Pregenerated sensors for EAPP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054302Ensembl transcript IDs: ENSMUST00000067272.9, ENSMUST00000110713.10, ENSMUST00000160085.2, ENSMUST00000161592.8, ENSMUST00000162106.8, ENSMUST00000163433.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATAGTTCCCCTCAGGGCATACTAGAGGCCCCTTCAGGGAAACTTTaGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: NSSPQGILEAPSGKL*SECVCVCVCVCVCL Trigger: CAGACAGACACACACACACACACACACACACACACACTCACTCCAAAGTTTCCCTGAAGGGGCCTCTAGTATGCCCTGAGGGGAACTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR GCA 90 bp | TATCCAGTCCAGGAACCTGCACATGTCAAGCACGCACTCCATCACTaGTCCTCCCCATCCACAGAAGACAAAAGGAACCATTCATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: YPVQEPAHVKHALHH*SSPSTEDKRNHSFP Trigger: AGGAAATGAATGGTTCCTTTTGTCTTCTGTGGATGGGGAGGAGCAGTGATGGAGTGCGTGCTTGACATGTGCAGGTTCCTGGACTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTaGCTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTIRNKI*LPLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR GCA 90 bp | TCCTTCCACTGCAGATTCCAGGGATTGAACTCAGGTTATCAGGCTTaGATGCCAAGTGCAGAGTCATCTTGCCAACAGCTAAGCCTCATT | + |
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Preference number: 1 (lower is better) Translates to: SFHCRFQGLNSGYQA*MPSAESSCQQLSLI Trigger: AATGAGGCTTAGCTGTTGGCAAGATGACTCTGCACTTGGCATGCAAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGCAGTGGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR GCA 90 bp | TTCCCTTGTCACCATCAGATTACATCTTTACACATTGGGATTCCTTaGTTGTTACAGCATCATCTTCTCAGAGAGACCCAAAGGCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: FPCHHQITSLHIGIP*LLQHHLLRETQRQA Trigger: AGCTTGCCTTTGGGTCTCTCTGAGAAGATGATGCTGTAACAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CCA 90 bp | AGGAAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTaGGCAGTTACCTGTCACATTGATCAAGAATGGCTCGCTAAAACA | + |
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Preference number: 1 (lower is better) Translates to: RKEENKSLCLPYTQS*AVTCHIDQEWLAKT Trigger: TGTTTTAGCGAGCCATTCTTGATCAATGTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067272.9 |
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| 3UTR CCA 90 bp | AGCTGTTTTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTaGGATTCCTTGCTTGTTACAGCATCATCTTCTCAGAGAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: SCFLPLSPSDYIFTH*DSLLVTASSSQRDP Trigger: TGGGTCTCTCTGAGAAGATGATGCTGTAACAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAAAACAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR TCA 90 bp | GATCATAGCTTGAACAACAGCAACAGTAAAAACTCAGCAATGATGTaGAGTTTTACAGCTCTGGCGATTCTGAGTTCTACCAATATGAAT | + |
|
Preference number: 1 (lower is better) Translates to: DHSLNNSNSKNSAMM*SFTALAILSSTNMN Trigger: ATTCATATTGGTAGAACTCAGAATCGCCAGAGCTGTAAAACTTCACATCATTGCTGAGTTTTTACTGTTGCTGTTGTTCAAGCTATGATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160085.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGACTGGAGCAGATTCCAGGGATTaGACTCAGGTTATCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: EPSLQPSPGDFTTSRWTGADSRD*TQVIRL Trigger: AAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGC...TCCAGTCCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGACTCATTCAAACTCTCACTaGCCCAGCTCTCCTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: TEPSLQPSPGDFTTSRWTHSNSH*PSSPDL Trigger: CAAGTCAGGAGAGCTGGGCCAGTGAGAGTTTGAATG...AGTCCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CCA 90 bp | CCGCTGGACTGGAGGTGTGGTGCACTAGGGTGGTCACTAAATCTGAGAAGAAAGCCTTCAGGGAAACTTTaGAGTGAGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PLDWRCGALGWSLNLRRKPSGKL*SECVCV Trigger: CACACACACACACTCACTCCAAAGTTTCCCTGAAGG...CTTTCTTCTCAGATTTAGTGACCACCCTAGTGCACCACACCTCCAGTCCAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CAA 90 bp | CTCCTTCCACTGCAGATTCCAGGGATTGAACTCAGGTTATCAGGCTaGCATGCCAAGTGCAGAGTCATCTTGCCAACAGCTAAGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LLPLQIPGIELRLSG*HAKCRVILPTAKPH Trigger: ATGAGGCTTAGCTGTTGGCAAGATGACTCTGCACTTGGCATGCAAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGCAGTGGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGACTACAAGAGTCTATGTTTaGCTTATACACAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TEPSLQPSPGDFTTSRWTTRVYV*LIHRAG Trigger: CCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGT...AGTCCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR GCA 90 bp | CCGCTGGACTGGAGGTGTGGTGCACTAGGGTGGTCACTAAATCTGAGAAGAAAGAGTGCAGAGTCATCTTaGCAACAGCTAAGCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: PLDWRCGALGWSLNLRRKSAESS*QQLSLI Trigger: AATGAGGCTTAGCTGTTGGCAAGATGACTCTGCACT...CTTTCTTCTCAGATTTAGTGACCACCCTAGTGCACCACACCTCCAGTCCAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CAA 90 bp | AACTCCATTCAAACTCTCACTGGCCCAGCTCTCCTGACTTGTAGCTaGGAGAAGGCCCAGAAGGTAATCAGAGAGAGAAATAGTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: NSIQTLTGPALLTCS*EKAQKVIRERNSSP Trigger: AGGGGAACTATTTCTCTCTCTGATTACCTTCTGGGCCTTCTCCAAGCTACAAGTCAGGAGAGCTGGGCCAGTGAGAGTTTGAATGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTCATTTCCTGTTGTCTCAACTCCATTCAAACTCTCACTGGCCCAGCTCTCGCAGATTCCAGGGATTaGACTCAGGTTATCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PFISCCLNSIQTLTGPALADSRD*TQVIRL Trigger: AAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGC...GAGAGCTGGGCCAGTGAGAGTTTGAATGGAGTTGAGACAACAGGAAATGAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCCACCATGCCCTAAGCACTGAGAATGTCTTAGAAGCTCACTTGTGTGCTCCTTCAGGGAAACTTTaGAGTGAGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: IGHHALSTENVLEAHLCAPSGKL*SECVCV Trigger: CACACACACACACTCACTCCAAAGTTTCCCTGAAGG...AGCACACAAGTGAGCTTCTAAGACATTCTCAGTGCTTAGGGCATGGTGGCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR GCA 90 bp | GGTAAAGATGAGGCGGCTCCATCTCAGAAACAGCACTTACAGGTCGTTACAGAAAGTGCAGAGTCATCTTaGCAACAGCTAAGCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: GKDEAAPSQKQHLQVVTESAESS*QQLSLI Trigger: AATGAGGCTTAGCTGTTGGCAAGATGACTCTGCACT...TTCTGTAACGACCTGTAAGTGCTGTTTCTGAGATGGAGCCGCCTCATCTTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR CAA 90 bp | AACTTTCAAGAGTTGATTCTCTCCTTCCACTGCAGATTCCAGGGATaGAACTCAGGTTATCAGGCTTGCATGCCAAGTGCAGAGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: NFQELILSFHCRFQG*NSGYQACMPSAESS Trigger: AGATGACTCTGCACTTGGCATGCAAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGCAGTGGAAGGAGAGAATCAACTCTTGAAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CAA 90 bp | ATTGAACTCAGGTTATCAGGCTTGCATGCCAAGTGCAGAGTCATCTaGCCAACAGCTAAGCCTCATTTCTTTATAAAACACTGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: IELRLSGLHAKCRVI*PTAKPHFFIKHCRL Trigger: CAGCCTGCAGTGTTTTATAAAGAAATGAGGCTTAGCTGTTGGCAAGATGACTCTGCACTTGGCATGCAAGCCTGATAACCTGAGTTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CAA 90 bp | CTTCCCTTGTCACCATCAGATTACATCTTTACACATTGGGATTCCTaGCTTGTTACAGCATCATCTTCTCAGAGAGACCCAAAGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LPLSPSDYIFTHWDS*LVTASSSQRDPKAS Trigger: GCTTGCCTTTGGGTCTCTCTGAGAAGATGATGCTGTAACAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAAAGATGAGGCGGCTCCATCTCAGAAACAGCACTTACAGGTCGTTACAGAAGCTAGAAATTTCCTCTaGAAAAGAAGTCAGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GKDEAAPSQKQHLQVVTEARNFL*KRSQCS Trigger: AGAGCACTGACTTCTTTTCCAGAGGAAATTTCTAGC...TTCTGTAACGACCTGTAAGTGCTGTTTCTGAGATGGAGCCGCCTCATCTTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGGCAGTTACCTGTCACATTGATCAAGAATGGCTCGCTAAAACATTGAAAAACACTCTGTGCACATaGCAGGGTGATAGATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SWAVTCHIDQEWLAKTLKNTLCT*QGDRFP Trigger: AGGAAATCTATCACCCTGTCATGTGCACAGAGTGTT...TTTCAATGTTTTAGCGAGCCATTCTTGATCAATGTGACAGGTAACTGCCCAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067272.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTAGCACTAGAAGTGGAATaGATAATCTGTCCTCATGGG | + |
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Preference number: 2 (lower is better) Translates to: GKRKTRVYVCLIHRAGQLALEVE*IICPHG Trigger: CCCATGAGGACAGATTATTCATTCCACTTCTAGTGC...TAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTATAGCTGTTTTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTGGACTGGAGGTGTGGTaGACTAGGGTGGTCACTAAA | + |
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Preference number: 2 (lower is better) Translates to: LSIAVFFPCHHQITSLHIGLEVW*TRVVTK Trigger: TTTAGTGACCACCCTAGTGCACCACACCTCCAGTCC...AATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAAAACAGCTATAGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTGTCACCATCAGATTACATCTTTACACATTGGGATTCCTTGCTTGTTACAGACAAGAGTCTATGTTTaGCTTATACACAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PCHHQITSLHIGIPCLLQTRVYV*LIHRAG Trigger: CCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGT...CTGTAACAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTATAGCTGTTTTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTTGTGGTGCACTAGGGTaGTCACTAAATCTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LSIAVFFPCHHQITSLHICGALG*SLNLRR Trigger: TCTTCTCAGATTTAGTGACCACCCTAGTGCACCACA...AATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAAAACAGCTATAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR GCA 90 bp | AATATACACTGCAAAGGCTTTAAGGTTCCTTATAGCCTTTGTGAGCTAATCTTGCTTGTCTTTCCCAAGTaGTTGAATTATAGGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: NIHCKGFKVPYSLCELILLVFPK*LNYRPP Trigger: TGGTGGCCTATAATTCAAGCACTTGGGAAAGACAAG...CAAGATTAGCTCACAAAGGCTATAAGGAACCTTAAAGCCTTTGCAGTGTATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR CAA 90 bp | ATAAATAGTACATGGGATTCTCCTCTCTATAGCTGTTTTCTTCCCTaGTCACCATCAGATTACATCTTTACACATTGGGATTCCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: INSTWDSPLYSCFLP*SPSDYIFTHWDSLL Trigger: AAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAAAACAGCTATAGAGAGGAGAATCCCATGTACTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR TCA 90 bp | AATATACACTGCAAAGGCTTTAAGGTTCCTTATAGCCTTTGTGAGCTAATCTTGAAAACTTTCAAGAGTTaGTTCTCTCCTTCCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: NIHCKGFKVPYSLCELILKTFKS*FSPSTA Trigger: TGCAGTGGAAGGAGAGAATCAACTCTTGAAAGTTTT...CAAGATTAGCTCACAAAGGCTATAAGGAACCTTAAAGCCTTTGCAGTGTATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTCGGCCACAAGGGGAGTCGGACATCGATGGGGAAGAGTTGAGGCTAAAGCACTCCTGACTTGTAGCTaGGAGAAGGCCCAGAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: TSATRGVGHRWGRVEAKALLTCS*EKAQKV Trigger: TACCTTCTGGGCCTTCTCCAAGCTACAAGTCAGGAG...TGCTTTAGCCTCAACTCTTCCCCATCGATGTCCGACTCCCCTTGTGGCCGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR GCA 72 bp | CAGGAACCTGCACATGTCAAGCACGCACTCCATCACTaGTCCTCCCCATCCACAGAAGACAAAAGGAACCAT | + |
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Preference number: 3 (lower is better) Translates to: QEPAHVKHALHH*SSPSTEDKRNH Trigger: ATGGTTCCTTTTGTCTTCTGTGGATGGGGAGGAGCAGTGATGGAGTGCGTGCTTGACATGTGCAGGTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CCA 72 bp | CCTCAGGGCATACTAGAGGCCCCTTCAGGGAAACTTTaGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: PQGILEAPSGKL*SECVCVCVCVC Trigger: ACACACACACACACACACACACACACACTCACTCCAAAGTTTCCCTGAAGGGGCCTCTAGTATGCCCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR TCA 72 bp | CCCCCGTTCCTTCCCTTCTTGTCTTTCCCAAGTGCTTaGATTATAGGCCACCATGCCCTAAGCACTGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: PPFLPFLSFPSA*IIGHHALSTEN Trigger: ATTCTCAGTGCTTAGGGCATGGTGGCCTATAATTCAAGCACTTGGGAAAGACAAGAAGGGAAGGAACGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCCGTAACAAGATCTaGCTCCCTCTTCTGGAGTGTCTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTIRNKI*LPLLECLKTAT Trigger: TGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR GCA 72 bp | GTGATTTCACAACTTCCCGCTGGACTGGAGGTGTGGTaGACTAGGGTGGTCACTAAATCTGAGAAGAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: VISQLPAGLEVW*TRVVTKSEKKV Trigger: GACTTTCTTCTCAGATTTAGTGACCACCCTAGTGCACCACACCTCCAGTCCAGCGGGAAGTTGTGAAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CCA 72 bp | CAGGTGATTTCACAACTTCCCGCTGGACTGGAGGTGTaGTGCACTAGGGTGGTCACTAAATCTGAGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: QVISQLPAGLEV*CTRVVTKSEKK Trigger: TTTCTTCTCAGATTTAGTGACCACCCTAGTGCACCACACCTCCAGTCCAGCGGGAAGTTGTGAAATCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CCA 72 bp | CAAAGCTACGAAGGGAAATCAGATAGGAACAAAGCATaGCTCTTGGTGTCTAGCCCAAACGGCCTTAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QSYEGKSDRNKA*LLVSSPNGLRQ Trigger: CTGCCTAAGGCCGTTTGGGCTAGACACCAAGAGCCATGCTTTGTTCCTATCTGATTTCCCTTCGTAGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTCGGCCACAAGGGGAGTCGGACATCGATGGGGAAGAGTTGAGGCTAAAGCAAATGTCAAGTACATATaGCCTCCATATAGATACCAC | + |
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Preference number: 3 (lower is better) Translates to: TSATRGVGHRWGRVEAKANVKYI*PPYRYH Trigger: GTGGTATCTATATGGAGGCAATATGTACTTGACATT...TGCTTTAGCCTCAACTCTTCCCCATCGATGTCCGACTCCCCTTGTGGCCGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| 3UTR GCA 72 bp | TGCAGATTCCAGGGATTGAACTCAGGTTATCAGGCTTaGATGCCAAGTGCAGAGTCATCTTGCCAACAGCTA | + |
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Preference number: 3 (lower is better) Translates to: CRFQGLNSGYQA*MPSAESSCQQL Trigger: TAGCTGTTGGCAAGATGACTCTGCACTTGGCATGCAAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CAA 90 bp | GTAATCAGAGAGAGAAATAGTTCCCCTCAGGGCATACTAGAGGCCCCTTCAGGGGAAAACTTTCAAGAGTaGATTCTCTCCTTCCACTGC | + |
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Preference number: 3 (lower is better) Translates to: VIRERNSSPQGILEAPSGENFQE*ILSFHC Trigger: GCAGTGGAAGGAGAGAATCAACTCTTGAAAGTTTTC...CCCTGAAGGGGCCTCTAGTATGCCCTGAGGGGAACTATTTCTCTCTCTGATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CAA 90 bp | GACTGGAGGTGTGGTGCACTAGGGTGGTCACTAAATCTGAGAAGAAAGTCGGGCACCATTCATTTCCTGTaGTCTCAACTCCATTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: DWRCGALGWSLNLRRKSGTIHFL*SQLHSN Trigger: GTTTGAATGGAGTTGAGACAACAGGAAATGAATGGT...GCCCGACTTTCTTCTCAGATTTAGTGACCACCCTAGTGCACCACACCTCCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CAA 90 bp | GACTGGAGGTGTGGTGCACTAGGGTGGTCACTAAATCTGAGAAGAAAGTCGGGCAATGTCAAGTACATATaGCCTCCATATAGATACCAC | + |
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Preference number: 3 (lower is better) Translates to: DWRCGALGWSLNLRRKSGNVKYI*PPYRYH Trigger: GTGGTATCTATATGGAGGCAATATGTACTTGACATT...GCCCGACTTTCTTCTCAGATTTAGTGACCACCCTAGTGCACCACACCTCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGAGTTGATTCTCTCCTTCCACTGCAGATTCCAGGGATTGAACTCAGGTTATAAGTGCAGAGTCATCTaGCCAACAGCTAAGCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: QELILSFHCRFQGLNSGYKCRVI*PTAKPH Trigger: ATGAGGCTTAGCTGTTGGCAAGATGACTCTGCACTT...ATAACCTGAGTTCAATCCCTGGAATCTGCAGTGGAAGGAGAGAATCAACTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR TCA 72 bp | AACAGCACTTACAGGTCGTTACAGAAACCATCCCAGTaGAGGGAGAGAAAGATACTCAAAGCTACGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NSTYRSLQKPSQ*RERKILKATKG Trigger: TCCCTTCGTAGCTTTGAGTATCTTTCTCTCCCTTCACTGGGATGGTTTCTGTAACGACCTGTAAGTGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| 3UTR TCA 72 bp | GTCTCATTCATTATGGCATTTTCATACGCACAGCACTaGACTTTGCTCCTAGTCACTGTCCCACATGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VSFIMAFSYAQH*TLLLVTVPHVC Trigger: GCAAACATGTGGGACAGTGACTAGGAGCAAAGTTCAGTGCTGTGCGTATGAAAATGCCATAATGAATGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACTCAAGGAAAACAATGTGCGCATGACAAAGCATGCCACAGTTTGTTTTCCCAACAAGAGTCTATGTTaGCCTTATACACAGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLKENNVRMTKHATVCFPNKSLC*PYTQSW Trigger: CCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTT...GGGAAAACAAACTGTGGCATGCTTTGTCATGCGCACATTGTTTTCCTTGAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACTCAAGGAAAACAATGTGCGCATGACAAAGCATGCCACAGTTTGTTTTCCCACACATTGGGATTCCTaGCTTGTTACAGCATCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RLKENNVRMTKHATVCFPTHWDS*LVTASS Trigger: AGATGATGCTGTAACAAGCAAGGAATCCCAATGTGT...GGGAAAACAAACTGTGGCATGCTTTGTCATGCGCACATTGTTTTCCTTGAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| 3UTR TCA 72 bp | AAAGACTTCATCCTTGTCATAGACTGCCACTTCAGTTaGACACTCTGTGCACATGACAGGGTGATAGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: KDFILVIDCHFS*TLCAHDRVIDF Trigger: GAAATCTATCACCCTGTCATGTGCACAGAGTGTTCAACTGAAGTGGCAGTCTATGACAAGGATGAAGTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067272.9 |
||
| 3UTR CCA 72 bp | GAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTaGGCAGTTACCTGTCACATTGATCAAGAATGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ENKSLCLPYTQS*AVTCHIDQEWL Trigger: GAGCCATTCTTGATCAATGTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067272.9 |
||
| 3UTR CCA 72 bp | CTTCCCTTGTCACCATCAGATTACATCTTTACACATTaGGATTCCTTGCTTGTTACAGCATCATCTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPLSPSDYIFTH*DSLLVTASSSQ Trigger: CTGAGAAGATGATGCTGTAACAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR-3UTR CAA 90 bp | AATATACACTGCAAAGGCTTTAAGGTTCCTTATAGCCTTTGTGAGCTAATCTTGGTCTTTCCCAAGTGCTaGAATTATAGGCCACCATGC | + |
|
Preference number: 3 (lower is better) Translates to: NIHCKGFKVPYSLCELILVFPKC*NYRPPC Trigger: GCATGGTGGCCTATAATTCAAGCACTTGGGAAAGAC...CAAGATTAGCTCACAAAGGCTATAAGGAACCTTAAAGCCTTTGCAGTGTATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTATAGCTGTTTTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTAACAAGAGTCTATGTTaGCCTTATACACAGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSIAVFFPCHHQITSLHINKSLC*PYTQSW Trigger: CCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTT...AATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAAAACAGCTATAGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR TCA 72 bp | ACCCTGATACTTGGAACAGATACTTGCCTAGCCACGTaGGAACACTACCTAATGTATAATGTATATTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: TLILGTDTCLAT*EHYLMYNVYYL Trigger: TAGGTAATATACATTATACATTAGGTAGTGTTCTCACGTGGCTAGGCAAGTATCTGTTCCAAGTATCAGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| 3UTR TCA 72 bp | TTCCCTGATAAAATTGCCATGAATATCCTAGGCATTTaGAATATCATCCTAAAAGAAGTAGTTCCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FPDKIAMNILGI*NIILKEVVPGL Trigger: CAGCCCTGGAACTACTTCTTTTAGGATGATATTTCAAATGCCTAGGATATTCATGGCAATTTTATCAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGACTGGAGACTGCCACTTCAGTTaGACACTCTGTGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EPSLQPSPGDFTTSRWTGDCHFS*TLCAHD Trigger: GTCATGTGCACAGAGTGTTCAACTGAAGTGGCAGTC...TCCAGTCCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR CAA 72 bp | GCACTGAACTTTGCTCCTAGTCACTGTCCCACATGTTaGCTCGCCCCCAAACTGTCAGTCAACATTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALNFAPSHCPTC*LAPKLSVNIPS Trigger: GGAGGGAATGTTGACTGACAGTTTGGGGGCGAGCAAACATGTGGGACAGTGACTAGGAGCAAAGTTCAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACCATGCCCCCTCCTCTTaGCGTCAACCCAGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ENKSLCLPYTQSWAVTCHHAPSS*RQPRPG Trigger: ACCAGGCCTGGGTTGACGCCAAGAGGAGGGGGCATG...GTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110713.10 |
||
| 3UTR CAA 72 bp | CTGCAGATTCCAGGGATTGAACTCAGGTTATCAGGCTaGCATGCCAAGTGCAGAGTCATCTTGCCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIPGIELRLSG*HAKCRVILPTA Trigger: AGCTGTTGGCAAGATGACTCTGCACTTGGCATGCAAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR CAA 72 bp | CATGCCCTAAGCACTGAGAATGTCTTAGAAGCTCACTaGTGTGCTGGTGTAGTGTTGGCTATCCAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HALSTENVLEAH*CAGVVLAIQSR Trigger: CCTGGACTGGATAGCCAACACTACACCAGCACACAAGTGAGCTTCTAAGACATTCTCAGTGCTTAGGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR CAA 72 bp | AGAGATAGTTGTGAGCCACCATGTGGTTGCTGGGAATaGGACTCAGGACCTCTGTTAGAGCAAGCAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDSCEPPCGCWE*DSGPLLEQAVS Trigger: ACTGACTGCTTGCTCTAACAGAGGTCCTGAGTCCAATTCCCAGCAACCACATGGTGGCTCACAACTATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR CAA 72 bp | TACGAAGGGAAATCAGATAGGAACAAAGCATGGCTCTaGGTGTCTAGCCCAAACGGCCTTAGGCAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YEGKSDRNKAWL*VSSPNGLRQCL Trigger: CAGACACTGCCTAAGGCCGTTTGGGCTAGACACCAAGAGCCATGCTTTGTTCCTATCTGATTTCCCTTCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGCACTGAGAATGTCTTAGAAGCTCACTTGTGTGCTGGTGTAGTGTTGGCTCACTTTGGCAACTCCTaGAGAAGACCCTGTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSTENVLEAHLCAGVVLAHFGNS*RRPCSQ Trigger: CTGGGAACAGGGTCTTCTTCAGGAGTTGCCAAAGTG...AGCCAACACTACACCAGCACACAAGTGAGCTTCTAAGACATTCTCAGTGCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR TCA 90 bp | ACCTCGGCCACAAGGGGAGTCGGACATCGATGGGGAAGAGTTGAGGCTAAAGCAGGCTCGCTAAAACATTaGAAAAGTGAAAGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSATRGVGHRWGRVEAKAGSLKH*KSERLH Trigger: ATGAAGTCTTTCACTTTTTCAATGTTTTAGCGAGCC...TGCTTTAGCCTCAACTCTTCCCCATCGATGTCCGACTCCCCTTGTGGCCGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGCCACCATGCCCTAAGCACTGAGAATGTCTTAGAAGCTCACTTGTGTGCTCTCCGCTTCTCTCTCTaGGGGATCTTCAGGATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGHHALSTENVLEAHLCALRFSL*GIFRIR Trigger: TCTAATCCTGAAGATCCCGCAGAGAGAGAAGCGGAG...AGCACACAAGTGAGCTTCTAAGACATTCTCAGTGCTTAGGGCATGGTGGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGTCTTCTTCTTCTTCTTaGTCACTGTTTTGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTEPSLQPSPGDFTTSRWSSSSS*SLFCPH Trigger: ATGAGGACAAAACAGTGACCAAGAAGAAGAAGAAGA...CCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTCAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGACTGGATTTCCTCCTGTTTTCTaGATTCTTGTATCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EPSLQPSPGDFTTSRWTGFPPVF*ILVSQN Trigger: GTTCTGAGATACAAGAATCCAGAAAACAGGAGGAAA...TCCAGTCCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTAGATAACCCCTCCTCTTaGCGTCAACCCAGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GKRKTRVYVCLIHRAGQLDNPSS*RQPRPG Trigger: ACCAGGCCTGGGTTGACGCCAAGAGGAGGGGTTATC...TAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR CAA 72 bp | GAGTTGATTCTCTCCTTCCACTGCAGATTCCAGGGATaGAACTCAGGTTATCAGGCTTGCATGCCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELILSFHCRFQG*NSGYQACMPSA Trigger: TGCACTTGGCATGCAAGCCTGATAACCTGAGTTCAATCCCTGGAATCTGCAGTGGAAGGAGAGAATCAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACCACTTTGGCAACTCCTaGAGAAGACCCTGTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENKSLCLPYTQSWAVTCHHFGNS*RRPCSQ Trigger: CTGGGAACAGGGTCTTCTTCAGGAGTTGCCAAAGTG...GTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACATCACTTTGGCAACTCCTaGAGAAGACCCTGTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQESMFALYTELGSYLSHHFGNS*RRPCSQ Trigger: CTGGGAACAGGGTCTTCTTCAGGAGTTGCCAAAGTG...ATGTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR TCA 90 bp | AGACTCAAGGAAAACAATGTGCGCATGACAAAGCATGCCACAGTTTGTTTTCCCGACTGCCACTTCAGTTaGACACTCTGTGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLKENNVRMTKHATVCFPDCHFS*TLCAHD Trigger: GTCATGTGCACAGAGTGTTCAACTGAAGTGGCAGTC...GGGAAAACAAACTGTGGCATGCTTTGTCATGCGCACATTGTTTTCCTTGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCCTCCGCTTCTCTCTCTaGGGGATCTTCAGGATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKTRVYVCLIHRAGQLPVLRFSL*GIFRIR Trigger: TCTAATCCTGAAGATCCCGCAGAGAGAGAAGCGGAG...GACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGATGAGGCGGCTCCATCTCAGAAACAGCACTTACAGGTCGTTACAGAACCATTGTCTTCATGGTaGAGTTTAGTTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKDEAAPSQKQHLQVVTEPLSSW*SLVQPP Trigger: TGGAGGCTGAACTAAACTCCACCATGAAGACAATGG...TTCTGTAACGACCTGTAAGTGCTGTTTCTGAGATGGAGCCGCCTCATCTTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCGACTGCCACTTCAGTTaGACACTCTGTGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEENKSLCLPYTQSWAVTDCHFS*TLCAHD Trigger: GTCATGTGCACAGAGTGTTCAACTGAAGTGGCAGTC...GGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACTCCGCTTCTCTCTCTaGGGGATCTTCAGGATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKRKTRVYVCLIHRAGQLLRFSL*GIFRIR Trigger: TCTAATCCTGAAGATCCCGCAGAGAGAGAAGCGGAG...TAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCACTGAGAATGTCTTAGAAGCTCACTTGTGTGCTGGTGTAGTGTTGGCTCCATTGTCTTCATGGTaGAGTTTAGTTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTENVLEAHLCAGVVLAPLSSW*SLVQPP Trigger: TGGAGGCTGAACTAAACTCCACCATGAAGACAATGG...AGCCAACACTACACCAGCACACAAGTGAGCTTCTAAGACATTCTCAGTGCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACCCAGTGAGGATAACTaGTCCTCCATTGTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GKQESMFALYTELGSYLSPSEDN*SSIVFM Trigger: CATGAAGACAATGGAGGACCAGTTATCCTCACTGGG...TGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR TCA 90 bp | AGCAATGATGTGAAGTTTTACAGCTCTGGCGATTCTGAGTTCTACCAATATGAACACTTTGGCAACTCCTaGAGAAGACCCTGTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNDVKFYSSGDSEFYQYEHFGNS*RRPCSQ Trigger: CTGGGAACAGGGTCTTCTTCAGGAGTTGCCAAAGTG...TTCATATTGGTAGAACTCAGAATCGCCAGAGCTGTAAAACTTCACATCATTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160085.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCAAACACTCTGTGCACATaGCAGGGTGATAGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKQESMFALYTELGSYLSNTLCT*QGDRFP Trigger: AGGAAATCTATCACCCTGTCATGTGCACAGAGTGTT...TGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACCATTGTCTTCATGGTaGAGTTTAGTTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKQESMFALYTELGSYLSPLSSW*SLVQPP Trigger: TGGAGGCTGAACTAAACTCCACCATGAAGACAATGG...TGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTACAAATATGCACTAGAAGTGGAATGAATAATCTGTCCTCATGGGAAAATGATAACCCCTCCTCTTaGCGTCAACCCAGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLQICTRSGMNNLSSWENDNPSS*RQPRPG Trigger: ACCAGGCCTGGGTTGACGCCAAGAGGAGGGGTTATC...ATTTTCCCATGAGGACAGATTATTCATTCCACTTCTAGTGCATATTTGTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR TCA 90 bp | CCATTCATTTCCTGTTGTCTCAACTCCATTCAAACTCTCACTGGCCCAGCTCTCGGCTCGCTAAAACATTaGAAAAGTGAAAGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFISCCLNSIQTLTGPALGSLKH*KSERLH Trigger: ATGAAGTCTTTCACTTTTTCAATGTTTTAGCGAGCC...GAGAGCTGGGCCAGTGAGAGTTTGAATGGAGTTGAGACAACAGGAAATGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR CAA 72 bp | AGGTTATCAGGCTTGCATGCCAAGTGCAGAGTCATCTaGCCAACAGCTAAGCCTCATTTCTTTATAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RLSGLHAKCRVI*PTAKPHFFIKH Trigger: GTGTTTTATAAAGAAATGAGGCTTAGCTGTTGGCAAGATGACTCTGCACTTGGCATGCAAGCCTGATAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| 3UTR CAA 72 bp | TCACCATCAGATTACATCTTTACACATTGGGATTCCTaGCTTGTTACAGCATCATCTTCTCAGAGAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSDYIFTHWDS*LVTASSSQRDP Trigger: TGGGTCTCTCTGAGAAGATGATGCTGTAACAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTGGCTCGCTAAAACATTaGAAAAGTGAAAGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EENKSLCLPYTQSWAVTCGSLKH*KSERLH Trigger: ATGAAGTCTTTCACTTTTTCAATGTTTTAGCGAGCC...ACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | AGCAATGATGTGAAGTTTTACAGCTCTGGCGATTCTGAGTTCTACCAATATGAACCATTGTCTTCATGGTaGAGTTTAGTTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNDVKFYSSGDSEFYQYEPLSSW*SLVQPP Trigger: TGGAGGCTGAACTAAACTCCACCATGAAGACAATGG...TTCATATTGGTAGAACTCAGAATCGCCAGAGCTGTAAAACTTCACATCATTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160085.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACTCTTCTTCTTCTTCTTaGTCACTGTTTTGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ENKSLCLPYTQSWAVTCHSSSSS*SLFCPH Trigger: ATGAGGACAAAACAGTGACCAAGAAGAAGAAGAAGA...GTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTGGGATTCCTTGCTTGAACAGCATCACTGTTTaGAACAGGCTGTTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFPCHHQITSLHIGIPCLNSITV*NRLLFL Trigger: CAGAAACAACAGCCTGTTCCAAACAGTGATGCTGTT...CAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACATTCTTCTTCTTCTTCTTaGTCACTGTTTTGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQESMFALYTELGSYLSHSSSSS*SLFCPH Trigger: ATGAGGACAAAACAGTGACCAAGAAGAAGAAGAAGA...ATGTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTTTCCTCCTGTTTTCTaGATTCTTGTATCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KEENKSLCLPYTQSWAVTFPPVF*ILVSQN Trigger: GTTCTGAGATACAAGAATCCAGAAAACAGGAGGAAA...GGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CCA 90 bp | GAGAAAGATACTCAAAGCTACGAAGGGAAATCAGATAGGAACAAAGCATGGCTCTTTCCTCCTGTTTTCTaGATTCTTGTATCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EKDTQSYEGKSDRNKAWLFPPVF*ILVSQN Trigger: GTTCTGAGATACAAGAATCCAGAAAACAGGAGGAAA...GAGCCATGCTTTGTTCCTATCTGATTTCCCTTCGTAGCTTTGAGTATCTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| CDS-3UTR CCA 90 bp | TGTCTACAAATATGCACTAGAAGTGGAATGAATAATCTGTCCTCATGGGAAAATTGTCGTCATACAGGCTaGGCAATTCAGAACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CLQICTRSGMNNLSSWENCRHTG*AIQNSI Trigger: GATGCTGTTCTGAATTGCCCAGCCTGTATGACGACA...ATTTTCCCATGAGGACAGATTATTCATTCCACTTCTAGTGCATATTTGTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| 3UTR CAA 72 bp | TCTTCCCTTGTCACCATCAGATTACATCTTTACACATaGGGATTCCTTGCTTGTTACAGCATCATCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLVTIRLHLYT*GFLACYSIIFS Trigger: TGAGAAGATGATGCTGTAACAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | AGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCTCATGCCCCCTCCTCTaGGCGTCAACCCAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKTRVYVCLIHRAGQLPVSCPLL*ASTQAW Trigger: CCAGGCCTGGGTTGACGCCAAGAGGAGGGGGCATGA...GACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110713.10 |
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| CDS CCA 90 bp | ACATTGCCCTGTACTGCGTCTTGTAGGATTCATGCCCCCTCCTCTTaGCGTCAACCCAGGCCTGGTCTCTGTTATCTTTCTCAGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLPCTASCRIHAPSS*RQPRPGLCYLSQDH Trigger: ATGATCCTGAGAAAGATAACAGAGACCAGGCCTGGGTTGACGCCAAGAGGAGGGGGCATGAATCCTACAAGACGCAGTACAGGGCAATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110713.10 |
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| CDS-3UTR CAA 90 bp | ACCACTGAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGGCAGCTCATCGTTTGTaGGAATCCTGTGTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TTEPSLQPSPGDFTTSRWAAHRL*ESCVVS Trigger: AGAAACAACACAGGATTCCAACAAACGATGAGCTGC...CCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTCAGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | GAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGACTGGAACAGCAGCTCATCGTTaGTTGGAATCCTGTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPSLQPSPGDFTTSRWTGTAAHR*LESCVV Trigger: AACAACACAGGATTCCAACAAACGATGAGCTGCTGT...TCCAGTCCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | TCTGACGTGGCCTTTGCAATCCAAAAGCATGATAACCCCTCCTCTTaGCGTCAACCCAGGCCTGGTCTCTGTTATCTTTCTCAGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SDVAFAIQKHDNPSS*RQPRPGLCYLSQDH Trigger: ATGATCCTGAGAAAGATAACAGAGACCAGGCCTGGGTTGACGCCAAGAGGAGGGGTTATCATGCTTTTGGATTGCAAAGGCCACGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | GTGACTCCTCCCACTTTGGCAACTCCTGTTCCCAGTGAGGATAACTaGTCCTCCATTGTCTTCATGGTGGAGTTTAGTTCAGCCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTLATPVPSEDN*SSIVFMVEFSSASI Trigger: AATGGAGGCTGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGAGTTGCCAAAGTGGGAGGAGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162106.8 |
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| CDS-3UTR CAA 90 bp | GAGCCATCTCTCCAGCCCTCTCCAGGTGATTTCACAACTTCCCGCTGGACTGGATTCTTCTTCTTCTTCTaGGTCACTGTTTTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EPSLQPSPGDFTTSRWTGFFFFF*VTVLSS Trigger: TGAGGACAAAACAGTGACCAAGAAGAAGAAGAAGAA...TCCAGTCCAGCGGGAAGTTGTGAAATCACCTGGAGAGGGCTGGAGAGATGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | ACTTTGGCAACTCCTGAAGAAGACCCTGTTCCCAGTGAGGATAACTaGTCCTCCATTGTCTTCATGGTGGAGTTTAGTTCAGCCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TLATPEEDPVPSEDN*SSIVFMVEFSSASI Trigger: AATGGAGGCTGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGGTCTTCTTCAGGAGTTGCCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110713.10 ENSMUST00000160085.2 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | ATTCAGAACAGCATCACTGTTTGGAACAGGCTGTTGTTTCTGACGTaGCCTTTGCAATCCAAAAGCATGATAACCCCTCCTCTTGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IQNSITVWNRLLFLT*PLQSKSMITPPLGV Trigger: GACGCCAAGAGGAGGGGTTATCATGCTTTTGGATTGCAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAACAGTGATGCTGTTCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | CAATGTCGTCATACAGGCTGGGCAATTCAGAACAGCATCACTGTTTaGAACAGGCTGTTGTTTCTGACGTGGCCTTTGCAATCCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QCRHTGWAIQNSITV*NRLLFLTWPLQSKS Trigger: GCTTTTGGATTGCAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAACAGTGATGCTGTTCTGAATTGCCCAGCCTGTATGACGACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | AGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCGTGACTCCTCCCACTTaGGCAACTCCTGAAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RKTRVYVCLIHRAGQLPVVTPPT*ATPEED Trigger: GTCTTCTTCAGGAGTTGCCAAAGTGGGAGGAGTCAC...GACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS GCA 90 bp | TCTCAGAACCTCTTCTCTGTTGATAGAACAATTCATCACAAACATTaGCCTGTACTGCGTCTTGTAGGATTCATGCCCCCTCCTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQNLFSVDRTIHHKH*PVLRLVGFMPPPLG Trigger: GCCAAGAGGAGGGGGCATGAATCCTACAAGACGCAGTACAGGGCAATGTTTGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110713.10 |
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| CDS-3UTR CAA 90 bp | GTAATCAGAGAGAGAAATAGTTCCCCTCAGGGCATACTAGAGGCCCCTTCAGGGCAAATTCATCTTCACTaGATGACTCACTTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIRERNSSPQGILEAPSGQIHLH*MTHFLQ Trigger: CTGGAGAAAGTGAGTCATCAAGTGAAGATGAATTTG...CCCTGAAGGGGCCTCTAGTATGCCCTGAGGGGAACTATTTCTCTCTCTGATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | CCATTCATTTCCTGTTGTCTCAACTCCATTCAAACTCTCACTGGCCCAGCTCTCACAGCAGCTCATCGTTaGTTGGAATCCTGTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PFISCCLNSIQTLTGPALTAAHR*LESCVV Trigger: AACAACACAGGATTCCAACAAACGATGAGCTGCTGT...GAGAGCTGGGCCAGTGAGAGTTTGAATGGAGTTGAGACAACAGGAAATGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | CAAGAGTTGATTCTCTCCTTCCACTGCAGATTCCAGGGATTGAACTCAGGTTATGTTTGGAACAGGCTGTaGTTTCTGACGTGGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QELILSFHCRFQGLNSGYVWNRL*FLTWPL Trigger: CAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAAC...ATAACCTGAGTTCAATCCCTGGAATCTGCAGTGGAAGGAGAGAATCAACTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | GTAATCAGAGAGAGAAATAGTTCCCCTCAGGGCATACTAGAGGCCCCTTCAGGGAGAACCTCTTCTCTGTaGATAGAACAATTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: VIRERNSSPQGILEAPSGRTSSL*IEQFIT Trigger: TGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCT...CCCTGAAGGGGCCTCTAGTATGCCCTGAGGGGAACTATTTCTCTCTCTGATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | ATAGGCCACCATGCCCTAAGCACTGAGAATGTCTTAGAAGCTCACTTGTGTGCTTTTCTGACGTGGCCTTaGCAATCCAAAAGCATGATA | + |
|
Preference number: 5 (lower is better) Translates to: IGHHALSTENVLEAHLCAFLTWP*QSKSMI Trigger: TATCATGCTTTTGGATTGCAAAGGCCACGTCAGAAA...AGCACACAAGTGAGCTTCTAAGACATTCTCAGTGCTTAGGGCATGGTGGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCGTTTGGAACAGGCTGTaGTTTCTGACGTGGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KEENKSLCLPYTQSWAVTVWNRL*FLTWPL Trigger: CAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAAC...GGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTGCAGCTCATCGTTTGTaGGAATCCTGTGTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EENKSLCLPYTQSWAVTCAAHRL*ESCVVS Trigger: AGAAACAACACAGGATTCCAACAAACGATGAGCTGC...ACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | GAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACACAGCAGCTCATCGTTaGTTGGAATCCTGTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ENKSLCLPYTQSWAVTCHTAAHR*LESCVV Trigger: AACAACACAGGATTCCAACAAACGATGAGCTGCTGT...GTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | ATAGGCCACCATGCCCTAAGCACTGAGAATGTCTTAGAAGCTCACTTGTGTGCTCTGTTTTCTGGATTCTaGTATCTCAGAACCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGHHALSTENVLEAHLCALFSGF*YLRTSS Trigger: AGAAGAGGTTCTGAGATACAAGAATCCAGAAAACAG...AGCACACAAGTGAGCTTCTAAGACATTCTCAGTGCTTAGGGCATGGTGGCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS GCA 90 bp | TCTCAGAACCTCTTCTCTGTTGATAGAACAATTCATCACAAACATTaGCCTGTACTGCGTCTTGTAGGATTCATGCCTCTGGCAATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQNLFSVDRTIHHKH*PVLRLVGFMPLAIK Trigger: CTTGATTGCCAGAGGCATGAATCCTACAAGACGCAGTACAGGGCAATGTTTGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | ACCCTGTTCCCAGTGAGGATAACTGGTCCTCCATTGTCTTCATGGTaGAGTTTAGTTCAGCCTCCATTTCTTTTTCAAATTCATCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLFPVRITGPPLSSW*SLVQPPFLFQIHLH Trigger: GTGAAGATGAATTTGAAAAAGAAATGGAGGCTGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110713.10 ENSMUST00000160085.2 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | CTCCTGTTCCCAGTGAGGATAACTGGTCCTCCATTGTCTTCATGGTaGAGTTTAGTTCAGCCTCCATTTCTTTTTCAAATTCATCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLFPVRITGPPLSSW*SLVQPPFLFQIHLH Trigger: GTGAAGATGAATTTGAAAAAGAAATGGAGGCTGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162106.8 |
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| CDS-3UTR CAA 90 bp | GGTAAAGATGAGGCGGCTCCATCTCAGAAACAGCACTTACAGGTCGTTACAGAATGTTGGAATCCTGTGTaGTTTCTTCTTCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKDEAAPSQKQHLQVVTECWNPV*FLLLLL Trigger: AAGAAGAAGAAGAAGAAACAACACAGGATTCCAACA...TTCTGTAACGACCTGTAAGTGCTGTTTCTGAGATGGAGCCGCCTCATCTTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCGCAGCTCATCGTTTGTaGGAATCCTGTGTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEENKSLCLPYTQSWAVTAAHRL*ESCVVS Trigger: AGAAACAACACAGGATTCCAACAAACGATGAGCTGC...GGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTTTTCTGACGTGGCCTTaGCAATCCAAAAGCATGATA | + |
|
Preference number: 5 (lower is better) Translates to: EENKSLCLPYTQSWAVTCFLTWP*QSKSMI Trigger: TATCATGCTTTTGGATTGCAAAGGCCACGTCAGAAA...ACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS TCA 90 bp | CCTCAGAATCAGAATCAAAATATATCTCATCATAGAACTTTTCTGTaGCTCCTCCCACTTTGGCAACTCCTGAAGAAGACCCTGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQNQNQNISHHRTFL*LLPLWQLLKKTLFP Trigger: TGGGAACAGGGTCTTCTTCAGGAGTTGCCAAAGTGGGAGGAGTCACAGAAAAGTTCTATGATGAGATATATTTTGATTCTGATTCTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110713.10 ENSMUST00000160085.2 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | AAGACCCTGTTCCCAGTGAGGATAACTGGTCCTCCATTGTCTTCATaGTGGAGTTTAGTTCAGCCTCCATTTCTTTTTCAAATTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KTLFPVRITGPPLSS*WSLVQPPFLFQIHL Trigger: AAGATGAATTTGAAAAAGAAATGGAGGCTGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000110713.10 ENSMUST00000160085.2 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 90 bp | CAACTCCTGTTCCCAGTGAGGATAACTGGTCCTCCATTGTCTTCATaGTGGAGTTTAGTTCAGCCTCCATTTCTTTTTCAAATTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLLFPVRITGPPLSS*WSLVQPPFLFQIHL Trigger: AAGATGAATTTGAAAAAGAAATGGAGGCTGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162106.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTTTCTTCTTCTTCTTCTaGGTCACTGTTTTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EENKSLCLPYTQSWAVTCFFFFF*VTVLSS Trigger: TGAGGACAAAACAGTGACCAAGAAGAAGAAGAAGAA...ACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | AGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCCTGTTTTCTGGATTCTaGTATCTCAGAACCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKTRVYVCLIHRAGQLPVLFSGF*YLRTSS Trigger: AGAAGAGGTTCTGAGATACAAGAATCCAGAAAACAG...GACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS TCA 90 bp | CCTCAGAATCAGAATCAAAATATATCTCATCATAGAACTTTTCTGTaGCTCCTCCCACTTTGGCAACTCCTGTTCCCAGTGAGGATAACT | + |
|
Preference number: 5 (lower is better) Translates to: PQNQNQNISHHRTFL*LLPLWQLLFPVRIT Trigger: AGTTATCCTCACTGGGAACAGGAGTTGCCAAAGTGGGAGGAGTCACAGAAAAGTTCTATGATGAGATATATTTTGATTCTGATTCTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162106.8 |
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| CDS CCA 90 bp | ATTAGACCTCATCTTCTTAGCACTCCGCCGTTTCCTCCTGTTTTCTaGATTCTTGTATCTCAGAACCTCTTCTCTGTTGATAGAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: IRPHLLSTPPFPPVF*ILVSQNLFSVDRTI Trigger: AATTGTTCTATCAACAGAGAAGAGGTTCTGAGATACAAGAATCCAGAAAACAGGAGGAAACGGCGGAGTGCTAAGAAGATGAGGTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACATCAAATTCATCTTCACTaGATGACTCACTTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQESMFALYTELGSYLSHQIHLH*MTHFLQ Trigger: CTGGAGAAAGTGAGTCATCAAGTGAAGATGAATTTG...ATGTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTCACAGAACCTCTTCTCTGTaGATAGAACAATTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ENKSLCLPYTQSWAVTCHRTSSL*IEQFIT Trigger: TGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCT...GTGACAGGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS CCA 90 bp | GTCTCTGTTATCTTTCTCAGGATCATACAGCAGCTCATCGTTTGTTaGAATCCTGTGTTGTTTCTTCTTCTTCTTCTTGGTCACTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSVIFLRIIQQLIVC*NPVLFLLLLLGHCF Trigger: AAAACAGTGACCAAGAAGAAGAAGAAGAAACAACACAGGATTCCAACAAACGATGAGCTGCTGTATGATCCTGAGAAAGATAACAGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGGAAAACAAGAGTCTATGTTTGCCTTATACACAGAGCTGGGCAGTTACCTGTTGGAATCCTGTGTaGTTTCTTCTTCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KEENKSLCLPYTQSWAVTCWNPV*FLLLLL Trigger: AAGAAGAAGAAGAAGAAACAACACAGGATTCCAACA...GGTAACTGCCCAGCTCTGTGTATAAGGCAAACATAGACTCTTGTTTTCCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTGGGATTCCTTGCTTGTGTTGGAATCCTGTGTaGTTTCTTCTTCTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FFPCHHQITSLHIGIPCLCWNPV*FLLLLL Trigger: AAGAAGAAGAAGAAGAAACAACACAGGATTCCAACA...CAAGCAAGGAATCCCAATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | CAATCCTGTTACAAATTTGTCTCCGATCATAGCTTGAACAACAGCAACAGTAAACAAGCCTCGTCTTTTTaGAGGAGACTTGTTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: QSCYKFVSDHSLNNSNSKQASSF*RRLVLF Trigger: GAACAAAACAAGTCTCCTCAAAAAAGACGAGGCTTG...TTTACTGTTGCTGTTGTTCAAGCTATGATCGGAGACAAATTTGTAACAGGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160085.2 |
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| CDS-3UTR CAA 90 bp | CAATCCTGTTACAAATTTGTCTCCGATCATAGCTTGAACAACAGCAACAGTAAACAAATTCATCTTCACTaGATGACTCACTTTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: QSCYKFVSDHSLNNSNSKQIHLH*MTHFLQ Trigger: CTGGAGAAAGTGAGTCATCAAGTGAAGATGAATTTG...TTTACTGTTGCTGTTGTTCAAGCTATGATCGGAGACAAATTTGTAACAGGATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160085.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTATAGCTGTTTTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTCAAATTCATCTTCACTaGATGACTCACTTTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSIAVFFPCHHQITSLHIQIHLH*MTHFLQ Trigger: CTGGAGAAAGTGAGTCATCAAGTGAAGATGAATTTG...AATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAAAACAGCTATAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | AATATACACTGCAAAGGCTTTAAGGTTCCTTATAGCCTTTGTGAGCTAATCTTGTTCTTCTTCTTCTTCTaGGTCACTGTTTTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: NIHCKGFKVPYSLCELILFFFFF*VTVLSS Trigger: TGAGGACAAAACAGTGACCAAGAAGAAGAAGAAGAA...CAAGATTAGCTCACAAAGGCTATAAGGAACCTTAAAGCCTTTGCAGTGTATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161592.8 |
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| CDS-3UTR CAA 90 bp | CTCTCTATAGCTGTTTTCTTCCCTTGTCACCATCAGATTACATCTTTACACATTCTGTTTTCTGGATTCTaGTATCTCAGAACCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LSIAVFFPCHHQITSLHILFSGF*YLRTSS Trigger: AGAAGAGGTTCTGAGATACAAGAATCCAGAAAACAG...AATGTGTAAAGATGTAATCTGATGGTGACAAGGGAAGAAAACAGCTATAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS-3UTR CAA 90 bp | TGTCTACAAATATGCACTAGAAGTGGAATGAATAATCTGTCCTCATGGGAAAATAGAACCTCTTCTCTGTaGATAGAACAATTCATCACA | + |
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Preference number: 5 (lower is better) Translates to: CLQICTRSGMNNLSSWENRTSSL*IEQFIT Trigger: TGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCT...ATTTTCCCATGAGGACAGATTATTCATTCCACTTCTAGTGCATATTTGTAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 72 bp | GATTCATGCCCCCTCCTCTTGGCGTCAACCCAGGCCTaGTCTCTGTTATCTTTCTCAGGATCATACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DSCPLLLASTQA*SLLSFSGSYSS Trigger: GCTGCTGTATGATCCTGAGAAAGATAACAGAGACCAGGCCTGGGTTGACGCCAAGAGGAGGGGGCATGAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110713.10 |
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| CDS CAA 90 bp | AACAGCATCACTGTTTGGAACAGGCTGTTGTTTCTGACGTGGCCTTaGCAATCCAAAAGCATGATAACCCCTCCTCTTGGCGTCAACCCA | + |
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Preference number: 6 (lower is better) Translates to: NSITVWNRLLFLTWP*QSKSMITPPLGVNP Trigger: TGGGTTGACGCCAAGAGGAGGGGTTATCATGCTTTTGGATTGCAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAACAGTGATGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 72 bp | CATACAGGCTGGGCAATTCAGAACAGCATCACTGTTTaGAACAGGCTGTTGTTTCTGACGTGGCCTTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: HTGWAIQNSITV*NRLLFLTWPLQ Trigger: TTGCAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAACAGTGATGCTGTTCTGAATTGCCCAGCCTGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 72 bp | CCCACTTTGGCAACTCCTGTTCCCAGTGAGGATAACTaGTCCTCCATTGTCTTCATGGTGGAGTTTAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PTLATPVPSEDN*SSIVFMVEFSS Trigger: TGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGAGTTGCCAAAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162106.8 |
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| CDS CAA 72 bp | ACTGTTTGGAACAGGCTGTTGTTTCTGACGTGGCCTTaGCAATCCAAAAGCATGATAACCCCTCCTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: TVWNRLLFLTWP*QSKSMITPPLG Trigger: GCCAAGAGGAGGGGTTATCATGCTTTTGGATTGCAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CAA 90 bp | ACAGGCTGGGCAATTCAGAACAGCATCACTGTTTGGAACAGGCTGTaGTTTCTGACGTGGCCTTTGCAATCCAAAAGCATGATAACCCCT | + |
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Preference number: 6 (lower is better) Translates to: TGWAIQNSITVWNRL*FLTWPLQSKSMITP Trigger: AGGGGTTATCATGCTTTTGGATTGCAAAGGCCACGTCAGAAACAACAGCCTGTTCCAAACAGTGATGCTGTTCTGAATTGCCCAGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 72 bp | ACTCCTGAAGAAGACCCTGTTCCCAGTGAGGATAACTaGTCCTCCATTGTCTTCATGGTGGAGTTTAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TPEEDPVPSEDN*SSIVFMVEFSS Trigger: TGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAACAGGGTCTTCTTCAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110713.10 ENSMUST00000160085.2 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 72 bp | CATCTTCTTAGCACTCCGCCGTTTCCTCCTGTTTTCTaGATTCTTGTATCTCAGAACCTCTTCTCTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: HLLSTPPFPPVF*ILVSQNLFSVD Trigger: ATCAACAGAGAAGAGGTTCTGAGATACAAGAATCCAGAAAACAGGAGGAAACGGCGGAGTGCTAAGAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CAA 90 bp | CCTGGTCTCTGTTATCTTTCTCAGGATCATACAGCAGCTCATCGTTaGTTGGAATCCTGTGTTGTTTCTTCTTCTTCTTCTTGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: PGLCYLSQDHTAAHR*LESCVVSSSSSWSL Trigger: CAGTGACCAAGAAGAAGAAGAAGAAACAACACAGGATTCCAACAAACGATGAGCTGCTGTATGATCCTGAGAAAGATAACAGAGACCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 72 bp | TTCCCAGTGAGGATAACTGGTCCTCCATTGTCTTCATaGTGGAGTTTAGTTCAGCCTCCATTTCTTTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FPVRITGPPLSS*WSLVQPPFLFQ Trigger: TTGAAAAAGAAATGGAGGCTGAACTAAACTCCACCATGAAGACAATGGAGGACCAGTTATCCTCACTGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000110713.10 ENSMUST00000160085.2 ENSMUST00000161592.8 ENSMUST00000162106.8 ENSMUST00000163433.8 |
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| CDS CAA 90 bp | CTCATCTTCTTAGCACTCCGCCGTTTCCTCCTGTTTTCTGGATTCTaGTATCTCAGAACCTCTTCTCTGTTGATAGAACAATTCATCACA | + |
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Preference number: 6 (lower is better) Translates to: LIFLALRRFLLFSGF*YLRTSSLLIEQFIT Trigger: TGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCTGAGATACAAGAATCCAGAAAACAGGAGGAAACGGCGGAGTGCTAAGAAGATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CAA 90 bp | TTCCTCCTGTTTTCTGGATTCTTGTATCTCAGAACCTCTTCTCTGTaGATAGAACAATTCATCACAAACATTGCCCTGTACTGCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FLLFSGFLYLRTSSL*IEQFITNIALYCVL Trigger: CAAGACGCAGTACAGGGCAATGTTTGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCTGAGATACAAGAATCCAGAAAACAGGAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CCA 72 bp | ATCTTTCTCAGGATCATACAGCAGCTCATCGTTTGTTaGAATCCTGTGTTGTTTCTTCTTCTTCTTCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: IFLRIIQQLIVC*NPVLFLLLLLG Trigger: ACCAAGAAGAAGAAGAAGAAACAACACAGGATTCCAACAAACGATGAGCTGCTGTATGATCCTGAGAAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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| CDS CAA 72 bp | CAACCTTGTGTCTTAGTTAGGGCTTCCATTCCTGTTTaGTCCTCATCCTCAGAATCAGAATCAAAATATATC | + |
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Preference number: 6 (lower is better) Translates to: QPCVLVRASIPV*SSSSESESKYI Trigger: GATATATTTTGATTCTGATTCTGAGGATGAGGACAAAACAGGAATGGAAGCCCTAACTAAGACACAAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160085.2 |
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| CDS CAA 72 bp | TTTTCTGGATTCTTGTATCTCAGAACCTCTTCTCTGTaGATAGAACAATTCATCACAAACATTGCCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: FSGFLYLRTSSL*IEQFITNIALY Trigger: GTACAGGGCAATGTTTGTGATGAATTGTTCTATCAACAGAGAAGAGGTTCTGAGATACAAGAATCCAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110713.10 ENSMUST00000161592.8 ENSMUST00000163433.8 |
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