Pregenerated sensors for EBAG9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022339Ensembl transcript IDs: ENSMUST00000022964.9, ENSMUST00000226165.2, ENSMUST00000227691.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAATaGTTGCGTGTAGGCTGTGGGCCCAGACTCCTCCTCCTGGCACGC | + |
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Preference number: 1 (lower is better) Translates to: KQSVCILRILSSAYK*LRVGCGPRLLLLAR Trigger: GCGTGCCAGGAGGAGGAGTCTGGGCCCACAGCCTACACGCAAGCATTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR GCA 90 bp | CATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTaGATACAAATGCTTGCGTGTAGGCTGTGGGCCCAGACTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: HYDQAECLYSENTVQ*IQMLACRLWAQTPP Trigger: AGGAGGAGTCTGGGCCCACAGCCTACACGCAAGCATTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR CCA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAACTTGCGTGTAGGCTGTaGGCCCAGACTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ITIKQSVCILRILSSAYKLACRL*AQTPPP Trigger: AGGAGGAGGAGTCTGGGCCCACAGCCTACACGCAAG...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR CCA 90 bp | AATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTGCCTTGCGTGTAGGCTGTaGGCCCAGACTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NEREKLLILVLVTQSCHCLACRL*AQTPPP Trigger: AGGAGGAGGAGTCTGGGCCCACAGCCTACACGCAAG...GCAATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR CCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTCTTGCGTGTAGGCTGTaGGCCCAGACTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NKHITIKQSVCILRILSSLACRL*AQTPPP Trigger: AGGAGGAGGAGTCTGGGCCCACAGCCTACACGCAAG...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCAGGTATATTCCTCCTaGAATAACTTCTCTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: DGHCYHLDICNEREKLLIQVYSS*NNFSTA Trigger: TGCTGTAGAGAAGTTATTTCAGGAGGAATATACCTG...GATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR TCA 90 bp | AATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTGCCTAGAAACACTAGCTTaGGAGGTACTTGTCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: NEREKLLILVLVTQSCHCLETLA*EVLVRY Trigger: ATACCTGACAAGTACCTCTCAAGCTAGTGTTTCTAG...GCAATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR TCA 90 bp | AATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTGCAGAGTGTTTGTATTCTaGGAATACTGTCCAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: NEREKLLILVLVTQSCHCRVFVF*EYCPVH Trigger: ATGCACTGGACAGTATTCTCAGAATACAAACACTCT...GCAATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR GCA 72 bp | GTTTGTATTCTGAGAATACTGTCCAGTGCATACAAATaGTTGCGTGTAGGCTGTGGGCCCAGACTCCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VCILRILSSAYK*LRVGCGPRLLL Trigger: GAGGAGGAGTCTGGGCCCACAGCCTACACGCAAGCATTTGTATGCACTGGACAGTATTCTCAGAATACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR GCA 72 bp | CAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTaGATACAAATGCTTGCGTGTAGGCTGTGGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QAECLYSENTVQ*IQMLACRLWAQ Trigger: CTGGGCCCACAGCCTACACGCAAGCATTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATGCTAGAAACACTAGCTaGAGAGGTACTTGTCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CNEREKLLILVLVTQSCHARNTS*RGTCQV Trigger: TACCTGACAAGTACCTCTCAAGCTAGTGTTTCTAGC...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR TCA 72 bp | ATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTaGGAATACTGTCCAGTGCATACAAATGCTTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: INTLRSSRVFVF*EYCPVHTNACV Trigger: CACGCAAGCATTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR CAA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTACTCTACAGCAAACAATaGTCTTCTATTTGGAACACA | + |
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Preference number: 3 (lower is better) Translates to: GHCYHLDICNEREKLLILLYSKQ*SSIWNT Trigger: TGTGTTCCAAATAGAAGACAATTGTTTGCTGTAGAG...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR TCA 72 bp | ACTAGCTTGAGAGGTACTTGTCAGGTATATTCCTCCTaGAATAACTTCTCTACAGCAAACAATTGTCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TSLRGTCQVYSS*NNFSTANNCLL Trigger: TAGAAGACAATTGTTTGCTGTAGAGAAGTTATTTCAGGAGGAATATACCTGACAAGTACCTCTCAAGCTAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATCTCTACAGCAAACAATaGTCTTCTATTTGGAACACA | + |
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Preference number: 3 (lower is better) Translates to: CNEREKLLILVLVTQSCHLYSKQ*SSIWNT Trigger: TGTGTTCCAAATAGAAGACAATTGTTTGCTGTAGAG...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTACCTCAGCACCTCTTCTaGTTGCCAGGCTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHCYHLDICNEREKLLILPQHLF*LPGCIF Trigger: GAAGATGCAGCCTGGCAAGCAGAAGAGGTGCTGAGG...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | GATGGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCAGCACCTCTTCTGCTTaGCAGGCTGCATCTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DGHCYHLDICNEREKLLISTSSA*QAASSS Trigger: GGAAGAAGATGCAGCCTGGCAAGCAGAAGAGGTGCT...GATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTCCTCAGCACCTCTTCTaGTTGCCAGGCTGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSPQHLF*LPGCIF Trigger: GAAGATGCAGCCTGGCAAGCAGAAGAGGTGCTGAGG...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATCCTCAGCACCTCTTCTaGTTGCCAGGCTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNEREKLLILVLVTQSCHPQHLF*LPGCIF Trigger: GAAGATGCAGCCTGGCAAGCAGAAGAGGTGCTGAGG...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR TCA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTATCCAAAGAGTTCTGCTaGGTAGCCACATTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GHCYHLDICNEREKLLILSKEFC*VATFPF Trigger: GAATGGGAATGTGGCTACTCAGCAGAACTCTTTGGA...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAATTCTGCTTGCCAGGCTaGATCTTCTTCCTCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ITIKQSVCILRILSSAYKFCLPG*IFFLFP Trigger: TGGGAAGAGGAAGAAGATGCAGCCTGGCAAGCAGAA...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTAGCACCTCTTCTGCTTaGCAGGCTGCATCTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSSTSSA*QAASSS Trigger: GGAAGAAGATGCAGCCTGGCAAGCAGAAGAGGTGCT...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATAGCACCTCTTCTGCTTaGCAGGCTGCATCTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CNEREKLLILVLVTQSCHSTSSA*QAASSS Trigger: GGAAGAAGATGCAGCCTGGCAAGCAGAAGAGGTGCT...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTACTGTCTGCAATTTTCTaGTGCCTCAGCACCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GHCYHLDICNEREKLLILLSAIF*CLSTSS Trigger: AGAAGAGGTGCTGAGGCAGCAGAAAATTGCAGACAG...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAACCTCTGTTGTTCTGCTaGTCTCTTCTCTCTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ITIKQSVCILRILSSAYKPLLFC*SLLSVC Trigger: GCAGACAGAGAGAAGAGAGCAGCAGAACAACAGAGG...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | GATGGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCTTCTTCATCAGGCGCTaGGCTTCCTTCTCCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: DGHCYHLDICNEREKLLIFFIRR*ASFSIF Trigger: GAAAATGGAGAAGGAAGCGCAGCGCCTGATGAAGAA...GATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CCA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTAACCCGTGCTACCATCTaGGACACCAAAATTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: GHCYHLDICNEREKLLILTRATI*DTKIQW Trigger: CCATTGAATTTTGGTGTCCCAGATGGTAGCACGGGT...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTACTTTACACTTGTGGGTaGATCTTCATCCCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GHCYHLDICNEREKLLILLYTCG*IFIPGS Trigger: ACTTCCTGGGATGAAGATGCACCCACAAGTGTAAAG...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | GATGGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTTTACACTTGTGGGTaGATCTTCATCCCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: DGHCYHLDICNEREKLLILYTCG*IFIPGS Trigger: ACTTCCTGGGATGAAGATGCACCCACAAGTGTAAAG...GATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATCCTCTGTTGTTCTGCTaGTCTCTTCTCTCTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: CNEREKLLILVLVTQSCHPLLFC*SLLSVC Trigger: GCAGACAGAGAGAAGAGAGCAGCAGAACAACAGAGG...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTGCTTCTTCATCAGGCGCTaGGCTTCCTTCTCCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: NEREKLLILVLVTQSCHCFFIRR*ASFSIF Trigger: GAAAATGGAGAAGGAAGCGCAGCGCCTGATGAAGAA...GCAATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTGCACACCGATTTTGTTCTaGTCCTTCTTCATCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: NEREKLLILVLVTQSCHCTPILF*SFFIRR Trigger: GCGCCTGATGAAGAAGGAGCAGAACAAAATCGGTGT...GCAATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CCA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAAACCCGTGCTACCATCTaGGACACCAAAATTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: ITIKQSVCILRILSSAYKTRATI*DTKIQW Trigger: CCATTGAATTTTGGTGTCCCAGATGGTAGCACGGGT...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR TCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTTCCAAAGAGTTCTGCTaGGTAGCCACATTCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSSKEFC*VATFPF Trigger: GAATGGGAATGTGGCTACTCAGCAGAACTCTTTGGA...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR TCA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTCCAAAGAGTTCTGCTaGGTAGCCACATTCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: CNEREKLLILVLVTQSCHSKEFC*VATFPF Trigger: GAATGGGAATGTGGCTACTCAGCAGAACTCTTTGGA...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR TCA 90 bp | AATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTGCTTGGTGTCATGTCCTTaGAGTAGTCAGGTTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: NEREKLLILVLVTQSCHCLVSCP*SSQVPV Trigger: AACTGGAACCTGACTACTTCAAGGACATGACACCAA...GCAATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTACATGTCTTGTGTAGCTaGCAATCTACTGGAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: GHCYHLDICNEREKLLILHVLCS*QSTGKT Trigger: GGTTTTTCCAGTAGATTGGCAGCTACACAAGACATG...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTCTGTCTGCAATTTTCTaGTGCCTCAGCACCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSLSAIF*CLSTSS Trigger: AGAAGAGGTGCTGAGGCAGCAGAAAATTGCAGACAG...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTTTCTTCATCAGGCGCTaGGCTTCCTTCTCCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSFFIRR*ASFSIF Trigger: GAAAATGGAGAAGGAAGCGCAGCGCCTGATGAAGAA...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTACACCGATTTTGTTCTaGTCCTTCTTCATCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSTPILF*SFFIRR Trigger: GCGCCTGATGAAGAAGGAGCAGAACAAAATCGGTGT...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATACACCGATTTTGTTCTaGTCCTTCTTCATCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CNEREKLLILVLVTQSCHTPILF*SFFIRR Trigger: GCGCCTGATGAAGAAGGAGCAGAACAAAATCGGTGT...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTCGATCTTTACACTTGTaGGTGCATCTTCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSRSLHL*VHLHPR Trigger: CCTGGGATGAAGATGCACCCACAAGTGTAAAGATCG...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTACCCGTGCTACCATCTaGGACACCAAAATTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSTRATI*DTKIQW Trigger: CCATTGAATTTTGGTGTCCCAGATGGTAGCACGGGT...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR TCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTTTGGTGTCATGTCCTTaGAGTAGTCAGGTTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSLVSCP*SSQVPV Trigger: AACTGGAACCTGACTACTTCAAGGACATGACACCAA...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTCTTTACACTTGTGGGTaGATCTTCATCCCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: NKHITIKQSVCILRILSSLYTCG*IFIPGS Trigger: ACTTCCTGGGATGAAGATGCACCCACAAGTGTAAAG...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAACATGTCTTGTGTAGCTaGCAATCTACTGGAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: ITIKQSVCILRILSSAYKHVLCS*QSTGKT Trigger: GGTTTTTCCAGTAGATTGGCAGCTACACAAGACATG...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAACCTCTTCCCACGCATTaGTATTTTCTTGCCATGTAT | + |
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Preference number: 4 (lower is better) Translates to: ITIKQSVCILRILSSAYKPLPTH*YFLAMY Trigger: ATACATGGCAAGAAAATAGCAATGCGTGGGAAGAGG...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR GCA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATCCTCTTCCCACGCATTaGTATTTTCTTGCCATGTAT | + |
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Preference number: 4 (lower is better) Translates to: CNEREKLLILVLVTQSCHPLPTH*YFLAMY Trigger: ATACATGGCAAGAAAATAGCAATGCGTGGGAAGAGG...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | GATGGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCAGCACCTCTTCTGCTaGCCAGGCTGCATCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: DGHCYHLDICNEREKLLIQHLFC*PGCIFF Trigger: GAAGAAGATGCAGCCTGGCAAGCAGAAGAGGTGCTG...GATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAACAGCACCTCTTCTGCTaGCCAGGCTGCATCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ITIKQSVCILRILSSAYKQHLFC*PGCIFF Trigger: GAAGAAGATGCAGCCTGGCAAGCAGAAGAGGTGCTG...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTCAGCACCTCTTCTGCTaGCCAGGCTGCATCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: NKHITIKQSVCILRILSSQHLFC*PGCIFF Trigger: GAAGAAGATGCAGCCTGGCAAGCAGAAGAGGTGCTG...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTAGGAACGAGAACACTGTaGCTAGGCAGGTACAAACTT | + |
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Preference number: 5 (lower is better) Translates to: GHCYHLDICNEREKLLILGTRTL*LGRYKL Trigger: AAGTTTGTACCTGCCTAGCAACAGTGTTCTCGTTCC...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTACTTCGATCTTTACACTaGTGGGTGCATCTTCATCCC | + |
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Preference number: 5 (lower is better) Translates to: GHCYHLDICNEREKLLILLRSLH*WVHLHP Trigger: GGGATGAAGATGCACCCACAAGTGTAAAGATCGAAG...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTAGTAGTCAGGTTCCAGTaGTTCCAAAGAGTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GHCYHLDICNEREKLLILVVRFQ*FQRVLL Trigger: CAGCAGAACTCTTTGGAACAACTGGAACCTGACTAC...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAACTTCGATCTTTACACTaGTGGGTGCATCTTCATCCC | + |
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Preference number: 5 (lower is better) Translates to: ITIKQSVCILRILSSAYKLRSLH*WVHLHP Trigger: GGGATGAAGATGCACCCACAAGTGTAAAGATCGAAG...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTATCCTCTTCCCACGCATaGCTATTTTCTTGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: GHCYHLDICNEREKLLILSSSHA*LFSCHV Trigger: TACATGGCAAGAAAATAGCAATGCGTGGGAAGAGGA...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | GATGGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCAGCTTCACACCGATTTaGTTCTGCTCCTTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: DGHCYHLDICNEREKLLISFTPI*FCSFFI Trigger: GATGAAGAAGGAGCAGAACAAAATCGGTGTGAAGCT...GATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | GGACACTGTTACCATCTTGACATCTGTAATGAAAGAGAAAAGCTACTGATCCTAAGCTTCACACCGATTTaGTTCTGCTCCTTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: GHCYHLDICNEREKLLILSFTPI*FCSFFI Trigger: GATGAAGAAGGAGCAGAACAAAATCGGTGTGAAGCT...TAGGATCAGTAGCTTTTCTCTTTCATTACAGATGTCAAGATGGTAACAGTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGGAACGAGAACACTGTaGCTAGGCAGGTACAAACTT | + |
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Preference number: 5 (lower is better) Translates to: NKHITIKQSVCILRILSSGTRTL*LGRYKL Trigger: AAGTTTGTACCTGCCTAGCAACAGTGTTCTCGTTCC...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATGGAACGAGAACACTGTaGCTAGGCAGGTACAAACTT | + |
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Preference number: 5 (lower is better) Translates to: CNEREKLLILVLVTQSCHGTRTL*LGRYKL Trigger: AAGTTTGTACCTGCCTAGCAACAGTGTTCTCGTTCC...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGTAGTCAGGTTCCAGTaGTTCCAAAGAGTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: NKHITIKQSVCILRILSSVVRFQ*FQRVLL Trigger: CAGCAGAACTCTTTGGAACAACTGGAACCTGACTAC...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATGTAGTCAGGTTCCAGTaGTTCCAAAGAGTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CNEREKLLILVLVTQSCHVVRFQ*FQRVLL Trigger: CAGCAGAACTCTTTGGAACAACTGGAACCTGACTAC...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | ATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTGCATACAAAAGCTTCACACCGATTTaGTTCTGCTCCTTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: ITIKQSVCILRILSSAYKSFTPI*FCSFFI Trigger: GATGAAGAAGGAGCAGAACAAAATCGGTGTGAAGCT...TTTGTATGCACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | AATAAACACATTACGATCAAGCAGAGTGTTTGTATTCTGAGAATACTGTCCAGTTCCTCTTCCCACGCATaGCTATTTTCTTGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: NKHITIKQSVCILRILSSSSSHA*LFSCHV Trigger: TACATGGCAAGAAAATAGCAATGCGTGGGAAGAGGA...ACTGGACAGTATTCTCAGAATACAAACACTCTGCTTGATCGTAATGTGTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022964.9 ENSMUST00000226165.2 ENSMUST00000227691.2 |
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| CDS-3UTR CAA 90 bp | TGTAATGAAAGAGAAAAGCTACTGATCCTAGTTCTTGTCACACAAAGTTGTCATTCCTCTTCCCACGCATaGCTATTTTCTTGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: CNEREKLLILVLVTQSCHSSSHA*LFSCHV Trigger: TACATGGCAAGAAAATAGCAATGCGTGGGAAGAGGA...ATGACAACTTTGTGTGACAAGAACTAGGATCAGTAGCTTTTCTCTTTCATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226165.2 ENSMUST00000227691.2 |
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