATAGTGCCACTTCCTGAGCCAAGCATATACAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp TGCTTCCTCCTTCTTCCTGTCTTGTGTATCCTAGACTaGCCCCAAACTGTCTATGCAGCTGAGAGTGACTTT +
Preference number: 3 (lower is better)
Translates to: CFLLLPVLCILD*PQTVYAAESDF
Trigger: AAAGTCACTCTCAGCTGCATAGACAGTTTGGGGCCAGTCTAGGATACACAAGACAGGAAGAAGGAGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp CTGCCTCAGCCTCTTGAGTGGCTAAAACCACAGATATaGGTCACCAGTACCCAGATTGTTTTCTTCTTGCTC +
Preference number: 3 (lower is better)
Translates to: LPQPLEWLKPQI*VTSTQIVFFLL
Trigger: GAGCAAGAAGAAAACAATCTGGGTACTGGTGACCCATATCTGTGGTTTTAGCCACTCAAGAGGCTGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp CTTCCATTGAAACAGGGTCTTACCATGTTATCCAACTaGTCTCAAACTACTGGGCTCCAACGATCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LPLKQGLTMLSN*SQTTGLQRSCC
Trigger: GCAGCAGGATCGTTGGAGCCCAGTAGTTTGAGACCAGTTGGATAACATGGTAAGACCCTGTTTCAATGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp CAGTCCCAGTCTAAATCAGATGATCTGTGGAAGCTTTCTGTTGTGTGGAAGCTTTTTGGTTCTTGTGTGTaGCCACAGTCCCACCCTCTG +
Preference number: 3 (lower is better)
Translates to: QSQSKSDDLWKLSVVWKLFGSCV*PQSHPL
Trigger: CAGAGGGTGGGACTGTGGCAACACACAAGAACCAAA...AAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGACTGGGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGTGTGGCTTGCTCAGCTaGCTTTCTTATACAATCCTA +
Preference number: 3 (lower is better)
Translates to: QTSGDTLVCVQEAETAGMCGLLS*LSYTIL
Trigger: TAGGATTGTATAAGAAAGCAAGCTGAGCAAGCCACA...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CCCCTAGTCGTGTTAAGGGAACAATTCAGGGCCTTGTaGATGCTAGACAAGCACAACACTACTAAGTCACAC +
Preference number: 3 (lower is better)
Translates to: PLVVLREQFRAL*MLDKHNTTKSH
Trigger: GTGTGACTTAGTAGTGTTGTGCTTGTCTAGCATTCACAAGGCCCTGAATTGTTCCCTTAACACGACTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp ATGAAACATAAAGTAAGGCCACATTTGAGGAGTCAGTaGAATGGCCCGGAGGGTAAAGGTTCCTGCCACCAA +
Preference number: 3 (lower is better)
Translates to: MKHKVRPHLRSQ*NGPEGKGSCHQ
Trigger: TTGGTGGCAGGAACCTTTACCCTCCGGGCCATTTCACTGACTCCTCAAATGTGGCCTTACTTTATGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp TACCTGGAAGTCAGTCTTCCATTAGCAGCCTTCAGATaGAGATGTAGAACTCTCAGCTCTACCTGCACCATG +
Preference number: 3 (lower is better)
Translates to: YLEVSLPLAAFR*RCRTLSSTCTM
Trigger: CATGGTGCAGGTAGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAATGGAAGACTGACTTCCAGGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp TGTAGCTGTACAGATGGTTGTAAGCCACCATGTGATTaGTGGGATTTGAACTCAGGACCTTTGGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: CSCTDGCKPPCD*WDLNSGPLEEQ
Trigger: CTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp TTGATTAGTGGAGCCAAGACAGATACAAGGTCACGGTaGCACCCAGACTCTTCTCAGATGAAGTATGAAGAC +
Preference number: 3 (lower is better)
Translates to: LISGAKTDTRSR*HPDSSQMKYED
Trigger: GTCTTCATACTTCATCTGAGAAGAGTCTGGGTGGCACCGTGACCTTGTATCTGTCTTGGCTCCACTAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AGCTGTACAGATGGTTGTAAGCCACCATGTGATTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA +
Preference number: 3 (lower is better)
Translates to: SCTDGCKPPCDC*DLNSGPLEEQS
Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACATGGTGGCTTACAACCATCTGTACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AACATCAGGTTTTTAATGCTACGTGGCTGGCTGCCATaGTCCTCTCAGTGGGGTGACATTTACATGTTCCAA +
Preference number: 3 (lower is better)
Translates to: NIRFLMLRGWLP*SSQWGDIYMFQ
Trigger: TTGGAACATGTAAATGTCACCCCACTGAGAGGACCATGGCAGCCAGCCACGTAGCATTAAAAACCTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATACCTCAGTCTGTCTTTaGGCTGCCACCTTGCCAACT +
Preference number: 3 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDTSVCL*AATLPT
Trigger: AGTTGGCAAGGTGGCAGCCAAAAGACAGACTGAGGT...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp TGCATTTCAGTCTCTCAGCAAGGTTTTATAATTCTCACACCTCAACATGCAGACCTCCTTCTTCCTGTCTaGTGTATCCTAGACTGGCCC +
Preference number: 3 (lower is better)
Translates to: CISVSQQGFIILTPQHADLLLPV*CILDWP
Trigger: GGGCCAGTCTAGGATACACAAGACAGGAAGAAGGAG...GTCTGCATGTTGAGGTGTGAGAATTATAAAACCTTGCTGAGAGACTGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp GTCACATGTATTCTAATTACCCATCCCCCTACAACCTaGAGATTGCTTCTGCCGATCTCACGGTTCCTAGTT +
Preference number: 3 (lower is better)
Translates to: VTCILITHPPTT*RLLLPISRFLV
Trigger: AACTAGGAACCGTGAGATCGGCAGAAGCAATCTTCAGGTTGTAGGGGGATGGGTAATTAGAATACATGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp GTAACACGCACATATACAACAGTCAGGAAGCAGTTCTaGCCTAAGCATTTCCAGTCAGGGACACTCAACTTA +
Preference number: 3 (lower is better)
Translates to: VTRTYTTVRKQF*PKHFQSGTLNL
Trigger: TAAGTTGAGTGTCCCTGACTGGAAATGCTTAGGGCAGAACTGCTTCCTGACTGTTGTATATGTGCGTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTATaGCAGTTAGCATGCTTATTTGAGGCCTTGCACAAT +
Preference number: 3 (lower is better)
Translates to: AYYFRAFKVGEV*QLACLFEALHN
Trigger: ATTGTGCAAGGCCTCAAATAAGCATGCTAACTGCCATACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTaGTCAATGCTTTCTGGATGGGAGGAGTTTACAAGA +
Preference number: 3 (lower is better)
Translates to: HPDSSQMKYEDI*SMLSGWEEFTR
Trigger: TCTTGTAAACTCCTCCCATCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp AGTAGAAAGACCACGTTTTTGTTGATGTTCCTGTTTTaGAGGCATGGTCCTGTTATTGTAGCCCAGTTGGCT +
Preference number: 3 (lower is better)
Translates to: SRKTTFLLMFLF*RHGPVIVAQLA
Trigger: AGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAGGAACATCAACAAAAACGTGGTCTTTCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp GTTATTACAGGTAACTGCTATCACACCAGTCAGTGGTaGCACATACCATTAATCCCAGCATACCAAAGGCAA +
Preference number: 3 (lower is better)
Translates to: VITGNCYHTSQW*HIPLIPAYQRQ
Trigger: TTGCCTTTGGTATGCTGGGATTAATGGTATGTGCCACCACTGACTGGTGTGATAGCAGTTACCTGTAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGTTGGGCACACAAATTaGAAGCAATTTGAAGTTTGT +
Preference number: 3 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSVGHTN*KQFEVC
Trigger: ACAAACTTCAAATTGCTTCAAATTTGTGTGCCCAAC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp AACCAGCTTCTGCTATGGGCACAGATTCCTCAAAAGTaGAGGCCTTTTCAAACTACCCACCATTATATTGTG +
Preference number: 3 (lower is better)
Translates to: NQLLLWAQIPQK*RPFQTTHHYIV
Trigger: CACAATATAATGGTGGGTAGTTTGAAAAGGCCTTCACTTTTGAGGAATCTGTGCCCATAGCAGAAGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATTGTGATTGCTGGGATTaGAACTCAGGACCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDCDCWD*NSGPLE
Trigger: TTCCAAAGGTCCTGAGTTCAAATCCCAGCAATCACA...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp TTTACAGCCCAGGTATTAATTATTACCACTGAGGATTaGTTAGTGGAGCCAAGACAGATACAAGGTCACGGT +
Preference number: 3 (lower is better)
Translates to: FTAQVLIITTED*LVEPRQIQGHG
Trigger: ACCGTGACCTTGTATCTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp GACTGCTTTTACAGCCCAGGTATTAATTATTACCACTaGGGATTGATTAGTGGAGCCAAGACAGATACAAGG +
Preference number: 3 (lower is better)
Translates to: DCFYSPGINYYH*GLISGAKTDTR
Trigger: CCTTGTATCTGTCTTGGCTCCACTAATCAATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp CCTTGGTCATGGTGTTCTGTTATGCCGGGAGAAAAGTaGCTAAGAAACACAGATCATCATCATCATCATCAT +
Preference number: 3 (lower is better)
Translates to: PWSWCSVMPGEK*LRNTDHHHHHH
Trigger: ATGATGATGATGATGATGATCTGTGTTTCTTAGTCACTTTTCTCCCGGCATAACAGAACACCATGACCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR GCA 72 bp AGCCAGCCCCAGTTAAATGTTGTCCTTTATAAGACTTaGCTTGATCATGTATCTGTTCACAGCAGTAAAACC +
Preference number: 3 (lower is better)
Translates to: SQPQLNVVLYKT*LDHVSVHSSKT
Trigger: GGTTTTACTGCTGTGAACAGATACATGATCAAGGCAAGTCTTATAAAGGACAACATTTAACTGGGGCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CCA 72 bp TCTAAATCAGATGATCTGTGGAAGCTTTCTGTTGTGTaGAAGCTTTCTGTTGCTGAGATAAACACCCAAGGT +
Preference number: 3 (lower is better)
Translates to: SKSDDLWKLSVV*KLSVAEINTQG
Trigger: ACCTTGGGTGTTTATCTCAGCAACAGAAAGCTTCCACACAACAGAAAGCTTCCACAGATCATCTGATTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR-3UTR CAA 90 bp CTAAGCATTTCCAGTCAGGGACACTCAACTTACGAGTTTGGGAAATTTAGACATAAGGAGAGGTTTAATTaGGCTCATGGTTTATGTGGT +
Preference number: 3 (lower is better)
Translates to: LSISSQGHSTYEFGKFRHKERFN*AHGLCG
Trigger: ACCACATAAACCATGAGCCAAATTAAACCTCTCCTT...ATGTCTAAATTTCCCAAACTCGTAAGTTGAGTGTCCCTGACTGGAAATGCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp AGGTCCTCTGCAAGAGCACGTGTTCTTCTTAATCACTaGGTCAACTCTCCAGCTGTAGATTTTAATTTTATT +
Preference number: 3 (lower is better)
Translates to: RSSARARVLLNH*VNSPAVDFNFI
Trigger: AATAAAATTAAAATCTACAGCTGGAGAGTTGACTCAGTGATTAAGAAGAACACGTGCTCTTGCAGAGGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp TTATTATTATTTGTGCATAGCTCACCTTCAACTGAGTaGCTTTCAGATCTTTTATGTTCCTGGGGATGCATC +
Preference number: 3 (lower is better)
Translates to: LLLFVHSSPSTE*LSDLLCSWGCI
Trigger: GATGCATCCCCAGGAACATAAAAGATCTGAAAGTCACTCAGTTGAAGGTGAGCTATGCACAAATAATAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR TCA 72 bp TCCCACTATGTTTCCCACCATGATGATCATGAACCATaGGCCTCCAACTATAAGTTATATATAACTATATTA +
Preference number: 3 (lower is better)
Translates to: SHYVSHHDDHEP*ASNYKLYITIL
Trigger: TAATATAGTTATATATAACTTATAGTTGGAGGCTCATGGTTCATGATCATCATGGTGGGAAACATAGTGGGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR GCA 90 bp CAAACTTCTGGAGATACTCTTGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGCAGCAAGGAGGAGCCTaGCTCCGGGCCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: QTSGDTLVCVQEAETAGMQQGGA*LRAQRP
Trigger: TGGGCGCTGGGCCCGGAGGCAGGCTCCTCCTTGCTG...CATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp TACAATAGTGATGCTCGGTCCCTGAGGCTAGGTGCCTaGGCAGATCCAACCTGGTCCTGCACACCTACAGGA +
Preference number: 4 (lower is better)
Translates to: YNSDARSLRLGA*ADPTWSCTPTG
Trigger: TCCTGTAGGTGTGCAGGACCAGGTTGGATCTGCCAAGGCACCTAGCCTCAGGGACCGAGCATCACTATTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp CTGTTTTGGAGGCATGGTCCTGTTATTGTAGCCCAGTaGGCTCTGGACTGGAGCTTCCTCTGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LFWRHGPVIVAQ*ALDWSFLCLGL
Trigger: AAGGCCGAGGCAGAGGAAGCTCCAGTCCAGAGCCAACTGGGCTACAATAACAGGACCATGCCTCCAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR GCA 90 bp GGGTGCTCTCACCCTGTGTCCCTCGGATTTCTTCCGGATAAACGACTTTTACACAGTTCTACCCATGACTaGCACAGCAGCAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GCSHPVSLGFLPDKRLLHSSTHD*HSSRPG
Trigger: CCCAGGCCTGCTGCTGTGGCAGTCATGGGTAGAACT...GTGTAAAAGTCGTTTATCCGGAAGAAATCCGAGGGACACAGGGTGAGAGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp GAGGCAGGAGGATTGTGGGTAGCAAGTCTGGAGTGGTaGCCTAGCATGCTGGAGACACTGACCTTCATACGT +
Preference number: 4 (lower is better)
Translates to: EAGGLWVASLEW*PSMLETLTFIR
Trigger: ACGTATGAAGGTCAGTGTCTCCAGCATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp CTCAATCTCAGCACCTGGAAGGTAGAGGCAGGAGGATaGTGGGTAGCAAGTCTGGAGTGGTTGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: LNLSTWKVEAGG*WVASLEWLPSM
Trigger: CATGCTAGGCAACCACTCCAGACTTGCTACCCACAATCCTCCTGCCTCTACCTTCCAGGTGCTGAGATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp TGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTaGGCCCTGTTGCTGTGGACAGACCTGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: WLMVYVVSDYSG*ALLLWTDLWWH
Trigger: GTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp GCTGCTTACTGGCTTGCTCCCTGTGGCTTGCTCAGCTaGCTTTCTTATACAATCCTAACCCCTAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAYWLAPCGLLS*LSYTILTPSPR
Trigger: CCTGGGGCTAGGGGTTAGGATTGTATAAGAAAGCAAGCTGAGCAAGCCACAGGGAGCAAGCCAGTAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp GTTGCACAGGCTGACCCCAAACTTCTGGAGATACTCTaGTCTGCGTCCAGGAAGCTGAAACTGCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: VAQADPKLLEIL*SASRKLKLQAC
Trigger: GCATGCCTGCAGTTTCAGCTTCCTGGACGCAGACAAGAGTATCTCCAGAAGTTTGGGGTCAGCCTGTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR CCA 90 bp AGTGTGTCAACTTCCTCACAGGCCCCACCTAAGACCGCCTCTCCTGCTTCAGCACCAAAGACACAACGGTaGGATCAGAATACAGCCATC +
Preference number: 4 (lower is better)
Translates to: SVSTSSQAPPKTASPASAPKTQR*DQNTAI
Trigger: GATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGG...TGCTGAAGCAGGAGAGGCGGTCTTAGGTGGGGCCTGTGAGGAAGTTGACACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp AAGAGAACCATGGCAGTCACTTCCTGGAACCAGGGTTaGAAACCCAGCATGATCCTGCCCCATCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: KRTMAVTSWNQG*KPSMILPHLGT
Trigger: TGTACCCAGATGGGGCAGGATCATGCTGGGTTTCAAACCCTGGTTCCAGGAAGTGACTGCCATGGTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp GTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTaGCTGTGGACAGACCTGTGGTGGCACAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VYVVSDYSGLAL*LWTDLWWHRKS
Trigger: TGACTTCCTGTGCCACCACAGGTCTGTCCACAGCAACAGGGCCAAGCCACTGTAATCCGAAACCACATAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR TCA 90 bp TTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTTGCCAGCTGCTGGTGTTaGGGCTGGGGCTTCCGACGA +
Preference number: 4 (lower is better)
Translates to: FNLAHGLCGFGLQWLGPVASCWC*GWGFRR
Trigger: TCGTCGGAAGCCCCAGCCTCAACACCAGCAGCTGGC...AACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR TCA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTCTTCAGTTCTACCCATaGCTGCCACAGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSLQFYP*LPQQQA
Trigger: GGCCTGCTGCTGTGGCAGTCATGGGTAGAACTGAAG...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR TCA 90 bp CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGATACGGCCAGCAGCGCTaGGCACAACAGCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: HPDSSQMKYEDICSMLSGYGQQR*AQQQGG
Trigger: TCCTCCTTGCTGTTGTGCTCAGCGCTGCTGGCCGTA...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp TTGCTTTCTTATACAATCCTAACCCCTAGCCCCAGGTaGGTACCACCCACAATGTTCTGGGCCCTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLSYTILTPSPR*VPPTMFWALLH
Trigger: ATGCAGGAGGGCCCAGAACATTGTGGGTGGTACCAACCTGGGGCTAGGGGTTAGGATTGTATAAGAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp TTCATGGGGTTTGAGGTCACTCAACCTTACCACTTCTaGTGTCTGGTGGCACAGTTCACTTGCCCCACAACC +
Preference number: 4 (lower is better)
Translates to: FMGFEVTQPYHF*CLVAQFTCPTT
Trigger: GGTTGTGGGGCAAGTGAACTGTGCCACCAGACACAAGAAGTGGTAAGGTTGAGTGACCTCAAACCCCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp TTTGTAGGCATAACACAGAACCAACTCCTTTTGCTTTaGGTTTCCGTCACTAACCCCGAGACCACAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FVGITQNQLLLL*VSVTNPETTEK
Trigger: CTTCTCTGTGGTCTCGGGGTTAGTGACGGAAACCAAAAGCAAAAGGAGTTGGTTCTGTGTTATGCCTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp AATAATAGCAAGTGGGGGTGGAAAAGCCAAGCCTTCTaGCTTCCTCCTTCTTCCTGTCTTGTGTATCCTAGA +
Preference number: 4 (lower is better)
Translates to: NNSKWGWKSQAF*LPPSSCLVYPR
Trigger: TCTAGGATACACAAGACAGGAAGAAGGAGGAAGCAAGAAGGCTTGGCTTTTCCACCCCCACTTGCTATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp CAGATATGGGTCACCAGTACCCAGATTGTTTTCTTCTaGCTCTTCCAGTTTCCCCTCTCAGCATTACACTTC +
Preference number: 4 (lower is better)
Translates to: QIWVTSTQIVFF*LFQFPLSALHF
Trigger: GAAGTGTAATGCTGAGAGGGGAAACTGGAAGAGCAAGAAGAAAACAATCTGGGTACTGGTGACCCATATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp CAGCACAATGGCCACACTGCAGCCTCTCTTCCAGAGTaGGAAAGAGGCCATTTAATACTTTCAAGTAACAGT +
Preference number: 4 (lower is better)
Translates to: QHNGHTAASLPE*ERGHLILSSNS
Trigger: ACTGTTACTTGAAAGTATTAAATGGCCTCTTTCCAACTCTGGAAGAGAGGCTGCAGTGTGGCCATTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR CCA 90 bp TTCCACCTATGTCTGGTAGGCCTACTACTTCAGGGCATTCAAAGTTGGGGAAGTGCTAAATTAGCCTCTTaGGAATCTCTCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: FHLCLVGLLLQGIQSWGSAKLAS*ESLFFS
Trigger: ACTGAAGAAGAGAGATTCCCAAGAGGCTAATTTAGC...ACTTCCCCAACTTTGAATGCCCTGAAGTAGTAGGCCTACCAGACATAGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR GCA 90 bp CACCCAGACTCTTCTCAGATGAAGTATGAAGACATCTGCTCAATGCTTTCTGGACAAGCCTTGGGAATCTaGAACATTTCCTACTATAGA +
Preference number: 4 (lower is better)
Translates to: HPDSSQMKYEDICSMLSGQALGI*NISYYR
Trigger: TCTATAGTAGGAAATGTTGCAGATTCCCAAGGCTTG...TCCAGAAAGCATTGAGCAGATGTCTTCATACTTCATCTGAGAAGAGTCTGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR GCA 90 bp CTAAGCATTTCCAGTCAGGGACACTCAACTTACGAGTTTGGGAAATTTAGACATATCTTGTGTCAGCCTTaGCATACTCTTTCCATAAAG +
Preference number: 4 (lower is better)
Translates to: LSISSQGHSTYEFGKFRHILCQP*HTLSIK
Trigger: CTTTATGGAAAGAGTATGGCAAGGCTGACACAAGAT...ATGTCTAAATTTCCCAAACTCGTAAGTTGAGTGTCCCTGACTGGAAATGCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
3UTR CAA 72 bp ACATATGCAAGTATACATCTGTGTGCAAACCAAACATaGATGCTTAGTGCCTTCAATTGCTCTAGCATAATT +
Preference number: 4 (lower is better)
Translates to: TYASIHLCANQT*MLSAFNCSSII
Trigger: AATTATGCTAGAGCAATTGAAGGCACTAAGCATCAATGTTTGGTTTGCACACAGATGTATACTTGCATATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR CAA 90 bp CTCAACATGCAGACTGCTTTTACAGCCCAGGTATTAATTATTACCACTGAGGATCAGAATACAGCCATCTaGTGTCAGCCTTGCCATACT +
Preference number: 5 (lower is better)
Translates to: LNMQTAFTAQVLIITTEDQNTAI*CQPCHT
Trigger: AGTATGGCAAGGCTGACACAAGATGGCTGTATTCTG...ATCCTCAGTGGTAATAATTAATACCTGGGCTGTAAAAGCAGTCTGCATGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS-3UTR CAA 90 bp TTTAATTTGGCTCATGGTTTATGTGGTTTCGGATTACAGTGGCTTGGCCCTGTTCATCTTGTGTCAGCCTaGCCATACTCTTTCCATAAA +
Preference number: 5 (lower is better)
Translates to: FNLAHGLCGFGLQWLGPVHLVSA*PYSFHK
Trigger: TTTATGGAAAGAGTATGGCAAGGCTGACACAAGATG...AACAGGGCCAAGCCACTGTAATCCGAAACCACATAAACCATGAGCCAAATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS TCA 72 bp GCGCAGGCCCAGCGCGCACCCTACGGCCAGCAGCGCTaGGCACAACAGCAAGGAGGAGCCTGCCTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: AQAQRAPYGQQR*AQQQGGACLRA
Trigger: GGCCCGGAGGCAGGCTCCTCCTTGCTGTTGTGCTCAGCGCTGCTGGCCGTAGGGTGCGCGCTGGGCCTGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS TCA 72 bp CCAAATAGACCCAGAGGTAGAGCCAGCTGCTGGTGTTaGGGCTGGGGCTTCCGACGAGCCACTCGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: PNRPRGRASCWC*GWGFRRATRGR
Trigger: TCTTCCCCGAGTGGCTCGTCGGAAGCCCCAGCCTCAACACCAGCAGCTGGCTCTACCTCTGGGTCTATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS CCA 72 bp CTAGGACAACAGTCAGGATTTCCAAAGACACAACGGTaGGATCAGAATACAGCCATCTTGTGTCAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: LGQQSGFPKTQR*DQNTAILCQPC
Trigger: GCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGGAAATCCTGACTGTTGTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS GCA 72 bp CGGTGGGATCAGAATACAGCCATCTTGTGTCAGCCTTaGCATACTCTTTCCATAAAGATGCAATCAAGCCTT +
Preference number: 6 (lower is better)
Translates to: RWDQNTAILCQP*HTLSIKMQSSL
Trigger: AAGGCTTGATTGCATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS CAA 72 bp ACGGTGGGATCAGAATACAGCCATCTTGTGTCAGCCTaGCCATACTCTTTCCATAAAGATGCAATCAAGCCT +
Preference number: 6 (lower is better)
Translates to: TVGSEYSHLVSA*PYSFHKDAIKP
Trigger: AGGCTTGATTGCATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS CAA 72 bp CCAAAGACACAACGGTGGGATCAGAATACAGCCATCTaGTGTCAGCCTTGCCATACTCTTTCCATAAAGATG +
Preference number: 6 (lower is better)
Translates to: PKTQRWDQNTAI*CQPCHTLSIKM
Trigger: CATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10
CDS CAA 90 bp TCAGGATTTCCAAAGACACAACGGTGGGATCAGAATACAGCCATCTaGTGTCAGCCTTGCCATACTCTTTCCATAAAGATGCAATCAAGC +
Preference number: 6 (lower is better)
Translates to: SGFPKTQRWDQNTAI*CQPCHTLSIKMQSS
Trigger: GCTTGATTGCATCTTTATGGAAAGAGTATGGCAAGGCTGACACAAGATGGCTGTATTCTGATCCCACCGTTGTGTCTTTGGAAATCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022494.10