Pregenerated sensors for EBF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022053Ensembl transcript IDs: ENSMUST00000022637.14, ENSMUST00000176029.2, ENSMUST00000176161.8
Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATaGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTT | + |
Preference number: 1 (lower is better) Translates to: RDQDGGSLPSQICPT*PLGGATLPNKLRVL Trigger: AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR GCA 90 bp | CTGTCAATGCTTCATGAGGAACACGAGACCAAGATGGCGGCTCTCTaGCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTC | + |
Preference number: 1 (lower is better) Translates to: LSMLHEEHETKMAAL*LPKSVQHGRLGAQL Trigger: GAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR CCA 90 bp | AGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTaGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCTTCATA | + |
Preference number: 1 (lower is better) Translates to: RWRLSAFPNLSNMAA*GRNSPQQAQSASFI Trigger: TATGAAGGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR CCA 90 bp | TTGTGTAGTGACTGTCAATGCTTCATGAGGAACACGAGACCAAGATaGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGG | + |
Preference number: 1 (lower is better) Translates to: LCSDCQCFMRNTRPR*RLSAFPNLSNMAAW Trigger: CCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAGTCACTACACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR TCA 90 bp | CTCTCCTTAGAGGTGAGATACTTCTTGCCTGAGGATGTTCAAAGCTaGGAGGGTAACATGGGGACTCCCTGCATTGCTCAGGGAGGAATG | + |
Preference number: 1 (lower is better) Translates to: LSLEVRYFLPEDVQS*EGNMGTPCIAQGGM Trigger: CATTCCTCCCTGAGCAATGCAGGGAGTCCCCATGTTACCCTCTCAGCTTTGAACATCCTCAGGCAAGAAGTATCTCACCTCTAAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR GCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATaGTTCATGAGGAACACGAGACCAAGATGGCGGCTCTCTGCCTTC | + |
Preference number: 1 (lower is better) Translates to: SALVSKRVSLCSDCQ*FMRNTRPRWRLSAF Trigger: GAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR TCA 90 bp | TTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATaGGGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATC | + |
Preference number: 1 (lower is better) Translates to: LSPKGSVCVVTVNAS*GTRDQDGGSLPSQI Trigger: GATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR CCA 90 bp | CAAGAAACACAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATaGAGCTTCCTGCCTCCATGCCTGAATCGAGTACCCAAAGAGGAA | + |
Preference number: 1 (lower is better) Translates to: QETQPSSPSSFSKVL*SFLPPCLNRVPKEE Trigger: TTCCTCTTTGGGTACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTGTGTTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR TCA 90 bp | TTTCTCATGCATTTCCGTATAGTTTGGCGCTGTGAGCCCTGCCTATaGAGGACTGTCAGCAGTGGTTATAAGCATGCCAGGTTTCTAAAA | + |
Preference number: 1 (lower is better) Translates to: FLMHFRIVWRCEPCL*RTVSSGYKHARFLK Trigger: TTTTAGAAACCTGGCATGCTTATAACCACTGCTGACAGTCCTTCATAGGCAGGGCTCACAGCGCCAAACTATACGGAAATGCATGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR CCA 90 bp | TCAAAGCCAGGTCTAAACATGCTTAATTGTATTCTGCCTCCATTGTaGGATGGTAATGCTCGTATTCCACACGTTCTTTCCCTGTACCAG | + |
Preference number: 1 (lower is better) Translates to: SKPGLNMLNCILPPL*DGNARIPHVLSLYQ Trigger: CTGGTACAGGGAAAGAACGTGTGGAATACGAGCATTACCATCCCACAATGGAGGCAGAATACAATTAAGCATGTTTAGACCTGGCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR CCA 90 bp | ATTTCCAATGCTAGAAGCCTAACCAAGAACCCCAAGCTAAGTCATTaGAATCAAAGAGAAGACACCTGGAAAATCATGACATCCTATTGG | + |
Preference number: 1 (lower is better) Translates to: ISNARSLTKNPKLSH*NQREDTWKIMTSYW Trigger: CCAATAGGATGTCATGATTTTCCAGGTGTCTTCTCTTTGATTCCAATGACTTAGCTTGGGGTTCTTGGTTAGGCTTCTAGCATTGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CCA 90 bp | ATTACCTATAGAGATACTTGTCTGCCAAGTGGCATAAAAATAACCTaGGACCAGAATCATTTAATAGCAATGACTAAAGAGGACAGAGTG | + |
Preference number: 1 (lower is better) Translates to: ITYRDTCLPSGIKIT*DQNHLIAMTKEDRV Trigger: CACTCTGTCCTCTTTAGTCATTGCTATTAAATGATTCTGGTCCCAGGTTATTTTTATGCCACTTGGCAGACAAGTATCTCTATAGGTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR CCA 90 bp | AAAAAGAAAGAGAGAGAGAGAGAAAGAAAGAAAAAGTTCTTAGGTTaGGTTGGCTCAAAGCCAGGTCTAAACATGCTTAATTGTATTCTG | + |
Preference number: 1 (lower is better) Translates to: KKKERERERKKKFLG*VGSKPGLNMLNCIL Trigger: CAGAATACAATTAAGCATGTTTAGACCTGGCTTTGAGCCAACCCAACCTAAGAACTTTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR CAA 90 bp | AAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTaGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCTTCAT | + |
Preference number: 2 (lower is better) Translates to: KMAALCLPKSVQHGR*GAQLSPTSSECFLH Trigger: ATGAAGGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR-3UTR GCA 90 bp | GCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCCCAACAAGCTCAGAGTaGTTCCTTCATAATTGGTCC | + |
Preference number: 2 (lower is better) Translates to: AALCLPKSVQHGRLGAQLPTSSE*FLHNWS Trigger: GGACCAATTATGAAGGAAGCACTCTGAGCTTGTTGG...GAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | TCCCAGGGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCTTCTCCAAAGTTCTATaGAGCTTCCTGCCTCCATGC | + |
Preference number: 2 (lower is better) Translates to: SQGRLGNCTAWNTAATNLFSKVL*SFLPPC Trigger: GCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAA...GAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCCCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR GCA 90 bp | GGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCCCAATAAAGATGGCGGCTCTCTaGCTTCCCAAATCTGTCCAA | + |
Preference number: 2 (lower is better) Translates to: GRLGNCTAWNTAATNLPIKMAAL*LPKSVQ Trigger: TTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTT...TATTGGGAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTAGTTTTGTGCTATaGGAAAGCAGTTCTTCTTCC | + |
Preference number: 2 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQSSFVL*ESSSSS Trigger: GGAAGAAGAACTGCTTTCTCATAGCACAAAACTACT...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTGCTCCCAGGGCAGGCTaGGTAACTGCACCGCTTGGA | + |
Preference number: 2 (lower is better) Translates to: HTHFQESTTVSNYCKVFPAPRAG*VTAPLG Trigger: TCCAAGCGGTGCAGTTACCCAGCCTGCCCTGGGAGC...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | CATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTAATGGAGTGGTGGATTaGAGTGTTGGTGTGCTGGCG | + |
Preference number: 2 (lower is better) Translates to: HPIGKPSKSRCISRTTHINGVVD*SVGVLA Trigger: CGCCAGCACACCAACACTTCAATCCACCACTCCATT...AATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGCCAATAGGATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | GTCCTTGGTCAGTGTAGCCATGGGGCTTTGACTCTCCTTAGAGGTGAGATACTTGTCTGGTTTCTGTGGTaGATTCTGTGGGAATCTGCA | + |
Preference number: 2 (lower is better) Translates to: VLGQCSHGALTLLRGEILVWFLW*ILWESA Trigger: TGCAGATTCCCACAGAATCCACCACAGAAACCAGAC...AAGTATCTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACACTGACCAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | TCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATACTGTCAATGCTTCATaGGGAACACGAGACCAAGAT | + |
Preference number: 2 (lower is better) Translates to: SPSSFSKVLWSFLPPCLNTVNAS*GTRDQD Trigger: ATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAGT...ATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | TCCAGGACCACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGGAAGTGTTGGTGTGCTaGCGTTTATCTGAGTCTGGT | + |
Preference number: 2 (lower is better) Translates to: SRTTHIFKSLPLLATTAREVLVC*RLSESG Trigger: ACCAGACTCAGATAAACGCCAGCACACCAACACTTC...CCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTGGTCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | TCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATAAGCAGATCTGGGAATaGAGTGGTGGATTGAAGTGT | + |
Preference number: 2 (lower is better) Translates to: SPSSFSKVLWSFLPPCLNKQIWE*SGGLKC Trigger: ACACTTCAATCCACCACTCCATTCCCAGATCTGCTT...ATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CAA 90 bp | GGCTCAAAGCCAGGTCTAAACATGCTTAATTGTATTCTGCCTCCATaGTGGGATGGTAATGCTCGTATTCCACACGTTCTTTCCCTGTAC | + |
Preference number: 2 (lower is better) Translates to: GSKPGLNMLNCILPP*WDGNARIPHVLSLY Trigger: GTACAGGGAAAGAACGTGTGGAATACGAGCATTACCATCCCACAATGGAGGCAGAATACAATTAAGCATGTTTAGACCTGGCTTTGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | AGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGTAACTGTCAATGCTTCATaGGGAACACGAGACCAAGAT | + |
Preference number: 2 (lower is better) Translates to: SSFSKVLWSFLPPCLNRVTVNAS*GTRDQD Trigger: ATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAGT...TACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | AGACACCTGGAAAATCATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCAGTCTGGTTTCTGTGGTaGATTCTGTGGGAATCTGCA | + |
Preference number: 2 (lower is better) Translates to: RHLENHDILLASQASLDAVWFLW*ILWESA Trigger: TGCAGATTCCCACAGAATCCACCACAGAAACCAGAC...TGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | AGTCTTCGGTGTAAAGCTACTGACAGATTCTACGATCATTCTGGAGACAGAACTCTGGGAATGGAGTGGTaGATTGAAGTGTTGGTGTGC | + |
Preference number: 2 (lower is better) Translates to: SLRCKATDRFYDHSGDRTLGMEW*IEVLVC Trigger: GCACACCAACACTTCAATCCACCACTCCATTCCCAG...AGTTCTGTCTCCAGAATGATCGTAGAATCTGTCAGTAGCTTTACACCGAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR CAA 90 bp | ATTGCTGCTCTTAGCACTGACCACGTCAATGACATTTCTCTGCTCTaGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCA | + |
Preference number: 2 (lower is better) Translates to: IAALSTDHVNDISLL*SPKGSVCVVTVNAS Trigger: TGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGAGAAATGTCATTGACGTGGTCAGTGCTAAGAGCAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR-3UTR GCA 90 bp | TCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCCAACAAGCTCAGAGTaGTTCCTTCATAATTGGTCC | + |
Preference number: 2 (lower is better) Translates to: SESGFCGGFCGNLHKLHIPTSSE*FLHNWS Trigger: GGACCAATTATGAAGGAAGCACTCTGAGCTTGTTGG...AATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR GCA 90 bp | TCCAGGACCACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTGTAGTGACTGTCAATaGTTCATGAGGAACACGAGA | + |
Preference number: 2 (lower is better) Translates to: SRTTHIFKSLPLLATTARCSDCQ*FMRNTR Trigger: TCTCGTGTTCCTCATGAAGCATTGACAGTCACTACA...CCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTGGTCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR GCA 90 bp | TCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATTCAATGACATTTCTCTaGTCTTGTCTCCAAAAGGGT | + |
Preference number: 2 (lower is better) Translates to: SPSSFSKVLWSFLPPCLNSMTFL*SCLQKG Trigger: ACCCTTTTGGAGACAAGAGCAGAGAAATGTCATTGA...ATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTGTTGGAGAGAAATTCTaGAGAGTCCTTGGTCAGTGT | + |
Preference number: 2 (lower is better) Translates to: HTHFQESTTVSNYCKVFPVGEKF*RVLGQC Trigger: ACACTGACCAAGGACTCTTCAGAATTTCTCTCCAAC...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | AGTCTTCGGTGTAAAGCTACTGACAGATTCTACGATCATTCTGGAGACAGAACTACACCTGGAAAATCATaGCATCCTATTGGCAAGCCA | + |
Preference number: 2 (lower is better) Translates to: SLRCKATDRFYDHSGDRTTPGKS*HPIGKP Trigger: TGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGT...AGTTCTGTCTCCAGAATGATCGTAGAATCTGTCAGTAGCTTTACACCGAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | AGTCTTCGGTGTAAAGCTACTGACAGATTCTACGATCATTCTGGAGACAGAACTCTGTGGTGGATTCTGTaGGAATCTGCACAAGTTACA | + |
Preference number: 2 (lower is better) Translates to: SLRCKATDRFYDHSGDRTLWWIL*ESAQVT Trigger: TGTAACTTGTGCAGATTCCCACAGAATCCACCACAG...AGTTCTGTCTCCAGAATGATCGTAGAATCTGTCAGTAGCTTTACACCGAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | TCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTAGTAGTTTTGTGCTATaGGAAAGCAGTTCTTCTTCC | + |
Preference number: 2 (lower is better) Translates to: SESGFCGGFCGNLHKLHISSFVL*ESSSSS Trigger: GGAAGAAGAACTGCTTTCTCATAGCACAAAACTACT...AATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR GCA 90 bp | ACGTTTGTACAATTAAATAGATCTGTGGCTGCCGATGTCCTAGTGAATGGTCAACCAACAAGCTCAGAGTaGTTCCTTCATAATTGGTCC | + |
Preference number: 2 (lower is better) Translates to: TFVQLNRSVAADVLVNGQPTSSE*FLHNWS Trigger: GGACCAATTATGAAGGAAGCACTCTGAGCTTGTTGG...TTGACCATTCACTAGGACATCGGCAGCCACAGATCTATTTAATTGTACAAACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | AAGAGTCCAAGAAACACAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAAAGTCTTCCATGCTaGTACCCTGTTTTGTTCAAT | + |
Preference number: 2 (lower is better) Translates to: KSPRNTTKLPKFFLQSSMESLPC*YPVLFN Trigger: ATTGAACAAAACAGGGTACCAGCATGGAAGACTTTC...CATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTGTGTTTCTTGGACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | AGTCTTCGGTGTAAAGCTACTGACAGATTCTACGATCATTCTGGAGACAGAACTGTAATTCTAGCAAACTaGAGGCAAATAATCCAGTTG | + |
Preference number: 2 (lower is better) Translates to: SLRCKATDRFYDHSGDRTVILAN*RQIIQL Trigger: CAACTGGATTATTTGCCTTCAGTTTGCTAGAATTAC...AGTTCTGTCTCCAGAATGATCGTAGAATCTGTCAGTAGCTTTACACCGAAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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3UTR-3UTR CCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTACACATTCTTGTGCATaGGTTGATAAAGTGATGGAA | + |
Preference number: 2 (lower is better) Translates to: HTHFQESTTVSNYCKVFPTHSCA*VDKVME Trigger: TTCCATCACTTTATCAACCCATGCACAAGAATGTGT...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR TCA 90 bp | TTCAGGTTTCATTTTAAGAAAGTCTTCCATGCTGGTACCCTGTTTTGTTCAATTAGTAGTTTTGTGCTATaGGAAAGCAGTTCTTCTTCC | + |
Preference number: 2 (lower is better) Translates to: FRFHFKKVFHAGTLFCSISSFVL*ESSSSS Trigger: GGAAGAAGAACTGCTTTCTCATAGCACAAAACTACT...AATTGAACAAAACAGGGTACCAGCATGGAAGACTTTCTTAAAATGAAACCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR CCA 72 bp | GATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATaGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTC | + |
Preference number: 3 (lower is better) Translates to: DGGSLPSQICPT*PLGGATLPNKL Trigger: GAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR CCA 72 bp | CTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTaGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCT | + |
Preference number: 3 (lower is better) Translates to: LSAFPNLSNMAA*GRNSPQQAQSA Trigger: AGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR GCA 72 bp | CTTCATGAGGAACACGAGACCAAGATGGCGGCTCTCTaGCTTCCCAAATCTGTCCAACATGGCCGCTTGGGG | + |
Preference number: 3 (lower is better) Translates to: LHEEHETKMAAL*LPKSVQHGRLG Trigger: CCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCCTCATGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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3UTR-3UTR CAA 90 bp | GGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCCCAATAGAATGGAGTGGTGGATaGAAGTGTTGGTGTGCTGGC | + |
Preference number: 3 (lower is better) Translates to: GRLGNCTAWNTAATNLPIEWSGG*KCWCAG Trigger: GCCAGCACACCAACACTTCAATCCACCACTCCATTC...TATTGGGAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR TCA 72 bp | GAGGAAGGACTGTGGGGCTCTGTTGGAGAGAAATTCTaGAGAGTCCTTGGTCAGTGTAGCCATGGGGCTTTG | + |
Preference number: 3 (lower is better) Translates to: EEGLWGSVGEKF*RVLGQCSHGAL Trigger: CAAAGCCCCATGGCTACACTGACCAAGGACTCTTCAGAATTTCTCTCCAACAGAGCCCCACAGTCCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR TCA 72 bp | TCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTaGATCGAGTACCCAAAGAGGAAGGACTGTGGGGCT | + |
Preference number: 3 (lower is better) Translates to: SPKFYGASCLHA*IEYPKRKDCGA Trigger: AGCCCCACAGTCCTTCCTCTTTGGGTACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR TCA 72 bp | CATTTCCGTATAGTTTGGCGCTGTGAGCCCTGCCTATaGAGGACTGTCAGCAGTGGTTATAAGCATGCCAGG | + |
Preference number: 3 (lower is better) Translates to: HFRIVWRCEPCL*RTVSSGYKHAR Trigger: CCTGGCATGCTTATAACCACTGCTGACAGTCCTTCATAGGCAGGGCTCACAGCGCCAAACTATACGGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
||
3UTR CCA 72 bp | GACTGTCAATGCTTCATGAGGAACACGAGACCAAGATaGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATG | + |
Preference number: 3 (lower is better) Translates to: DCQCFMRNTRPR*RLSAFPNLSNM Trigger: CATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
3UTR CCA 72 bp | CAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATaGAGCTTCCTGCCTCCATGCCTGAATCGAGTACCC | + |
Preference number: 3 (lower is better) Translates to: QPSSPSSFSKVL*SFLPPCLNRVP Trigger: GGGTACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR TCA 72 bp | AAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATaGGGAACACGAGACCAAGATGGCGGCTCTCTGCCT | + |
Preference number: 3 (lower is better) Translates to: KGSVCVVTVNAS*GTRDQDGGSLP Trigger: AGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCCTCATGAAGCATTGACAGTCACTACACAAACTGACCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
3UTR TCA 72 bp | TCTGAAGAGTCCTTGGTCAGTGTAGCCATGGGGCTTTaGCTCTCCTTAGAGGTGAGATACTTCTTGCCTGAG | + |
Preference number: 3 (lower is better) Translates to: SEESLVSVAMGL*LSLEVRYFLPE Trigger: CTCAGGCAAGAAGTATCTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACACTGACCAAGGACTCTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR GCA 72 bp | TCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATaGCTGAATCGAGTACCCAAAGAGGAAGGACTGTGG | + |
Preference number: 3 (lower is better) Translates to: SFSKVLWSFLPP*LNRVPKEEGLW Trigger: CCACAGTCCTTCCTCTTTGGGTACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR CCA 72 bp | CTGGGAATGGAGTGGTGGATTGAAGTGTTGGTGTGCTaGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTC | + |
Preference number: 3 (lower is better) Translates to: LGMEWWIEVLVC*RLSESGFCGGF Trigger: GAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACACCAACACTTCAATCCACCACTCCATTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR-3UTR CAA 90 bp | AGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGTATGTAGCCATGGGGCTTaGACTCTCCTTAGAGGTGAG | + |
Preference number: 3 (lower is better) Translates to: SSFSKVLWSFLPPCLNRVCSHGA*TLLRGE Trigger: CTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACA...TACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR TCA 72 bp | GGTTTTTCTCATGCATTTCCGTATAGTTTGGCGCTGTaGGCCCTGCCTATGAAGGACTGTCAGCAGTGGTTA | + |
Preference number: 3 (lower is better) Translates to: GFSHAFPYSLAL*ALPMKDCQQWL Trigger: TAACCACTGCTGACAGTCCTTCATAGGCAGGGCTCACAGCGCCAAACTATACGGAAATGCATGAGAAAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
||
3UTR-3UTR CAA 90 bp | AGACACCTGGAAAATCATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATGTAGCCATGGGGCTTaGACTCTCCTTAGAGGTGAG | + |
Preference number: 3 (lower is better) Translates to: RHLENHDILLASQASLDACSHGA*TLLRGE Trigger: CTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACA...TGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR-3UTR CAA 90 bp | TGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCGTTCATAACAAAGAATaGCTGCTCTTAGCACTGACC | + |
Preference number: 3 (lower is better) Translates to: CAGVYLSLVSVVDSVGICVHNKE*LLLALT Trigger: GGTCAGTGCTAAGAGCAGCAATTCTTTGTTATGAAC...GCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR-3UTR CAA 90 bp | AGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCTACTGGTGGATTGAAGTGTaGGTGTGCTGGCGTTTATCT | + |
Preference number: 3 (lower is better) Translates to: SQASLDASPGPHTFSRVYWWIEV*VCWRLS Trigger: AGATAAACGCCAGCACACCAACACTTCAATCCACCA...GTAGACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
3UTR TCA 72 bp | AACGCTTCACCAAGATTGGACACCATAAGGGATCTGTaGACTAGAAAGCAGATCTGGGAATGGAGTGGTGGA | + |
Preference number: 3 (lower is better) Translates to: NASPRLDTIRDL*TRKQIWEWSGG Trigger: TCCACCACTCCATTCCCAGATCTGCTTTCTAGTTCACAGATCCCTTATGGTGTCCAATCTTGGTGAAGCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CAA 90 bp | AGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCTACTCCAAAAGGGTCAGTTaGTGTAGTGACTGTCAATGC | + |
Preference number: 3 (lower is better) Translates to: SQASLDASPGPHTFSRVYSKRVS*CSDCQC Trigger: GCATTGACAGTCACTACACAAACTGACCCTTTTGGA...GTAGACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CAA 90 bp | GCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCGTTCATAACAAAGAATaGCTGCTCTTAGCACTGACC | + |
Preference number: 3 (lower is better) Translates to: ASQASLDASPGPHTFSRVVHNKE*LLLALT Trigger: GGTCAGTGCTAAGAGCAGCAATTCTTTGTTATGAAC...GACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CAA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTAATTCTGAAGAGTCCTaGGTCAGTGTAGCCATGGGG | + |
Preference number: 3 (lower is better) Translates to: HTHFQESTTVSNYCKVFPNSEES*VSVAMG Trigger: CCCCATGGCTACACTGACCAAGGACTCTTCAGAATT...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR-3UTR CAA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTGACTGTGGGGCTCTGTaGGAGAGAAATTCTGAAGAG | + |
Preference number: 3 (lower is better) Translates to: HTHFQESTTVSNYCKVFPDCGAL*ERNSEE Trigger: CTCTTCAGAATTTCTCTCCAACAGAGCCCCACAGTC...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR TCA 72 bp | GTCATTGGAATCAAAGAGAAGACACCTGGAAAATCATaGCATCCTATTGGCAAGCCAAGCAAGTCTAGATGC | + |
Preference number: 3 (lower is better) Translates to: VIGIKEKTPGKS*HPIGKPSKSRC Trigger: GCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGTCTTCTCTTTGATTCCAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CCA 72 bp | CCCAAGCTAAGTCATTGGAATCAAAGAGAAGACACCTaGAAAATCATGACATCCTATTGGCAAGCCAAGCAA | + |
Preference number: 3 (lower is better) Translates to: PKLSHWNQREDT*KIMTSYWQAKQ Trigger: TTGCTTGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGTCTTCTCTTTGATTCCAATGACTTAGCTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CCA 72 bp | GCTAGAAGCCTAACCAAGAACCCCAAGCTAAGTCATTaGAATCAAAGAGAAGACACCTGGAAAATCATGACA | + |
Preference number: 3 (lower is better) Translates to: ARSLTKNPKLSH*NQREDTWKIMT Trigger: TGTCATGATTTTCCAGGTGTCTTCTCTTTGATTCCAATGACTTAGCTTGGGGTTCTTGGTTAGGCTTCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CCA 72 bp | GGTCTAAACATGCTTAATTGTATTCTGCCTCCATTGTaGGATGGTAATGCTCGTATTCCACACGTTCTTTCC | + |
Preference number: 3 (lower is better) Translates to: GLNMLNCILPPL*DGNARIPHVLS Trigger: GGAAAGAACGTGTGGAATACGAGCATTACCATCCCACAATGGAGGCAGAATACAATTAAGCATGTTTAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCGCTGAGGCGTGGAGCTaGAGGAGTATCCCCGCGGGG | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASAEAWS*RSIPAG Trigger: CCCCGCGGGGATACTCCTCCAGCTCCACGCCTCAGC...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCCCAGGGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCGGATGGAGGACGTGCTaGAGGATCCCACGGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: SQGRLGNCTAWNTAATNLGWRTC*RIPRWG Trigger: GCCCCACCGTGGGATCCTCCAGCACGTCCTCCATCC...GAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCCCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCATGGACTCTGAAATGCTaGCGCCGAGCTGGCTGCCGT | + |
Preference number: 4 (lower is better) Translates to: DGGSLPSQICPTWPLGGAWTLKC*RRAGCR Trigger: ACGGCAGCCAGCTCGGCGTCAGCATTTCAGAGTCCA...TGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCGGAGGATGGAGGACGTaGTGGAGGATCCCACGGTGG | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASGGWRT*WRIPRW Trigger: CCACCGTGGGATCCTCCAGCACGTCCTCCATCCTCC...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCATCTGAGCCGCGACATTaGCGTCCACCACGCCGACAT | + |
Preference number: 4 (lower is better) Translates to: DGGSLPSQICPTWPLGGASEPRH*RPPRRH Trigger: ATGTCGGCGTGGTGGACGCCAATGTCGCGGCTCAGA...TGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCGTCCTGTCATGGCTCTaGATCCGTTCCCATTGCCGC | + |
Preference number: 4 (lower is better) Translates to: AALCLPKSVQHGRLGAQLVLSWL*IRSHCR Trigger: GCGGCAATGGGAACGGATTCAGAGCCATGACAGGAC...GAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTGGAGGATGGAGGACGTaGTGGAGGATCCCACGGTGG | + |
Preference number: 4 (lower is better) Translates to: CPTWPLGGATLPNKLRVLGGWRT*WRIPRW Trigger: CCACCGTGGGATCCTCCAGCACGTCCTCCATCCTCC...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCTCTGAGCCGCGACATTaGCGTCCACCACGCCGACAT | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASSEPRH*RPPRRH Trigger: ATGTCGGCGTGGTGGACGCCAATGTCGCGGCTCAGA...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCCCAATAGGCGATGGGGAGCCTTaGGGCCTGATGACAGGGGCA | + |
Preference number: 4 (lower is better) Translates to: GRLGNCTAWNTAATNLPIGDGEP*GLMTGA Trigger: TGCCCCTGTCATCAGGCCCCAAGGCTCCCCATCGCC...TATTGGGAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGAGCAGGCAGGCGATaGGGAGCCTTGGGGCCTGAT | + |
Preference number: 4 (lower is better) Translates to: ETKMAALCLPKSVQHGRLGAGRR*GALGPD Trigger: ATCAGGCCCCAAGGCTCCCCATCGCCTGCCTGCTCC...CAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCCCCATCATACCGCTGTaGGCTGGGGAGCTGGAAAGA | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASPIIPL*AGELER Trigger: TCTTTCCAGCTCCCCAGCTCACAGCGGTATGATGGG...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCTCTGGCTGGGGTTCCTaGGGACACTGTACAGGGCTT | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASSGWGS*GHCTGL Trigger: AAGCCCTGTACAGTGTCCCCAGGAACCCCAGCCAGA...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGGGATGGAGGACGTGCTaGAGGATCCCACGGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWGWRTC*RIPRWG Trigger: GCCCCACCGTGGGATCCTCCAGCACGTCCTCCATCC...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGGGCGATGGGGAGCCTTaGGGCCTGATGACAGGGGCA | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWGDGEP*GLMTGA Trigger: TGCCCCTGTCATCAGGCCCCAAGGCTCCCCATCGCC...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCGGAGCAGGCAGGCGATaGGGAGCCTTGGGGCCTGAT | + |
Preference number: 4 (lower is better) Translates to: EHETKMAALCLPKSVQHGGAGRR*GALGPD Trigger: ATCAGGCCCCAAGGCTCCCCATCGCCTGCCTGCTCC...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGTTCCCATTGCCGCTaGAGCAGGCAGGCGATGGGG | + |
Preference number: 4 (lower is better) Translates to: EHETKMAALCLPKSVQHGRSHCR*SRQAMG Trigger: CCCCATCGCCTGCCTGCTCCAGCGGCAATGGGAACG...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR TCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGTCCGGACCCAGGACCTaGCCGAATCCATCTCGGCAC | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWSGPRT*PNPSRH Trigger: GTGCCGAGATGGATTCGGTCAGGTCCTGGGTCCGGA...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCCCCATCATACCGCTGTaGGCTGGGGAGCTGGAAAGA | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRPIIPL*AGELER Trigger: TCTTTCCAGCTCCCCAGCTCACAGCGGTATGATGGG...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR GCA 90 bp | GATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCACCGTGCGGACACCGTTaGTGTAAAGGAGCTGTAACT | + |
Preference number: 4 (lower is better) Translates to: DGGSLPSQICPTWPLGGAPCGHR*CKGAVT Trigger: AGTTACAGCTCCTTTACAGCAACGGTGTCCGCACGG...TGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR GCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCCTGACATACAGGTCCTaGTCCGTGCGGACACCGTTG | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRLTYRS*SVRTPL Trigger: CAACGGTGTCCGCACGGAGCAGGACCTGTATGTCAG...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR GCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCCCCGCGGGGAGATGCTaGTTGTGTTGCGGATGTATC | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRPAGRC*LCCGCI Trigger: GATACATCCGCAACACAAGCAGCATCTCCCCGCGGG...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR GCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCATCCCCGCGGGGAGATaGTGCTTGTGTTGCGGATGT | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRIPAGR*CLCCGC Trigger: ACATCCGCAACACAAGCAGCATCTCCCCGCGGGGAT...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTGCTGTAGCCGTTCATaGTGTTGCTGGAGGTGCTGT | + |
Preference number: 4 (lower is better) Translates to: AALCLPKSVQHGRLGAQLCCSRS*CCWRCC Trigger: ACAGCACCTCCAGCAACAGCATGAACGGCTACAGCA...GAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCATGGCCCCTCCTGTaGTCCAGCCTTCACTTGGGC | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWPWPLL*SSLHLG Trigger: GCCCAAGTGAAGGCTGGACCACAGGAGGGGCCATGG...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTTCTGGCTGGGGTTCCTaGGGACACTGTACAGGGCTT | + |
Preference number: 4 (lower is better) Translates to: CPTWPLGGATLPNKLRVLSGWGS*GHCTGL Trigger: AAGCCCTGTACAGTGTCCCCAGGAACCCCAGCCAGA...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCAGGAGAACGGGAGGATaGAGGACGTGCTGGAGGATC | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRRRTGG*RTCWRI Trigger: GATCCTCCAGCACGTCCTCCATCCTCCCGTTCTCCT...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCACTGGGTGCCTTGGGATaGCTTTCTGCAATCTTTGGA | + |
Preference number: 4 (lower is better) Translates to: DGGSLPSQICPTWPLGGALGALG*LSAIFG Trigger: TCCAAAGATTGCAGAAAGTCATCCCAAGGCACCCAG...TGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGCTGACATACAGGTCCTaGTCCGTGCGGACACCGTTG | + |
Preference number: 4 (lower is better) Translates to: ETKMAALCLPKSVQHGRLLTYRS*SVRTPL Trigger: CAACGGTGTCCGCACGGAGCAGGACCTGTATGTCAG...CAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCTGCTGTAGCCGTTCATaGTGTTGCTGGAGGTGCTGT | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASCCSRS*CCWRCC Trigger: ACAGCACCTCCAGCAACAGCATGAACGGCTACAGCA...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCCCTCTCAGGGTCACCTaGGTGCCTTGGGATGACTTT | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRPLRVT*VPWDDF Trigger: AAAGTCATCCCAAGGCACCCAGGTGACCCTGAGAGG...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGTGTGAGCTGGGGAGCTaGAAAGAGCTGGAATCTGGC | + |
Preference number: 4 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQCELGS*KELESG Trigger: GCCAGATTCCAGCTCTTTCCAGCTCCCCAGCTCACA...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TCCCAGGGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCTGTACTCTGATGGCATaGGGGGTTATGAGCTCACTC | + |
Preference number: 4 (lower is better) Translates to: SQGRLGNCTAWNTAATNLCTLMA*GVMSSL Trigger: GAGTGAGCTCATAACCCCTCATGCCATCAGAGTACA...GAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCCCTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCCTGGGTGCCTTGGGATaGCTTTCTGCAATCTTTGGA | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASLGALG*LSAIFG Trigger: TCCAAAGATTGCAGAAAGTCATCCCAAGGCACCCAG...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTGGGTCAAGCCTTCTTaGTCTCCTTCCATGCTTAGA | + |
Preference number: 4 (lower is better) Translates to: AALCLPKSVQHGRLGAQLWVKPS*SPSMLR Trigger: TCTAAGCATGGAAGGAGAGCAAGAAGGCTTGACCCA...GAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCATGCCCGGGGCTCCTTTaGAGAACTGTTTGGATTTAT | + |
Preference number: 4 (lower is better) Translates to: DGGSLPSQICPTWPLGGACPGLL*RTVWIY Trigger: ATAAATCCAAACAGTTCTGCAAAGGAGCCCCGGGCA...TGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGCCGCCTCATGTCCCTTaGGTTTCCCGCTGTTTTCAA | + |
Preference number: 4 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQPPHVP*VSRCFQ Trigger: TTGAAAACAGCGGGAAACCCAAGGGACATGAGGCGG...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCGAGCTGGAATCTGGCTaGGGTTCCTGGGGACACTGT | + |
Preference number: 4 (lower is better) Translates to: EHETKMAALCLPKSVQHGELESG*GSWGHC Trigger: ACAGTGTCCCCAGGAACCCCAGCCAGATTCCAGCTC...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGCTGAGGCGTGGAGCTaGAGGAGTATCCCCGCGGGG | + |
Preference number: 4 (lower is better) Translates to: PSSFSKVLWSFLPPCLNRAEAWS*RSIPAG Trigger: CCCCGCGGGGATACTCCTCCAGCTCCACGCCTCAGC...TCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCCATATGGGGAGCCCGTaGGTGAGCCATTCAGAAATC | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRHMGSP*VSHSEI Trigger: GATTTCTGAATGGCTCACCCACGGGCTCCCCATATG...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCTTAAGGCTGTGTAGATaGACCTGCCCGGGGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: EHETKMAALCLPKSVQHGLRLCR*TCPGLL Trigger: AAGGAGCCCCGGGCAGGTTCATCTACACAGCCTTAA...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCCAGGGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCTGCCCGGGGCTCCTTTaGAGAACTGTTTGGATTTAT | + |
Preference number: 4 (lower is better) Translates to: SQGRLGNCTAWNTAATNLCPGLL*RTVWIY Trigger: ATAAATCCAAACAGTTCTGCAAAGGAGCCCCGGGCA...GAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCCCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTGATTATTGTGTGGTGTaGCGTAGAGGGCTTCCACCA | + |
Preference number: 4 (lower is better) Translates to: CPTWPLGGATLPNKLRVLDYCVV*RRGLPP Trigger: TGGTGGAAGCCCTCTACGGCACACCACACAATAATC...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCCCAATACCGCCTCATGTCCCTTaGGTTTCCCGCTGTTTTCAA | + |
Preference number: 4 (lower is better) Translates to: GRLGNCTAWNTAATNLPIPPHVP*VSRCFQ Trigger: TTGAAAACAGCGGGAAACCCAAGGGACATGAGGCGG...TATTGGGAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTGGGTGTAGCTTCAGATaGGTCAAGCCTTCTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: CPTWPLGGATLPNKLRVLGCSFR*VKPSCS Trigger: AGAGCAAGAAGGCTTGACCCATCTGAAGCTACACCC...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCCACTCCATACAAGCATaGTACCAAACACAACCTGGA | + |
Preference number: 4 (lower is better) Translates to: AALCLPKSVQHGRLGAQLHSIQA*YQTQPG Trigger: TCCAGGTTGTGTTTGGTACCATGCTTGTATGGAGTG...GAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGGTCACCTGGGTGCCTTaGGATGACTTTCTGCAATCT | + |
Preference number: 4 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQVTWVP*DDFLQS Trigger: AGATTGCAGAAAGTCATCCCAAGGCACCCAGGTGAC...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCTCTCAGGGTCACCTaGGTGCCTTGGGATGACTTT | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWPLRVT*VPWDDF Trigger: AAAGTCATCCCAAGGCACCCAGGTGACCCTGAGAGG...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAAGTGTTGGTGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGCGATGGGGAGCCTTaGGGCCTGATGACAGGGGCA | + |
Preference number: 4 (lower is better) Translates to: EVLVCWRLSESGFCGGFCGDGEP*GLMTGA Trigger: TGCCCCTGTCATCAGGCCCCAAGGCTCCCCATCGCC...ACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACACCAACACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAAGTGTTGGTGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTCGTTCCCATTGCCGCTaGAGCAGGCAGGCGATGGGG | + |
Preference number: 4 (lower is better) Translates to: EVLVCWRLSESGFCGGFCRSHCR*SRQAMG Trigger: CCCCATCGCCTGCCTGCTCCAGCGGCAATGGGAACG...ACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACACCAACACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GAAGTGTTGGTGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTTCCGGACCCAGGACCTaGCCGAATCCATCTCGGCAC | + |
Preference number: 4 (lower is better) Translates to: EVLVCWRLSESGFCGGFCSGPRT*PNPSRH Trigger: GTGCCGAGATGGATTCGGTCAGGTCCTGGGTCCGGA...ACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACACCAACACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTGCCCGGGGCTCCTTTaGAGAACTGTTTGGATTTAT | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRCPGLL*RTVWIY Trigger: ATAAATCCAAACAGTTCTGCAAAGGAGCCCCGGGCA...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCACATTTACTGTTGTaGACAACACGACCTGGAACC | + |
Preference number: 4 (lower is better) Translates to: CPTWPLGGATLPNKLRVLPHLLL*TTRPGT Trigger: GGTTCCAGGTCGTGTTGTCCACAACAGTAAATGTGG...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCCCAATAGGGTGTAGCTTCAGATaGGTCAAGCCTTCTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: GRLGNCTAWNTAATNLPIGCSFR*VKPSCS Trigger: AGAGCAAGAAGGCTTGACCCATCTGAAGCTACACCC...TATTGGGAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | AGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGTAGGATGGAGGACGTGCTaGAGGATCCCACGGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: SSFSKVLWSFLPPCLNRVGWRTC*RIPRWG Trigger: GCCCCACCGTGGGATCCTCCAGCACGTCCTCCATCC...TACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | AGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGTACGTTCCCATTGCCGCTaGAGCAGGCAGGCGATGGGG | + |
Preference number: 4 (lower is better) Translates to: SSFSKVLWSFLPPCLNRVRSHCR*SRQAMG Trigger: CCCCATCGCCTGCCTGCTCCAGCGGCAATGGGAACG...TACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGGCACTCTTCTGTTTaGCAGCAGGAAAAACTGAAG | + |
Preference number: 4 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQRHSSV*QQEKLK Trigger: CTTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCT...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCAAGTTTGAAGGAGGTTaGTTTTCAAAATGGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: HETKMAALCLPKSVQHGRKFEGG*FSKWAR Trigger: CCGGGCCCATTTTGAAAAGCAACCTCCTTCAAACTT...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAAGTTTGAAGGAGGTTaGTTTTCAAAATGGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQKFEGG*FSKWAR Trigger: CCGGGCCCATTTTGAAAAGCAACCTCCTTCAAACTT...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCAGTCCACGAAGGCTGTaGGCTCAATCTCCACCGGCT | + |
Preference number: 4 (lower is better) Translates to: CAGVYLSLVSVVDSVGICSPRRL*AQSPPA Trigger: AGCCGGTGGAGATTGAGCGCACAGCCTTCGTGGACT...GCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCCAGGGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCGTCTTCTCATTGCCTTaGTCTTTGTCATTCTCCACA | + |
Preference number: 4 (lower is better) Translates to: SQGRLGNCTAWNTAATNLVFSLP*SLSFST Trigger: TGTGGAGAATGACAAAGAGCAAGGCAATGAGAAGAC...GAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCCCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAACTGACATACAGGTCCTaGTCCGTGCGGACACCGTTG | + |
Preference number: 4 (lower is better) Translates to: LPKFFLQSSMELPASMPELTYRS*SVRTPL Trigger: CAACGGTGTCCGCACGGAGCAGGACCTGTATGTCAG...TTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCCAGGGCAGGCTGGGTAACTGCACCGCTTGGAACACAGCTGCCACGAATCTCAGATGCTGCTTGTGTTaGGGATGTATCCTTGGTTAT | + |
Preference number: 4 (lower is better) Translates to: SQGRLGNCTAWNTAATNLRCCLC*GCILGY Trigger: ATAACCAAGGATACATCCGCAACACAAGCAGCATCT...GAGATTCGTGGCAGCTGTGTTCCAAGCGGTGCAGTTACCCAGCCTGCCCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAACCCGCGGGGAGATGCTaGTTGTGTTGCGGATGTATC | + |
Preference number: 4 (lower is better) Translates to: LPKFFLQSSMELPASMPEPAGRC*LCCGCI Trigger: GATACATCCGCAACACAAGCAGCATCTCCCCGCGGG...TTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCAGTGAGTACCATTGTTaGTCTTCTCATTGCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASSEYHC*SSHCLA Trigger: AGCAAGGCAATGAGAAGACCAACAATGGTACTCACT...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGGGAGCAGGCAGGCGATaGGGAGCCTTGGGGCCTGAT | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMGAGRR*GALGPD Trigger: ATCAGGCCCCAAGGCTCCCCATCGCCTGCCTGCTCC...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR TCA 90 bp | CTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATTAAGGCTGTGTAGATaGACCTGCCCGGGGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: LPKFFLQSSMELPASMPELRLCR*TCPGLL Trigger: AAGGAGCCCCGGGCAGGTTCATCTACACAGCCTTAA...TTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
CDS-3UTR TCA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCTTTAAAATGATGTCCTaGTTATTGTGTGGTGTGCCG | + |
Preference number: 4 (lower is better) Translates to: SNMAAWGRNSPQQAQSASFKMMS*LLCGVP Trigger: CGGCACACCACACAATAATCAGGACATCATTTTAAA...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGATGCTGCTTGTGTTaGGGATGTATCCTTGGTTAT | + |
Preference number: 4 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQRCCLC*GCILGY Trigger: ATAACCAAGGATACATCCGCAACACAAGCAGCATCT...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR GCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGGGAGGATGGAGGACGTaGTGGAGGATCCCACGGTGG | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMGGWRT*WRIPRW Trigger: CCACCGTGGGATCCTCCAGCACGTCCTCCATCCTCC...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR CCA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCCACATTTACTGTTGTaGACAACACGACCTGGAACC | + |
Preference number: 4 (lower is better) Translates to: EHETKMAALCLPKSVQHGPHLLL*TTRPGT Trigger: GGTTCCAGGTCGTGTTGTCCACAACAGTAAATGTGG...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR CCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGCCATGGCCCCTCCTGTaGTCCAGCCTTCACTTGGGC | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMPWPLL*SSLHLG Trigger: GCCCAAGTGAAGGCTGGACCACAGGAGGGGCCATGG...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACTGTGAGCTGGGGAGCTaGAAAGAGCTGGAATCTGGC | + |
Preference number: 4 (lower is better) Translates to: HDILLASQASLDASPGPHCELGS*KELESG Trigger: GCCAGATTCCAGCTCTTTCCAGCTCCCCAGCTCACA...GTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
CDS-3UTR CCA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGGCTGAGGCGTGGAGCTaGAGGAGTATCCCCGCGGGG | + |
Preference number: 4 (lower is better) Translates to: TSSECFLHNWSIGISSFVAEAWS*RSIPAG Trigger: CCCCGCGGGGATACTCCTCCAGCTCCACGCCTCAGC...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTGGATTTCCTCAAGTTTaGAGGAGGTTGCTTTTCAAA | + |
Preference number: 4 (lower is better) Translates to: CPTWPLGGATLPNKLRVLGFPQV*RRLLFK Trigger: TTTGAAAAGCAACCTCCTTCAAACTTGAGGAAATCC...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | CATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTAAGGCTGTGTAGATaGACCTGCCCGGGGCTCCTT | + |
Preference number: 4 (lower is better) Translates to: HPIGKPSKSRCISRTTHILRLCR*TCPGLL Trigger: AAGGAGCCCCGGGCAGGTTCATCTACACAGCCTTAA...AATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGCCAATAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
CDS-3UTR TCA 90 bp | AGACACCTGGAAAATCATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATGGACTCTGAAATGCTaGCGCCGAGCTGGCTGCCGT | + |
Preference number: 4 (lower is better) Translates to: RHLENHDILLASQASLDAWTLKC*RRAGCR Trigger: ACGGCAGCCAGCTCGGCGTCAGCATTTCAGAGTCCA...TGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGAGGCACTCTTCTGTTTaGCAGCAGGAAAAACTGAAG | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWRHSSV*QQEKLK Trigger: CTTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCT...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGTCTTCTCATTGCCTTaGTCTTTGTCATTCTCCACA | + |
Preference number: 4 (lower is better) Translates to: ETKMAALCLPKSVQHGRLVFSLP*SLSFST Trigger: TGTGGAGAATGACAAAGAGCAAGGCAATGAGAAGAC...CAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTTGTTGGTCTTCTCATTaGCTTGCTCTTTGTCATTCT | + |
Preference number: 4 (lower is better) Translates to: CPTWPLGGATLPNKLRVLCWSSH*LALCHS Trigger: AGAATGACAAAGAGCAAGGCAATGAGAAGACCAACA...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCCCGCCTCATGTCCCTTaGGTTTCCCGCTGTTTTCAA | + |
Preference number: 4 (lower is better) Translates to: CAGVYLSLVSVVDSVGICPPHVP*VSRCFQ Trigger: TTGAAAACAGCGGGAAACCCAAGGGACATGAGGCGG...GCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTCCATGGCCCCTCCTGTaGTCCAGCCTTCACTTGGGC | + |
Preference number: 4 (lower is better) Translates to: HTHFQESTTVSNYCKVFPPWPLL*SSLHLG Trigger: GCCCAAGTGAAGGCTGGACCACAGGAGGGGCCATGG...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | AGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGTAGAGCTGGAATCTGGCTaGGGTTCCTGGGGACACTGT | + |
Preference number: 4 (lower is better) Translates to: SSFSKVLWSFLPPCLNRVELESG*GSWGHC Trigger: ACAGTGTCCCCAGGAACCCCAGCCAGATTCCAGCTC...TACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGGAGCTGGAAAGAGCTaGAATCTGGCTGGGGTTCCT | + |
Preference number: 4 (lower is better) Translates to: PSSFSKVLWSFLPPCLNRGAGKS*NLAGVP Trigger: AGGAACCCCAGCCAGATTCCAGCTCTTTCCAGCTCC...TCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGTTGCGGATGTATCCTTaGTTATTTCCTTGTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: ETKMAALCLPKSVQHGRLLRMYP*LFPCVD Trigger: GTCCACACAAGGAAATAACCAAGGATACATCCGCAA...CAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GTCCTTGGTCAGTGTAGCCATGGGGCTTTGACTCTCCTTAGAGGTGAGATACTTCATATGGGGAGCCCGTaGGTGAGCCATTCAGAAATC | + |
Preference number: 4 (lower is better) Translates to: VLGQCSHGALTLLRGEILHMGSP*VSHSEI Trigger: GATTTCTGAATGGCTCACCCACGGGCTCCCCATATG...AAGTATCTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACACTGACCAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCTTGTGCATGGGTTGAGGAGAACGGGAGGATaGAGGACGTGCTGGAGGATC | + |
Preference number: 4 (lower is better) Translates to: CGGFCGNLHKLHILVHGLRRTGG*RTCWRI Trigger: GATCCTCCAGCACGTCCTCCATCCTCCCGTTCTCCT...CAACCCATGCACAAGAATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGTCCGGACCCAGGACCTaGCCGAATCCATCTCGGCAC | + |
Preference number: 4 (lower is better) Translates to: TSSECFLHNWSIGISSFVSGPRT*PNPSRH Trigger: GTGCCGAGATGGATTCGGTCAGGTCCTGGGTCCGGA...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGCAGCACGCTTTAAAATaGTGTCCTGATTATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: ETKMAALCLPKSVQHGRLQHALK*CPDYCV Trigger: CACACAATAATCAGGACATCATTTTAAAGCGTGCTG...CAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGGTCCTGTCATGGCTCTaGATCCGTTCCCATTGCCGC | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMVLSWL*IRSHCR Trigger: GCGGCAATGGGAACGGATTCAGAGCCATGACAGGAC...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGAGTCCACGAAGGCTGTaGGCTCAATCTCCACCGGCT | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMSPRRL*AQSPPA Trigger: AGCCGGTGGAGATTGAGCGCACAGCCTTCGTGGACT...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCCGTGCGGACACCGTTaGTGTAAAGGAGCTGTAACT | + |
Preference number: 4 (lower is better) Translates to: SPSSFSKVLWSFLPPCLNPCGHR*CKGAVT Trigger: AGTTACAGCTCCTTTACAGCAACGGTGTCCGCACGG...ATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GTCCTTGGTCAGTGTAGCCATGGGGCTTTGACTCTCCTTAGAGGTGAGATACTTGATTATTGTGTGGTGTaGCGTAGAGGGCTTCCACCA | + |
Preference number: 4 (lower is better) Translates to: VLGQCSHGALTLLRGEILDYCVV*RRGLPP Trigger: TGGTGGAAGCCCTCTACGGCACACCACACAATAATC...AAGTATCTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACACTGACCAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAAGATTATTGTGTGGTGTaGCGTAGAGGGCTTCCACCA | + |
Preference number: 4 (lower is better) Translates to: LPKFFLQSSMELPASMPEDYCVV*RRGLPP Trigger: TGGTGGAAGCCCTCTACGGCACACCACACAATAATC...TTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | AGACACCTGGAAAATCATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCACCCGCGGGGAGATGCTaGTTGTGTTGCGGATGTATC | + |
Preference number: 4 (lower is better) Translates to: RHLENHDILLASQASLDAPAGRC*LCCGCI Trigger: GATACATCCGCAACACAAGCAGCATCTCCCCGCGGG...TGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GAGTCCAAGAAACACAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAATCCCCGCGGGGAGATaGTGCTTGTGTTGCGGATGT | + |
Preference number: 4 (lower is better) Translates to: ESKKHNQAPQVLSPKFYGIPAGR*CLCCGC Trigger: ACATCCGCAACACAAGCAGCATCTCCCCGCGGGGAT...TCCATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTGTGTTTCTTGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GAAGTGTTGGTGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTTGCTGTAGCCGTTCATaGTGTTGCTGGAGGTGCTGT | + |
Preference number: 4 (lower is better) Translates to: EVLVCWRLSESGFCGGFCCCSRS*CCWRCC Trigger: ACAGCACCTCCAGCAACAGCATGAACGGCTACAGCA...ACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACACCAACACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGAGTGAGTACCATTGTTaGTCTTCTCATTGCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWSEYHC*SSHCLA Trigger: AGCAAGGCAATGAGAAGACCAACAATGGTACTCACT...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GTCCTTGGTCAGTGTAGCCATGGGGCTTTGACTCTCCTTAGAGGTGAGATACTTGGGTGTAGCTTCAGATaGGTCAAGCCTTCTTGCTCT | + |
Preference number: 4 (lower is better) Translates to: VLGQCSHGALTLLRGEILGCSFR*VKPSCS Trigger: AGAGCAAGAAGGCTTGACCCATCTGAAGCTACACCC...AAGTATCTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACACTGACCAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGAGCCATAGTCTATGGTaGGTTCATTTAAGGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWSHSLW*VHLRLC Trigger: ACACAGCCTTAAATGAACCCACCATAGACTATGGCT...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCTTGTGCATGGGTTGCCTCTCAGGGTCACCTaGGTGCCTTGGGATGACTTT | + |
Preference number: 4 (lower is better) Translates to: CGGFCGNLHKLHILVHGLPLRVT*VPWDDF Trigger: AAAGTCATCCCAAGGCACCCAGGTGACCCTGAGAGG...CAACCCATGCACAAGAATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GAGTCCAAGAAACACAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGAGCTGGAATCTGGCTaGGGTTCCTGGGGACACTGT | + |
Preference number: 4 (lower is better) Translates to: ESKKHNQAPQVLSPKFYGELESG*GSWGHC Trigger: ACAGTGTCCCCAGGAACCCCAGCCAGATTCCAGCTC...TCCATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTGTGTTTCTTGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGTTTAAAATGATGTCCTaGTTATTGTGTGGTGTGCCG | + |
Preference number: 4 (lower is better) Translates to: GTRDQDGGSLPSQICPTWFKMMS*LLCGVP Trigger: CGGCACACCACACAATAATCAGGACATCATTTTAAA...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGTGGACTCTGAAATGCTaGCGCCGAGCTGGCTGCCGT | + |
Preference number: 4 (lower is better) Translates to: TSSECFLHNWSIGISSFVWTLKC*RRAGCR Trigger: ACGGCAGCCAGCTCGGCGTCAGCATTTCAGAGTCCA...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTGTCCTGTCATGGCTCTaGATCCGTTCCCATTGCCGC | + |
Preference number: 4 (lower is better) Translates to: HTHFQESTTVSNYCKVFPVLSWL*IRSHCR Trigger: GCGGCAATGGGAACGGATTCAGAGCCATGACAGGAC...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | AAGAGTCCAAGAAACACAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATGATCCCCGCGGGGAGATaGTGCTTGTGTTGCGGATGT | + |
Preference number: 4 (lower is better) Translates to: KSPRNTTKLPKFFLQSSMIPAGR*CLCCGC Trigger: ACATCCGCAACACAAGCAGCATCTCCCCGCGGGGAT...CATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTGTGTTTCTTGGACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTTCTGGCTGGGGTTCCTaGGGACACTGTACAGGGCTT | + |
Preference number: 4 (lower is better) Translates to: HTHFQESTTVSNYCKVFPSGWGS*GHCTGL Trigger: AAGCCCTGTACAGTGTCCCCAGGAACCCCAGCCAGA...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
||
CDS-3UTR CCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGGGAGCTGGAAAGAGCTaGAATCTGGCTGGGGTTCCT | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMGAGKS*NLAGVP Trigger: AGGAACCCCAGCCAGATTCCAGCTCTTTCCAGCTCC...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR TCA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGCCCATCATACCGCTGTaGGCTGGGGAGCTGGAAAGA | + |
Preference number: 4 (lower is better) Translates to: TSSECFLHNWSIGISSFVPIIPL*AGELER Trigger: TCTTTCCAGCTCCCCAGCTCACAGCGGTATGATGGG...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | AGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGTAGTCACCTGGGTGCCTTaGGATGACTTTCTGCAATCT | + |
Preference number: 4 (lower is better) Translates to: SSFSKVLWSFLPPCLNRVVTWVP*DDFLQS Trigger: AGATTGCAGAAAGTCATCCCAAGGCACCCAGGTGAC...TACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCATATGGGGAGCCCGTaGGTGAGCCATTCAGAAATC | + |
Preference number: 4 (lower is better) Translates to: SESGFCGGFCGNLHKLHIHMGSP*VSHSEI Trigger: GATTTCTGAATGGCTCACCCACGGGCTCCCCATATG...AATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGTGTACTCTGATGGCATaGGGGGTTATGAGCTCACTC | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMCTLMA*GVMSSL Trigger: GAGTGAGCTCATAACCCCTCATGCCATCAGAGTACA...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR TCA 90 bp | AGACACCTGGAAAATCATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATGTACTCTGATGGCATaGGGGGTTATGAGCTCACTC | + |
Preference number: 4 (lower is better) Translates to: RHLENHDILLASQASLDACTLMA*GVMSSL Trigger: GAGTGAGCTCATAACCCCTCATGCCATCAGAGTACA...TGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATGATTTTCCAGGTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | CCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAAAGTTTGAAGGAGGTTaGTTTTCAAAATGGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: PSSFSKVLWSFLPPCLNRKFEGG*FSKWAR Trigger: CCGGGCCCATTTTGAAAAGCAACCTCCTTCAAACTT...TCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | AGTCTTCGGTGTAAAGCTACTGACAGATTCTACGATCATTCTGGAGACAGAACTCCGTGCGGACACCGTTaGTGTAAAGGAGCTGTAACT | + |
Preference number: 4 (lower is better) Translates to: SLRCKATDRFYDHSGDRTPCGHR*CKGAVT Trigger: AGTTACAGCTCCTTTACAGCAACGGTGTCCGCACGG...AGTTCTGTCTCCAGAATGATCGTAGAATCTGTCAGTAGCTTTACACCGAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
||
CDS-3UTR GCA 90 bp | AGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCTACTGGGTCAAGCCTTCTTaGTCTCCTTCCATGCTTAGA | + |
Preference number: 4 (lower is better) Translates to: SQASLDASPGPHTFSRVYWVKPS*SPSMLR Trigger: TCTAAGCATGGAAGGAGAGCAAGAAGGCTTGACCCA...GTAGACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTGGTTGCTTTTCAAAATaGGCCCGGGACAGAGCAACT | + |
Preference number: 4 (lower is better) Translates to: SESGFCGGFCGNLHKLHIGCFSK*ARDRAT Trigger: AGTTGCTCTGTCCCGGGCCCATTTTGAAAAGCAACC...AATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGGGTTGCTTTTCAAAATaGGCCCGGGACAGAGCAACT | + |
Preference number: 4 (lower is better) Translates to: SALVSKRVSLCSDCQCFMGCFSK*ARDRAT Trigger: AGTTGCTCTGTCCCGGGCCCATTTTGAAAAGCAACC...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR CCA 90 bp | CATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTCACTCCATACAAGCATaGTACCAAACACAACCTGGA | + |
Preference number: 4 (lower is better) Translates to: HPIGKPSKSRCISRTTHIHSIQA*YQTQPG Trigger: TCCAGGTTGTGTTTGGTACCATGCTTGTATGGAGTG...AATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGCCAATAGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCAGCCATAGTCTATGGTaGGTTCATTTAAGGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: CAGVYLSLVSVVDSVGICSHSLW*VHLRLC Trigger: ACACAGCCTTAAATGAACCCACCATAGACTATGGCT...GCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATGGAAGCCATAGTCTATaGTGGGTTCATTTAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: SPSSFSKVLWSFLPPCLNGSHSL*WVHLRL Trigger: CAGCCTTAAATGAACCCACCATAGACTATGGCTTCC...ATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGTGTGAGCTGGGGAGCTaGAAAGAGCTGGAATCTGGC | + |
Preference number: 4 (lower is better) Translates to: TSSECFLHNWSIGISSFVCELGS*KELESG Trigger: GCCAGATTCCAGCTCTTTCCAGCTCCCCAGCTCACA...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CTCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATTGCGGATGTATCCTTaGTTATTTCCTTGTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: LPKFFLQSSMELPASMPELRMYP*LFPCVD Trigger: GTCCACACAAGGAAATAACCAAGGATACATCCGCAA...TTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CAA 72 bp | AAAGCAGATCTGGGAATGGAGTGGTGGATTGAAGTGTaGGTGTGCTGGCGTTTATCTGAGTCTGGTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: KADLGMEWWIEV*VCWRLSESGFC Trigger: ACAGAAACCAGACTCAGATAAACGCCAGCACACCAACACTTCAATCCACCACTCCATTCCCAGATCTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTCTGGGTGCCTTGGGATaGCTTTCTGCAATCTTTGGA | + |
Preference number: 4 (lower is better) Translates to: HTHFQESTTVSNYCKVFPLGALG*LSAIFG Trigger: TCCAAAGATTGCAGAAAGTCATCCCAAGGCACCCAG...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GTCCTTGGTCAGTGTAGCCATGGGGCTTTGACTCTCCTTAGAGGTGAGATACTTTTTAAAATGATGTCCTaGTTATTGTGTGGTGTGCCG | + |
Preference number: 4 (lower is better) Translates to: VLGQCSHGALTLLRGEILFKMMS*LLCGVP Trigger: CGGCACACCACACAATAATCAGGACATCATTTTAAA...AAGTATCTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACACTGACCAAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCTTGTGCATGGGTTGAGGCACTCTTCTGTTTaGCAGCAGGAAAAACTGAAG | + |
Preference number: 4 (lower is better) Translates to: CGGFCGNLHKLHILVHGLRHSSV*QQEKLK Trigger: CTTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCT...CAACCCATGCACAAGAATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | GCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCGTCTTCTCATTGCCTTaGTCTTTGTCATTCTCCACA | + |
Preference number: 4 (lower is better) Translates to: ASQASLDASPGPHTFSRVVFSLP*SLSFST Trigger: TGTGGAGAATGACAAAGAGCAAGGCAATGAGAAGAC...GACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTGGTTGCTTTTCAAAATaGGCCCGGGACAGAGCAACT | + |
Preference number: 4 (lower is better) Translates to: HTHFQESTTVSNYCKVFPGCFSK*ARDRAT Trigger: AGTTGCTCTGTCCCGGGCCCATTTTGAAAAGCAACC...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TCCAGGACCACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGCACTCCATACAAGCATaGTACCAAACACAACCTGGA | + |
Preference number: 4 (lower is better) Translates to: SRTTHIFKSLPLLATTARHSIQA*YQTQPG Trigger: TCCAGGTTGTGTTTGGTACCATGCTTGTATGGAGTG...CCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTGGTCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | CACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTTTTCCCTGTCACCTGGGTGCCTTaGGATGACTTTCTGCAATCT | + |
Preference number: 4 (lower is better) Translates to: HTHFQESTTVSNYCKVFPVTWVP*DDFLQS Trigger: AGATTGCAGAAAGTCATCCCAAGGCACCCAGGTGAC...AGGGAAAACCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CAA 72 bp | CTTAGCACTGACCACGTCAATGACATTTCTCTGCTCTaGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTC | + |
Preference number: 4 (lower is better) Translates to: LSTDHVNDISLL*SPKGSVCVVTV Trigger: GACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGAGAAATGTCATTGACGTGGTCAGTGCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | GCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCGGATTTCCTCAAGTTTaGAGGAGGTTGCTTTTCAAA | + |
Preference number: 4 (lower is better) Translates to: ASQASLDASPGPHTFSRVGFPQV*RRLLFK Trigger: TTTGAAAAGCAACCTCCTTCAAACTTGAGGAAATCC...GACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCCCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATTGTTGGTCTTCTCATTaGCTTGCTCTTTGTCATTCT | + |
Preference number: 4 (lower is better) Translates to: SPSSFSKVLWSFLPPCLNCWSSH*LALCHS Trigger: AGAATGACAAAGAGCAAGGCAATGAGAAGACCAACA...ATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | AAGAGTCCAAGAAACACAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATGTGGGTCAAGCCTTCTTaGTCTCCTTCCATGCTTAGA | + |
Preference number: 4 (lower is better) Translates to: KSPRNTTKLPKFFLQSSMWVKPS*SPSMLR Trigger: TCTAAGCATGGAAGGAGAGCAAGAAGGCTTGACCCA...CATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTGTGTTTCTTGGACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | AGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGTAAGTGAGTACCATTGTTaGTCTTCTCATTGCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: SSFSKVLWSFLPPCLNRVSEYHC*SSHCLA Trigger: AGCAAGGCAATGAGAAGACCAACAATGGTACTCACT...TACTCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCTTGTGCATGGGTTGAGCCATAGTCTATGGTaGGTTCATTTAAGGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: CGGFCGNLHKLHILVHGLSHSLW*VHLRLC Trigger: ACACAGCCTTAAATGAACCCACCATAGACTATGGCT...CAACCCATGCACAAGAATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TTCAGGTTTCATTTTAAGAAAGTCTTCCATGCTGGTACCCTGTTTTGTTCAATTAGGAGAACGGGAGGATaGAGGACGTGCTGGAGGATC | + |
Preference number: 4 (lower is better) Translates to: FRFHFKKVFHAGTLFCSIRRTGG*RTCWRI Trigger: GATCCTCCAGCACGTCCTCCATCCTCCCGTTCTCCT...AATTGAACAAAACAGGGTACCAGCATGGAAGACTTTCTTAAAATGAAACCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TCCAGGACCACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGCAGCACGCTTTAAAATaGTGTCCTGATTATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: SRTTHIFKSLPLLATTARQHALK*CPDYCV Trigger: CACACAATAATCAGGACATCATTTTAAAGCGTGCTG...CCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTGGTCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | TCCAGGACCACACACATTTTCAAGAGTCTACCACTGTTAGCAACTACTGCAAGGTGTTGGTCTTCTCATTaGCTTGCTCTTTGTCATTCT | + |
Preference number: 4 (lower is better) Translates to: SRTTHIFKSLPLLATTARCWSSH*LALCHS Trigger: AGAATGACAAAGAGCAAGGCAATGAGAAGACCAACA...CCTTGCAGTAGTTGCTAACAGTGGTAGACTCTTGAAAATGTGTGTGGTCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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3UTR CAA 72 bp | CCAGGTCTAAACATGCTTAATTGTATTCTGCCTCCATaGTGGGATGGTAATGCTCGTATTCCACACGTTCTT | + |
Preference number: 4 (lower is better) Translates to: PGLNMLNCILPP*WDGNARIPHVL Trigger: AAGAACGTGTGGAATACGAGCATTACCATCCCACAATGGAGGCAGAATACAATTAAGCATGTTTAGACCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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CDS-3UTR GCA 90 bp | AAGAGTCCAAGAAACACAACCAAGCTCCCCAAGTTCTTTCTCCAAAGTTCTATGAGATGCTGCTTGTGTTaGGGATGTATCCTTGGTTAT | + |
Preference number: 4 (lower is better) Translates to: KSPRNTTKLPKFFLQSSMRCCLC*GCILGY Trigger: ATAACCAAGGATACATCCGCAACACAAGCAGCATCT...CATAGAACTTTGGAGAAAGAACTTGGGGAGCTTGGTTGTGTTTCTTGGACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGGGAAGCCATAGTCTATaGTGGGTTCATTTAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: TSSECFLHNWSIGISSFVGSHSL*WVHLRL Trigger: CAGCCTTAAATGAACCCACCATAGACTATGGCTTCC...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | GACCAGAATCATTTAATAGCAATGACTAAAGAGGACAGAGTGGCTTTGTTTTTACCACATTTACTGTTGTaGACAACACGACCTGGAACC | + |
Preference number: 4 (lower is better) Translates to: DQNHLIAMTKEDRVALFLPHLLL*TTRPGT Trigger: GGTTCCAGGTCGTGTTGTCCACAACAGTAAATGTGG...TAAAAACAAAGCCACTCTGTCCTCTTTAGTCATTGCTATTAAATGATTCTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TTCAGGTTTCATTTTAAGAAAGTCTTCCATGCTGGTACCCTGTTTTGTTCAATTGGAAGCCATAGTCTATaGTGGGTTCATTTAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: FRFHFKKVFHAGTLFCSIGSHSL*WVHLRL Trigger: CAGCCTTAAATGAACCCACCATAGACTATGGCTTCC...AATTGAACAAAACAGGGTACCAGCATGGAAGACTTTCTTAAAATGAAACCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CCA 90 bp | TTCAGGTTTCATTTTAAGAAAGTCTTCCATGCTGGTACCCTGTTTTGTTCAATTTTGCGGATGTATCCTTaGTTATTTCCTTGTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: FRFHFKKVFHAGTLFCSILRMYP*LFPCVD Trigger: GTCCACACAAGGAAATAACCAAGGATACATCCGCAA...AATTGAACAAAACAGGGTACCAGCATGGAAGACTTTCTTAAAATGAAACCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR TCA 90 bp | TTCAGGTTTCATTTTAAGAAAGTCTTCCATGCTGGTACCCTGTTTTGTTCAATTCAGCACGCTTTAAAATaGTGTCCTGATTATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: FRFHFKKVFHAGTLFCSIQHALK*CPDYCV Trigger: CACACAATAATCAGGACATCATTTTAAAGCGTGCTG...AATTGAACAAAACAGGGTACCAGCATGGAAGACTTTCTTAAAATGAAACCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS TCA 90 bp | CCGCGACATTGGCGTCCACCACGCCGACATTCCGGACCCAGGACCTaGCCGAATCCATCTCGGCACCCAGCGACTTGTCTTTCAGAGCTG | + |
Preference number: 5 (lower is better) Translates to: PRHWRPPRRHSGPRT*PNPSRHPATCLSEL Trigger: CAGCTCTGAAAGACAAGTCGCTGGGTGCCGAGATGGATTCGGTCAGGTCCTGGGTCCGGAATGTCGGCGTGGTGGACGCCAATGTCGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCCTGAATCCGTTCCCATaGCCGCTGGAGCAGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: HETKMAALCLPKSVQHGRLNPFP*PLEQAG Trigger: GCCTGCCTGCTCCAGCGGCAATGGGAACGGATTCAG...GCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS TCA 90 bp | GGATGGAGGACGTGCTGGAGGATCCCACGGTGGGGCTTGAAGACATaGTTCCATATGGGGAGCCCGTGGGTGAGCCATTCAGAAATCCCG | + |
Preference number: 5 (lower is better) Translates to: GWRTCWRIPRWGLKT*FHMGSPWVSHSEIP Trigger: CGGGATTTCTGAATGGCTCACCCACGGGCTCCCCATATGGAATCATGTCTTCAAGCCCCACCGTGGGATCCTCCAGCACGTCCTCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCGCGGGGAGATGCTGCTaGTGTTGCGGATGTATCCTT | + |
Preference number: 5 (lower is better) Translates to: SNMAAWGRNSPQQAQSASAGRCC*CCGCIL Trigger: AAGGATACATCCGCAACACAAGCAGCATCTCCCCGC...GGAAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
||
CDS-3UTR CAA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCCTGGCACACCCAGGTaGGCCATAGGAACATTGCTG | + |
Preference number: 5 (lower is better) Translates to: CPTWPLGGATLPNKLRVLPGTPR*AIGTLL Trigger: CAGCAATGTTCCTATGGCCAACCTGGGTGTGCCAGG...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCTGAATCCGTTCCCATaGCCGCTGGAGCAGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: EHETKMAALCLPKSVQHGLNPFP*PLEQAG Trigger: GCCTGCCTGCTCCAGCGGCAATGGGAACGGATTCAG...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGTCGGCACCCAGCGACTaGTCTTTCAGAGCTGGTCCT | + |
Preference number: 5 (lower is better) Translates to: GTRDQDGGSLPSQICPTWSAPSD*SFRAGP Trigger: AGGACCAGCTCTGAAAGACAAGTCGCTGGGTGCCGA...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTCTGCCCGGGGCTCCTTaGCAGAACTGTTTGGATTTA | + |
Preference number: 5 (lower is better) Translates to: CPTWPLGGATLPNKLRVLLPGAP*QNCLDL Trigger: TAAATCCAAACAGTTCTGCAAAGGAGCCCCGGGCAG...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGCTGCCCGGGGCTCCTTaGCAGAACTGTTTGGATTTA | + |
Preference number: 5 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQLPGAP*QNCLDL Trigger: TAAATCCAAACAGTTCTGCAAAGGAGCCCCGGGCAG...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCATCATTGCCTTGCTCTTaGTCATTCTCCACAAAGTCC | + |
Preference number: 5 (lower is better) Translates to: DGGSLPSQICPTWPLGGASLPCS*SFSTKS Trigger: GGACTTTGTGGAGAATGACAAAGAGCAAGGCAATGA...TGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS TCA 90 bp | GATGACAGGGGCAAAGGCACTCTTCTGTTTGACAGCAGGAAAAACTaGAGAGGAGAACGGGAGGATGGAGGACGTGCTGGAGGATCCCAC | + |
Preference number: 5 (lower is better) Translates to: DDRGKGTLLFDSRKN*RGEREDGGRAGGSH Trigger: GTGGGATCCTCCAGCACGTCCTCCATCCTCCCGTTCTCCTCTTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCTTTGCCCCTGTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS GCA 90 bp | ATTGCTGAGGCGTGGAGCTGGAGGAGTATCCCCGCGGGGAGATGCTaGTTGTGTTGCGGATGTATCCTTGGTTATTTCCTTGTGTGGACT | + |
Preference number: 5 (lower is better) Translates to: IAEAWSWRSIPAGRC*LCCGCILGYFLVWT Trigger: AGTCCACACAAGGAAATAACCAAGGATACATCCGCAACACAAGCAGCATCTCCCCGCGGGGATACTCCTCCAGCTCCACGCCTCAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCAAGGCACTCTTCTGTTaGACAGCAGGAAAAACTGAA | + |
Preference number: 5 (lower is better) Translates to: AALCLPKSVQHGRLGAQLKALFC*TAGKTE Trigger: TTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCTT...GAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CCAAATCTGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGTCATTGCCTTGCTCTTaGTCATTCTCCACAAAGTCC | + |
Preference number: 5 (lower is better) Translates to: PNLSNMAAWGRNSPQQAQSLPCS*SFSTKS Trigger: GGACTTTGTGGAGAATGACAAAGAGCAAGGCAATGA...CTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACAGATTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACCCTGGCACACCCAGGTaGGCCATAGGAACATTGCTG | + |
Preference number: 5 (lower is better) Translates to: HDILLASQASLDASPGPHPGTPR*AIGTLL Trigger: CAGCAATGTTCCTATGGCCAACCTGGGTGTGCCAGG...GTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GAAGTGTTGGTGTGCTGGCGTTTATCTGAGTCTGGTTTCTGTGGTGGATTCTGTTCGGCACCCAGCGACTaGTCTTTCAGAGCTGGTCCT | + |
Preference number: 5 (lower is better) Translates to: EVLVCWRLSESGFCGGFCSAPSD*SFRAGP Trigger: AGGACCAGCTCTGAAAGACAAGTCGCTGGGTGCCGA...ACAGAATCCACCACAGAAACCAGACTCAGATAAACGCCAGCACACCAACACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACCGCCTCATGTCCCTaGGGTTTCCCGCTGTTTTCA | + |
Preference number: 5 (lower is better) Translates to: HDILLASQASLDASPGPHTASCP*GFPLFS Trigger: TGAAAACAGCGGGAAACCCAAGGGACATGAGGCGGT...GTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCCATCCACATTTACTGTaGTGGACAACACGACCTGGA | + |
Preference number: 5 (lower is better) Translates to: EHETKMAALCLPKSVQHGHPHLL*WTTRPG Trigger: TCCAGGTCGTGTTGTCCACAACAGTAAATGTGGATG...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGCGAGATGCTGCTTGTGTaGCGGATGTATCCTTGGTTA | + |
Preference number: 5 (lower is better) Translates to: EHETKMAALCLPKSVQHGEMLLV*RMYPWL Trigger: TAACCAAGGATACATCCGCAACACAAGCAGCATCTC...GCCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GGAACACGAGACCAAGATGGCGGCTCTCTGCCTTCCCAAATCTGTCCAACATGGGAGATGCTGCTTGTGTaGCGGATGTATCCTTGGTTA | + |
Preference number: 5 (lower is better) Translates to: GTRDQDGGSLPSQICPTWEMLLV*RMYPWL Trigger: TAACCAAGGATACATCCGCAACACAAGCAGCATCTC...CCATGTTGGACAGATTTGGGAAGGCAGAGAGCCGCCATCTTGGTCTCGTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TGTCCAACATGGCCGCTTGGGGGCGCAACTCTCCCCAACAAGCTCAGAGTGCTTAAGGCACTCTTCTGTTaGACAGCAGGAAAAACTGAA | + |
Preference number: 5 (lower is better) Translates to: CPTWPLGGATLPNKLRVLKALFC*TAGKTE Trigger: TTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCTT...AAGCACTCTGAGCTTGTTGGGGAGAGTTGCGCCCCCAAGCGGCCATGTTGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCTGAATCCGTTCCCATaGCCGCTGGAGCAGGCAGGC | + |
Preference number: 5 (lower is better) Translates to: SESGFCGGFCGNLHKLHILNPFP*PLEQAG Trigger: GCCTGCCTGCTCCAGCGGCAATGGGAACGGATTCAG...AATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS TCA 90 bp | GCTTGTGTTGCGGATGTATCCTTGGTTATTTCCTTGTGTGGACTCTaGAATGCTGACGCCGAGCTGGCTGCCGTAAGAGTTGATACCCAT | + |
Preference number: 5 (lower is better) Translates to: ACVADVSLVISLCGL*NADAELAAVRVDTH Trigger: ATGGGTATCAACTCTTACGGCAGCCAGCTCGGCGTCAGCATTTCAGAGTCCACACAAGGAAATAACCAAGGATACATCCGCAACACAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS GCA 90 bp | TCTCACAGCATCGACTGCACATCACCTCGTGTGTCAGCAGAACTCTaGACATTTCGGGATTCTTATTCTGTCCCTCATAGGCTATGGGCT | + |
Preference number: 5 (lower is better) Translates to: SHSIDCTSPRVSAEL*TFRDSYSVPHRLWA Trigger: AGCCCATAGCCTATGAGGGACAGAATAAGAATCCCGAAATGTGCAGAGTTCTGCTGACACACGAGGTGATGTGCAGTCGATGCTGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGTCGGCACCCAGCGACTaGTCTTTCAGAGCTGGTCCT | + |
Preference number: 5 (lower is better) Translates to: SALVSKRVSLCSDCQCFMSAPSD*SFRAGP Trigger: AGGACCAGCTCTGAAAGACAAGTCGCTGGGTGCCGA...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CCAAGTTCTTTCTCCAAAGTTCTATGGAGCTTCCTGCCTCCATGCCTGAATCGAGGTGCTGTAATTAGATaGCTGAGGCGTGGAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: PSSFSKVLWSFLPPCLNRGAVIR*LRRGAG Trigger: TCCAGCTCCACGCCTCAGCAATCTAATTACAGCACC...TCGATTCAGGCATGGAGGCAGGAAGCTCCATAGAACTTTGGAGAAAGAACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CATGACATCCTATTGGCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACGGTCTTCTCATTGCCTaGCTCTTTGTCATTCTCCAC | + |
Preference number: 5 (lower is better) Translates to: HDILLASQASLDASPGPHGLLIA*LFVILH Trigger: GTGGAGAATGACAAAGAGCAAGGCAATGAGAAGACC...GTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGCCAATAGGATGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGACCGCCTCATGTCCCTaGGGTTTCCCGCTGTTTTCA | + |
Preference number: 5 (lower is better) Translates to: SALVSKRVSLCSDCQCFMTASCP*GFPLFS Trigger: TGAAAACAGCGGGAAACCCAAGGGACATGAGGCGGT...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GTCCTTGGTCAGTGTAGCCATGGGGCTTTGACTCTCCTTAGAGGTGAGATACTTCATCCACATTTACTGTaGTGGACAACACGACCTGGA | + |
Preference number: 5 (lower is better) Translates to: VLGQCSHGALTLLRGEILHPHLL*WTTRPG Trigger: TCCAGGTCGTGTTGTCCACAACAGTAAATGTGGATG...AAGTATCTCACCTCTAAGGAGAGTCAAAGCCCCATGGCTACACTGACCAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGGCGGGGAGATGCTGCTaGTGTTGCGGATGTATCCTT | + |
Preference number: 5 (lower is better) Translates to: SALVSKRVSLCSDCQCFMAGRCC*CCGCIL Trigger: AAGGATACATCCGCAACACAAGCAGCATCTCCCCGC...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | GCAAGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCGGTCTTCTCATTGCCTaGCTCTTTGTCATTCTCCAC | + |
Preference number: 5 (lower is better) Translates to: ASQASLDASPGPHTFSRVGLLIA*LFVILH Trigger: GTGGAGAATGACAAAGAGCAAGGCAATGAGAAGACC...GACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTCTGCCCGGGGCTCCTTaGCAGAACTGTTTGGATTTA | + |
Preference number: 5 (lower is better) Translates to: SESGFCGGFCGNLHKLHILPGAP*QNCLDL Trigger: TAAATCCAAACAGTTCTGCAAAGGAGCCCCGGGCAG...AATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGACCGCCTCATGTCCCTaGGGTTTCCCGCTGTTTTCA | + |
Preference number: 5 (lower is better) Translates to: TSSECFLHNWSIGISSFVTASCP*GFPLFS Trigger: TGAAAACAGCGGGAAACCCAAGGGACATGAGGCGGT...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | AGCCAAGCAAGTCTAGATGCATCTCCAGGACCACACACATTTTCAAGAGTCTACGAGATGCTGCTTGTGTaGCGGATGTATCCTTGGTTA | + |
Preference number: 5 (lower is better) Translates to: SQASLDASPGPHTFSRVYEMLLV*RMYPWL Trigger: TAACCAAGGATACATCCGCAACACAAGCAGCATCTC...GTAGACTCTTGAAAATGTGTGTGGTCCTGGAGATGCATCTAGACTTGCTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCTGCTCTTGTCTCCAAAAGGGTCAGTTTGTGTAGTGACTGTCAATGCTTCATGCATCCACATTTACTGTaGTGGACAACACGACCTGGA | + |
Preference number: 5 (lower is better) Translates to: SALVSKRVSLCSDCQCFMHPHLL*WTTRPG Trigger: TCCAGGTCGTGTTGTCCACAACAGTAAATGTGGATG...CATGAAGCATTGACAGTCACTACACAAACTGACCCTTTTGGAGACAAGAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGGGTGCTGTAATTAGATaGCTGAGGCGTGGAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: TSSECFLHNWSIGISSFVGAVIR*LRRGAG Trigger: TCCAGCTCCACGCCTCAGCAATCTAATTACAGCACC...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | ACAAGCTCAGAGTGCTTCCTTCATAATTGGTCCATCGGAATAAGTAGTTTTGTGGGTCTTCTCATTGCCTaGCTCTTTGTCATTCTCCAC | + |
Preference number: 5 (lower is better) Translates to: TSSECFLHNWSIGISSFVGLLIA*LFVILH Trigger: GTGGAGAATGACAAAGAGCAAGGCAATGAGAAGACC...CACAAAACTACTTATTCCGATGGACCAATTATGAAGGAAGCACTCTGAGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | CCAAGTGGCATAAAAATAACCTGGGACCAGAATCATTTAATAGCAATGACTAAAGCGGGGAGATGCTGCTaGTGTTGCGGATGTATCCTT | + |
Preference number: 5 (lower is better) Translates to: PSGIKITWDQNHLIAMTKAGRCC*CCGCIL Trigger: AAGGATACATCCGCAACACAAGCAGCATCTCCCCGC...TTTAGTCATTGCTATTAAATGATTCTGGTCCCAGGTTATTTTTATGCCACTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TCTGAGTCTGGTTTCTGTGGTGGATTCTGTGGGAATCTGCACAAGTTACACATTAAGGCACTCTTCTGTTaGACAGCAGGAAAAACTGAA | + |
Preference number: 5 (lower is better) Translates to: SESGFCGGFCGNLHKLHIKALFC*TAGKTE Trigger: TTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCTT...AATGTGTAACTTGTGCAGATTCCCACAGAATCCACCACAGAAACCAGACTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022637.14 ENSMUST00000176161.8 |
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CDS-3UTR CAA 90 bp | TTCAGGTTTCATTTTAAGAAAGTCTTCCATGCTGGTACCCTGTTTTGTTCAATTGGTGCTGTAATTAGATaGCTGAGGCGTGGAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: FRFHFKKVFHAGTLFCSIGAVIR*LRRGAG Trigger: TCCAGCTCCACGCCTCAGCAATCTAATTACAGCACC...AATTGAACAAAACAGGGTACCAGCATGGAAGACTTTCTTAAAATGAAACCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CCA 72 bp | CCCGGGACAGAGCAACTCCGCTCTGAGCCGCGACATTaGCGTCCACCACGCCGACATTCCGGACCCAGGACC | + |
Preference number: 6 (lower is better) Translates to: PGTEQLRSEPRH*RPPRRHSGPRT Trigger: GGTCCTGGGTCCGGAATGTCGGCGTGGTGGACGCCAATGTCGCGGCTCAGAGCGGAGTTGCTCTGTCCCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CCA 72 bp | GAATCCGTTCCCATTGCCGCTGGAGCAGGCAGGCGATaGGGAGCCTTGGGGCCTGATGACAGGGGCAAAGGC | + |
Preference number: 6 (lower is better) Translates to: ESVPIAAGAGRR*GALGPDDRGKG Trigger: GCCTTTGCCCCTGTCATCAGGCCCCAAGGCTCCCCATCGCCTGCCTGCTCCAGCGGCAATGGGAACGGATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS TCA 72 bp | TGGCGTCCACCACGCCGACATTCCGGACCCAGGACCTaGCCGAATCCATCTCGGCACCCAGCGACTTGTCTT | + |
Preference number: 6 (lower is better) Translates to: WRPPRRHSGPRT*PNPSRHPATCL Trigger: AAGACAAGTCGCTGGGTGCCGAGATGGATTCGGTCAGGTCCTGGGTCCGGAATGTCGGCGTGGTGGACGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CAA 72 bp | ACAACAAGTCCTGTCATGGCTCTGAATCCGTTCCCATaGCCGCTGGAGCAGGCAGGCGATGGGGAGCCTTGG | + |
Preference number: 6 (lower is better) Translates to: TTSPVMALNPFP*PLEQAGDGEPW Trigger: CCAAGGCTCCCCATCGCCTGCCTGCTCCAGCGGCAATGGGAACGGATTCAGAGCCATGACAGGACTTGTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS TCA 72 bp | ACGTGCTGGAGGATCCCACGGTGGGGCTTGAAGACATaGTTCCATATGGGGAGCCCGTGGGTGAGCCATTCA | + |
Preference number: 6 (lower is better) Translates to: TCWRIPRWGLKT*FHMGSPWVSHS Trigger: TGAATGGCTCACCCACGGGCTCCCCATATGGAATCATGTCTTCAAGCCCCACCGTGGGATCCTCCAGCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CAA 72 bp | GCCGTTCATGCTGTTGCTGGAGGTGCTGTAATTAGATaGCTGAGGCGTGGAGCTGGAGGAGTATCCCCGCGG | + |
Preference number: 6 (lower is better) Translates to: AVHAVAGGAVIR*LRRGAGGVSPR Trigger: CCGCGGGGATACTCCTCCAGCTCCACGCCTCAGCAATCTAATTACAGCACCTCCAGCAACAGCATGAACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS GCA 72 bp | GAGGCGTGGAGCTGGAGGAGTATCCCCGCGGGGAGATaGTGCTTGTGTTGCGGATGTATCCTTGGTTATTTC | + |
Preference number: 6 (lower is better) Translates to: EAWSWRSIPAGR*CLCCGCILGYF Trigger: GAAATAACCAAGGATACATCCGCAACACAAGCAGCATCTCCCCGCGGGGATACTCCTCCAGCTCCACGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CAA 90 bp | ATTGCTGTAGCCGTTCATGCTGTTGCTGGAGGTGCTGTAATTAGATaGCTGAGGCGTGGAGCTGGAGGAGTATCCCCGCGGGGAGATGCT | + |
Preference number: 6 (lower is better) Translates to: IAVAVHAVAGGAVIR*LRRGAGGVSPRGDA Trigger: AGCATCTCCCCGCGGGGATACTCCTCCAGCTCCACGCCTCAGCAATCTAATTACAGCACCTCCAGCAACAGCATGAACGGCTACAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS GCA 72 bp | TCCGGTTCCCGCAGCTCTTCTTCTCACAGCATCGACTaGACATCACCTCGTGTGTCAGCAGAACTCTGCACA | + |
Preference number: 6 (lower is better) Translates to: SGSRSSSSHSID*TSPRVSAELCT Trigger: TGTGCAGAGTTCTGCTGACACACGAGGTGATGTGCAGTCGATGCTGTGAGAAGAAGAGCTGCGGGAACCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS GCA 72 bp | GCGTGGAGCTGGAGGAGTATCCCCGCGGGGAGATGCTaGTTGTGTTGCGGATGTATCCTTGGTTATTTCCTT | + |
Preference number: 6 (lower is better) Translates to: AWSWRSIPAGRC*LCCGCILGYFL Trigger: AAGGAAATAACCAAGGATACATCCGCAACACAAGCAGCATCTCCCCGCGGGGATACTCCTCCAGCTCCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CCA 72 bp | GCCGTAAGAGTTGATACCCATCATACCGCTGTGAGCTaGGGAGCTGGAAAGAGCTGGAATCTGGCTGGGGTT | + |
Preference number: 6 (lower is better) Translates to: AVRVDTHHTAVS*GAGKSWNLAGV Trigger: AACCCCAGCCAGATTCCAGCTCTTTCCAGCTCCCCAGCTCACAGCGGTATGATGGGTATCAACTCTTACGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CAA 72 bp | CAGGACCTGACCGAATCCATCTCGGCACCCAGCGACTaGTCTTTCAGAGCTGGTCCTCTTCCTAGCGTATCT | + |
Preference number: 6 (lower is better) Translates to: QDLTESISAPSD*SFRAGPLPSVS Trigger: AGATACGCTAGGAAGAGGACCAGCTCTGAAAGACAAGTCGCTGGGTGCCGAGATGGATTCGGTCAGGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CAA 72 bp | CTGGAGGAGTATCCCCGCGGGGAGATGCTGCTTGTGTaGCGGATGTATCCTTGGTTATTTCCTTGTGTGGAC | + |
Preference number: 6 (lower is better) Translates to: LEEYPRGEMLLV*RMYPWLFPCVD Trigger: GTCCACACAAGGAAATAACCAAGGATACATCCGCAACACAAGCAGCATCTCCCCGCGGGGATACTCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS CAA 72 bp | TGGAGCTGGAGGAGTATCCCCGCGGGGAGATGCTGCTaGTGTTGCGGATGTATCCTTGGTTATTTCCTTGTG | + |
Preference number: 6 (lower is better) Translates to: WSWRSIPAGRCC*CCGCILGYFLV Trigger: CACAAGGAAATAACCAAGGATACATCCGCAACACAAGCAGCATCTCCCCGCGGGGATACTCCTCCAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS GCA 72 bp | TGGAGGAGTATCCCCGCGGGGAGATGCTGCTTGTGTTaGGGATGTATCCTTGGTTATTTCCTTGTGTGGACT | + |
Preference number: 6 (lower is better) Translates to: WRSIPAGRCCLC*GCILGYFLVWT Trigger: AGTCCACACAAGGAAATAACCAAGGATACATCCGCAACACAAGCAGCATCTCCCCGCGGGGATACTCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS TCA 72 bp | GCGGATGTATCCTTGGTTATTTCCTTGTGTGGACTCTaGAATGCTGACGCCGAGCTGGCTGCCGTAAGAGTT | + |
Preference number: 6 (lower is better) Translates to: ADVSLVISLCGL*NADAELAAVRV Trigger: AACTCTTACGGCAGCCAGCTCGGCGTCAGCATTTCAGAGTCCACACAAGGAAATAACCAAGGATACATCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |
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CDS GCA 72 bp | ATCGACTGCACATCACCTCGTGTGTCAGCAGAACTCTaGACATTTCGGGATTCTTATTCTGTCCCTCATAGG | + |
Preference number: 6 (lower is better) Translates to: IDCTSPRVSAEL*TFRDSYSVPHR Trigger: CCTATGAGGGACAGAATAAGAATCCCGAAATGTGCAGAGTTCTGCTGACACACGAGGTGATGTGCAGTCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022637.14 ENSMUST00000176029.2 ENSMUST00000176161.8 |