Pregenerated sensors for EBNA1BP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028729Ensembl transcript IDs: ENSMUST00000030501.15, ENSMUST00000147373.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTGGGCACCGGCAGTGAGAACGAGATACAAACGCCCATTACCTTaGCTGATCACCATCAACACTGTACACATATACACTATAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: LWAPAVRTRYKRPLP*LITINTVHIYTIAI Trigger: AATGGCTATAGTGTATATGTGTACAGTGTTGATGGTGATCAGTCAAGGTAATGGGCGTTTGTATCTCGTTCTCACTGCCGGTGCCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAATCCCAACACTCCGGAGGCAGAGGCAGGGGCAGGCAATGTCTGTTGTGCTGGGATTACAGGTGTaGACCACAACAGCCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: ALIPTLRRQRQGQAMSVVLGLQV*TTTAQQ Trigger: CTGTTGGGCTGTTGTGGTGCACACCTGTAATCCCAG...CACAACAGACATTGCCTGCCCCTGCCTCTGCCTCCGGAGTGTTGGGATTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR TCA 90 bp | TGGGGATGCCAGCAAGCCTACAATCCCAGCACTAGGAGGCAGAGGGAGGGGGAGGAAAGCACAAGTTCCTaGGATGATAAAATGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: WGCQQAYNPSTRRQREGEESTSS*DDKMAE Trigger: CTCTGCCATTTTATCATCTCAGGAACTTGTGCTTTC...CTCCCCCTCCCTCTGCCTCCTAGTGCTGGGATTGTAGGCTTGCTGGCATCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | ACCTTAATTGTGAAGTGGGCAGTGTTTAACGTGAGAAAGGGAGACAGGGTAGAGAGAAGCAGGAAGCTCTaGGCACCGGCAGTGAGAACG | + |
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Preference number: 2 (lower is better) Translates to: TLIVKWAVFNVRKGDRVERSRKL*APAVRT Trigger: CGTTCTCACTGCCGGTGCCCAGAGCTTCCTGCTTCT...CTCTACCCTGTCTCCCTTTCTCACGTTAAACACTGCCCACTTCACAATTAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR GCA 90 bp | ACACCTAATAGTGCCACTCCCAGGGCCAAGAATATGCAAACCATCACAGGTATAGAGATCTCCTGCCTCTaGCTCCCAAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: TPNSATPRAKNMQTITGIEISCL*LPSAGI Trigger: AATCCCAGCACTTGGGAGGCAGAGGCAGGAGATCTC...TATACCTGTGATGGTTTGCATATTCTTGGCCCTGGGAGTGGCACTATTAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGGAGACAGGGTAGAGAGAGCCATAAAAACTGAGTGTCTACAGCACAGAAAGGGCATCTCTCTGTaGCCCTGGCTGTCCCAAACT | + |
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Preference number: 2 (lower is better) Translates to: RKGDRVERAIKTECLQHRKGISL*PWLSQT Trigger: AGTTTGGGACAGCCAGGGCCACAGAGAGATGCCCTT...TCTGTGCTGTAGACACTCAGTTTTTATGGCTCTCTCTACCCTGTCTCCCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR CAA 90 bp | GCTCTGGGCACCGGCAGTGAGAACGAGATACAAACGCCCATTACCTaGACTGATCACCATCAACACTGTACACATATACACTATAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ALGTGSENEIQTPIT*TDHHQHCTHIHYSH Trigger: ATGGCTATAGTGTATATGTGTACAGTGTTGATGGTGATCAGTCAAGGTAATGGGCGTTTGTATCTCGTTCTCACTGCCGGTGCCCAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR TCA 90 bp | AGAAAATATTCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTAACCCGGTCTACAAAGTaGGTTCCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RKYSQNLPFPSRKHQDTVTRSTK*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTTTGTAGACCGGGT...TACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGAATATTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | ACAACATTTATTTCATTGGGGCTGGATGACAGGTTCAGAGATTCAGTCCTTTATATCTCTCTGTGGCCCTaGCTGTCCCAAACTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TTFISLGLDDRFRDSVLYISLWP*LSQTPS Trigger: AGAGGGAGTTTGGGACAGCCAGGGCCACAGAGAGAT...ATAAAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTAACTGTGGGAAGGCAGATAAAAGCCTaGATCTGTCACATAAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SQNLPFPSRKHQDTVTVGRQIKA*ICHIKW Trigger: CCACTTTATGTGACAGATTCAGGCTTTTATCTGCCT...TCCCACAGTTACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR TCA 90 bp | ATTACTACAAAACCCCAGCAGAATAAATCCCAAATGAGGGACTGCTTAAGGATAGAGAGCCATAAAAACTaGGTGTCTACAGCACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ITTKPQQNKSQMRDCLRIESHKN*VSTAQR Trigger: CCTCTGTGCTGTAGACACTCAGTTTTTATGGCTCTC...TATCCTTAAGCAGTCCCTCATTTGGGATTTATTCTGCTGGGGTTTTGTAGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTAACTGTGGGAACCAAAAGAGAGGCATaGCCAACAAACACTAAGATT | + |
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Preference number: 2 (lower is better) Translates to: SQNLPFPSRKHQDTVTVGTKREA*PTNTKI Trigger: AATCTTAGTGTTTGTTGGCCATGCCTCTCTTTTGGT...TCCCACAGTTACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | AGCCAAATGTCCAAGGAAGAAAACAGTTCAAACAGGATGAAGGGAACAGAAGAACCTGAGATGATAAAATaGCAGAGAGGGGTTACTAGG | + |
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Preference number: 2 (lower is better) Translates to: SQMSKEENSSNRMKGTEEPEMIK*QRGVTR Trigger: CCTAGTAACCCCTCTCTGCCATTTTATCATCTCAGG...TTCTTCTGTTCCCTTCATCCTGTTTGAACTGTTTTCTTCCTTGGACATTTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | ACACCTAATAGTGCCACTCCCAGGGCCAAGAATATGCAAACCATCACAGGTATATTTCAGAATAGGAGGTaGAAATTTTTCCTGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TPNSATPRAKNMQTITGIFQNRR*KFFLFP Trigger: AGGAAACAGGAAAAATTTCCACCTCCTATTCTGAAA...TATACCTGTGATGGTTTGCATATTCTTGGCCCTGGGAGTGGCACTATTAGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | AGCACAACATTTATTTCATTGGGGCTGGATGACAGGTTCAGAGATTCAGTCCTTACCTTAATTGTGAAGTaGGCAGTGTTTAACGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: STTFISLGLDDRFRDSVLTLIVK*AVFNVR Trigger: TCTCACGTTAAACACTGCCCACTTCACAATTAAGGT...AAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR GCA 90 bp | ACAACATTTATTTCATTGGGGCTGGATGACAGGTTCAGAGATTCAGTCCTTTATCCAGGGCCAAGAATATaGAAACCATCACAGGTATAT | + |
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Preference number: 2 (lower is better) Translates to: TTFISLGLDDRFRDSVLYPGPRI*KPSQVY Trigger: ATATACCTGTGATGGTTTGCATATTCTTGGCCCTGG...ATAAAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CCA 90 bp | AGCCAAATGTCCAAGGAAGAAAACAGTTCAAACAGGATGAAGGGAACAGAAGAAATCTGTCACATAAAGTaGCACACAGCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SQMSKEENSSNRMKGTEEICHIK*HTALIP Trigger: TGGGATTAAAGCTGTGTGCCACTTTATGTGACAGAT...TTCTTCTGTTCCCTTCATCCTGTTTGAACTGTTTTCTTCCTTGGACATTTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR CCA 72 bp | TACACAGCCATCTGCCCTTTTAGAAGCAGGAAGCTCTaGGCACCGGCAGTGAGAACGAGATACAAACGCCCA | + |
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Preference number: 3 (lower is better) Translates to: YTAICPFRSRKL*APAVRTRYKRP Trigger: TGGGCGTTTGTATCTCGTTCTCACTGCCGGTGCCCAGAGCTTCCTGCTTCTAAAAGGGCAGATGGCTGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGGGAGACAGGGTAGAGAGAGCCATAAAAACTGAGTGTCTACAGCACAGAGGCAGGCAATGTCTGTaGTGTTTGAGGACACCCGGT | + |
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Preference number: 3 (lower is better) Translates to: RKGDRVERAIKTECLQHRGRQCL*CLRTPG Trigger: ACCGGGTGTCCTCAAACACAACAGACATTGCCTGCC...TCTGTGCTGTAGACACTCAGTTTTTATGGCTCTCTCTACCCTGTCTCCCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR TCA 72 bp | GAGAAAGGGAGACAGGGTAGAGAGAGCCATAAAAACTaGGTGTCTACAGCACAGAGGCAGGTCTGCCTAATA | + |
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Preference number: 3 (lower is better) Translates to: EKGRQGRESHKN*VSTAQRQVCLI Trigger: TATTAGGCAGACCTGCCTCTGTGCTGTAGACACTCAGTTTTTATGGCTCTCTCTACCCTGTCTCCCTTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR TCA 72 bp | CCGGCAGTGAGAACGAGATACAAACGCCCATTACCTTaGCTGATCACCATCAACACTGTACACATATACACT | + |
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Preference number: 3 (lower is better) Translates to: PAVRTRYKRPLP*LITINTVHIYT Trigger: AGTGTATATGTGTACAGTGTTGATGGTGATCAGTCAAGGTAATGGGCGTTTGTATCTCGTTCTCACTGCCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR TCA 72 bp | TCTTATAAGCACAACATTTATTTCATTGGGGCTGGATaGCAGGTTCAGAGATTCAGTCCTTTATCATCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SYKHNIYFIGAG*QVQRFSPLSSR Trigger: CCTTGATGATAAAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGTGCTTATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | GAGAAGCCCCACGGTCCTCATGGCCAAGGGAGGCAGCAGGACCCTGCCTGTAGCAGTCTCACTGACTTCTaGCACTGGACCCAGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: EKPHGPHGQGRQQDPACSSLTDF*HWTQGH Trigger: GTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACT...GCTACAGGCAGGGTCCTGCTGCCTCCCTTGGCCATGAGGACCGTGGGGCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | GAGAAGCCCCACGGTCCTCATGGCCAAGGGAGGCAGCAGGACCCTGCCTGTAGCCGTTCCACAGGCTTCTaGTCACCCTCCAGGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: EKPHGPHGQGRQQDPACSRSTGF*SPSRKS Trigger: GGATTTCCTGGAGGGTGACCAGAAGCCTGTGGAACG...GCTACAGGCAGGGTCCTGCTGCCTCCCTTGGCCATGAGGACCGTGGGGCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | GCTTTAATCCCAACACTCCGGAGGCAGAGGCAGGGGCAGGCAATGTCTGTTGTGTCCCGCTGCCTCTTCTaGAGGACCTCAGTTTGCACC | + |
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Preference number: 4 (lower is better) Translates to: ALIPTLRRQRQGQAMSVVSRCLF*RTSVCT Trigger: GGTGCAAACTGAGGTCCTGCAGAAGAGGCAGCGGGA...CACAACAGACATTGCCTGCCCCTGCCTCTGCCTCCGGAGTGTTGGGATTAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | GCTTTAATCCCAACACTCCGGAGGCAGAGGCAGGGGCAGGCAATGTCTGTTGTGTGCCGTGAGCCACCTTaGCTCGGAAGCTGGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: ALIPTLRRQRQGQAMSVVCREPP*LGSWRH Trigger: ATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCA...CACAACAGACATTGCCTGCCCCTGCCTCTGCCTCCGGAGTGTTGGGATTAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | GAGAAGCCCCACGGTCCTCATGGCCAAGGGAGGCAGCAGGACCCTGCCTGTAGCTGCAGGACCTCAGTTTaGACCTTCTTTCCATATTTC | + |
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Preference number: 4 (lower is better) Translates to: EKPHGPHGQGRQQDPACSCRTSV*TFFPYF Trigger: GAAATATGGAAAGAAGGTGCAAACTGAGGTCCTGCA...GCTACAGGCAGGGTCCTGCTGCCTCCCTTGGCCATGAGGACCGTGGGGCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | GCTTTAATCCCAACACTCCGGAGGCAGAGGCAGGGGCAGGCAATGTCTGTTGTGCTCCTGCCTTTGCACTaGGTTCCACAGGCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ALIPTLRRQRQGQAMSVVLLPLH*VPQASG Trigger: ACCAGAAGCCTGTGGAACGCAGTGCAAAGGCAGGAG...CACAACAGACATTGCCTGCCCCTGCCTCTGCCTCCGGAGTGTTGGGATTAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR CAA 72 bp | CACTCCGGAGGCAGAGGCAGGGGCAGGCAATGTCTGTaGTGTTTGAGGACACCCGGTCTACAAAGTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: HSGGRGRGRQCL*CLRTPGLQSEF Trigger: GAACTCACTTTGTAGACCGGGTGTCCTCAAACACAACAGACATTGCCTGCCCCTGCCTCTGCCTCCGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR CAA 72 bp | AAGACTGGCTCCCATCTGGTTAGGAGGAGGGTCTCATaGCCCACCCCCAGTGACACACTTCCTCCAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: KTGSHLVRRRVS*PTPSDTLPPTR Trigger: CCTTGTTGGAGGAAGTGTGTCACTGGGGGTGGGCAATGAGACCCTCCTCCTAACCAGATGGGAGCCAGTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | GCTTTAATCCCAACACTCCGGAGGCAGAGGCAGGGGCAGGCAATGTCTGTTGTGCTGGTTCTGAGGTGTTaGCTGAGTCTCACTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: ALIPTLRRQRQGQAMSVVLVLRC*LSLTDF Trigger: GAAGTCAGTGAGACTCAGCCAACACCTCAGAACCAG...CACAACAGACATTGCCTGCCCCTGCCTCTGCCTCCGGAGTGTTGGGATTAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR TCA 90 bp | ACACCTAATAGTGCCACTCCCAGGGCCAAGAATATGCAAACCATCACAGGTATACTGCAACTCTTGATCTaGGGCCAGGCACGCATCCGA | + |
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Preference number: 4 (lower is better) Translates to: TPNSATPRAKNMQTITGILQLLI*GQARIR Trigger: TCGGATGCGTGCCTGGCCTCAGATCAAGAGTTGCAG...TATACCTGTGATGGTTTGCATATTCTTGGCCCTGGGAGTGGCACTATTAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR TCA 90 bp | AGCCAAATGTCCAAGGAAGAAAACAGTTCAAACAGGATGAAGGGAACAGAAGAACTGGAGCCCTTGCCGTaGGCCACCTTGGCTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SQMSKEENSSNRMKGTEELEPLP*ATLARK Trigger: CTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAG...TTCTTCTGTTCCCTTCATCCTGTTTGAACTGTTTTCTTCCTTGGACATTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGAGACAGGGTAGAGAGAGCCATAAAAACTGAGTGTCTACAGCACAGACACGACATTGAGACCTaGCTTCAGGAGTCCGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: RKGDRVERAIKTECLQHRHDIET*LQESAG Trigger: TCCCGCGGACTCCTGAAGCCAGGTCTCAATGTCGTG...TCTGTGCTGTAGACACTCAGTTTTTATGGCTCTCTCTACCCTGTCTCCCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | AGCACAACATTTATTTCATTGGGGCTGGATGACAGGTTCAGAGATTCAGTCCTTTCTTCCCAGGCCTCCTaGAGCCCTTGCCGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: STTFISLGLDDRFRDSVLSSQAS*SPCREP Trigger: TGGCTCACGGCAAGGGCTCCAGGAGGCCTGGGAAGA...AAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR TCA 90 bp | ACACCTAATAGTGCCACTCCCAGGGCCAAGAATATGCAAACCATCACAGGTATATTGGCTGAGTCTCACTaGCTTCTGGCACTGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: TPNSATPRAKNMQTITGILAESH*LLALDP Trigger: TGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAA...TATACCTGTGATGGTTTGCATATTCTTGGCCCTGGGAGTGGCACTATTAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | ACCTTAATTGTGAAGTGGGCAGTGTTTAACGTGAGAAAGGGAGACAGGGTAGAGTGTGCTTTCTCCCGCTaGCTCTTCTGCAGGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLIVKWAVFNVRKGDRVECAFSR*LFCRTS Trigger: TGAGGTCCTGCAGAAGAGGCAGCGGGAGAAAGCACA...CTCTACCCTGTCTCCCTTTCTCACGTTAAACACTGCCCACTTCACAATTAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | TACCAGCCCAGAAAGCAGAGCACCATACATAGGCTTCCACTGTCAGAAAAGCTTTCCGGGTCTCTTATTTaGCCCTTTCTTCCCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: YQPRKQSTIHRLPLSEKLSGSLI*PFLPRP Trigger: AGGCCTGGGAAGAAAGGGGCAAATAAGAGACCCGGA...AAGCTTTTCTGACAGTGGAAGCCTATGTATGGTGCTCTGCTTTCTGGGCTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | ACACCTAATAGTGCCACTCCCAGGGCCAAGAATATGCAAACCATCACAGGTATAACTGACTTCTGGCACTaGACCCAGGGTCACATCGAG | + |
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Preference number: 4 (lower is better) Translates to: TPNSATPRAKNMQTITGITDFWH*TQGHIE Trigger: CTCGATGTGACCCTGGGTCCAGTGCCAGAAGTCAGT...TATACCTGTGATGGTTTGCATATTCTTGGCCCTGGGAGTGGCACTATTAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | CTGATCACCATCAACACTGTACACATATACACTATAGCCATTAACACTAAAGTGGCCTCCTGGAGCCCTTaGCGTGAGCCACCTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LITINTVHIYTIAINTKVASWSP*REPPWL Trigger: GAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGC...CACTTTAGTGTTAATGGCTATAGTGTATATGTGTACAGTGTTGATGGTGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR CCA 90 bp | TCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTAACTGTGGGACCTTGGCTCGGAAGCTaGAGACATCGTCGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SQNLPFPSRKHQDTVTVGPWLGS*RHRRSS Trigger: AGAGCTACGACGATGTCTCCAGCTTCCGAGCCAAGG...TCCCACAGTTACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR TCA 90 bp | TCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTAACTGTGGGATCTCTAGCACGACATTaGGACCTGGCTTCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SQNLPFPSRKHQDTVTVGSLARH*DLASGV Trigger: GACTCCTGAAGCCAGGTCTCAATGTCGTGCTAGAGA...TCCCACAGTTACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGAGACAGGGTAGAGAGAGCCATAAAAACTGAGTGTCTACAGCACAGAGCGGCCTGTTTAGTCTaGAGCTTCTGTCGAATCTTT | + |
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Preference number: 4 (lower is better) Translates to: RKGDRVERAIKTECLQHRAACLV*SFCRIF Trigger: AAAGATTCGACAGAAGCTGCAGACTAAACAGGCCGC...TCTGTGCTGTAGACACTCAGTTTTTATGGCTCTCTCTACCCTGTCTCCCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | AGCACAACATTTATTTCATTGGGGCTGGATGACAGGTTCAGAGATTCAGTCCTTGGCATTCATCATGTGTaGTTTCTCCCGCTGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: STTFISLGLDDRFRDSVLGIHHV*FLPLPL Trigger: AAGAGGCAGCGGGAGAAAGCACACATGATGAATGCC...AAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | ATTACTACAAAACCCCAGCAGAATAAATCCCAAATGAGGGACTGCTTAAGGATACTGGCCTTTACCTCCTaGCTTTGCACTGCGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ITTKPQQNKSQMRDCLRILAFTS*LCTAFH Trigger: GTGGAACGCAGTGCAAAGGCAGGAGGTAAAGGCCAG...TATCCTTAAGCAGTCCCTCATTTGGGATTTATTCTGCTGGGGTTTTGTAGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| 3UTR CAA 72 bp | ACCGGCAGTGAGAACGAGATACAAACGCCCATTACCTaGACTGATCACCATCAACACTGTACACATATACAC | + |
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Preference number: 4 (lower is better) Translates to: TGSENEIQTPIT*TDHHQHCTHIH Trigger: GTGTATATGTGTACAGTGTTGATGGTGATCAGTCAAGGTAATGGGCGTTTGTATCTCGTTCTCACTGCCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS-3UTR GCA 90 bp | AGCCAAATGTCCAAGGAAGAAAACAGTTCAAACAGGATGAAGGGAACAGAAGAAAGACTTGGCCATTTCTaGAAAATAATCGGTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQMSKEENSSNRMKGTEERLGHF*KIIGGP Trigger: AGGCCCACCGATTATTTTGCAGAAATGGCCAAGTCT...TTCTTCTGTTCCCTTCATCCTGTTTGAACTGTTTTCTTCCTTGGACATTTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CCA 90 bp | ACACCTAATAGTGCCACTCCCAGGGCCAAGAATATGCAAACCATCACAGGTATATCTGCTGATCAGACTTaGCCATTTCTGCAAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPNSATPRAKNMQTITGISADQT*PFLQNN Trigger: ATTATTTTGCAGAAATGGCCAAGTCTGATCAGCAGA...TATACCTGTGATGGTTTGCATATTCTTGGCCCTGGGAGTGGCACTATTAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR TCA 90 bp | AGCACAACATTTATTTCATTGGGGCTGGATGACAGGTTCAGAGATTCAGTCCTTCTTTCTGGTATTTCTTaGTGGCATTCATCATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STTFISLGLDDRFRDSVLLSGIS*WHSSCV Trigger: CACACATGATGAATGCCATCAAGAAATACCAGAAAG...AAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAATATTCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTACCTTTACTCATCTGCTaGCCTTTACCTCCTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKYSQNLPFPSRKHQDTVPLLIC*PLPPAF Trigger: AAAGGCAGGAGGTAAAGGCCAGCAGATGAGTAAAGG...TACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGAATATTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAATATTCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTACTGGAAGTCGTCTTCTaGATTAACGCCTTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKYSQNLPFPSRKHQDTVLEVVF*INAFLL Trigger: CAGAAGAAAGGCGTTAATCCAGAAGACGACTTCCAG...TACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGAATATTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CCA 90 bp | ATTACTACAAAACCCCAGCAGAATAAATCCCAAATGAGGGACTGCTTAAGGATACTTTCGTGTTCCATTTaGAGCCTTTCTTCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITTKPQQNKSQMRDCLRILSCSI*SLSSFH Trigger: GTGGAAAGAAGAAAGGCTCCAAATGGAACACGAAAG...TATCCTTAAGCAGTCCCTCATTTGGGATTTATTCTGCTGGGGTTTTGTAGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CCA 90 bp | CTGATCACCATCAACACTGTACACATATACACTATAGCCATTAACACTAAAGTGTCAGAGAAGCCTTTCTaGTATTTCTTGATGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LITINTVHIYTIAINTKVSEKPF*YFLMAF Trigger: GAATGCCATCAAGAAATACCAGAAAGGCTTCTCTGA...CACTTTAGTGTTAATGGCTATAGTGTATATGTGTACAGTGTTGATGGTGATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS GCA 90 bp | CGGGTCTCTTATTTGCCCCTTTCTTCCCAGGCCTCCTGGAGCCCTTaGCGTGAGCCACCTTGGCTCGGAAGCTGGAGACATCGTCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVSYLPLSSQASWSP*REPPWLGSWRHRRS Trigger: GCTACGACGATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGCCTGGGAAGAAAGGGGCAAATAAGAGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CCA 90 bp | CCCCTTTCTTCCCAGGCCTCCTGGAGCCCTTGCCGTGAGCCACCTTaGCTCGGAAGCTGGAGACATCGTCGTAGCTCTCTTTCGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSQASWSPCREPP*LGSWRHRRSSLSCS Trigger: GGAACACGAAAGAGAGCTACGACGATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGCCTGGGAAGAAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS TCA 90 bp | AGACCTGGCTTCAGGAGTCCGCGGGAAAACGCATCCTGCAACTCTTaGTCTGAGGCCAGGCACGCATCCGACTCCGAGTCCGACTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPGFRSPRENASCNS*SEARHASDSESDSE Trigger: TTCAGAGTCGGACTCGGAGTCGGATGCGTGCCTGGCCTCAGATCAAGAGTTGCAGGATGCGTTTTCCCGCGGACTCCTGAAGCCAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CCA 90 bp | CAGGCCTCCTGGAGCCCTTGCCGTGAGCCACCTTGGCTCGGAAGCTaGAGACATCGTCGTAGCTCTCTTTCGTGTTCCATTTGGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QASWSPCREPPWLGS*RHRRSSLSCSIWSL Trigger: AAGGCTCCAAATGGAACACGAAAGAGAGCTACGACGATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CCA 90 bp | CTCGTTTTCCGGGTCTCTTATTTGCCCCTTTCTTCCCAGGCCTCCTaGAGCCCTTGCCGTGAGCCACCTTGGCTCGGAAGCTGGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LVFRVSYLPLSSQAS*SPCREPPWLGSWRH Trigger: ATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGCCTGGGAAGAAAGGGGCAAATAAGAGACCCGGAAAACGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CCA 90 bp | GTCCTGGTTCTGAGGTGTTGGCTGAGTCTCACTGACTTCTGGCACTaGACCCAGGGTCACATCGAGCCTTTCAACCCACTCCAGATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VLVLRCWLSLTDFWH*TQGHIEPFNPLQIP Trigger: CGGGATCTGGAGTGGGTTGAAAGGCTCGATGTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAACACCTCAGAACCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS TCA 90 bp | CGCCTTTCTTCTGGTCCTGGTTCTGAGGTGTTGGCTGAGTCTCACTaGCTTCTGGCACTGGACCCAGGGTCACATCGAGCCTTTCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: RLSSGPGSEVLAESH*LLALDPGSHRAFQP Trigger: GGGTTGAAAGGCTCGATGTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAACACCTCAGAACCAGGACCAGAAGAAAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS CCA 90 bp | CTTCTGGTCCTGGTTCTGAGGTGTTGGCTGAGTCTCACTGACTTCTaGCACTGGACCCAGGGTCACATCGAGCCTTTCAACCCACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVLVLRCWLSLTDF*HWTQGHIEPFNPLQ Trigger: CTGGAGTGGGTTGAAAGGCTCGATGTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAACACCTCAGAACCAGGACCAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS TCA 90 bp | GACCCAGGGTCACATCGAGCCTTTCAACCCACTCCAGATCCCGTCTaGATTCAGCCAAGCACTGTTTCAGGCCACTCAGAATCGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DPGSHRAFQPTPDPV*IQPSTVSGHSESVS Trigger: GGAGACCGATTCTGAGTGGCCTGAAACAGTGCTTGGCTGAATTCAGACGGGATCTGGAGTGGGTTGAAAGGCTCGATGTGACCCTGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147373.2 |
||
| CDS TCA 90 bp | CACTCACGTCATTCACTGCCTTCTTCGGCTTCTCTAGCACGACATTaGGACCTGGCTTCAGGAGTCCGCGGGAAAACGCATCCTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: HSRHSLPSSASLARH*DLASGVRGKTHPAT Trigger: AGTTGCAGGATGCGTTTTCCCGCGGACTCCTGAAGCCAGGTCTCAATGTCGTGCTAGAGAAGCCGAAGAAGGCAGTGAATGACGTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS TCA 90 bp | GACCCAGGGTCACATCGAGCCTTTCAACCCACTCCAGATCCCGTCTaGATTCAGCCAAGCACTGTTTCAGGCCACTCACGTCATTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: DPGSHRAFQPTPDPV*IQPSTVSGHSRHSL Trigger: CAGTGAATGACGTGAGTGGCCTGAAACAGTGCTTGGCTGAATTCAGACGGGATCTGGAGTGGGTTGAAAGGCTCGATGTGACCCTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CCA 90 bp | GTCTTCTGGATTAACGCCTTTCTTCTGGTCCTGGTTCTGAGGTGTTaGCTGAGTCTCACTGACTTCTGGCACTGGACCCAGGGTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: VFWINAFLLVLVLRC*LSLTDFWHWTQGHI Trigger: GATGTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAACACCTCAGAACCAGGACCAGAAGAAAGGCGTTAATCCAGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTAATCCCAACACTCCGGAGGCAGAGGCAGGGGCAGGCAATGTCTGTTGTGCCTAAGCGCTCGAAGTaGCTTGGCCTTTTCAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: ALIPTLRRQRQGQAMSVVPKRSK*LGLFRF Trigger: AAATCTGAAAAGGCCAAGCAACTTCGAGCGCTTAGG...CACAACAGACATTGCCTGCCCCTGCCTCTGCCTCCGGAGTGTTGGGATTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGAGACAGGGTAGAGAGAGCCATAAAAACTGAGTGTCTACAGCACAGACTTTACCTCCTGCCTTaGCACTGCGTTCCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RKGDRVERAIKTECLQHRLYLLP*HCVPQA Trigger: AGCCTGTGGAACGCAGTGCAAAGGCAGGAGGTAAAG...TCTGTGCTGTAGACACTCAGTTTTTATGGCTCTCTCTACCCTGTCTCCCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CAA 90 bp | TACCAGCCCAGAAAGCAGAGCACCATACATAGGCTTCCACTGTCAGAAAAGCTTTTCTCTAGCACGACATaGAGACCTGGCTTCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YQPRKQSTIHRLPLSEKLFSSTT*RPGFRS Trigger: ACTCCTGAAGCCAGGTCTCAATGTCGTGCTAGAGAA...AAGCTTTTCTGACAGTGGAAGCCTATGTATGGTGCTCTGCTTTCTGGGCTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS GCA 90 bp | CTTCTGTCGAATCTTTTGCATCTGCTGATCAGACTTGGCCATTTCTaGAAAATAATCGGTGGGCCTCTTCGTAGGGACTTGGAGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLSNLLHLLIRLGHF*KIIGGPLRRDLELM Trigger: CATCAGCTCCAAGTCCCTACGAAGAGGCCCACCGATTATTTTGCAGAAATGGCCAAGTCTGATCAGCAGATGCAAAAGATTCGACAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS GCA 90 bp | ACCTCAGTTTGCACCTTCTTTCCATATTTCCTAAGCGCTCGAAGTTaGTTGGCCTTTTCAGATTTCTCCATGGCGGCCTGTTTAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSVCTFFPYFLSARS*LAFSDFSMAACLVC Trigger: GCAGACTAAACAGGCCGCCATGGAGAAATCTGAAAAGGCCAAGCAACTTCGAGCGCTTAGGAAATATGGAAAGAAGGTGCAAACTGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS GCA 90 bp | TTCTTGATGGCATTCATCATGTGTGCTTTCTCCCGCTGCCTCTTCTaGAGGACCTCAGTTTGCACCTTCTTTCCATATTTCCTAAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLMAFIMCAFSRCLF*RTSVCTFFPYFLSA Trigger: AGCGCTTAGGAAATATGGAAAGAAGGTGCAAACTGAGGTCCTGCAGAAGAGGCAGCGGGAGAAAGCACACATGATGAATGCCATCAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS GCA 90 bp | ATCAGAGAAGCCTTTCTGGTATTTCTTGATGGCATTCATCATGTGTaGTTTCTCCCGCTGCCTCTTCTGCAGGACCTCAGTTTGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: IREAFLVFLDGIHHV*FLPLPLLQDLSLHL Trigger: AAGGTGCAAACTGAGGTCCTGCAGAAGAGGCAGCGGGAGAAAGCACACATGATGAATGCCATCAAGAAATACCAGAAAGGCTTCTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS-3UTR CAA 90 bp | ATTACTACAAAACCCCAGCAGAATAAATCCCAAATGAGGGACTGCTTAAGGATACCTCTTCGTAGGGACTaGGAGCTGATGGAGTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITTKPQQNKSQMRDCLRIPLRRD*ELMESG Trigger: CCCCGACTCCATCAGCTCCAAGTCCCTACGAAGAGG...TATCCTTAAGCAGTCCCTCATTTGGGATTTATTCTGCTGGGGTTTTGTAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CAA 90 bp | TCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTAACTGTGGGAAGCGCTCGAAGTTGCTaGGCCTTTTCAGATTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQNLPFPSRKHQDTVTVGSARSC*AFSDFS Trigger: GGAGAAATCTGAAAAGGCCAAGCAACTTCGAGCGCT...TCCCACAGTTACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS GCA 90 bp | TTCTGGTATTTCTTGATGGCATTCATCATGTGTGCTTTCTCCCGCTaGCTCTTCTGCAGGACCTCAGTTTGCACCTTCTTTCCATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FWYFLMAFIMCAFSR*LFCRTSVCTFFPYF Trigger: GAAATATGGAAAGAAGGTGCAAACTGAGGTCCTGCAGAAGAGGCAGCGGGAGAAAGCACACATGATGAATGCCATCAAGAAATACCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS TCA 90 bp | GTGTTCCATTTGGAGCCTTTCTTCTTTCCACCAAAACCAAACTTCTaGTTTTTGTATCTTCGTTTGGCATTAGGCCCTTTACTCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VFHLEPFFFPPKPNF*FLYLRLALGPLLIC Trigger: GCAGATGAGTAAAGGGCCTAATGCCAAACGAAGATACAAAAATCAGAAGTTTGGTTTTGGTGGAAAGAAGAAAGGCTCCAAATGGAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAATATTCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTATCTTCAGTTTCTGTCTaGCTCGTTTTCCGGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKYSQNLPFPSRKHQDTVSSVSV*LVFRVS Trigger: AGAGACCCGGAAAACGAGCAAGACAGAAACTGAAGA...TACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGAATATTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CAA 90 bp | ACAACATTTATTTCATTGGGGCTGGATGACAGGTTCAGAGATTCAGTCCTTTATTCTTTCGTGTTCCATTaGGAGCCTTTCTTCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTFISLGLDDRFRDSVLYSFVFH*EPFFFP Trigger: TGGAAAGAAGAAAGGCTCCAAATGGAACACGAAAGA...ATAAAGGACTGAATCTCTGAACCTGTCATCCAGCCCCAATGAAATAAATGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAATATTCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTACTTCTGTCGAATCTTTaGCATCTGCTGATCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: RKYSQNLPFPSRKHQDTVLLSNL*HLLIRL Trigger: AAGTCTGATCAGCAGATGCAAAAGATTCGACAGAAG...TACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGAATATTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAATATTCTCAAAACTTACCATTCCCATCCAGGAAACATCAGGACACTGTACCTTTCTGGTATTTCTaGATGGCATTCATCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RKYSQNLPFPSRKHQDTVPFWYF*MAFIMC Trigger: ACACATGATGAATGCCATCAAGAAATACCAGAAAGG...TACAGTGTCCTGATGTTTCCTGGATGGGAATGGTAAGTTTTGAGAATATTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS TCA 72 bp | GCCCCTTTCTTCCCAGGCCTCCTGGAGCCCTTGCCGTaGGCCACCTTGGCTCGGAAGCTGGAGACATCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: APFFPGLLEPLP*ATLARKLETSS Trigger: CGACGATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGCCTGGGAAGAAAGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CCA 72 bp | CGGGTCTCTTATTTGCCCCTTTCTTCCCAGGCCTCCTaGAGCCCTTGCCGTGAGCCACCTTGGCTCGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVSYLPLSSQAS*SPCREPPWLGS Trigger: GCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGCCTGGGAAGAAAGGGGCAAATAAGAGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS TCA 72 bp | GAGTCCGCGGGAAAACGCATCCTGCAACTCTTGATCTaGGGCCAGGCACGCATCCGACTCCGAGTCCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: ESAGKRILQLLI*GQARIRLRVRL Trigger: GAGTCGGACTCGGAGTCGGATGCGTGCCTGGCCTCAGATCAAGAGTTGCAGGATGCGTTTTCCCGCGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS TCA 72 bp | TTCAGGAGTCCGCGGGAAAACGCATCCTGCAACTCTTaGTCTGAGGCCAGGCACGCATCCGACTCCGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FRSPRENASCNS*SEARHASDSES Trigger: GGACTCGGAGTCGGATGCGTGCCTGGCCTCAGATCAAGAGTTGCAGGATGCGTTTTCCCGCGGACTCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS GCA 72 bp | TATTTGCCCCTTTCTTCCCAGGCCTCCTGGAGCCCTTaGCGTGAGCCACCTTGGCTCGGAAGCTGGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: YLPLSSQASWSP*REPPWLGSWRH Trigger: ATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCAGGAGGCCTGGGAAGAAAGGGGCAAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS TCA 72 bp | TCTGGTCCTGGTTCTGAGGTGTTGGCTGAGTCTCACTaGCTTCTGGCACTGGACCCAGGGTCACATCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGPGSEVLAESH*LLALDPGSHRA Trigger: GGCTCGATGTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAACACCTCAGAACCAGGACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS CCA 72 bp | CTGAGGTGTTGGCTGAGTCTCACTGACTTCTGGCACTaGACCCAGGGTCACATCGAGCCTTTCAACCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LRCWLSLTDFWH*TQGHIEPFNPL Trigger: GAGTGGGTTGAAAGGCTCGATGTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAACACCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS CCA 72 bp | TGGAGCCCTTGCCGTGAGCCACCTTGGCTCGGAAGCTaGAGACATCGTCGTAGCTCTCTTTCGTGTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: WSPCREPPWLGS*RHRRSSLSCSI Trigger: AATGGAACACGAAAGAGAGCTACGACGATGTCTCCAGCTTCCGAGCCAAGGTGGCTCACGGCAAGGGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CAA 90 bp | CCACTCACGTCATTCACTGCCTTCTTCGGCTTCTCTAGCACGACATaGAGACCTGGCTTCAGGAGTCCGCGGGAAAACGCATCCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PLTSFTAFFGFSSTT*RPGFRSPRENASCN Trigger: GTTGCAGGATGCGTTTTCCCGCGGACTCCTGAAGCCAGGTCTCAATGTCGTGCTAGAGAAGCCGAAGAAGGCAGTGAATGACGTGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CCA 72 bp | CTGGTTCTGAGGTGTTGGCTGAGTCTCACTGACTTCTaGCACTGGACCCAGGGTCACATCGAGCCTTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LVLRCWLSLTDF*HWTQGHIEPFN Trigger: GTTGAAAGGCTCGATGTGACCCTGGGTCCAGTGCCAGAAGTCAGTGAGACTCAGCCAACACCTCAGAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
||
| CDS TCA 72 bp | CATTCACTGCCTTCTTCGGCTTCTCTAGCACGACATTaGGACCTGGCTTCAGGAGTCCGCGGGAAAACGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HSLPSSASLARH*DLASGVRGKTH Trigger: ATGCGTTTTCCCGCGGACTCCTGAAGCCAGGTCTCAATGTCGTGCTAGAGAAGCCGAAGAAGGCAGTGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS GCA 72 bp | ATTAGGCCCTTTACTCATCTGCTGGCCTTTACCTCCTaGCTTTGCACTGCGTTCCACAGGCTTCTGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: IRPFTHLLAFTS*LCTAFHRLLVT Trigger: GGTGACCAGAAGCCTGTGGAACGCAGTGCAAAGGCAGGAGGTAAAGGCCAGCAGATGAGTAAAGGGCCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
||
| CDS CAA 72 bp | TCATTCACTGCCTTCTTCGGCTTCTCTAGCACGACATaGAGACCTGGCTTCAGGAGTCCGCGGGAAAACGCA | + |
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Preference number: 6 (lower is better) Translates to: SFTAFFGFSSTT*RPGFRSPRENA Trigger: TGCGTTTTCCCGCGGACTCCTGAAGCCAGGTCTCAATGTCGTGCTAGAGAAGCCGAAGAAGGCAGTGAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS TCA 72 bp | TCACATCGAGCCTTTCAACCCACTCCAGATCCCGTCTaGATTCAGCCAAGCACTGTTTCAGGCCACTCACGT | + |
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Preference number: 6 (lower is better) Translates to: SHRAFQPTPDPV*IQPSTVSGHSR Trigger: ACGTGAGTGGCCTGAAACAGTGCTTGGCTGAATTCAGACGGGATCTGGAGTGGGTTGAAAGGCTCGATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS TCA 72 bp | TCACATCGAGCCTTTCAACCCACTCCAGATCCCGTCTaGATTCAGCCAAGCACTGTTTCAGGCCACTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SHRAFQPTPDPV*IQPSTVSGHSE Trigger: TTCTGAGTGGCCTGAAACAGTGCTTGGCTGAATTCAGACGGGATCTGGAGTGGGTTGAAAGGCTCGATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147373.2 |
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| CDS GCA 72 bp | TTGTATCTTCGTTTGGCATTAGGCCCTTTACTCATCTaGTGGCCTTTACCTCCTGCCTTTGCACTGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LYLRLALGPLLI*WPLPPAFALRS Trigger: GGAACGCAGTGCAAAGGCAGGAGGTAAAGGCCAGCAGATGAGTAAAGGGCCTAATGCCAAACGAAGATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS CCA 72 bp | TATCTTCGTTTGGCATTAGGCCCTTTACTCATCTGCTaGCCTTTACCTCCTGCCTTTGCACTGCGTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: YLRLALGPLLIC*PLPPAFALRST Trigger: TGTGGAACGCAGTGCAAAGGCAGGAGGTAAAGGCCAGCAGATGAGTAAAGGGCCTAATGCCAAACGAAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030501.15 |
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| CDS GCA 72 bp | TGCACCTTCTTTCCATATTTCCTAAGCGCTCGAAGTTaGTTGGCCTTTTCAGATTTCTCCATGGCGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: CTFFPYFLSARS*LAFSDFSMAAC Trigger: ACAGGCCGCCATGGAGAAATCTGAAAAGGCCAAGCAACTTCGAGCGCTTAGGAAATATGGAAAGAAGGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
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| CDS GCA 72 bp | TTCTTGATGGCATTCATCATGTGTGCTTTCTCCCGCTaGCTCTTCTGCAGGACCTCAGTTTGCACCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLMAFIMCAFSR*LFCRTSVCTFF Trigger: AAAGAAGGTGCAAACTGAGGTCCTGCAGAAGAGGCAGCGGGAGAAAGCACACATGATGAATGCCATCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
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| CDS CAA 72 bp | TTGCACCTTCTTTCCATATTTCCTAAGCGCTCGAAGTaGCTTGGCCTTTTCAGATTTCTCCATGGCGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LHLLSIFPKRSK*LGLFRFLHGGL Trigger: CAGGCCGCCATGGAGAAATCTGAAAAGGCCAAGCAACTTCGAGCGCTTAGGAAATATGGAAAGAAGGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
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| CDS CAA 90 bp | TCAGTTTGCACCTTCTTTCCATATTTCCTAAGCGCTCGAAGTTGCTaGGCCTTTTCAGATTTCTCCATGGCGGCCTGTTTAGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SVCTFFPYFLSARSC*AFSDFSMAACLVCS Trigger: GCTGCAGACTAAACAGGCCGCCATGGAGAAATCTGAAAAGGCCAAGCAACTTCGAGCGCTTAGGAAATATGGAAAGAAGGTGCAAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
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| CDS CAA 90 bp | GACCTCAGTTTGCACCTTCTTTCCATATTTCCTAAGCGCTCGAAGTaGCTTGGCCTTTTCAGATTTCTCCATGGCGGCCTGTTTAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DLSLHLLSIFPKRSK*LGLFRFLHGGLFSL Trigger: CAGACTAAACAGGCCGCCATGGAGAAATCTGAAAAGGCCAAGCAACTTCGAGCGCTTAGGAAATATGGAAAGAAGGTGCAAACTGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
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| CDS CCA 72 bp | GCTTCTGTCGAATCTTTTGCATCTGCTGATCAGACTTaGCCATTTCTGCAAAATAATCGGTGGGCCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: ASVESFASADQT*PFLQNNRWASS Trigger: CGAAGAGGCCCACCGATTATTTTGCAGAAATGGCCAAGTCTGATCAGCAGATGCAAAAGATTCGACAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
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| CDS CAA 72 bp | ACCTTCTTTCCATATTTCCTAAGCGCTCGAAGTTGCTaGGCCTTTTCAGATTTCTCCATGGCGGCCTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: TFFPYFLSARSC*AFSDFSMAACL Trigger: TAAACAGGCCGCCATGGAGAAATCTGAAAAGGCCAAGCAACTTCGAGCGCTTAGGAAATATGGAAAGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030501.15 ENSMUST00000147373.2 |
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