Pregenerated sensors for EBF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010476Ensembl transcript IDs: ENSMUST00000033378.13, ENSMUST00000106118.10, ENSMUST00000168203.2, ENSMUST00000169486.9, ENSMUST00000209578.2, ENSMUST00000210774.2
Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGAGCTTAGAGGACCGAGAGCAGCAGACAGACCCAGGAAGAAGTaGCTGGCGGACTGGAGGTTTGTGCTTTTGGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GELRGPRAADRPRKK*LADWRFVLLVCVCV Trigger: CACACACACACACACCAAAAGCACAAACCTCCAGTCCGCCAGTCACTTCTTCCTGGGTCTGTCTGCTGCTCTCGGTCCTCTAAGCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR TCA 90 bp | CACGCTGTCTGCAAGGGCGATGAGTGGGAAGGAAGGACAGAGTCCTaGAGTCCTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: HAVCKGDEWEGRTES*SPDSWSDGGFGTKR Trigger: CCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAGGACTTCAGGACTCTGTCCTTCCTTCCCACTCATCGCCCTTGCAGACAGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR CCA 90 bp | AGCTTAGAGGACCGAGAGCAGCAGACAGACCCAGGAAGAAGTGACTaGCGGACTGGAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SLEDREQQTDPGRSD*RTGGLCFWCVCVCV Trigger: CACACACACACACACACACCAAAAGCACAAACCTCCAGTCCGCCAGTCACTTCTTCCTGGGTCTGTCTGCTGCTCTCGGTCCTCTAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR GCA 90 bp | CAGCAGACAGACCCAGGAAGAAGTGACTGGCGGACTGGAGGTTTGTaGTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: QQTDPGRSDWRTGGL*FWCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTCCAGTCCGCCAGTCACTTCTTCCTGGGTCTGTCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR CCA 90 bp | AGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTaGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAA | + |
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Preference number: 1 (lower is better) Translates to: RTSVYLNKTDPTDRS*YLPFPCATTLGRDQ Trigger: TTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYPEVRP*MLGAAK Trigger: CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGG...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGATCTGCCCTTCCCCTGTaGGACAACACTGGGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LTLGLTVGLALRGRVSEGSALPL*DNTGQG Trigger: TCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGA...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACTTGTTCATGAAGGAGTaGGCTTGTTCGCGGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYLFMKE*ACSRLD Trigger: ATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAA...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAATTGGATGCTGGGTGCTaGGAAGGCAAACAGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PSPVRQHWAGIKHQNRRELDAGC*EGKQSP Trigger: GGGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAA...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAACCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PSPVRQHWAGIKHQNRREPEVRP*MLGAAK Trigger: CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGG...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAACTACACGTGTCCCCTaGAGTCCGTCCTTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: PSPVRQHWAGIKHQNRRETTRVP*SPSLDA Trigger: AGCATCCAAGGACGGACTTCAGGGGACACGTGTAGT...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR TCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAACTACACGTGTCCCCTaGAGTCCGTCCTTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: VSALPLCDNTGQGSNTKTTTRVP*SPSLDA Trigger: AGCATCCAAGGACGGACTTCAGGGGACACGTGTAGT...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACACACCAAAACAGACGTaGAAAAAGAAGGCAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYTPKQT*KKKAGK Trigger: TTTCCCTGCCTTCTTTTTTCACGTCTGTTTTGGTGT...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGATCCTTGGATGCTGGGTaGTGCGAAGGCAAACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LTLGLTVGLALRGRVSEGSLDAG*CEGKQS Trigger: GCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGA...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAAAGTCCGTCCTTGGATaGTGGGTGCTGCGAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: PSPVRQHWAGIKHQNRREKSVLG*WVLRRQ Trigger: TTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTT...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR CAA 90 bp | GAGCAGCAGACAGACCCAGGAAGAAGTGACTGGCGGACTGGAGGTTaGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: EQQTDPGRSDWRTGG*CFWCVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTCCAGTCCGCCAGTCACTTCTTCCTGGGTCTGTCTGCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCTTGTTCATGAAGGAGTaGGCTTGTTCGCGGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PPSLPATPNSPSHILVCSLFMKE*ACSRLD Trigger: ATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAA...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCTTTCTTCCTCACTGTTaGATGGGCATCAAAACGGTG | + |
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Preference number: 2 (lower is better) Translates to: PPSLPATPNSPSHILVCSFLPHC*MGIKTV Trigger: CACCGTTTTGATGCCCATGCAACAGTGAGGAAGAAA...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR GCA 90 bp | AAACGTACTAACCAGCAGTGTCCCCGATACCTCTCCAACTCCAAGGGGAGCTTAACAGGTCTTGGTATCTaGCCTTCCCCTGTGCGACAA | + |
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Preference number: 2 (lower is better) Translates to: KRTNQQCPRYLSNSKGSLTGLGI*PSPVRQ Trigger: TTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGT...TAAGCTCCCCTTGGAGTTGGAGAGGTATCGGGGACACTGCTGGTTAGTACGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCTTCCTCACTGTTGCATaGGCATCAAAACGGTGCATA | + |
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Preference number: 2 (lower is better) Translates to: PPSLPATPNSPSHILVCSFLTVA*ASKRCI Trigger: TATGCACCGTTTTGATGCCCATGCAACAGTGAGGAA...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR CCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGATGGCTCATACCTCCTTaGCCCCCTTTTATTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: LTLGLTVGLALRGRVSEGWLIPP*PPFIHH Trigger: GTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCA...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR GCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAAAGTCCGTCCTTGGATaGTGGGTGCTGCGAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQKSVLG*WVLRRQ Trigger: TTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTT...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR GCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTTTTCTTCCTCACTGTTaGATGGGCATCAAAACGGTG | + |
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Preference number: 2 (lower is better) Translates to: GRCGPFTAASHAQNLPEFFLPHC*MGIKTV Trigger: CACCGTTTTGATGCCCATGCAACAGTGAGGAAGAAA...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTTTCCTCACTGTTGCATaGGCATCAAAACGGTGCATA | + |
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Preference number: 2 (lower is better) Translates to: GRCGPFTAASHAQNLPEFFLTVA*ASKRCI Trigger: TATGCACCGTTTTGATGCCCATGCAACAGTGAGGAA...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTACAGGAAGCTCTAGGTaGGAGAATATTGGAACCAAC | + |
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Preference number: 2 (lower is better) Translates to: GRCGPFTAASHAQNLPEFTGSSR*ENIGTN Trigger: GTTGGTTCCAATATTCTCCCACCTAGAGCTTCCTGT...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGAGGAGGTTTGTGCTTTTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LTLGLTVGLALRGRVSEGGGLCF*CVCVCV Trigger: CACACACACACACACACACCAAAAGCACAAACCTCC...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGTTTTCTCTGTCAGTGTaGTTGTTGAAGGCAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SNRQVLVSALPLCDNTGQFSLSV*LLKARD Trigger: ATCTCTTGCCTTCAACAAGCACACTGACAGAGAAAA...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTCCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: VNKVELFMKEWACSRLDSPEVRP*MLGAAK Trigger: CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGG...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| 3UTR-3UTR CCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACATTCCTCACTGTTGCATaGGCATCAAAACGGTGCATA | + |
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Preference number: 2 (lower is better) Translates to: VSALPLCDNTGQGSNTKTFLTVA*ASKRCI Trigger: TATGCACCGTTTTGATGCCCATGCAACAGTGAGGAA...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACAACTACACGTGTCCCCTaGAGTCCGTCCTTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTTTRVP*SPSLDA Trigger: AGCATCCAAGGACGGACTTCAGGGGACACGTGTAGT...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR TCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGATGTCAGTGTGCTTGTTaGAGGCAAGAGATTCGATAT | + |
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Preference number: 2 (lower is better) Translates to: LTLGLTVGLALRGRVSEGCQCAC*RQEIRY Trigger: ATATCGAATCTCTTGCCTTCAACAAGCACACTGACA...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR TCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACATGTCAGTGTGCTTGTTaGAGGCAAGAGATTCGATAT | + |
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Preference number: 2 (lower is better) Translates to: VSALPLCDNTGQGSNTKTCQCAC*RQEIRY Trigger: ATATCGAATCTCTTGCCTTCAACAAGCACACTGACA...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGTTGGATGCTGGGTGCTaGGAAGGCAAACAGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: VYSARKLKNVADRTCFNRLDAGC*EGKQSP Trigger: GGGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAA...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGCAATAGGTTTACAGTaGGCGAAAGTTGAAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: SNRQVLVSALPLCDNTGQAIGLQ*AKVEKC Trigger: ACATTTTTCAACTTTCGCGCACTGTAAACCTATTGC...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| 3UTR CAA 90 bp | GGCCCACTGACCCTTGGGGACATTCCGTTTCTCTTACTGAGTCCCTaGAATGAACGCTTTCTAAGCTCTATGTTGTCTCTTTGTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: GPLTLGDIPFLLLSP*NERFLSSMLSLCEG Trigger: ACCTTCACAAAGAGACAACATAGAGCTTAGAAAGCGTTCATTCAAGGGACTCAGTAAGAGAAACGGAATGTCCCCAAGGGTCAGTGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| 3UTR-3UTR TCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGACTACACGTGTCCCCTaGAGTCCGTCCTTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: VYSARKLKNVADRTCFNRTTRVP*SPSLDA Trigger: AGCATCCAAGGACGGACTTCAGGGGACACGTGTAGT...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGACTACACGTGTCCCCTaGAGTCCGTCCTTGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKTTRVP*SPSLDA Trigger: AGCATCCAAGGACGGACTTCAGGGGACACGTGTAGT...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGTCCTTGGATGCTGGGTaGTGCGAAGGCAAACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKSLDAG*CEGKQS Trigger: GCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGA...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCATACAAAATAGGCGGTaGTTTGTTTCCTTAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: PPSLPATPNSPSHILVCSIQNRR*FVSLIF Trigger: GAAGATTAAGGAAACAAAGCACCGCCTATTTTGTAT...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGATACAAAATAGGCGGTaGTTTGTTTCCTTAATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SNRQVLVSALPLCDNTGQIQNRR*FVSLIF Trigger: GAAGATTAAGGAAACAAAGCACCGCCTATTTTGTAT...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACAACAGGTCTTGGTATCTaGCCTTCCCCTGTGCGACAA | + |
|
Preference number: 2 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTTGLGI*PSPVRQ Trigger: TTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGT...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR GCA 90 bp | AAACGTACTAACCAGCAGTGTCCCCGATACCTCTCCAACTCCAAGGGGAGCTTATTTTCTCTGTCAGTGTaGTTGTTGAAGGCAAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KRTNQQCPRYLSNSKGSLFSLSV*LLKARD Trigger: ATCTCTTGCCTTCAACAAGCACACTGACAGAGAAAA...TAAGCTCCCCTTGGAGTTGGAGAGGTATCGGGGACACTGCTGGTTAGTACGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAGGAAGCTCTAGGTaGGAGAATATTGGAACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: EVCAFGVCVCVCVCVCVCTGSSR*ENIGTN Trigger: GTTGGTTCCAATATTCTCCCACCTAGAGCTTCCTGT...ACACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGTTGGATGCTGGGTGCTaGGAAGGCAAACAGAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RNFIQNRRCFVSLIFRTELDAGC*EGKQSP Trigger: GGGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAA...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGAAGTCCGTCCTTGGATaGTGGGTGCTGCGAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWKSVLG*WVLRRQ Trigger: TTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAGTCCGTCCTTGGATaGTGGGTGCTGCGAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEKSVLG*WVLRRQ Trigger: TTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTT...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTAAGTCCGTCCTTGGATaGTGGGTGCTGCGAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCKSVLG*WVLRRQ Trigger: TTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTT...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGTTTCTTCCTCACTGTTaGATGGGCATCAAAACGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VYSARKLKNVADRTCFNRFLPHC*MGIKTV Trigger: CACCGTTTTGATGCCCATGCAACAGTGAGGAAGAAA...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGTGTCAGTGTGCTTGTTaGAGGCAAGAGATTCGATAT | + |
|
Preference number: 2 (lower is better) Translates to: VYSARKLKNVADRTCFNRCQCAC*RQEIRY Trigger: ATATCGAATCTCTTGCCTTCAACAAGCACACTGACA...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR GCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAATACAAAATAGGCGGTaGTTTGTTTCCTTAATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQIQNRR*FVSLIF Trigger: GAAGATTAAGGAAACAAAGCACCGCCTATTTTGTAT...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGACACCAAAACAGACGTaGAAAAAGAAGGCAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWTPKQT*KKKAGK Trigger: TTTCCCTGCCTTCTTTTTTCACGTCTGTTTTGGTGT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGGCAATAGGTTTACAGTaGGCGAAAGTTGAAAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKAIGLQ*AKVEKC Trigger: ACATTTTTCAACTTTCGCGCACTGTAAACCTATTGC...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGATACAAAATAGGCGGTaGTTTGTTTCCTTAATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VYSARKLKNVADRTCFNRIQNRR*FVSLIF Trigger: GAAGATTAAGGAAACAAAGCACCGCCTATTTTGTAT...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGAAAGGAAGTGTCGCATaGAAGAAGAGCATTTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWKGSVA*KKSILS Trigger: GGATAAAATGCTCTTCTTCCATGCGACACTTCCTTT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR TCA 72 bp | TGCAAGGGCGATGAGTGGGAAGGAAGGACAGAGTCCTaGAGTCCTGACTCTTGGTCTGACGGTGGGTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CKGDEWEGRTES*SPDSWSDGGFG Trigger: GCCAAACCCACCGTCAGACCAAGAGTCAGGACTTCAGGACTCTGTCCTTCCTTCCCACTCATCGCCCTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| 3UTR GCA 72 bp | GTGACTTCTGCTGCTGTTCGCAAAGCACACGCTGTCTaGAAGGGCGATGAGTGGGAAGGAAGGACAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTSAAVRKAHAV*KGDEWEGRTES Trigger: GGACTCTGTCCTTCCTTCCCACTCATCGCCCTTGCAGACAGCGTGTGCTTTGCGAACAGCAGCAGAAGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACTACAGTGCGCGAAAGTaGAAAAATGTTGCTGATCGC | + |
|
Preference number: 3 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYYSARK*KNVADR Trigger: GCGATCAGCAACATTTTTCAACTTTCGCGCACTGTA...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR TCA 72 bp | AGAGGACCGAGAGCAGCAGACAGACCCAGGAAGAAGTaGCTGGCGGACTGGAGGTTTGTGCTTTTGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGPRAADRPRKK*LADWRFVLLVC Trigger: ACACACCAAAAGCACAAACCTCCAGTCCGCCAGTCACTTCTTCCTGGGTCTGTCTGCTGCTCTCGGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| 3UTR CCA 72 bp | GACCGAGAGCAGCAGACAGACCCAGGAAGAAGTGACTaGCGGACTGGAGGTTTGTGCTTTTGGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: DREQQTDPGRSD*RTGGLCFWCVC Trigger: ACACACACACCAAAAGCACAAACCTCCAGTCCGCCAGTCACTTCTTCCTGGGTCTGTCTGCTGCTCTCGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACGTCAATAAAGTGGAATaGTTCATGAAGGAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYVNKVE*FMKEWA Trigger: AGCCCACTCCTTCATGAACAATTCCACTTTATTGAC...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCATGGCTCATACCTCCTaGGCCCCCTTTTATTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: PPSLPATPNSPSHILVCSMAHTS*APFYSP Trigger: TGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCAT...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR CCA 72 bp | AGCAGCCACAAAGCCAGAGTGTGGCCCACTGACCCTTaGGGACATTCCGTTTCTCTTACTGAGTCCCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSHKARVWPTDP*GHSVSLTESLE Trigger: TTCAAGGGACTCAGTAAGAGAAACGGAATGTCCCCAAGGGTCAGTGGGCCACACTCTGGCTTTGTGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| 3UTR GCA 72 bp | TCAACAAAACAGATCCAACAGACAGGTCTTGGTATCTaGCCTTCCCCTGTGCGACAACACTGGGCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: STKQIQQTGLGI*PSPVRQHWAGI Trigger: GATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGATCTGTTTTGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGCTGTCAGTGTGCTTGTaGAAGGCAAGAGATTCGATA | + |
|
Preference number: 3 (lower is better) Translates to: SNRQVLVSALPLCDNTGQLSVCL*KARDSI Trigger: TATCGAATCTCTTGCCTTCAACAAGCACACTGACAG...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCGTCAATAAAGTGGAATaGTTCATGAAGGAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPSLPATPNSPSHILVCSVNKVE*FMKEWA Trigger: AGCCCACTCCTTCATGAACAATTCCACTTTATTGAC...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTCTGTCAGTGTGCTTGTaGAAGGCAAGAGATTCGATA | + |
|
Preference number: 3 (lower is better) Translates to: GRCGPFTAASHAQNLPEFLSVCL*KARDSI Trigger: TATCGAATCTCTTGCCTTCAACAAGCACACTGACAG...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR CCA 72 bp | GGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTaGGCAGGGATCAAACACCAAAACAGACGTGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLGICPSPVRQH*AGIKHQNRREK Trigger: TTTTTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACATACAGTGCGCGAAAGTaGAAAAATGTTGCTGATCGC | + |
|
Preference number: 3 (lower is better) Translates to: VSALPLCDNTGQGSNTKTYSARK*KNVADR Trigger: GCGATCAGCAACATTTTTCAACTTTCGCGCACTGTA...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR CCA 72 bp | GTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTaGTATCTGCCCTTCCCCTGTGCGACAACACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VYLNKTDPTDRS*YLPFPCATTLG Trigger: GCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGTCAATAAAGTGGAATaGTTCATGAAGGAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQVNKVE*FMKEWA Trigger: AGCCCACTCCTTCATGAACAATTCCACTTTATTGAC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGATGGCTCATACCTCCTaGGCCCCCTTTTATTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: VYSARKLKNVADRTCFNRMAHTS*APFYSP Trigger: TGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCAT...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACACTGTCAGTGTGCTTGTaGAAGGCAAGAGATTCGATA | + |
|
Preference number: 3 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTLSVCL*KARDSI Trigger: TATCGAATCTCTTGCCTTCAACAAGCACACTGACAG...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGCTAGGTGGGAGAATATaGGAACCAACAGACAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VYSARKLKNVADRTCFNRLGGRI*EPTDSS Trigger: GCTACTGTCTGTTGGTTCCAATATTCTCCCACCTAG...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGATGGCTCATACCTCCTaGGCCCCCTTTTATTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWMAHTS*APFYSP Trigger: TGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCAT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGTACAGTGCGCGAAAGTaGAAAAATGTTGCTGATCGC | + |
|
Preference number: 3 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKYSARK*KNVADR Trigger: GCGATCAGCAACATTTTTCAACTTTCGCGCACTGTA...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGTCAATAAAGTGGAATaGTTCATGAAGGAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VYSARKLKNVADRTCFNRVNKVE*FMKEWA Trigger: AGCCCACTCCTTCATGAACAATTCCACTTTATTGAC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR TCA 72 bp | ATGAGAAGAGTTCAGTCAATAAAGTGGAATTGTTCATaGAGGAGTGGGCTTGTTCGCGGCTTGATTCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: MRRVQSIKWNCS*RSGLVRGLILN Trigger: GTTAAGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGACTGAACTCTTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| 3UTR TCA 72 bp | ACATGCACAGAACCTACCAGAATTTGTCTCGGCCGCTaGCACCGTTTTCTTTTGACTATACAACAAACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TCTEPTRICLGR*HRFLLTIQQTF Trigger: AAAAGTTTGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGTTCTGTGCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTGTCAATAAAGTGGAATaGTTCATGAAGGAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCVNKVE*FMKEWA Trigger: AGCCCACTCCTTCATGAACAATTCCACTTTATTGAC...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRSPTPL*AAVLAS Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGGAGGAGGCGAGGCTTaGGGCCGGACCACGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRGGGEA*GRTTGA Trigger: TGCGCCCGTGGTCCGGCCCCAAGCCTCGCCTCCTCC...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQSPTPL*AAVLAS Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKSPTPL*AAVLAS Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGAGGAGGCGAGGCTTaGGGCCGGACCACGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQGGGEA*GRTTGA Trigger: TGCGCCCGTGGTCCGGCCCCAAGCCTCGCCTCCTCC...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCTCCCGTTGGCGCTGGTaGAGGAAGGAGGAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPSRWRW*RKEEAR Trigger: CCTCGCCTCCTCCTTCCTGCACCAGCGCCAACGGGA...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCGGTGACCGAAGAGGCTaGCATGGTGGGGCTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPGDRRG*HGGAGR Trigger: CCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACC...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGTCTGGGCGGCCGTGTTaGCGTCCACCACGCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKSGRPC*RPPRLP Trigger: CGGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGA...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCTCTGGGCGGCCGTGTTaGCGTCCACCACGCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSSGRPC*RPPRLP Trigger: CGGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGA...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRAGEYC*GRSLAG Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGTCCCGTTGGCGCTGGTaGAGGAAGGAGGAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRSRWRW*RKEEAR Trigger: CCTCGCCTCCTCCTTCCTGCACCAGCGCCAACGGGA...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSAGEYC*GRSLAG Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAGGAGGAGGCGAGGCTTaGGGCCGGACCACGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRREGGGEA*GRTTGA Trigger: TGCGCCCGTGGTCCGGCCCCAAGCCTCGCCTCCTCC...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCCTGCCATGGTGGGGCTaGACGGCACTATGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPLPWWG*TALCRR Trigger: CCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAG...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPSTGCT*SRGSAA Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR GCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCTCCCGTTGGCGCTGGTaGAGGAAGGAGGAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSSRWRW*RKEEAR Trigger: CCTCGCCTCCTCCTTCCTGCACCAGCGCCAACGGGA...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAATCTGGGCGGCCGTGTTaGCGTCCACCACGCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRRESGRPC*RPPRLP Trigger: CGGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGA...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACATCTGGGCGGCCGTGTTaGCGTCCACCACGCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTSGRPC*RPPRLP Trigger: CGGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGA...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCATGCCAGTGTGTGCTaGGGTGTTGCCCAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRHASVC*GVAQGG Trigger: CCCACCCTGGGCAACACCCCAGCACACACTGGCATG...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR GCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPLAGTR*LYCDCS Trigger: GCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAG...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR GCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQTAGEY*WGRSLA Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCGGGTGTTGCCCAGGGTaGGGATCTGGTTGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPGCCPG*GSGCDC Trigger: GCAATCACAACCAGATCCCCACCCTGGGCAACACCC...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGAAGAGGCTGCCATGGTaGGGCTGGACGGCACTATGC | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRKRLPW*GWTALC Trigger: GCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTT...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR TCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKSTGCT*SRGSAA Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR TCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACTGTGCTGCTACAGTTTaGAGGGAGGGTGACCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYCAATV*REGDRR Trigger: TCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCACA...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR GCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGGTGACCGAAGAGGCTaGCATGGTGGGGCTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTGDRRG*HGGAGR Trigger: CCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACC...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGTGCACTCGGATGGCGTaGGGGGTTATCAGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRCTRMA*GVISSL Trigger: GAGTGAGCTGATAACCCCCCACGCCATCCGAGTGCA...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGGGTGTTGCCCAGGGTaGGGATCTGGTTGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRGCCPG*GSGCDC Trigger: GCAATCACAACCAGATCCCCACCCTGGGCAACACCC...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCCCCTAGATTGGCCATaGCGCCACTTCCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYPLDWP*RHFHIH Trigger: ATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGG...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAGGGACCCCTAGATTaGCCATGGCGCCACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRQGPLD*PWRHFH Trigger: ATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTG...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTCTGCCATGGTGGGGCTaGACGGCACTATGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRCGPFTAASHAQNLPEFLPWWG*TALCRR Trigger: CCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAG...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCATGTCCCGAGGGTTaGCCGCATTCTTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKACPEG*PHSSGS Trigger: ACTGCCTGAAGAATGCGGGCAACCCTCGGGACATGC...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGCATGTCCCGAGGGTTaGCCGCATTCTTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQACPEG*PHSSGS Trigger: ACTGCCTGAAGAATGCGGGCAACCCTCGGGACATGC...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | AAACGTACTAACCAGCAGTGTCCCCGATACCTCTCCAACTCCAAGGGGAGCTTATCCCGTTGGCGCTGGTaGAGGAAGGAGGAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTNQQCPRYLSNSKGSLSRWRW*RKEEAR Trigger: CCTCGCCTCCTCCTTCCTGCACCAGCGCCAACGGGA...TAAGCTCCCCTTGGAGTTGGAGAGGTATCGGGGACACTGCTGGTTAGTACGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYPASRV*NCCAQT Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGTGCACTCGGATGGCGTaGGGGGTTATCAGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKCTRMA*GVISSL Trigger: GAGTGAGCTGATAACCCCCCACGCCATCCGAGTGCA...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCCCCCTAGATTGGCCATaGCGCCACTTCCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPPLDWP*RHFHIH Trigger: ATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGG...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACACTGCCATGGTGGGGCTaGACGGCACTATGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTLPWWG*TALCRR Trigger: CCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAG...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACGGCCTGTTTGGTCATTaGATCTATGAGGCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYGLFGH*IYEADI Trigger: TATGTCCGCCTCATAGATTCAATGACCAAACAGGCC...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRRESTGCT*SRGSAA Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGCGTGGCCGTCCACGTTaGCTGTTGTCGATACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKRGRPR*LLSIQR Trigger: TCGTTGTATCGACAACAGTCAACGTGGACGGCCACG...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACCACGCCTGCCGTGTaGATCCACGAGCGCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVCAFGVCVCVCVCVCVCTTPAV*IHERTG Trigger: CCCGGTGCGCTCGTGGATGCACACGGCAGGCGTGGT...ACACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCGGACATACAGATCTTaGTCTGTTCTGACGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYRTYRS*SVLTPL Trigger: CAATGGCGTCAGAACAGAGCAAGATCTGTATGTCCG...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPPASRV*NCCAQT Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCAGCCGACTTGGTCATTaGCTTGTGAGGTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPSRLGH*LVRSLT Trigger: TGTCAGAGACCTCACAAGCCAATGACCAAGTCGGCT...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQAGEYC*GRSLAG Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAAAGAGGCTGCCATGGTaGGGCTGGACGGCACTATGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRREKRLPW*GWTALC Trigger: GCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTT...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCGATCTTGCTCTGTTCTaGCGCCATTGCTGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPDLALF*RHCCTV Trigger: TACTGTACAGCAATGGCGTCAGAACAGAGCAAGATC...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTCGTGGCCGTCCACGTTaGCTGTTGTCGATACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: GRCGPFTAASHAQNLPEFRGRPR*LLSIQR Trigger: TCGTTGTATCGACAACAGTCAACGTGGACGGCCACG...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCTGTGCTGCTACAGTTTaGAGGGAGGGTGACCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSCAATV*REGDRR Trigger: TCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCACA...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGTTTCACTGCGGAGATaGCATTGGCAGGTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRVSLRR*HWQVRM Trigger: CATTCTCACCTGCCAATGTCATCTCCGCAGTGAAAC...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGACTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLTVGLALRGRVSEGLAGTR*LYCDCS Trigger: GCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAG...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACAGTGAATGCCGTTGTTaGTTTTCTCGTTGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYSECRC*FSRCSA Trigger: AGCCGAACAACGAGAAAACCAACAACGGCATTCACT...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCTCAGTAACACTTCCTTaGGTAACCTTTCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPSVTLP*VTFRGH Trigger: GTGACCCCGAAAGGTTACCCAAGGAAGTGTTACTGA...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAGGGTGTTGCCCAGGGTaGGGATCTGGTTGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRREGCCPG*GSGCDC Trigger: GCAATCACAACCAGATCCCCACCCTGGGCAACACCC...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGCCCCTAGATTGGCCATaGCGCCACTTCCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQPLDWP*RHFHIH Trigger: ATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGG...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACACAGGGACCCCTAGATTaGCCATGGCGCCACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTQGPLD*PWRHFH Trigger: ATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTG...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGGGAGGAGGCGAGGCTTaGGGCCGGACCACGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKGGGEA*GRTTGA Trigger: TGCGCCCGTGGTCCGGCCCCAAGCCTCGCCTCCTCC...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGACGTGGCCGTCCACGTTaGCTGTTGTCGATACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLTVGLALRGRVSEGRGRPR*LLSIQR Trigger: TCGTTGTATCGACAACAGTCAACGTGGACGGCCACG...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGATCTCCTGGTTATTGTaGGGCATCCCATACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THYTCPLKSVLGCWVLRRISWLL*GIPYKA Trigger: AGCCTTGTATGGGATGCCTCACAATAACCAGGAGAT...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGTTTCACTGCGGAGATaGCATTGGCAGGTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQVSLRR*HWQVRM Trigger: CATTCTCACCTGCCAATGTCATCTCCGCAGTGAAAC...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVCAFGVCVCVCVCVCVCTAGEY*WGRSLA Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...ACACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAAATGCCGTGTGTGCTaGTACAGTTTGAAGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKKCRVC*YSLKGG Trigger: CCCTCCCTTCAAACTGTAGCAGCACACACGGCATTT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCGCTCTTCTGTTTCACTaGGGAGATGACATTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSALLFH*GDDIGR Trigger: CCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGC...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCTCTTCTGTTTCACTaGGGAGATGACATTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKALLFH*GDDIGR Trigger: CCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGC...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSPASRV*NCCAQT Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQPASRV*NCCAQT Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGTCACCTGGATGTCTaGGTATCACTTTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKGHLDV*VSLSAT Trigger: GGTTGCAGAAAGTGATACCCAGACATCCAGGTGACC...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAACATGCCAGTGTGTGCTaGGGTGTTGCCCAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQHASVC*GVAQGG Trigger: CCCACCCTGGGCAACACCCCAGCACACACTGGCATG...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGAGCCGACTTGGTCATTaGCTTGTGAGGTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQSRLGH*LVRSLT Trigger: TGTCAGAGACCTCACAAGCCAATGACCAAGTCGGCT...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAGCCGACTTGGTCATTaGCTTGTGAGGTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKSRLGH*LVRSLT Trigger: TGTCAGAGACCTCACAAGCCAATGACCAAGTCGGCT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSAGEYC*GRSLAG Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGATCTTGCTCTGTTCTaGCGCCATTGCTGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQDLALF*RHCCTV Trigger: TACTGTACAGCAATGGCGTCAGAACAGAGCAAGATC...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCATCTCCTGGTTATTGTaGGGCATCCCATACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSISWLL*GIPYKA Trigger: AGCCTTGTATGGGATGCCTCACAATAACCAGGAGAT...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAATGTGCTGCTACAGTTTaGAGGGAGGGTGACCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRRECAATV*REGDRR Trigger: TCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCACA...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGACCACGCCTGCCGTGTaGATCCACGAGCGCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKTTPAV*IHERTG Trigger: CCCGGTGCGCTCGTGGATGCACACGGCAGGCGTGGT...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGGGCGTCCACCACGCCTaGCGTGTGCATCCACGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKGVHHA*RVHPRA Trigger: CGCTCGTGGATGCACACGGCAGGCGTGGTGGACGCC...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGCGGACATACAGATCTTaGTCTGTTCTGACGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKRTYRS*SVLTPL Trigger: CAATGGCGTCAGAACAGAGCAAGATCTGTATGTCCG...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCGTGTCTCGTTTCTATTaGCACAACTCTTCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPVSRFY*HNSSCH Trigger: GTGACAAGAAGAGTTGTGGCAATAGAAACGAGACAC...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTTCCCGTTGGCGCTGGTaGAGGAAGGAGGAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSSRWRW*RKEEAR Trigger: CCTCGCCTCCTCCTTCCTGCACCAGCGCCAACGGGA...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTGGTGACCGAAGAGGCTaGCATGGTGGGGCTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSGDRRG*HGGAGR Trigger: CCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACC...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTGCTCTTCTGTTTCACTaGGGAGATGACATTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRCGPFTAASHAQNLPEFALLFH*GDDIGR Trigger: CCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGC...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWSPTPL*AAVLAS Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCTCAGTAACACTTCCTTaGGTAACCTTTCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSSVTLP*VTFRGH Trigger: GTGACCCCGAAAGGTTACCCAAGGAAGTGTTACTGA...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRAGEYC*GRSLAG Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAAAGAGGCTGCCATGGTaGGGCTGGACGGCACTATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQKRLPW*GWTALC Trigger: GCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTT...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| 3UTR CAA 72 bp | ACAGACCCAGGAAGAAGTGACTGGCGGACTGGAGGTTaGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDPGRSDWRTGG*CFWCVCVCVCV Trigger: CACACACACACACACACACACACACCAAAAGCACAAACCTCCAGTCCGCCAGTCACTTCTTCCTGGGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTGGCCTGTTTGGTCATTaGATCTATGAGGCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: GRCGPFTAASHAQNLPEFGLFGH*IYEADI Trigger: TATGTCCGCCTCATAGATTCAATGACCAAACAGGCC...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGAAAGAATCTGTCAATaGTTACAGGGTCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKERICQ*LQGLRV Trigger: CACCCTCAGACCCTGTAATCATTGACAGATTCTTTC...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AAACGTACTAACCAGCAGTGTCCCCGATACCTCTCCAACTCCAAGGGGAGCTTAGGATCTGGTTGTGATTaGGGGGAACGCTGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: KRTNQQCPRYLSNSKGSLGSGCD*GERCTT Trigger: CGTTGTACAGCGTTCCCCGCAATCACAACCAGATCC...TAAGCTCCCCTTGGAGTTGGAGAGGTATCGGGGACACTGCTGGTTAGTACGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACAACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTTAGEY*WGRSLA Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSTAGEY*WGRSLA Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGTCCCGTTGGCGCTGGTaGAGGAAGGAGGAGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKSRWRW*RKEEAR Trigger: CCTCGCCTCCTCCTTCCTGCACCAGCGCCAACGGGA...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR GCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAAAATGCCGTGTGTGCTaGTACAGTTTGAAGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTKCRVC*YSLKGG Trigger: CCCTCCCTTCAAACTGTAGCAGCACACACGGCATTT...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR GCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAGAAAATGCCGTGTGTaGTGCTACAGTTTGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKRKCRV*CYSLKG Trigger: TCCCTTCAAACTGTAGCAGCACACACGGCATTTTCT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR GCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCAGAAAATGCCGTGTGTaGTGCTACAGTTTGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSRKCRV*CYSLKG Trigger: TCCCTTCAAACTGTAGCAGCACACACGGCATTTTCT...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTESPTPL*AAVLAS Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAGTGAATGCCGTTGTTaGTTTTCTCGTTGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKSECRC*FSRCSA Trigger: AGCCGAACAACGAGAAAACCAACAACGGCATTCACT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCAGTGAATGCCGTTGTTaGTTTTCTCGTTGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSSECRC*FSRCSA Trigger: AGCCGAACAACGAGAAAACCAACAACGGCATTCACT...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGCCGTAATCTATGGTTaGCTCATTAAGGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQAVIYG*LIKGSV Trigger: TACACTGCCCTTAATGAGCCAACCATAGATTACGGC...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCCCTGCCACCCCAAATTCACCTAGTCATATCCTCGTCTGTTCCGCCGTAATCTATGGTTaGCTCATTAAGGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPATPNSPSHILVCSAVIYG*LIKGSV Trigger: TACACTGCCCTTAATGAGCCAACCATAGATTACGGC...GGAACAGACGAGGATATGACTAGGTGAATTTGGGGTGGCAGGGAGGGAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGGTCACCTGGATGTCTaGGTATCACTTTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTGHLDV*VSLSAT Trigger: GGTTGCAGAAAGTGATACCCAGACATCCAGGTGACC...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTTCAGTAACACTTCCTTaGGTAACCTTTCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRCGPFTAASHAQNLPEFSVTLP*VTFRGH Trigger: GTGACCCCGAAAGGTTACCCAAGGAAGTGTTACTGA...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | GAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGTTGCCCAGGGTaGGGATCTGGTTGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVCAFGVCVCVCVCVCVCGCCPG*GSGCDC Trigger: GCAATCACAACCAGATCCCCACCCTGGGCAACACCC...ACACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACACATGCCAGTGTGTGCTaGGGTGTTGCCCAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTHASVC*GVAQGG Trigger: CCCACCCTGGGCAACACCCCAGCACACACTGGCATG...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGGAGGAGGCGAGGCTTaGGGCCGGACCACGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEGGGEA*GRTTGA Trigger: TGCGCCCGTGGTCCGGCCCCAAGCCTCGCCTCCTCC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTCTGCCATGGTGGGGCTaGACGGCACTATGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSLPWWG*TALCRR Trigger: CCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAG...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGAGATCTTGCTCTGTTCTaGCGCCATTGCTGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLTVGLALRGRVSEGDLALF*RHCCTV Trigger: TACTGTACAGCAATGGCGTCAGAACAGAGCAAGATC...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGTGGTCATTGAATCTATaGGGCGGACATACAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKWSLNL*GGHTDL Trigger: AAGATCTGTATGTCCGCCTCATAGATTCAATGACCA...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSSTGCT*SRGSAA Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAATGATTACAGGGTCTaGGGGTGTCTCGTTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKNDYRV*GCLVSI Trigger: AATAGAAACGAGACACCCTCAGACCCTGTAATCATT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGAATGATTACAGGGTCTaGGGGTGTCTCGTTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: SNRQVLVSALPLCDNTGQNDYRV*GCLVSI Trigger: AATAGAAACGAGACACCCTCAGACCCTGTAATCATT...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAATCTCCTGGTTATTGTaGGGCATCCCATACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTISWLL*GIPYKA Trigger: AGCCTTGTATGGGATGCCTCACAATAACCAGGAGAT...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGACCACGCCTGCCGTGTaGATCCACGAGCGCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWTTPAV*IHERTG Trigger: CCCGGTGCGCTCGTGGATGCACACGGCAGGCGTGGT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTGCAGCTTGTAGTGAATaGCGTTGTTGGTTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRCGPFTAASHAQNLPEFAACSE*RCWFSR Trigger: ACGAGAAAACCAACAACGGCATTCACTACAAGCTGC...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGACGGACATACAGATCTTaGTCTGTTCTGACGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLTVGLALRGRVSEGRTYRS*SVLTPL Trigger: CAATGGCGTCAGAACAGAGCAAGATCTGTATGTCCG...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAACGGACATACAGATCTTaGTCTGTTCTGACGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRRERTYRS*SVLTPL Trigger: CAATGGCGTCAGAACAGAGCAAGATCTGTATGTCCG...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACATCAGTAACACTTCCTTaGGTAACCTTTCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTSVTLP*VTFRGH Trigger: GTGACCCCGAAAGGTTACCCAAGGAAGTGTTACTGA...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGCATGCCAGTGTGTGCTaGGGTGTTGCCCAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKHASVC*GVAQGG Trigger: CCCACCCTGGGCAACACCCCAGCACACACTGGCATG...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACAAAGAGGCTGCCATGGTaGGGCTGGACGGCACTATGC | + |
|
Preference number: 4 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTKRLPW*GWTALC Trigger: GCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTT...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKSTGCT*SRGSAA Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTAATGATTACAGGGTCTaGGGGTGTCTCGTTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: GRCGPFTAASHAQNLPEFNDYRV*GCLVSI Trigger: AATAGAAACGAGACACCCTCAGACCCTGTAATCATT...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAGAAAGAATCTGTCAATaGTTACAGGGTCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRREERICQ*LQGLRV Trigger: CACCCTCAGACCCTGTAATCATTGACAGATTCTTTC...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTGCATGTCCCGAGGGTTaGCCGCATTCTTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSACPEG*PHSSGS Trigger: ACTGCCTGAAGAATGCGGGCAACCCTCGGGACATGC...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGGATCTGGTTGTGATTaGGGGGAACGCTGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQGSGCD*GERCTT Trigger: CGTTGTACAGCGTTCCCCGCAATCACAACCAGATCC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTTCTGGGCGGCCGTGTTaGCGTCCACCACGCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCSGRPC*RPPRLP Trigger: CGGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGA...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAAAGTGAATGCCGTTGTTaGTTTTCTCGTTGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRRESECRC*FSRCSA Trigger: AGCCGAACAACGAGAAAACCAACAACGGCATTCACT...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAATCCGGATTCTTGTCCTaGCCTTCATACACGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQSGFLS*PSYTMA Trigger: GGCCATCGTGTATGAAGGCCAGGACAAGAATCCGGA...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTTGCACTCGGATGGCGTaGGGGGTTATCAGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSCTRMA*GVISSL Trigger: GAGTGAGCTGATAACCCCCCACGCCATCCGAGTGCA...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| 3UTR CAA 72 bp | TCACGGCCGCTTCACATGCACAGAACCTACCAGAATTaGTCTCGGCCGCTGACACCGTTTTCTTTTGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: SRPLHMHRTYQN*SRPLTPFSFDY Trigger: ATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAATGGTCATTGAATCTATaGGGCGGACATACAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSPVRQHWAGIKHQNRREWSLNL*GGHTDL Trigger: AAGATCTGTATGTCCGCCTCATAGATTCAATGACCA...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGTTTCACTGCGGAGATaGCATTGGCAGGTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQVSLRR*HWQVRM Trigger: CATTCTCACCTGCCAATGTCATCTCCGCAGTGAAAC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTACCACGCCTGCCGTGTaGATCCACGAGCGCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCTTPAV*IHERTG Trigger: CCCGGTGCGCTCGTGGATGCACACGGCAGGCGTGGT...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AAACGTACTAACCAGCAGTGTCCCCGATACCTCTCCAACTCCAAGGGGAGCTTAGCAGCTTGTAGTGAATaGCGTTGTTGGTTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRTNQQCPRYLSNSKGSLAACSE*RCWFSR Trigger: ACGAGAAAACCAACAACGGCATTCACTACAAGCTGC...TAAGCTCCCCTTGGAGTTGGAGAGGTATCGGGGACACTGCTGGTTAGTACGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGTGTCTCGTTTCTATTaGCACAACTCTTCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSALPLCDNTGQGSNTKTVSRFY*HNSSCH Trigger: GTGACAAGAAGAGTTGTGGCAATAGAAACGAGACAC...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGCATGTCCCGAGGGTTaGCCGCATTCTTCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRACPEG*PHSSGS Trigger: ACTGCCTGAAGAATGCGGGCAACCCTCGGGACATGC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRLAGTR*LYCDCS Trigger: GCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAG...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGGTGACCGAAGAGGCTaGCATGGTGGGGCTGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEGDRRG*HGGAGR Trigger: CCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATGCCGTGTGTGCTaGTACAGTTTGAAGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVCAFGVCVCVCVCVCVCKCRVC*YSLKGG Trigger: CCCTCCCTTCAAACTGTAGCAGCACACACGGCATTT...ACACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGGTCACCTGGATGTCTaGGTATCACTTTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQGHLDV*VSLSAT Trigger: GGTTGCAGAAAGTGATACCCAGACATCCAGGTGACC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAAGCCGACTTGGTCATTaGCTTGTGAGGTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQSRLGH*LVRSLT Trigger: TGTCAGAGACCTCACAAGCCAATGACCAAGTCGGCT...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCAGEYC*GRSLAG Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGCAGGGACCCCTAGATTaGCCATGGCGCCACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRQGPLD*PWRHFH Trigger: ATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTG...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGATCTTGCTCTGTTCTaGCGCCATTGCTGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQDLALF*RHCCTV Trigger: TACTGTACAGCAATGGCGTCAGAACAGAGCAAGATC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACATGTGCTGCTACAGTTTaGAGGGAGGGTGACCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTCAATV*REGDRR Trigger: TCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCACA...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTGGATCTGGTTGTGATTaGGGGGAACGCTGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSGSGCD*GERCTT Trigger: CGTTGTACAGCGTTCCCCGCAATCACAACCAGATCC...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTETAGEY*WGRSLA Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACATCCGGATTCTTGTCCTaGCCTTCATACACGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTSGFLS*PSYTMA Trigger: GGCCATCGTGTATGAAGGCCAGGACAAGAATCCGGA...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGCAGCTTGTAGTGAATaGCGTTGTTGGTTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQAACSE*RCWFSR Trigger: ACGAGAAAACCAACAACGGCATTCACTACAAGCTGC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGGATCTGGTTGTGATTaGGGGGAACGCTGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRGSGCD*GERCTT Trigger: CGTTGTACAGCGTTCCCCGCAATCACAACCAGATCC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAAGAAAATGCCGTGTGTaGTGCTACAGTTTGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQRKCRV*CYSLKG Trigger: TCCCTTCAAACTGTAGCAGCACACACGGCATTTTCT...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTGCTCTTCTGTTTCACTaGGGAGATGACATTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSALLFH*GDDIGR Trigger: CCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGC...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGTCCGGATTCTTGTCCTaGCCTTCATACACGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRSGFLS*PSYTMA Trigger: GGCCATCGTGTATGAAGGCCAGGACAAGAATCCGGA...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGTGCACTCGGATGGCGTaGGGGGTTATCAGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWCTRMA*GVISSL Trigger: GAGTGAGCTGATAACCCCCCACGCCATCCGAGTGCA...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTAATCTATGGTTaGCTCATTAAGGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVCAFGVCVCVCVCVCVCAVIYG*LIKGSV Trigger: TACACTGCCCTTAATGAGCCAACCATAGATTACGGC...ACACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGCCGTAATCTATGGTTaGCTCATTAAGGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQAVIYG*LIKGSV Trigger: TACACTGCCCTTAATGAGCCAACCATAGATTACGGC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTCATGCCAGTGTGTGCTaGGGTGTTGCCCAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCHASVC*GVAQGG Trigger: CCCACCCTGGGCAACACCCCAGCACACACTGGCATG...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTAGCCGACTTGGTCATTaGCTTGTGAGGTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSSRLGH*LVRSLT Trigger: TGTCAGAGACCTCACAAGCCAATGACCAAGTCGGCT...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGCCCCTAGATTGGCCATaGCGCCACTTCCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKPLDWP*RHFHIH Trigger: ATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGG...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAATGGTCATTGAATCTATaGGGCGGACATACAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQWSLNL*GGHTDL Trigger: AAGATCTGTATGTCCGCCTCATAGATTCAATGACCA...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACAATCTCCTGGTTATTGTaGGGCATCCCATACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTISWLL*GIPYKA Trigger: AGCCTTGTATGGGATGCCTCACAATAACCAGGAGAT...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGTGTCTCGTTTCTATTaGCACAACTCTTCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQVSRFY*HNSSCH Trigger: GTGACAAGAAGAGTTGTGGCAATAGAAACGAGACAC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKPASRV*NCCAQT Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGGTCACCTGGATGTCTaGGTATCACTTTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRGHLDV*VSLSAT Trigger: GGTTGCAGAAAGTGATACCCAGACATCCAGGTGACC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTTCAGTAACACTTCCTTaGGTAACCTTTCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSSVTLP*VTFRGH Trigger: GTGACCCCGAAAGGTTACCCAAGGAAGTGTTACTGA...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGGGTGTTGCCCAGGGTaGGGATCTGGTTGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEGCCPG*GSGCDC Trigger: GCAATCACAACCAGATCCCCACCCTGGGCAACACCC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGCAGGGACCCCTAGATTaGCCATGGCGCCACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEQGPLD*PWRHFH Trigger: ATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTG...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGATCTTGCTCTGTTCTaGCGCCATTGCTGTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRDLALF*RHCCTV Trigger: TACTGTACAGCAATGGCGTCAGAACAGAGCAAGATC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGGGCCTGTTTGGTCATTaGATCTATGAGGCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKGLFGH*IYEADI Trigger: TATGTCCGCCTCATAGATTCAATGACCAAACAGGCC...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGGCCTGTTTGGTCATTaGATCTATGAGGCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRGLFGH*IYEADI Trigger: TATGTCCGCCTCATAGATTCAATGACCAAACAGGCC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTGAAAGAATCTGTCAATaGTTACAGGGTCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSERICQ*LQGLRV Trigger: CACCCTCAGACCCTGTAATCATTGACAGATTCTTTC...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGCGGACATACAGATCTTaGTCTGTTCTGACGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKRTYRS*SVLTPL Trigger: CAATGGCGTCAGAACAGAGCAAGATCTGTATGTCCG...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCLAGTR*LYCDCS Trigger: GCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAG...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTAGAAAATGCCGTGTGTaGTGCTACAGTTTGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNKVELFMKEWACSRLDSRKCRV*CYSLKG Trigger: TCCCTTCAAACTGTAGCAGCACACACGGCATTTTCT...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGAAAGAATCTGTCAATaGTTACAGGGTCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRERICQ*LQGLRV Trigger: CACCCTCAGACCCTGTAATCATTGACAGATTCTTTC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTCGTGGCCGTCCACGTTaGCTGTTGTCGATACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCRGRPR*LLSIQR Trigger: TCGTTGTATCGACAACAGTCAACGTGGACGGCCACG...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGGTTTCACTGCGGAGATaGCATTGGCAGGTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWVSLRR*HWQVRM Trigger: CATTCTCACCTGCCAATGTCATCTCCGCAGTGAAAC...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGCAGCTTGTAGTGAATaGCGTTGTTGGTTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRAACSE*RCWFSR Trigger: ACGAGAAAACCAACAACGGCATTCACTACAAGCTGC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGGATCTGGTTGTGATTaGGGGGAACGCTGTACAACG | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEGSGCD*GERCTT Trigger: CGTTGTACAGCGTTCCCCGCAATCACAACCAGATCC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGAGCCGACTTGGTCATTaGCTTGTGAGGTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWSRLGH*LVRSLT Trigger: TGTCAGAGACCTCACAAGCCAATGACCAAGTCGGCT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR TCA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGTGGTCATTGAATCTATaGGGCGGACATACAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYSARKLKNVADRTCFNRWSLNL*GGHTDL Trigger: AAGATCTGTATGTCCGCCTCATAGATTCAATGACCA...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGATCTCCTGGTTATTGTaGGGCATCCCATACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWISWLL*GIPYKA Trigger: AGCCTTGTATGGGATGCCTCACAATAACCAGGAGAT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR GCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGCCGTGTGTGCTaGTACAGTTTGAAGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEKCRVC*YSLKGG Trigger: CCCTCCCTTCAAACTGTAGCAGCACACACGGCATTT...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTTCCGGATTCTTGTCCTaGCCTTCATACACGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCSGFLS*PSYTMA Trigger: GGCCATCGTGTATGAAGGCCAGGACAAGAATCCGGA...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEPASRV*NCCAQT Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGGTCACCTGGATGTCTaGGTATCACTTTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEGHLDV*VSLSAT Trigger: GGTTGCAGAAAGTGATACCCAGACATCCAGGTGACC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTCCCCTAGATTGGCCATaGCGCCACTTCCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCPLDWP*RHFHIH Trigger: ATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGG...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTGGTCACCTGGATGTCTaGGTATCACTTTCTGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCGHLDV*VSLSAT Trigger: GGTTGCAGAAAGTGATACCCAGACATCCAGGTGACC...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTATCTCCTGGTTATTGTaGGGCATCCCATACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCISWLL*GIPYKA Trigger: AGCCTTGTATGGGATGCCTCACAATAACCAGGAGAT...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGGTGTCTCGTTTCTATTaGCACAACTCTTCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWVSRFY*HNSSCH Trigger: GTGACAAGAAGAGTTGTGGCAATAGAAACGAGACAC...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGCCGTAATCTATGGTTaGCTCATTAAGGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEAVIYG*LIKGSV Trigger: TACACTGCCCTTAATGAGCCAACCATAGATTACGGC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTTCAGTAACACTTCCTTaGGTAACCTTTCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCSVTLP*VTFRGH Trigger: GTGACCCCGAAAGGTTACCCAAGGAAGTGTTACTGA...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTGAAAGAATCTGTCAATaGTTACAGGGTCTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCERICQ*LQGLRV Trigger: CACCCTCAGACCCTGTAATCATTGACAGATTCTTTC...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTGCAGCTTGTAGTGAATaGCGTTGTTGGTTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCAACSE*RCWFSR Trigger: ACGAGAAAACCAACAACGGCATTCACTACAAGCTGC...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGTGTCTCGTTTCTATTaGCACAACTCTTCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEVSRFY*HNSSCH Trigger: GTGACAAGAAGAGTTGTGGCAATAGAAACGAGACAC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR TCA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTAATGATTACAGGGTCTaGGGGTGTCTCGTTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCNDYRV*GCLVSI Trigger: AATAGAAACGAGACACCCTCAGACCCTGTAATCATT...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCCTCTGGGCGGCCGTGTaGGCGTCCACCACGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPLWAAV*ASTTPA Trigger: GGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGCTCTGGGCGGCCGTGTaGGCGTCCACCACGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SNRQVLVSALPLCDNTGQLWAAV*ASTTPA Trigger: GGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CAA 90 bp | AAACGTACTAACCAGCAGTGTCCCCGATACCTCTCCAACTCCAAGGGGAGCTTACTCTGGGCGGCCGTGTaGGCGTCCACCACGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRTNQQCPRYLSNSKGSLLWAAV*ASTTPA Trigger: GGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...TAAGCTCCCCTTGGAGTTGGAGAGGTATCGGGGACACTGCTGGTTAGTACGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCCAGGGACCCCTAGATaGGCCATGGCGCCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRPGTPR*AMAPLP Trigger: TGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGG...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCCAGCCCAGACATAGCTaGCAGTCCGTTCCCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPQPRHS*QSVPVG Trigger: GCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTG...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYARLPC*ELLCTN Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRAGTRC*YCDCSR Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGCCAGGGACCCCTAGATaGGCCATGGCGCCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKPGTPR*AMAPLP Trigger: TGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGG...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAGCCCAGACATAGCTaGCAGTCCGTTCCCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRQPRHS*QSVPVG Trigger: GCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTG...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCACGTGGCCGTCCACGTaGACTGTTGTCGATACAACG | + |
|
Preference number: 5 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPTWPST*TVVDTT Trigger: CGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPARLPC*ELLCTN Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTCCAGGGACCCCTAGATaGGCCATGGCGCCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRCGPFTAASHAQNLPEFPGTPR*AMAPLP Trigger: TGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGG...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | CACAGCCCGGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACGCGGACATACAGATCTaGCTCTGTTCTGACGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: HSPDDVAPSRPLHMHRTYADIQI*LCSDAI Trigger: AATGGCGTCAGAACAGAGCAAGATCTGTATGTCCGC...GTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCCGGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRARLPC*ELLCTN Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCTGGGGCTGATAGCCTaGATACACGGAGTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRLGLIA*IHGVAS Trigger: AGAAGCCACTCCGTGTATCAAGGCTATCAGCCCCAG...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 |
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| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCGTCCAGGAGCGCCTTaGCAGAACTGCTTAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRRPGAP*QNCLDL Trigger: CAAGTCTAAGCAGTTCTGCAAAGGCGCTCCTGGACG...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | GGACGATGTGGCCCCTTCACGGCCGCTTCACATGCACAGAACCTACCAGAATTTGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GRCGPFTAASHAQNLPEFAGTRC*YCDCSR Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...AAATTCTGGTAGGTTCTGTGCATGTGAAGCGGCCGTGAAGGGGCCACATCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTCTCTGGGCGGCCGTGTaGGCGTCCACCACGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VNKVELFMKEWACSRLDSLWAAV*ASTTPA Trigger: GGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCAAACAGAGCCCGCGGACATACAGATCTaGCTCTGTTCTGACGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: CPLKSVLGCWVLRRQTEPADIQI*LCSDAI Trigger: AATGGCGTCAGAACAGAGCAAGATCTGTATGTCCGC...GGGCTCTGTTTGCCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKARLPC*ELLCTN Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | TCCAACAGACAGGTCTTGGTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGCTGGGGCTGATAGCCTaGATACACGGAGTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNRQVLVSALPLCDNTGQLGLIA*IHGVAS Trigger: AGAAGCCACTCCGTGTATCAAGGCTATCAGCCCCAG...CTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATACCAAGACCTGTCTGTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | CCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGACGTGAACAGCCCAGACATAGCTaGCAGTCCGTTCCCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPVRQHWAGIKHQNRREQPRHS*QSVPVG Trigger: GCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTG...TTCACGTCTGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CAA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGCTCTGGGCGGCCGTGTaGGCGTCCACCACGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKLWAAV*ASTTPA Trigger: GGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGGCGGACATACAGATCTaGCTCTGTTCTGACGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRADIQI*LCSDAI Trigger: AATGGCGTCAGAACAGAGCAAGATCTGTATGTCCGC...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGCTGGGGCTGATAGCCTaGATACACGGAGTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKLGLIA*IHGVAF Trigger: AAATGCCACTCCGTGTATCAAGGCTATCAGCCCCAG...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSALPLCDNTGQGSNTKTARLPC*ELLCTN Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
||
| CDS-3UTR CAA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGACTGGGGCTGATAGCCTaGATACACGGAGTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTLGLTVGLALRGRVSEGLGLIA*IHGVAS Trigger: AGAAGCCACTCCGTGTATCAAGGCTATCAGCCCCAG...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
||
| CDS-3UTR CAA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAACCAGGGACCCCTAGATaGGCCATGGCGCCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQPGTPR*AMAPLP Trigger: TGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGG...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | ACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGGTACACGATGGCCTGTTaGGTCATTGAATCTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: THYTCPLKSVLGCWVLRRYTMAC*VIESMR Trigger: CCTCATAGATTCAATGACCAAACAGGCCATCGTGTA...CCTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | CGTCTGTTCCAGTTAATGGCTCATACCTCCTTGGCCCCCTTTTATTCACCACAAGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RLFQLMAHTSLAPFYSPQAGTRC*YCDCSR Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...TTGTGGTGAATAAAAGGGGGCCAAGGAGGTATGAGCCATTAACTGGAACAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGTACACGATGGCCTGTTaGGTCATTGAATCTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKYTMAC*VIESMR Trigger: CCTCATAGATTCAATGACCAAACAGGCCATCGTGTA...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTACACGTGTCCCCTGAAGTCCGTCCTTGGATGCTGGGTGCTGCGAAGAGACCGTCAAAGAAGTaGTCCCCGATTATGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: NTLHVSPEVRPWMLGAAKRPSKK*SPIMIT Trigger: TGTGATCATAATCGGGGACAACTTCTTTGACGGTCT...CTTCGCAGCACCCAGCATCCAAGGACGGACTTCAGGGGACACGTGTAGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGCCAGGGACCCCTAGATaGGCCATGGCGCCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYSARKLKNVADRTCFNRPGTPR*AMAPLP Trigger: TGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGG...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
||
| CDS-3UTR CAA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACAAGACCGTCAAAGAAGTaGTCCCCGATTATGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: VSALPLCDNTGQGSNTKTRPSKK*SPIMIT Trigger: TGTGATCATAATCGGGGACAACTTCTTTGACGGTCT...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKAGTRC*YCDCSR Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: VYSARKLKNVADRTCFNRAGTRC*YCDCSR Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | CTGACTCTTGGTCTGACGGTGGGTTTGGCACTAAGAGGCAGAGTGTCTGAAGGATTGTTGGTTTTCTCGTaGTTCGGCTCTTTCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LTLGLTVGLALRGRVSEGLLVFS*FGSFSF Trigger: GAAAGAGAAAGAGCCGAACAACGAGAAAACCAACAA...TCCTTCAGACACTCTGCCTCTTAGTGCCAAACCCACCGTCAGACCAAGAGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | GTATCTGCCCTTCCCCTGTGCGACAACACTGGGCAGGGATCAAACACCAAAACATTGTTGGTTTTCTCGTaGTTCGGCTCTTTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSALPLCDNTGQGSNTKTLLVFS*FGSFSF Trigger: GAAAGAGAAAGAGCCGAACAACGAGAAAACCAACAA...TGTTTTGGTGTTTGATCCCTGCCCAGTGTTGTCGCACAGGGGAAGGGCAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTACGTGGCCGTCCACGTaGACTGTTGTCGATACAACG | + |
|
Preference number: 5 (lower is better) Translates to: VNKVELFMKEWACSRLDSTWPST*TVVDTT Trigger: CGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTCGTCCAGGAGCGCCTTaGCAGAACTGCTTAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VNKVELFMKEWACSRLDSRPGAP*QNCLDL Trigger: CAAGTCTAAGCAGTTCTGCAAAGGCGCTCCTGGACG...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGACGTGGCCGTCCACGTaGACTGTTGTCGATACAACG | + |
|
Preference number: 5 (lower is better) Translates to: VYSARKLKNVADRTCFNRTWPST*TVVDTT Trigger: CGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGAAGTGTCGCATGGAAGAAGAGCATTTTATCCCCTATAAGACCCATAAGCTGGGGCTGATAGCCTaGATACACGGAGTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERKCRMEEEHFIPYKTHKLGLIA*IHGVAS Trigger: AGAAGCCACTCCGTGTATCAAGGCTATCAGCCCCAG...CTTATGGGTCTTATAGGGGATAAAATGCTCTTCTTCCATGCGACACTTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGCAGCCCAGACATAGCTaGCAGTCCGTTCCCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWQPRHS*QSVPVG Trigger: GCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTG...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | GAGGTTTGTGCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGACCGTCAAAGAAGTaGTCCCCGATTATGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: EVCAFGVCVCVCVCVCVCRPSKK*SPIMIT Trigger: TGTGATCATAATCGGGGACAACTTCTTTGACGGTCT...ACACACACACACACACACACACACACACACACACACACCAAAAGCACAAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033378.13 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGCAGCCCAGACATAGCTaGCAGTCCGTTCCCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEQPRHS*QSVPVG Trigger: GCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTG...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | GTTTACAGTGCGCGAAAGTTGAAAAATGTTGCTGATCGCACTTGCTTTAACAGGGCGGACATACAGATCTaGCTCTGTTCTGACGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VYSARKLKNVADRTCFNRADIQI*LCSDAI Trigger: AATGGCGTCAGAACAGAGCAAGATCTGTATGTCCGC...CCTGTTAAAGCAAGTGCGATCAGCAACATTTTTCAACTTTCGCGCACTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGACGTGGCCGTCCACGTaGACTGTTGTCGATACAACG | + |
|
Preference number: 5 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWTWPST*TVVDTT Trigger: CGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGCTGGGGCTGATAGCCTaGATACACGGAGTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWLGLIA*IHGVAS Trigger: AGAAGCCACTCCGTGTATCAAGGCTATCAGCCCCAG...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGCGTCCAGGAGCGCCTTaGCAGAACTGCTTAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWRPGAP*QNCLDL Trigger: CAAGTCTAAGCAGTTCTGCAAAGGCGCTCCTGGACG...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | TTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAAATGTCAGCCCAGACATAGCTaGCAGTCCGTTCCCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIQNRRCFVSLIFRTEKCQPRHS*QSVPVG Trigger: GCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTG...ACATTTCTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACATACACGATGGCCTGTTaGGTCATTGAATCTATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTYTMAC*VIESMR Trigger: CCTCATAGATTCAATGACCAAACAGGCCATCGTGTA...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGACGTGGCCGTCCACGTaGACTGTTGTCGATACAACG | + |
|
Preference number: 5 (lower is better) Translates to: RNFIQNRRCFVSLIFRTETWPST*TVVDTT Trigger: CGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RNFIQNRRCFVSLIFRTEARLPC*ELLCTN Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACAAGACCGTCAAAGAAGTaGTCCCCGATTATGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTRPSKK*SPIMIT Trigger: TGTGATCATAATCGGGGACAACTTCTTTGACGGTCT...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGCGTCCAGGAGCGCCTTaGCAGAACTGCTTAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNFIQNRRCFVSLIFRTERPGAP*QNCLDL Trigger: CAAGTCTAAGCAGTTCTGCAAAGGCGCTCCTGGACG...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | ACCTACCAGAATTTGTCTCGGCCGCTGACACCGTTTTCTTTTGACTATACAACATTGTTGGTTTTCTCGTaGTTCGGCTCTTTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TYQNLSRPLTPFSFDYTTLLVFS*FGSFSF Trigger: GAAAGAGAAAGAGCCGAACAACGAGAAAACCAACAA...TGTTGTATAGTCAAAAGAAAACGGTGTCAGCGGCCGAGACAAATTCTGGTAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | GTCAATAAAGTGGAATTGTTCATGAAGGAGTGGGCTTGTTCGCGGCTTGATTCTTTGTTGGTTTTCTCGTaGTTCGGCTCTTTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VNKVELFMKEWACSRLDSLLVFS*FGSFSF Trigger: GAAAGAGAAAGAGCCGAACAACGAGAAAACCAACAA...AGAATCAAGCCGCGAACAAGCCCACTCCTTCATGAACAATTCCACTTTATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS-3UTR CAA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGGCGGACATACAGATCTaGCTCTGTTCTGACGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWADIQI*LCSDAI Trigger: AATGGCGTCAGAACAGAGCAAGATCTGTATGTCCGC...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AATGTAAGGACATCAGTTTATCTCAACAAAACAGATCCAACAGACAGGTCTTGGTTGTTGGTTTTCTCGTaGTTCGGCTCTTTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVRTSVYLNKTDPTDRSWLLVFS*FGSFSF Trigger: GAAAGAGAAAGAGCCGAACAACGAGAAAACCAACAA...CCAAGACCTGTCTGTTGGATCTGTTTTGTTGAGATAAACTGATGTCCTTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 |
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| CDS-3UTR CAA 90 bp | AGAAACTTTATACAAAATAGGCGGTGCTTTGTTTCCTTAATCTTCAGGACTGAGAGACCGTCAAAGAAGTaGTCCCCGATTATGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: RNFIQNRRCFVSLIFRTERPSKK*SPIMIT Trigger: TGTGATCATAATCGGGGACAACTTCTTTGACGGTCT...CTCAGTCCTGAAGATTAAGGAAACAAAGCACCGCCTATTTTGTATAAAGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS GCA 72 bp | GCTGCTGAAGGAGTTCACACCCATCATGCCAGTGTGTaGTGGGGTGTTGCCCAGGGTGGGGATCTGGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AAEGVHTHHASV*WGVAQGGDLVV Trigger: CACAACCAGATCCCCACCCTGGGCAACACCCCAGCACACACTGGCATGATGGGTGTGAACTCCTTCAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS GCA 72 bp | GAGTACTGCTGGGGACGTAGCCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGCCGACTTGGTCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: EYCWGRSLAGTR*LYCDCSRLGHW Trigger: CCAATGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGCTACGTCCCCAGCAGTACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS CAA 72 bp | TACTGCTGGGGACGTAGCCTCGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGACTTGGTCATTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: YCWGRSLAGTRC*YCDCSRLGHWL Trigger: AAGCCAATGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGCTACGTCCCCAGCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS CAA 90 bp | GCGGAGGAGCCATTAAGAAATCCAGGCGAGCCAGGGACCCCTAGATaGGCCATGGCGCCACTTCCATATCCATTCATGCTAGTGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: AEEPLRNPGEPGTPR*AMAPLPYPFMLVLT Trigger: AGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS CAA 72 bp | CCATTAAGAAATCCAGGCGAGCCAGGGACCCCTAGATaGGCCATGGCGCCACTTCCATATCCATTCATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PLRNPGEPGTPR*AMAPLPYPFML Trigger: TAGCATGAATGGATATGGAAGTGGCGCCATGGCCAATCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000209578.2 ENSMUST00000210774.2 |
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| CDS GCA 72 bp | TTGGTCATTGAATCTATGAGGCGGACATACAGATCTTaGTCTGTTCTGACGCCATTGCTGTACAGTAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVIESMRRTYRS*SVLTPLLYSSC Trigger: GCAGCTACTGTACAGCAATGGCGTCAGAACAGAGCAAGATCTGTATGTCCGCCTCATAGATTCAATGACCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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| CDS CCA 72 bp | TGTACAGTAGCTGCAGCTTGTAGTGAATGCCGTTGTTaGTTTTCTCGTTGTTCGGCTCTTTCTCTTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CTVAAACSECRC*FSRCSALSLSP Trigger: TGGAGAAAGAGAAAGAGCCGAACAACGAGAAAACCAACAACGGCATTCACTACAAGCTGCAGCTACTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033378.13 ENSMUST00000106118.10 ENSMUST00000168203.2 ENSMUST00000169486.9 ENSMUST00000210774.2 |
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