Pregenerated sensors for EARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030871Ensembl transcript IDs: ENSMUST00000033159.4
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGATGAGAGTAGTCAGAGTGCTTGTTTCTACAGCTGTTCATCCTaGAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: ADESSQSACFYSCSS*KGPNRLQVSCSPQN Trigger: ATTCTGAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAGCACTCTGACTACTCTCATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| 3UTR CCA 90 bp | CCAATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATaGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTATGCATCTTC | + |
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Preference number: 1 (lower is better) Translates to: PIGSRFPALLRIQFP*LEALMVISMVLCIF Trigger: GAAGATGCATAGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| 3UTR TCA 72 bp | ACACAAGTTCAAGCTCATTATTCCCAGAGTCAACAGTaGAACAGCTGGGGTCCCCGAAGGCCAGCTGATGAG | + |
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Preference number: 3 (lower is better) Translates to: TQVQAHYSQSQQ*NSWGPRRPADE Trigger: CTCATCAGCTGGCCTTCGGGGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGAACTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| 3UTR CCA 72 bp | TCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATaGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: SRFPALLRIQFP*LEALMVISMVL Trigger: TAGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | CTTGTTTCTACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTCCGAGGGCCACCACGTaGGGCTCGGCCAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LVSTAVHPERVPIGSRFPPRATT*GSASRS Trigger: GCTTCTGCTGGCCGAGCCGCACGTGGTGGCCCTCGG...AGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | CTTGTTTCTACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTCTGACAGTAGGGCCCTaGAGGACCACCCCGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LVSTAVHPERVPIGSRFPLTVGP*RTTPAG Trigger: CCCCGCCGGGGTGGTCCTGCAGGGCCCTACTGTCAG...AGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | AATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCCGGAGGCCACCCAGGTaGAGGAAGCCTGTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NRLQVSCSPQNSVSMVRGRRPPR*RKPVGL Trigger: CAGCCCCACAGGCTTCCTGCACCTGGGTGGCCTCCG...GCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | CCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGGGAAGCCTGTGGGGCTaGGAGCGAAGCGCACTCGCA | + |
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Preference number: 4 (lower is better) Translates to: PALLRIQFPWLEALMVISGSLWG*ERSALA Trigger: TGCGAGTGCGCTTCGCTCCCAGCCCCACAGGCTTCC...CGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | AGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTGGTGCAGGAAGCCTGTaGGGCTGGGAGCGAAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RLQVSCSPQNSVSMVRGSGAGSL*GWERSA Trigger: TGCGCTTCGCTCCCAGCCCCACAGGCTTCCTGCACC...AGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | TCAAGCTCATTATTCCCAGAGTCAACAGTGAAACAGCTGGGGTCCCCGAAGGCCGCTTTCTGCTGCCCCTaGCACCAAGCGGCTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: SSSLFPESTVKQLGSPKAAFCCP*HQAALI Trigger: GATCAGAGCCGCTTGGTGCCAGGGGCAGCAGAAAGC...GGCCTTCGGGGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | CCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGTGGGCCACCTGTGCCTaGCTCAGGTTCCGGCACCGA | + |
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Preference number: 4 (lower is better) Translates to: PALLRIQFPWLEALMVISWATCA*LRFRHR Trigger: TCGGTGCCGGAACCTGAGCCAGGCACAGGTGGCCCA...CGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | TCAAGCTCATTATTCCCAGAGTCAACAGTGAAACAGCTGGGGTCCCCGAAGGCCGGTCCCCCTCCACACTaGCCACTTCATGCTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SSSLFPESTVKQLGSPKAGPPPH*PLHAES Trigger: GGACTCAGCATGAAGTGGCCAGTGTGGAGGGGGACC...GGCCTTCGGGGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | TCAAGCTCATTATTCCCAGAGTCAACAGTGAAACAGCTGGGGTCCCCGAAGGCCGAGCCCCGCAGCACATaGCTGATGCTCATGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSSLFPESTVKQLGSPKAEPRST*LMLMWW Trigger: CCACCACATGAGCATCAGCCATGTGCTGCGGGGCTC...GGCCTTCGGGGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | TCAAGCTCATTATTCCCAGAGTCAACAGTGAAACAGCTGGGGTCCCCGAAGGCCATGAGCAAATCGAGGTaGCTGCCAGCCCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSSLFPESTVKQLGSPKAMSKSR*LPAQGL Trigger: CAGGCCCTGGGCTGGCAGCCACCTCGATTTGCTCAT...GGCCTTCGGGGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | GGCCAGCTGATGAGAGTAGTCAGAGTGCTTGTTTCTACAGCTGTTCATCCTGAAGCCACAGGGGGTCCTTaGAGCTGTCCACTGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GQLMRVVRVLVSTAVHPEATGGP*SCPLRA Trigger: GGCCCTCAGTGGACAGCTGCAAGGACCCCCTGTGGC...TTCAGGATGAACAGCTGTAGAAACAAGCACTCTGACTACTCTCATCAGCTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATCCAGCAGGGCTGAGTaGCAGGTGATCCGCGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ERVPIGSRFPALLRIQFPSSRAE*QVIRVR Trigger: CCTGACGCGGATCACCTGCCACTCAGCCCTGCTGGA...TGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR TCA 90 bp | AGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTAGGAGCAGGGGCAGATaGGCAAATCGAGGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLQVSCSPQNSVSMVRGSRSRGR*ANRGGC Trigger: GCAGCCACCTCGATTTGCTCATCTGCCCCTGCTCCT...AGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTCTTCTGGGCCACCTGTaGCTGGCTCAGGTTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PQNSVSMVRGSHGHLDGALLGHL*LAQVPA Trigger: TGCCGGAACCTGAGCCAGGCACAGGTGGCCCAGAAG...AGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCAGGGTCCTGCCCATTTaGTTCTCTGCAAACCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: TAVHPERVPIGSRFPALLRVLPI*FSANPE Trigger: CTCGGGGTTTGCAGAGAACCAAATGGGCAGGACCCT...GAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | CCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGACCAACTGGGGCCTCTaGGTCTCACTGCTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PALLRIQFPWLEALMVISTNWGL*VSLLTS Trigger: GCTGGTGAGCAGTGAGACCCAGAGGCCCCAGTTGGT...CGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR TCA 90 bp | CCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGCCCGCAGCACATGGCTaGTGCTCATGTGGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PALLRIQFPWLEALMVISPAAHG*CSCGGH Trigger: ATGACCACCACATGAGCATCAGCCATGTGCTGCGGG...CGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR TCA 90 bp | AATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCGATCCTGCAGGCGGCTaGTGTGACCCTGTCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NRLQVSCSPQNSVSMVRGDPAGG*CDPVSA Trigger: TGCTGAGACAGGGTCACATCAGCCGCCTGCAGGATC...GCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | CCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGGCTCCGGCAGGGTCCTaGCCATTTGGTTCTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: PALLRIQFPWLEALMVISAPAGS*PFGSLQ Trigger: TTGCAGAGAACCAAATGGGCAGGACCCTGCCGGAGC...CGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | CCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTGGGACTCTCATCAGGTaGGATGCCTGCCCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PQNSVSMVRGSHGHLDGAGTLIR*DACPLQ Trigger: CTGGAGTGGGCAGGCATCCCACCTGATGAGAGTCCC...AGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | AATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCGCAGGTGCTTGGAGGTaGAGACTAGCCACTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NRLQVSCSPQNSVSMVRGAGAWR*RLATRS Trigger: GCTCCGAGTGGCTAGTCTCCACCTCCAAGCACCTGC...GCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | ACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCGCCCCAGCAAGCGCTTaGCAATCACATCCACGTTTT | + |
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Preference number: 4 (lower is better) Translates to: TAVHPERVPIGSRFPALLAPASA*QSHPRF Trigger: AAAACGTGGATGTGATTGCCAAGCGCTTGCTGGGGC...GAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | TCAAGCTCATTATTCCCAGAGTCAACAGTGAAACAGCTGGGGTCCCCGAAGGCCTCACACTGCTATGCTTaGCGCCTTCCAGACCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSSLFPESTVKQLGSPKASHCYA*RLPDLL Trigger: CAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGA...GGCCTTCGGGGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR TCA 90 bp | CCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGCTGGCCACTTCATGCTaGGTCCAGCCATATACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PALLRIQFPWLEALMVISLATSC*VQPYTR Trigger: CCTGGTATATGGCTGGACTCAGCATGAAGTGGCCAG...CGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR TCA 90 bp | AATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTATGCATGCTGGCACCCAGTTCTaGTCGATGGACAGCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: NSVSMVRGSHGHLDGAMHAGTQF*SMDSRA Trigger: CGCCCTGCTGTCCATCGATCAGAACTGGGTGCCAGC...ATGCATAGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | AATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCACCAGCCGGCGGAGGTaGAGCCTGTTAAATTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NRLQVSCSPQNSVSMVRGTSRRR*SLLNSG Trigger: CCCAGAATTTAACAGGCTGCACCTCCGCCGGCTGGT...GCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | AATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCCCAGCATGTCCTCAATaGTTTCTGCTGCCCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NRLQVSCSPQNSVSMVRGPACPQ*FLLPLA Trigger: TGCCAGGGGCAGCAGAAAGCATTGAGGACATGCTGG...GCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | TCAAGCTCATTATTCCCAGAGTCAACAGTGAAACAGCTGGGGTCCCCGAAGGCCCTAGAAAGCACCTTCTaGATTCGTTCCCGTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: SSSLFPESTVKQLGSPKALESTF*IRSRTS Trigger: GGAAGTACGGGAACGAATCCAGAAGGTGCTTTCTAG...GGCCTTCGGGGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR TCA 90 bp | AATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTATGCATTGCTACCATCCCTGTTaGGGAGCAGGGGCAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: NSVSMVRGSHGHLDGAMHCYHPC*GAGADE Trigger: CTCATCTGCCCCTGCTCCTCAACAGGGATGGTAGCA...ATGCATAGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR TCA 90 bp | CCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTGCCTTCCAGACCTTCTaGCAGCTTCTTCAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PQNSVSMVRGSHGHLDGAAFQTF*QLLQLS Trigger: AGAGAGCTGAAGAAGCTGTCAGAAGGTCTGGAAGGC...AGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | GTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTTTCATCACACTGCTATaGTTGGCGCCTTCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: VHPERVPIGSRFPALLRIFITLL*LAPSRP Trigger: AGGTCTGGAAGGCGCCAAGCATAGCAGTGTGATGAA...AATTCTGAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTGGAGCTTCATCACACTaGTATGCTTGGCGCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PQNSVSMVRGSHGHLDGAGASSH*YAWRLP Trigger: TGGAAGGCGCCAAGCATAGCAGTGTGATGAAGCTCC...AGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCAAAGCTCCAGCCGCTGTaGCAAACAGAAACAGGGATA | + |
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Preference number: 4 (lower is better) Translates to: ERVPIGSRFPALLRIQFPKLQPL*QTETGI Trigger: TATCCCTGTTTCTGTTTGCCACAGCGGCTGGAGCTT...TGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | CCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTACTTTTCAGGATAACTaGGTCCCCCTCCACACTGGC | + |
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Preference number: 4 (lower is better) Translates to: PQNSVSMVRGSHGHLDGATFQDN*VPLHTG Trigger: GCCAGTGTGGAGGGGGACCCAGTTATCCTGAAAAGT...AGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | GTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCAGAATTTGGCTGATGCTCATGTaGTGGTCATCTACCACACAG | + |
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Preference number: 4 (lower is better) Translates to: VHPERVPIGSRFPALLRIWLMLM*WSSTTQ Trigger: CTGTGTGGTAGATGACCACCACATGAGCATCAGCCA...AATTCTGAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | GGCCAGCTGATGAGAGTAGTCAGAGTGCTTGTTTCTACAGCTGTTCATCCTGAACTGGCAGAAAACCGGTaGCAGCAAAATGTTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQLMRVVRVLVSTAVHPELAENR*QQNVPG Trigger: TCCTGGAACATTTTGCTGCCACCGGTTTTCTGCCAG...TTCAGGATGAACAGCTGTAGAAACAAGCACTCTGACTACTCTCATCAGCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR GCA 90 bp | AATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTATGCATCTGTCGGCTCCTCAGTaGTTCCTTCTTCAGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NSVSMVRGSHGHLDGAMHLSAPQ*FLLQKL Trigger: GAGCTTCTGAAGAAGGAAGCACTGAGGAGCCGACAG...ATGCATAGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | CTTGTTTCTACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTAGAATGAAGCTCCCTTaGTGCTTCTTGGCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: LVSTAVHPERVPIGSRFPRMKLP*CFLAKM Trigger: CATCTTTGCCAAGAAGCACCAAGGGAGCTTCATTCT...AGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS-3UTR CCA 90 bp | CCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATGGTGCTTCCCTTGGTGCTTCTTaGCAAAGATGTAGTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: PQNSVSMVRGSHGHLDGASLGAS*QRCSCR Trigger: TCTACAACTACATCTTTGCCAAGAAGCACCAAGGGA...AGCACCATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS GCA 90 bp | GCCCCGGGATCTGGGCCCAGACTGGCCTCGCGCCGCCCCACGCGGTaGCCGAGGGCCACCACGTGCGGCTCGGCCAGCAGAAGCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: APGSGPRLASRRPTR*PRATTCGSASRSLL Trigger: CAAGAGGCTTCTGCTGGCCGAGCCGCACGTGGTGGCCCTCGGGCACCGCGTGGGGCGGCGCGAGGCCAGTCTGGGCCCAGATCCCGGGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS GCA 90 bp | GGCTTGGGCATACAGAGCCAGCCGCTGGGACTGACAGTAGGGCCCTaGAGGACCACCCCGGCGGGGACTCTCATCAGGTGGGATGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GLGIQSQPLGLTVGP*RTTPAGTLIRWDAC Trigger: GCAGGCATCCCACCTGATGAGAGTCCCCGCCGGGGTGGTCCTGCAGGGCCCTACTGTCAGTCCCAGCGGCTGGCTCTGTATGCCCAAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS CCA 90 bp | CTCCCGAATGCCTCCTTCACCAGGCCCTGCAATTTCTCCACCAACTaGGGCCTCTGGGTCTCACTGCTCACCAGCCGGCGGAGGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LPNASFTRPCNFSTN*GLWVSLLTSRRRCS Trigger: GCTGCACCTCCGCCGGCTGGTGAGCAGTGAGACCCAGAGGCCCCAGTTGGTGGAGAAATTGCAGGGCCTGGTGAAGGAGGCATTCGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS GCA 90 bp | AGGTGGGATGCCTGCCCACTCCAGCATGTCCTCAATGCTTTCTGCTaGCCCTGGCACCAAGCGGCTCTGATCGGTGTCCTCCAGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RWDACPLQHVLNAFC*PWHQAALIGVLQPQ Trigger: CTGAGGCTGGAGGACACCGATCAGAGCCGCTTGGTGCCAGGGGCAGCAGAAAGCATTGAGGACATGCTGGAGTGGGCAGGCATCCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS GCA 90 bp | ATCAGGTGGGATGCCTGCCCACTCCAGCATGTCCTCAATGCTTTCTaGTGCCCCTGGCACCAAGCGGCTCTGATCGGTGTCCTCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IRWDACPLQHVLNAF*CPWHQAALIGVLQP Trigger: AGGCTGGAGGACACCGATCAGAGCCGCTTGGTGCCAGGGGCAGCAGAAAGCATTGAGGACATGCTGGAGTGGGCAGGCATCCCACCTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 90 bp | GCCTCCTTCACCAGGCCCTGCAATTTCTCCACCAACTGGGGCCTCTaGGTCTCACTGCTCACCAGCCGGCGGAGGTGCAGCCTGTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASFTRPCNFSTNWGL*VSLLTSRRRCSLLN Trigger: ATTTAACAGGCTGCACCTCCGCCGGCTGGTGAGCAGTGAGACCCAGAGGCCCCAGTTGGTGGAGAAATTGCAGGGCCTGGTGAAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 90 bp | GCTTGGAGGTGGAGACTAGCCACTCGGAGCCCCGCAGCACATGGCTaGTGCTCATGTGGTGGTCATCTACCACACAGGCTAGGTGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWRWRLATRSPAAHG*CSCGGHLPHRLGGR Trigger: CCTACCACCTAGCCTGTGTGGTAGATGACCACCACATGAGCATCAGCCATGTGCTGCGGGGCTCCGAGTGGCTAGTCTCCACCTCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 90 bp | AGGACACCATCATCTCAGCCACAGGGGGTCCTTGCAGCTGTCCACTaGGGGCCATCCGGAGGAGCTTCATCACACTGCTATGCTTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RTPSSQPQGVLAAVH*GPSGGASSHCYAWR Trigger: GCGCCAAGCATAGCAGTGTGATGAAGCTCCTCCGGATGGCCCTCAGTGGACAGCTGCAAGGACCCCCTGTGGCTGAGATGATGGTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS GCA 90 bp | GACTCTCATCAGGTGGGATGCCTGCCCACTCCAGCATGTCCTCAATaGTTTCTGCTGCCCCTGGCACCAAGCGGCTCTGATCGGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSHQVGCLPTPACPQ*FLLPLAPSGSDRCP Trigger: AGGACACCGATCAGAGCCGCTTGGTGCCAGGGGCAGCAGAAAGCATTGAGGACATGCTGGAGTGGGCAGGCATCCCACCTGATGAGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 90 bp | AGGTGCTTGGAGGTGGAGACTAGCCACTCGGAGCCCCGCAGCACATaGCTGATGCTCATGTGGTGGTCATCTACCACACAGGCTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RCLEVETSHSEPRST*LMLMWWSSTTQARW Trigger: CCACCTAGCCTGTGTGGTAGATGACCACCACATGAGCATCAGCCATGTGCTGCGGGGCTCCGAGTGGCTAGTCTCCACCTCCAAGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 90 bp | AACAGAAACAGGGATAGGCAGCTCCAGATCTCAGCAAGGCTTCCGTaGCTTGGGCATACAGAGCCAGCCGCTGGGACTGACAGTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NRNRDRQLQISARLP*LGHTEPAAGTDSRA Trigger: GGCCCTACTGTCAGTCCCAGCGGCTGGCTCTGTATGCCCAAGCCACGGAAGCCTTGCTGAGATCTGGAGCTGCCTATCCCTGTTTCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 90 bp | AGCATGTCCTCAATGCTTTCTGCTGCCCCTGGCACCAAGCGGCTCTaGTCGGTGTCCTCCAGCCTCAGAATGAAGCTCCCTTGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMSSMLSAAPGTKRL*SVSSSLRMKLPWCF Trigger: GAAGCACCAAGGGAGCTTCATTCTGAGGCTGGAGGACACCGATCAGAGCCGCTTGGTGCCAGGGGCAGCAGAAAGCATTGAGGACATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 90 bp | CCCCTGGCACCAAGCGGCTCTGATCGGTGTCCTCCAGCCTCAGAATaGAGCTCCCTTGGTGCTTCTTGGCAAAGATGTAGTTGTAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLAPSGSDRCPPASE*SSLGASWQRCSCRG Trigger: CCCTCTACAACTACATCTTTGCCAAGAAGCACCAAGGGAGCTTCATTCTGAGGCTGGAGGACACCGATCAGAGCCGCTTGGTGCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 90 bp | CTTTTCAGGATAACTGGGTCCCCCTCCACACTGGCCACTTCATGCTaGGTCCAGCCATATACCAGGTCCTGGAAGGCTGGTACTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFRITGSPSTLATSC*VQPYTRSWKAGTAS Trigger: GGAGGCAGTACCAGCCTTCCAGGACCTGGTATATGGCTGGACTCAGCATGAAGTGGCCAGTGTGGAGGGGGACCCAGTTATCCTGAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS GCA 90 bp | AGCTGTCCACTGAGGGCCATCCGGAGGAGCTTCATCACACTGCTATaGTTGGCGCCTTCCAGACCTTCTGACAGCTTCTTCAGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCPLRAIRRSFITLL*LAPSRPSDSFFSSL Trigger: CAGAGAGCTGAAGAAGCTGTCAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGATGAAGCTCCTCCGGATGGCCCTCAGTGGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 90 bp | AAAGCCCCAGCAAGCGCTTGGCAATCACATCCACGTTTTCCGAGCTaGCACCCAGTTCTGATCGATGGACAGCAGGGCGGGTCCATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAPASAWQSHPRFPS*HPVLIDGQQGGSIS Trigger: ACTTATGGACCCGCCCTGCTGTCCATCGATCAGAACTGGGTGCCAGCTCGGAAAACGTGGATGTGATTGCCAAGCGCTTGCTGGGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | AGGCTCCAGGTTTCCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTAGCCACAGGGGGTCCTaGCAGCTGTCCACTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQVSCSPQNSVSMVRGSSHRGS*QLSTEG Trigger: GCCCTCAGTGGACAGCTGCAAGGACCCCCTGTGGCT...AGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCCAGGGTCCTGCCCATTaGGTTCTCTGCAAACCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TAVHPERVPIGSRFPALLQGPAH*VLCKPR Trigger: TCGGGGTTTGCAGAGAACCAAATGGGCAGGACCCTG...GAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 90 bp | TCCAGACCTTCTGACAGCTTCTTCAGCTCTCTGTTCAGCACATCCTaGGTTAGGCTTAAGCCAGGTCTTTCTAAAAGCCCCAGCAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRPSDSFFSSLFSTS*VRLKPGLSKSPSKR Trigger: GCGCTTGCTGGGGCTTTTAGAAAGACCTGGCTTAAGCCTAACTCAGGATGTGCTGAACAGAGAGCTGAAGAAGCTGTCAGAAGGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS GCA 90 bp | AGGAGGATCCTCTCCATATATGCAGGGTCCAGAACATCCTTGTTTTaGAGTTCACTCCCGAATGCCTCCTTCACCAGGCCCTGCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRILSIYAGSRTSLF*SSLPNASFTRPCNF Trigger: GAAATTGCAGGGCCTGGTGAAGGAGGCATTCGGGAGTGAACTGCAAAACAAGGATGTTCTGGACCCTGCATATATGGAGAGGATCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCCAGAATGAAGCTCCCTaGGTGCTTCTTGGCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAVHPERVPIGSRFPALLQNEAP*VLLGKD Trigger: ATCTTTGCCAAGAAGCACCAAGGGAGCTTCATTCTG...GAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGCTCTCCTCCAGAACATCCTTGTTTaGCAGTTCACTCCCGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: TAVHPERVPIGSRFPALLQNILV*QFTPEC Trigger: GCATTCGGGAGTGAACTGCAAAACAAGGATGTTCTG...GAGGAGAGCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTTTCTACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTAGCCCCAGCAAGCGCTaGGCAATCACATCCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVSTAVHPERVPIGSRFPSPSKR*AITSTF Trigger: AAACGTGGATGTGATTGCCAAGCGCTTGCTGGGGCT...AGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | CCTGCTCTCCTCAGAATTCAGTTTCCATGGTTAGAGGCTCTCATGGTCATCTCGATCACACTGCTATGCTaGGCGCCTTCCAGACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PALLRIQFPWLEALMVISITLLC*APSRPS Trigger: AGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGAT...CGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | GGCCAGCTGATGAGAGTAGTCAGAGTGCTTGTTTCTACAGCTGTTCATCCTGAAGTTCCCGTACTTCCTTaGGGCCCAAGGACACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GQLMRVVRVLVSTAVHPEVPVLP*GPRTPS Trigger: TGATGGTGTCCTTGGGCCCAAAGGAAGTACGGGAAC...TTCAGGATGAACAGCTGTAGAAACAAGCACTCTGACTACTCTCATCAGCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTTTCTACAGCTGTTCATCCTGAAAGGGTCCCAATAGGCTCCAGGTTTCCTGGGTCCAGAACATCCTaGTTTTGCAGTTCACTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LVSTAVHPERVPIGSRFPGSRTS*FCSSLP Trigger: CGGGAGTGAACTGCAAAACAAGGATGTTCTGGACCC...AGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | AGAGTAGTCAGAGTGCTTGTTTCTACAGCTGTTCATCCTGAAAGGGTCCCAATATGCCTCTTAGACAGCTaGCTACCATCCCTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVVRVLVSTAVHPERVPICLLDS*LPSLLR Trigger: CCTCAACAGGGATGGTAGCAAGCTGTCTAAGAGGCA...TATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAGCACTCTGACTACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS-3UTR CAA 90 bp | AGAGTAGTCAGAGTGCTTGTTTCTACAGCTGTTCATCCTGAAAGGGTCCCAATAAACCCCGAGCCACAGTaGGTGATGATGTCAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVVRVLVSTAVHPERVPINPEPQ*VMMSSK Trigger: CTTGCTTGACATCATCACCAACTGTGGCTCGGGGTT...TATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAGCACTCTGACTACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS GCA 72 bp | TCTGGGCCCAGACTGGCCTCGCGCCGCCCCACGCGGTaGCCGAGGGCCACCACGTGCGGCTCGGCCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGPRLASRRPTR*PRATTCGSASR Trigger: TCTGCTGGCCGAGCCGCACGTGGTGGCCCTCGGGCACCGCGTGGGGCGGCGCGAGGCCAGTCTGGGCCCAGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS CCA 72 bp | AGCCCAGGGCCTGGTAGAGGAGCAGGTGCTTGGAGGTaGAGACTAGCCACTCGGAGCCCCGCAGCACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPGPGRGAGAWR*RLATRSPAAHG Trigger: GCCATGTGCTGCGGGGCTCCGAGTGGCTAGTCTCCACCTCCAAGCACCTGCTCCTCTACCAGGCCCTGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS CCA 72 bp | ACCAGGCCCTGCAATTTCTCCACCAACTGGGGCCTCTaGGTCTCACTGCTCACCAGCCGGCGGAGGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRPCNFSTNWGL*VSLLTSRRRCS Trigger: GCTGCACCTCCGCCGGCTGGTGAGCAGTGAGACCCAGAGGCCCCAGTTGGTGGAGAAATTGCAGGGCCTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS CAA 72 bp | TGGGCCACCTGTGCCTGGCTCAGGTTCCGGCACCGATaGTCATACCGGGGTGTCTGTCGGCTCCTCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WATCAWLRFRHR*SYRGVCRLLSA Trigger: AGCACTGAGGAGCCGACAGACACCCCGGTATGACAATCGGTGCCGGAACCTGAGCCAGGCACAGGTGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS GCA 72 bp | GCCTGCCCACTCCAGCATGTCCTCAATGCTTTCTGCTaGCCCTGGCACCAAGCGGCTCTGATCGGTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ACPLQHVLNAFC*PWHQAALIGVL Trigger: GAGGACACCGATCAGAGCCGCTTGGTGCCAGGGGCAGCAGAAAGCATTGAGGACATGCTGGAGTGGGCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CAA 90 bp | GAAACAGGGATAGGCAGCTCCAGATCTCAGCAAGGCTTCCGTGGCTaGGGCATACAGAGCCAGCCGCTGGGACTGACAGTAGGGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ETGIGSSRSQQGFRG*GIQSQPLGLTVGPC Trigger: GCAGGGCCCTACTGTCAGTCCCAGCGGCTGGCTCTGTATGCCCAAGCCACGGAAGCCTTGCTGAGATCTGGAGCTGCCTATCCCTGTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS CCA 72 bp | AGGGATAGGCAGCTCCAGATCTCAGCAAGGCTTCCGTaGCTTGGGCATACAGAGCCAGCCGCTGGGACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RDRQLQISARLP*LGHTEPAAGTD Trigger: GTCAGTCCCAGCGGCTGGCTCTGTATGCCCAAGCCACGGAAGCCTTGCTGAGATCTGGAGCTGCCTATCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 72 bp | GAGGTGGAGACTAGCCACTCGGAGCCCCGCAGCACATaGCTGATGCTCATGTGGTGGTCATCTACCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: EVETSHSEPRST*LMLMWWSSTTQ Trigger: CTGTGTGGTAGATGACCACCACATGAGCATCAGCCATGTGCTGCGGGGCTCCGAGTGGCTAGTCTCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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| CDS CCA 72 bp | GCAAGCGCTTGGCAATCACATCCACGTTTTCCGAGCTaGCACCCAGTTCTGATCGATGGACAGCAGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ASAWQSHPRFPS*HPVLIDGQQGG Trigger: CCCGCCCTGCTGTCCATCGATCAGAACTGGGTGCCAGCTCGGAAAACGTGGATGTGATTGCCAAGCGCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 72 bp | TCAATGCTTTCTGCTGCCCCTGGCACCAAGCGGCTCTaGTCGGTGTCCTCCAGCCTCAGAATGAAGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SMLSAAPGTKRL*SVSSSLRMKLP Trigger: AGGGAGCTTCATTCTGAGGCTGGAGGACACCGATCAGAGCCGCTTGGTGCCAGGGGCAGCAGAAAGCATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 72 bp | TGGAGACTAGCCACTCGGAGCCCCGCAGCACATGGCTaGTGCTCATGTGGTGGTCATCTACCACACAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: WRLATRSPAAHG*CSCGGHLPHRL Trigger: TAGCCTGTGTGGTAGATGACCACCACATGAGCATCAGCCATGTGCTGCGGGGCTCCGAGTGGCTAGTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 72 bp | ATAACTGGGTCCCCCTCCACACTGGCCACTTCATGCTaGGTCCAGCCATATACCAGGTCCTGGAAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ITGSPSTLATSC*VQPYTRSWKAG Trigger: ACCAGCCTTCCAGGACCTGGTATATGGCTGGACTCAGCATGAAGTGGCCAGTGTGGAGGGGGACCCAGTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS GCA 72 bp | CTGAGGGCCATCCGGAGGAGCTTCATCACACTGCTATaGTTGGCGCCTTCCAGACCTTCTGACAGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRAIRRSFITLL*LAPSRPSDSFF Trigger: GAAGAAGCTGTCAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGATGAAGCTCCTCCGGATGGCCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 72 bp | GGGCCATCCGGAGGAGCTTCATCACACTGCTATGCTTaGCGCCTTCCAGACCTTCTGACAGCTTCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPSGGASSHCYA*RLPDLLTASSA Trigger: AGCTGAAGAAGCTGTCAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGATGAAGCTCCTCCGGATGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CAA 72 bp | AGGGCCATCCGGAGGAGCTTCATCACACTGCTATGCTaGGCGCCTTCCAGACCTTCTGACAGCTTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAIRRSFITLLC*APSRPSDSFFS Trigger: GCTGAAGAAGCTGTCAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGATGAAGCTCCTCCGGATGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CAA 90 bp | TGTCCACTGAGGGCCATCCGGAGGAGCTTCATCACACTGCTATGCTaGGCGCCTTCCAGACCTTCTGACAGCTTCTTCAGCTCTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CPLRAIRRSFITLLC*APSRPSDSFFSSLF Trigger: GAACAGAGAGCTGAAGAAGCTGTCAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGATGAAGCTCCTCCGGATGGCCCTCAGTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CAA 90 bp | CTCAGCAGGAGGATCCTCTCCATATATGCAGGGTCCAGAACATCCTaGTTTTGCAGTTCACTCCCGAATGCCTCCTTCACCAGGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSRRILSIYAGSRTS*FCSSLPNASFTRPC Trigger: GCAGGGCCTGGTGAAGGAGGCATTCGGGAGTGAACTGCAAAACAAGGATGTTCTGGACCCTGCATATATGGAGAGGATCCTCCTGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 72 bp | CCAAGCGGCTCTGATCGGTGTCCTCCAGCCTCAGAATaGAGCTCCCTTGGTGCTTCTTGGCAAAGATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSGSDRCPPASE*SSLGASWQRCS Trigger: ACTACATCTTTGCCAAGAAGCACCAAGGGAGCTTCATTCTGAGGCTGGAGGACACCGATCAGAGCCGCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 72 bp | CCTCAGTGCTTCCTTCTTCAGAAGCTCCAGCCGCTGTaGCAAACAGAAACAGGGATAGGCAGCTCCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PQCFLLQKLQPL*QTETGIGSSRS Trigger: AGATCTGGAGCTGCCTATCCCTGTTTCTGTTTGCCACAGCGGCTGGAGCTTCTGAAGAAGGAAGCACTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS TCA 72 bp | CATCACACTGCTATGCTTGGCGCCTTCCAGACCTTCTaGCAGCTTCTTCAGCTCTCTGTTCAGCACATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HHTAMLGAFQTF*QLLQLSVQHIL Trigger: CAGGATGTGCTGAACAGAGAGCTGAAGAAGCTGTCAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTGTGATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CAA 90 bp | CAGGAGGATCCTCTCCATATATGCAGGGTCCAGAACATCCTTGTTTaGCAGTTCACTCCCGAATGCCTCCTTCACCAGGCCCTGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: QEDPLHICRVQNILV*QFTPECLLHQALQF Trigger: AAATTGCAGGGCCTGGTGAAGGAGGCATTCGGGAGTGAACTGCAAAACAAGGATGTTCTGGACCCTGCATATATGGAGAGGATCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CCA 72 bp | CGAGCCACAGTTGGTGATGATGTCAAGCAAGGCTTCTaGCAGAAAACCGGTGGCAGCAAAATGTTCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RATVGDDVKQGF*QKTGGSKMFQE Trigger: TTCCTGGAACATTTTGCTGCCACCGGTTTTCTGCCAGAAGCCTTGCTTGACATCATCACCAACTGTGGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CAA 72 bp | CTGCCCATTTGGTTCTCTGCAAACCCCGAGCCACAGTaGGTGATGATGTCAAGCAAGGCTTCTGGCAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPIWFSANPEPQ*VMMSSKASGRK Trigger: TTTTCTGCCAGAAGCCTTGCTTGACATCATCACCAACTGTGGCTCGGGGTTTGCAGAGAACCAAATGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
||
| CDS CAA 72 bp | AGGATCCTCTCCATATATGCAGGGTCCAGAACATCCTaGTTTTGCAGTTCACTCCCGAATGCCTCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: RILSIYAGSRTS*FCSSLPNASFT Trigger: GGTGAAGGAGGCATTCGGGAGTGAACTGCAAAACAAGGATGTTCTGGACCCTGCATATATGGAGAGGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033159.4 |
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