Pregenerated sensors for EBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031168Ensembl transcript IDs: ENSMUST00000033509.15, ENSMUST00000143223.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCAACCTGTGCGAGGAGGAAGAAGATTTGAGTCTTCTGGGAAGTaGGGAGAGCGCCTCATCAGCAGGGACTCAGCCCACTCTCCGGCT | + |
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Preference number: 1 (lower is better) Translates to: PQPVRGGRRFESSGK*GERLISRDSAHSPA Trigger: AGCCGGAGAGTGGGCTGAGTCCCTGCTGATGAGGCGCTCTCCTCACTTCCCAGAAGACTCAAATCTTCTTCCTCCTCGCACAGGTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| 3UTR GCA 90 bp | AGACATTTTATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTaGCACCTTCTCATCCATCTTTTCCCTCAGGTTCCTAGCAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: RHFISWFGKLPPSRT*HLLIHLFPQVPSSS Trigger: GCTACTGCTAGGAACCTGAGGGAAAAGATGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATAAAATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTCTCATCCATCGTTCCCTTCCTTTTCTaGCTCTGGCCCTTTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: FPGLGSCHRHGLATFSSIVPFLF*LWPFVC Trigger: GCACACAAAGGGCCAGAGTCAGAAAAGGAAGGGAAC...GATGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| 3UTR-3UTR TCA 90 bp | GCCACCTTCTCATCCATCTTTTCCCTCAGGTTCCTAGCAGTAGCTCAACTTGTTGAGTCTTCTGGGAAGTaGGGAGAGCGCCTCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: ATFSSIFSLRFLAVAQLVESSGK*GERLIS Trigger: GCTGATGAGGCGCTCTCCTCACTTCCCAGAAGACTC...AACAAGTTGAGCTACTGCTAGGAACCTGAGGGAAAAGATGGATGAGAAGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| 3UTR GCA 72 bp | ATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTaGCACCTTCTCATCCATCTTTTCCCTCAGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ISWFGKLPPSRT*HLLIHLFPQVP Trigger: AGGAACCTGAGGGAAAAGATGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| 3UTR TCA 72 bp | TTCCTAGCAGTAGCTCAACTTGTTCCCTTCCTTTTCTaGCTCTGGCCCTTTGTGTGCTCACTCATCATGTTT | + |
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Preference number: 3 (lower is better) Translates to: FLAVAQLVPFLF*LWPFVCSLIMF Trigger: AAACATGATGAGTGAGCACACAAAGGGCCAGAGTCAGAAAAGGAAGGGAACAAGTTGAGCTACTGCTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR GCA 90 bp | CTGGGAAGTGAGGAGAGCGCCTCATCAGCAGGGACTCAGCCCACTCTCCGGCTCGGTCTTCTAAAAGGATaGCATTGTAGAGAGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: LGSEESASSAGTQPTLRLGLLKG*HCRERT Trigger: GGTTCTCTCTCTACAATGGCATCCTTTTAGAAGACC...GAGCCGGAGAGTGGGCTGAGTCCCTGCTGATGAGGCGCTCTCCTCACTTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR GCA 90 bp | GATTTGAGTCTTCTGGGAAGTGAGGAGAGCGCCTCATCAGCAGGGACTCAGCCCCATCAAGCACAAGGATaGTTGGTATCACCAACCATA | + |
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Preference number: 4 (lower is better) Translates to: DLSLLGSEESASSAGTQPHQAQG*LVSPTI Trigger: TATGGTTGGTGATACCAAGCATCCTTGTGCTTGATG...GGGCTGAGTCCCTGCTGATGAGGCGCTCTCCTCACTTCCCAGAAGACTCAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR CCA 90 bp | AAGACATTTTATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTTAGGCCCCCAGAGATaGAGAAGAGGCCAACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KTFYFLVWEVATVTDLPPLGPQR*RRGQPG Trigger: TCCTGGTTGGCCTCTTCTCCATCTCTGGGGGCCTAA...AGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATAAAATGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| 3UTR CAA 72 bp | TATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTaGCCACCTTCTCATCCATCTTTTCCCTCAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YFLVWEVATVTD*PPSHPSFPSGS Trigger: GGAACCTGAGGGAAAAGATGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR TCA 90 bp | TATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTCTCATCCACGATCACAAGGTGAATaGAGGTACACACAGCAAACC | + |
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Preference number: 4 (lower is better) Translates to: YFLVWEVATVTDLPPSHPRSQGE*RYTQQT Trigger: GGTTTGCTGTGTGTACCTTCATTCACCTTGTGATCG...TGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR CCA 90 bp | ACATTTTATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTCTAAGCGGAAGGGCTGTTaGCGGAGAAAGGCAATCACT | + |
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Preference number: 4 (lower is better) Translates to: TFYFLVWEVATVTDLPPSKRKGC*RRKAIT Trigger: AGTGATTGCCTTTCTCCGCCAACAGCCCTTCCGCTT...AGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATAAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR CCA 90 bp | TTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTCTCATCCATCTGGGATAAGAAGGCTTaGTCTTCTAAAAGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: FPGLGSCHRHGLATFSSIWDKKA*SSKRMP Trigger: TGGCATCCTTTTAGAAGACCAAGCCTTCTTATCCCA...GATGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR CCA 90 bp | TATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTCTCATCCATACTCTTTCCAGAGTTaGGATAAGAAGGCTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YFLVWEVATVTDLPPSHPYSFQS*DKKAWS Trigger: AGACCAAGCCTTCTTATCCCAACTCTGGAAAGAGTA...TGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| 3UTR CAA 72 bp | CTCAACTTGTTCCCTTCCTTTTCTGACTCTGGCCCTTaGTGTGCTCACTCATCATGTTTGAGTGGGACAAGT | + |
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Preference number: 4 (lower is better) Translates to: LNLFPSFSDSGP*CAHSSCLSGTS Trigger: ACTTGTCCCACTCAAACATGATGAGTGAGCACACAAAGGGCCAGAGTCAGAAAAGGAAGGGAACAAGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR CCA 90 bp | AGACATTTTATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTATCGGCTATCTCCCTTaGAATACTCTTTCCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: RHFISWFGKLPPSRTCHLIGYLP*NTLSRV Trigger: AACTCTGGAAAGAGTATTCCAAGGGAGATAGCCGAT...AAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATAAAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS CCA 90 bp | ACACACAGCAAACCAGCACAAGGCCAGTCGCCGCCCAGCTCCAAGTaGGACGACGGAAGCTCGGCTAGACAACAGCCACGTGATCACAAT | + |
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Preference number: 5 (lower is better) Translates to: THSKPAQGQSPPSSK*DDGSSARQQPRDHN Trigger: ATTGTGATCACGTGGCTGTTGTCTAGCCGAGCTTCCGTCGTCCCACTTGGAGCTGGGCGGCGACTGGCCTTGTGCTGGTTTGCTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033509.15 ENSMUST00000143223.2 |
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| CDS CCA 90 bp | TGGCCCATAGACACCACAAGCTGTAGGACAAAGCGGAAGGGCTGTTaGCGGAGAAAGGCAATCACTACCCATAGGCTGAGTGGTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: WPIDTTSCRTKRKGC*RRKAITTHRLSGPQ Trigger: CTGGGGACCACTCAGCCTATGGGTAGTGATTGCCTTTCTCCGCCAACAGCCCTTCCGCTTTGTCCTACAGCTTGTGGTGTCTATGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS TCA 90 bp | GGATGCCATTGTAGAGAGAGAACCAGCCCTCGATCACAAGGTGAATaGAGGTACACACAGCAAACCAGCACAAGGCCAGTCGCCGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GCHCRERTSPRSQGE*RYTQQTSTRPVAAQ Trigger: CTGGGCGGCGACTGGCCTTGTGCTGGTTTGCTGTGTGTACCTTCATTCACCTTGTGATCGAGGGCTGGTTCTCTCTCTACAATGGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033509.15 ENSMUST00000143223.2 |
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| CDS-3UTR CAA 90 bp | TTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTCTCATCCATCTCATTAGGCACGAAGTaGTCCAGCTTCAGGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: FPGLGSCHRHGLATFSSISLGTK*SSFRCL Trigger: CAGGCACCTGAAGCTGGACAACTTCGTGCCTAATGA...GATGGATGAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR CAA 90 bp | CATTTTATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTCTCAAAGCGGAAGGGCTGTaGGCGGAGAAAGGCAATCAC | + |
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Preference number: 5 (lower is better) Translates to: HFISWFGKLPPSRTCHLLKAEGL*AEKGNH Trigger: GTGATTGCCTTTCTCCGCCAACAGCCCTTCCGCTTT...GAGAAGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS GCA 90 bp | ATTTTCATGACTTTGCTGTCCAGCACGCTCTGGGCACTAGTGAGATaGTTTATGGCATCAAGCACAAGGATGCTTGGTATCACCAACCAT | + |
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Preference number: 5 (lower is better) Translates to: IFMTLLSSTLWALVR*FMASSTRMLGITNH Trigger: ATGGTTGGTGATACCAAGCATCCTTGTGCTTGATGCCATAAAGCATCTCACTAGTGCCCAGAGCGTGCTGGACAGCAAAGTCATGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS-3UTR CAA 90 bp | AAGACATTTTATTTCCTGGTTTGGGAAGTTGCCACCGTCACGGACTTGCCACCTTATCGGCTATCTCCCTaGGAATACTCTTTCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: KTFYFLVWEVATVTDLPPYRLSP*EYSFQS Trigger: ACTCTGGAAAGAGTATTCCAAGGGAGATAGCCGATA...AGGTGGCAAGTCCGTGACGGTGGCAACTTCCCAAACCAGGAAATAAAATGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS CCA 90 bp | TTATGCTTGCTCTTAATTTTCATGACTTTGCTGTCCAGCACGCTCTaGGCACTAGTGAGATGCTTTATGGCATCAAGCACAAGGATGCTT | + |
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Preference number: 5 (lower is better) Translates to: LCLLLIFMTLLSSTL*ALVRCFMASSTRML Trigger: AAGCATCCTTGTGCTTGATGCCATAAAGCATCTCACTAGTGCCCAGAGCGTGCTGGACAGCAAAGTCATGAAAATTAAGAGCAAGCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS CCA 72 bp | AAACCAGCACAAGGCCAGTCGCCGCCCAGCTCCAAGTaGGACGACGGAAGCTCGGCTAGACAACAGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: KPAQGQSPPSSK*DDGSSARQQPR Trigger: ACGTGGCTGTTGTCTAGCCGAGCTTCCGTCGTCCCACTTGGAGCTGGGCGGCGACTGGCCTTGTGCTGGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033509.15 ENSMUST00000143223.2 |
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| CDS CAA 90 bp | AGGCCAACCAGGATATGCGAAGTCGGGAGGTCATTAGGCACGAAGTaGTCCAGCTTCAGGTGCCTGGGCCAGTACGGGTGCAAGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: RPTRICEVGRSLGTK*SSFRCLGQYGCKGT Trigger: GGTCCCCTTGCACCCGTACTGGCCCAGGCACCTGAAGCTGGACAACTTCGTGCCTAATGACCTCCCGACTTCGCATATCCTGGTTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033509.15 ENSMUST00000143223.2 |
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| CDS GCA 72 bp | GGGAGGTCATTAGGCACGAAGTTGTCCAGCTTCAGGTaGCTGGGCCAGTACGGGTGCAAGGGGACCGTATTG | + |
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Preference number: 6 (lower is better) Translates to: GRSLGTKLSSFR*LGQYGCKGTVL Trigger: CAATACGGTCCCCTTGCACCCGTACTGGCCCAGGCACCTGAAGCTGGACAACTTCGTGCCTAATGACCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033509.15 ENSMUST00000143223.2 |
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| CDS GCA 72 bp | AGGCCCCCAGAGATGGAGAAGAGGCCAACCAGGATATaGGAAGTCGGGAGGTCATTAGGCACGAAGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RPPEMEKRPTRI*EVGRSLGTKLS Trigger: GGACAACTTCGTGCCTAATGACCTCCCGACTTCGCATATCCTGGTTGGCCTCTTCTCCATCTCTGGGGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033509.15 ENSMUST00000143223.2 |
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| CDS CCA 72 bp | GACACCACAAGCTGTAGGACAAAGCGGAAGGGCTGTTaGCGGAGAAAGGCAATCACTACCCATAGGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: DTTSCRTKRKGC*RRKAITTHRLS Trigger: ACTCAGCCTATGGGTAGTGATTGCCTTTCTCCGCCAACAGCCCTTCCGCTTTGTCCTACAGCTTGTGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS CCA 72 bp | CTCTTAATTTTCATGACTTTGCTGTCCAGCACGCTCTaGGCACTAGTGAGATGCTTTATGGCATCAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: LLIFMTLLSSTL*ALVRCFMASST Trigger: TGTGCTTGATGCCATAAAGCATCTCACTAGTGCCCAGAGCGTGCTGGACAGCAAAGTCATGAAAATTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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| CDS CCA 72 bp | AGTGAGATGCTTTATGGCATCAAGCACAAGGATGCTTaGTATCACCAACCATACAGCATTCAGGAAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: SEMLYGIKHKDA*YHQPYSIQENK Trigger: TTTGTTTTCCTGAATGCTGTATGGTTGGTGATACCAAGCATCCTTGTGCTTGATGCCATAAAGCATCTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033509.15 |
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