Pregenerated sensors for EAF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022838Ensembl transcript IDs: ENSMUST00000023537.6, ENSMUST00000075946.12, ENSMUST00000114825.3, ENSMUST00000114829.9
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGGGGCAGGTGTAGCAACTCAGGATTGGCTGGGCTGTGGTTGCTaGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACA | + |
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Preference number: 1 (lower is better) Translates to: SGAGVATQDWLGCGC*GDFLTLSQQPISQT Trigger: TGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGCAACCACAGCCCAGCCAATCCTGAGTTGCTACACCTGCCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR TCA 90 bp | CTCGAGAGGAAAGAGTTCCCAGTTTTTATAGGCCCTCAGGGGAGAAAGGAGAAGGCTGGGGAGATTTTCTaGCTCTTTCTCAGCAACCGA | + |
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Preference number: 2 (lower is better) Translates to: LERKEFPVFIGPQGRKEKAGEIF*LFLSNR Trigger: TCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGC...CTTCTCCTTTCTCCCCTGAGGGCCTATAAAAACTGGGAACTCTTTCCTCTCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGCACACACATGGGTCAAGGAACGGTCAAAACATTGGCAGACACACAGGTTCAGTGGACAGAGACTCTaGAATAGTGGATCTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: WAHTWVKERSKHWQTHRFSGQRL*NSGSAA Trigger: AGCTGCAGATCCACTATTCCAGAGTCTCTGTCCACT...GAACCTGTGTGTCTGCCAATGTTTTGACCGTTCCTTGACCCATGTGTGTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGAGAGGAAAGAGTTCCCAGTTTTTATAGGCCCTCAGGGGAGAAAGGAGAAGAGTGGACAGAGACTCTaGAATAGTGGATCTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LERKEFPVFIGPQGRKEKSGQRL*NSGSAA Trigger: AGCTGCAGATCCACTATTCCAGAGTCTCTGTCCACT...CTTCTCCTTTCTCCCCTGAGGGCCTATAAAAACTGGGAACTCTTTCCTCTCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCAAGGAACGGTCAAAACATTGGCAGACACACAGGTTCGAGGAGTGGCCAGATTTGTTAGCAATTCCTaGGGCAAGTTAAGTTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: GQGTVKTLADTQVRGVARFVSNS*GKLSSL Trigger: TAGGGAACTTAACTTGCCCCAGGAATTGCTAACAAA...TCTGGCCACTCCTCGAACCTGTGTGTCTGCCAATGTTTTGACCGTTCCTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CCA 90 bp | AAACAATGTCTATTCTCAAGAAATGGGTATGGGACGGGTACAAGGAAAGAGTCTCAACTCAGGATTGGCTaGGCTGTGGTTGCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KQCLFSRNGYGTGTRKESQLRIG*AVVAGE Trigger: CTCCCCAGCAACCACAGCCCAGCCAATCCTGAGTTG...AGACTCTTTCCTTGTACCCGTCCCATACCCATTTCTTGAGAATAGACATTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CCA 90 bp | AAACAATGTCTATTCTCAAGAAATGGGTATGGGACGGGTACAAGGAAAGAGTCTGGATTGGCTGGGCTGTaGTTGCTGGGGAGATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: KQCLFSRNGYGTGTRKESGLAGL*LLGRFS Trigger: AGAAAATCTCCCCAGCAACCACAGCCCAGCCAATCC...AGACTCTTTCCTTGTACCCGTCCCATACCCATTTCTTGAGAATAGACATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR TCA 90 bp | AAACAATGTCTATTCTCAAGAAATGGGTATGGGACGGGTACAAGGAAAGAGTCTGCTGGGGAGATTTTCTaGCTCTTTCTCAGCAACCGA | + |
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Preference number: 2 (lower is better) Translates to: KQCLFSRNGYGTGTRKESAGEIF*LFLSNR Trigger: TCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGC...AGACTCTTTCCTTGTACCCGTCCCATACCCATTTCTTGAGAATAGACATTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CCA 90 bp | AACAATGTCTATTCTCAAGAAATGGGTATGGGACGGGTACAAGGAAAGAGTCTGTTTGTTAGCAATTCCTaGGGCAAGTTAAGTTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: NNVYSQEMGMGRVQGKSLFVSNS*GKLSSL Trigger: TAGGGAACTTAACTTGCCCCAGGAATTGCTAACAAA...CAGACTCTTTCCTTGTACCCGTCCCATACCCATTTCTTGAGAATAGACATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR CCA 72 bp | TGGGCACACACATGGGTCAAGGAACGGTCAAAACATTaGCAGACACACAGGTTCGAGGAGTGGCCAGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: WAHTWVKERSKH*QTHRFEEWPEH Trigger: ATGCTCTGGCCACTCCTCGAACCTGTGTGTCTGCCAATGTTTTGACCGTTCCTTGACCCATGTGTGTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CAA 90 bp | CTCGAGAGGAAAGAGTTCCCAGTTTTTATAGGCCCTCAGGGGAGAAAGGAGAAGTGTAGCAACTCAGGATaGGCTGGGCTGTGGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LERKEFPVFIGPQGRKEKCSNSG*AGLWLL Trigger: CAGCAACCACAGCCCAGCCAATCCTGAGTTGCTACA...CTTCTCCTTTCTCCCCTGAGGGCCTATAAAAACTGGGAACTCTTTCCTCTCGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR CCA 72 bp | GGTGTAGCAACTCAGGATTGGCTGGGCTGTGGTTGCTaGGGAGATTTTCTGACTCTTTCTCAGCAACCGATA | + |
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Preference number: 3 (lower is better) Translates to: GVATQDWLGCGC*GDFLTLSQQPI Trigger: TATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGCAACCACAGCCCAGCCAATCCTGAGTTGCTACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR TCA 72 bp | AGGATTGGCTGGGCTGTGGTTGCTGGGGAGATTTTCTaGCTCTTTCTCAGCAACCGATATCACAAACACCTG | + |
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Preference number: 3 (lower is better) Translates to: RIGWAVVAGEIF*LFLSNRYHKHL Trigger: CAGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGCAACCACAGCCCAGCCAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CAA 90 bp | TGGGCACACACATGGGTCAAGGAACGGTCAAAACATTGGCAGACACACAGGTTCACACTGACATCTATCTaGCCAATTTCAGGGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: WAHTWVKERSKHWQTHRFTLTSI*PISGLL Trigger: CAGAAGCCCTGAAATTGGCAAGATAGATGTCAGTGT...GAACCTGTGTGTCTGCCAATGTTTTGACCGTTCCTTGACCCATGTGTGTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CAA 90 bp | CTCGAGAGGAAAGAGTTCCCAGTTTTTATAGGCCCTCAGGGGAGAAAGGAGAAGTTAGCATTTCACAATTaGGGGCAACAGTGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LERKEFPVFIGPQGRKEKLAFHN*GQQWTE Trigger: CTCTGTCCACTGTTGCCCCAAATTGTGAAATGCTAA...CTTCTCCTTTCTCCCCTGAGGGCCTATAAAAACTGGGAACTCTTTCCTCTCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACACCTGGCAATTAGCATTTCACAATTaGGGGCAACAGTGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LGRFSDSFSATDITNTWQLAFHN*GQQWTE Trigger: CTCTGTCCACTGTTGCCCCAAATTGTGAAATGCTAA...TTGCCAGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR-3UTR CAA 90 bp | GGTTGCTGGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACACCTACACTGACATCTATCTaGCCAATTTCAGGGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: GCWGDFLTLSQQPISQTPTLTSI*PISGLL Trigger: CAGAAGCCCTGAAATTGGCAAGATAGATGTCAGTGT...AGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR CCA 72 bp | CATTTCACAATTTGGGGCAACAGTGGACAGAGACTCTaGAATAGTGGATCTGCAGCTCATTTGTTAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: HFTIWGNSGQRL*NSGSAAHLLAI Trigger: AATTGCTAACAAATGAGCTGCAGATCCACTATTCCAGAGTCTCTGTCCACTGTTGCCCCAAATTGTGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR CAA 72 bp | GTGGGCACACACATGGGTCAAGGAACGGTCAAAACATaGGCAGACACACAGGTTCGAGGAGTGGCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VGTHMGQGTVKT*ADTQVRGVARA Trigger: TGCTCTGGCCACTCCTCGAACCTGTGTGTCTGCCAATGTTTTGACCGTTCCTTGACCCATGTGTGTGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR TCA 90 bp | GGTCAAGGAACGGTCAAAACATTGGCAGACACACAGGTTCGAGGAGTGGCCAGACTCACTGTCGCTTTCTaGCTCACTCAGCTGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GQGTVKTLADTQVRGVARLTVAF*LTQLQV Trigger: GACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAG...TCTGGCCACTCCTCGAACCTGTGTGTCTGCCAATGTTTTGACCGTTCCTTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR TCA 90 bp | ATACTGCTTCAGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTAACTTTCGCCTAGCTTaGGAACCCGCTCGCGACGGT | + |
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Preference number: 4 (lower is better) Translates to: ILLQSSLSLSDSLSCKSLNFRLA*EPARDG Trigger: ACCGTCGCGAGCGGGTTCTCAAGCTAGGCGAAAGTT...AAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACTGAAGCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR TCA 90 bp | AGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTCGTAAAGTACAGTAGCATCAGCCTCTaGAGTCCTGTACTGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPHCRFLTHSAASHFVKYSSISL*SPVLWP Trigger: GGGCCACAGTACAGGACTTCAGAGGCTGATGCTACT...GTACTTTACGAAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR GCA 90 bp | AGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTCGTAAAGTACAAGGCACAGCGCGGCTaGTTCTCGAAACTTTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: SPHCRFLTHSAASHFVKYKAQRG*FSKLSP Trigger: AGGCGAAAGTTTCGAGAAGCAGCCGCGCTGTGCCTT...GTACTTTACGAAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR TCA 90 bp | CTGGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACACCTGGCAACTCACTGTCGCTTTCTaGCTCACTCAGCTGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LGRFSDSFSATDITNTWQLTVAF*LTQLQV Trigger: GACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAG...TTGCCAGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR TCA 90 bp | ATACTGCTTCAGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTAGACATCTTCTCTTCTaGTGGAGAATGCTGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: ILLQSSLSLSDSLSCKSLRHLLF*WRMLYK Trigger: CTTGTACAGCATTCTCCATCAGAAGAGAAGATGTCT...AAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACTGAAGCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR GCA 90 bp | AGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTCGTAAAGTACGGCAGATTCCACATTTaGTGTTGCTGTTGTTCTAGT | + |
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Preference number: 4 (lower is better) Translates to: SPHCRFLTHSAASHFVKYGRFHI*CCCCSS Trigger: ACTAGAACAACAGCAACAGCAAATGTGGAATCTGCC...GTACTTTACGAAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR TCA 90 bp | GGTTGCTGGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACACCTAGACATCTTCTCTTCTaGTGGAGAATGCTGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: GCWGDFLTLSQQPISQTPRHLLF*WRMLYK Trigger: CTTGTACAGCATTCTCCATCAGAAGAGAAGATGTCT...AGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR GCA 90 bp | ATACTGCTTCAGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTTTCCACATTTGCTGTTaGTGTTGTTCTAGTCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ILLQSSLSLSDSLSCKSLFHICC*CCSSLY Trigger: GTACAGACTAGAACAACAGCAACAGCAAATGTGGAA...AAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACTGAAGCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR GCA 90 bp | AGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTCGTAAAGTACTCTTCTGATGGAGAATaGTGTACAAGATTGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SPHCRFLTHSAASHFVKYSSDGE*CTRLEV Trigger: GACTTCCAATCTTGTACAGCATTCTCCATCAGAAGA...GTACTTTACGAAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR TCA 90 bp | GTTCTGCTAACACTGACATCTATCTTGCCAATTTCAGGGCTTCTGTGTCCTTTTAGACATCTTCTCTTCTaGTGGAGAATGCTGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: VLLTLTSILPISGLLCPFRHLLF*WRMLYK Trigger: CTTGTACAGCATTCTCCATCAGAAGAGAAGATGTCT...AAAAGGACACAGAAGCCCTGAAATTGGCAAGATAGATGTCAGTGTTAGCAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| 3UTR CAA 72 bp | TCAGTGAAGCTAGTTCTGCTAACACTGACATCTATCTaGCCAATTTCAGGGCTTCTGTGTCCTTTTACATTC | + |
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Preference number: 4 (lower is better) Translates to: SVKLVLLTLTSI*PISGLLCPFTF Trigger: GAATGTAAAAGGACACAGAAGCCCTGAAATTGGCAAGATAGATGTCAGTGTTAGCAGAACTAGCTTCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR CCA 90 bp | AACAGTGGACAGAGACTCTGGAATAGTGGATCTGCAGCTCATTTGTTAGCAATTTCACAACTACTCATCTaGTCCATAAGACTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NSGQRLWNSGSAAHLLAISQLLI*SIRLAS Trigger: AGAAGCTAGTCTTATGGACCAGATGAGTAGTTGTGA...AATTGCTAACAAATGAGCTGCAGATCCACTATTCCAGAGTCTCTGTCCACTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR GCA 90 bp | GATTCTTACACATCTCACAAATGTTTTCTCTGTAGCTTGATACTGCTTCAGTCCTCACCTGTTCACCTTTaGCAACCTCAAGATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DSYTSHKCFLCSLILLQSSPVHL*QPQDFL Trigger: AAGGAAATCTTGAGGTTGGCAAAGGTGAACAGGTGA...GGACTGAAGCAGTATCAAGCTACAGAGAAAACATTTGTGAGATGTGTAAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS TCA 90 bp | TGTGGAAGGCACAGCGCGGCTGCTTCTCGAAACTTTCGCCTAGCTTaGGAACCCGCTCGCGACGGTCCAGGTATGCAAGTCCCGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: CGRHSAAASRNFRLA*EPARDGPGMQVPLV Trigger: GACCAGCGGGACTTGCATACCTGGACCGTCGCGAGCGGGTTCTCAAGCTAGGCGAAAGTTTCGAGAAGCAGCCGCGCTGTGCCTTCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS-3UTR CAA 90 bp | ATACTGCTTCAGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTGTCACCTGTTCACCTTaGCCAACCTCAAGATTTCCT | + |
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Preference number: 5 (lower is better) Translates to: ILLQSSLSLSDSLSCKSLVTCSP*PTSRFP Trigger: AGGAAATCTTGAGGTTGGCAAAGGTGAACAGGTGAC...AAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACTGAAGCAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR CAA 90 bp | GATTCTTACACATCTCACAAATGTTTTCTCTGTAGCTTGATACTGCTTCAGTCCAAACTTTCGCCTAGCTaGAGAACCCGCTCGCGACGG | + |
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Preference number: 5 (lower is better) Translates to: DSYTSHKCFLCSLILLQSKLSPS*RTRSRR Trigger: CCGTCGCGAGCGGGTTCTCAAGCTAGGCGAAAGTTT...GGACTGAAGCAGTATCAAGCTACAGAGAAAACATTTGTGAGATGTGTAAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS GCA 90 bp | TGCTGTACAAGATTGGAAGTCCTAGGCAGATTCCACATTTGCTGTTaGTGTTGTTCTAGTCTGTACTGGATTCTGCTACTCCCTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: CCTRLEVLGRFHICC*CCSSLYWILLLPST Trigger: AGTGGAAGGGAGTAGCAGAATCCAGTACAGACTAGAACAACAGCAACAGCAAATGTGGAATCTGCCTAGGACTTCCAATCTTGTACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS GCA 90 bp | GGAGAATGCTGTACAAGATTGGAAGTCCTAGGCAGATTCCACATTTaGTGTTGCTGTTGTTCTAGTCTGTACTGGATTCTGCTACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: GECCTRLEVLGRFHI*CCCCSSLYWILLLP Trigger: AGGGAGTAGCAGAATCCAGTACAGACTAGAACAACAGCAACAGCAAATGTGGAATCTGCCTAGGACTTCCAATCTTGTACAGCATTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS-3UTR CAA 90 bp | AGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTCGTAAAGTACTTTTTCACAGTGATGTaGCTGCTGAGCTTTTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: SPHCRFLTHSAASHFVKYFFTVM*LLSFSR Trigger: CCTAGAAAAGCTCAGCAGCAACATCACTGTGAAAAA...GTACTTTACGAAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS CCA 90 bp | CTAGGGTGCTCCGAGCTGTATTTCCTTGGACCCAAAGGAGAGAATTaGTCATCATCTTCAGAATCACTAGAACTATCCTCACTACTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LGCSELYFLGPKGEN*SSSSESLELSSLLE Trigger: TTCAAGTAGTGAGGATAGTTCTAGTGATTCTGAAGATGATGACCAATTCTCTCCTTTGGGTCCAAGGAAATACAGCTCGGAGCACCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 ENSMUST00000114829.9 |
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| CDS-3UTR CAA 90 bp | CTTCAGTCCTCACTGTCGCTTTCTGACTCACTCAGCTGCAAGTCACTTCGTAAATATTTGGAAGAGTTATaGTCACCTGTTCACCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: LQSSLSLSDSLSCKSLRKYLEEL*SPVHLC Trigger: GCAAAGGTGAACAGGTGACAATAACTCTTCCAAATA...TTTACGAAGTGACTTGCAGCTGAGTGAGTCAGAAAGCGACAGTGAGGACTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR CAA 90 bp | CTGGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACACCTGGCAAACCCAAAGGAGAGAATaGGTCATCATCTTCAGAATC | + |
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Preference number: 5 (lower is better) Translates to: LGRFSDSFSATDITNTWQTQRRE*VIIFRI Trigger: GATTCTGAAGATGATGACCAATTCTCTCCTTTGGGT...TTGCCAGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR CAA 90 bp | GGTTGCTGGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACACCTACCCAAAGGAGAGAATaGGTCATCATCTTCAGAATC | + |
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Preference number: 5 (lower is better) Translates to: GCWGDFLTLSQQPISQTPTQRRE*VIIFRI Trigger: GATTCTGAAGATGATGACCAATTCTCTCCTTTGGGT...AGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS GCA 90 bp | TCATCCATTAGAGACGTTGGAGACATCTTCTCTTCTGATGGAGAATaGTGTACAAGATTGGAAGTCCTAGGCAGATTCCACATTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSIRDVGDIFSSDGE*CTRLEVLGRFHICC Trigger: ACAGCAAATGTGGAATCTGCCTAGGACTTCCAATCTTGTACAGCATTCTCCATCAGAAGAGAAGATGTCTCCAACGTCTCTAATGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS-3UTR CAA 90 bp | TCTTACACATCTCACAAATGTTTTCTCTGTAGCTTGATACTGCTTCAGTCCTCAGGTCTCTTGGAACCTTaGAAAACTGTGACTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SYTSHKCFLCSLILLQSSGLLEP*KTVTGG Trigger: TCCACCAGTCACAGTTTTCAAAGGTTCCAAGAGACC...TGAGGACTGAAGCAGTATCAAGCTACAGAGAAAACATTTGTGAGATGTGTAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS-3UTR CAA 90 bp | GGTTGCTGGGGAGATTTTCTGACTCTTTCTCAGCAACCGATATCACAAACACCTAACTATCCTCACTACTaGAAGATGAAGAACTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: GCWGDFLTLSQQPISQTPNYPHY*KMKNFW Trigger: CCAAAAGTTCTTCATCTTCAAGTAGTGAGGATAGTT...AGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAGAAAATCTCCCCAGCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR CAA 90 bp | AGATCTAAACAATGTCTATTCTCAAGAAATGGGTATGGGACGGGTACAAGGAAACCGAGCTGTATTTCCTaGGACCCAAAGGAGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: RSKQCLFSRNGYGTGTRKPSCIS*DPKERI Trigger: AATTCTCTCCTTTGGGTCCAAGGAAATACAGCTCGG...TTTCCTTGTACCCGTCCCATACCCATTTCTTGAGAATAGACATTGTTTAGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS-3UTR CAA 90 bp | AAACAATGTCTATTCTCAAGAAATGGGTATGGGACGGGTACAAGGAAAGAGTCTAACTATCCTCACTACTaGAAGATGAAGAACTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: KQCLFSRNGYGTGTRKESNYPHY*KMKNFW Trigger: CCAAAAGTTCTTCATCTTCAAGTAGTGAGGATAGTT...AGACTCTTTCCTTGTACCCGTCCCATACCCATTTCTTGAGAATAGACATTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 |
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| CDS CAA 90 bp | GTGTGGAAGGCACAGCGCGGCTGCTTCTCGAAACTTTCGCCTAGCTaGAGAACCCGCTCGCGACGGTCCAGGTATGCAAGTCCCGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: VWKAQRGCFSKLSPS*RTRSRRSRYASPAG Trigger: ACCAGCGGGACTTGCATACCTGGACCGTCGCGAGCGGGTTCTCAAGCTAGGCGAAAGTTTCGAGAAGCAGCCGCGCTGTGCCTTCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS TCA 72 bp | CACAGCGCGGCTGCTTCTCGAAACTTTCGCCTAGCTTaGGAACCCGCTCGCGACGGTCCAGGTATGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: HSAAASRNFRLA*EPARDGPGMQV Trigger: GACTTGCATACCTGGACCGTCGCGAGCGGGTTCTCAAGCTAGGCGAAAGTTTCGAGAAGCAGCCGCGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS CAA 72 bp | GCACAGCGCGGCTGCTTCTCGAAACTTTCGCCTAGCTaGAGAACCCGCTCGCGACGGTCCAGGTATGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: AQRGCFSKLSPS*RTRSRRSRYAS Trigger: ACTTGCATACCTGGACCGTCGCGAGCGGGTTCTCAAGCTAGGCGAAAGTTTCGAGAAGCAGCCGCGCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS TCA 72 bp | GTGGTCCTGAAGTCGGTGACAAGTAGCATCAGCCTCTaGAGTCCTGTACTGTGGCCCAGCAGACATGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: VVLKSVTSSISL*SPVLWPSRHAR Trigger: CCTAGCATGTCTGCTGGGCCACAGTACAGGACTTCAGAGGCTGATGCTACTTGTCACCGACTTCAGGACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023537.6 ENSMUST00000075946.12 ENSMUST00000114825.3 ENSMUST00000114829.9 |
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| CDS GCA 72 bp | AGAGACGTTGGAGACATCTTCTCTTCTGATGGAGAATaGTGTACAAGATTGGAAGTCCTAGGCAGATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: RDVGDIFSSDGE*CTRLEVLGRFH Trigger: GTGGAATCTGCCTAGGACTTCCAATCTTGTACAGCATTCTCCATCAGAAGAGAAGATGTCTCCAACGTCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023537.6 ENSMUST00000075946.12 ENSMUST00000114825.3 ENSMUST00000114829.9 |
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| CDS GCA 72 bp | AGATTGGAAGTCCTAGGCAGATTCCACATTTGCTGTTaGTGTTGTTCTAGTCTGTACTGGATTCTGCTACTC | + |
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Preference number: 6 (lower is better) Translates to: RLEVLGRFHICC*CCSSLYWILLL Trigger: GAGTAGCAGAATCCAGTACAGACTAGAACAACAGCAACAGCAAATGTGGAATCTGCCTAGGACTTCCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS CAA 72 bp | CTCCGAGCTGTATTTCCTTGGACCCAAAGGAGAGAATaGGTCATCATCTTCAGAATCACTAGAACTATCCTC | + |
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Preference number: 6 (lower is better) Translates to: LRAVFPWTQRRE*VIIFRITRTIL Trigger: GAGGATAGTTCTAGTGATTCTGAAGATGATGACCAATTCTCTCCTTTGGGTCCAAGGAAATACAGCTCGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 ENSMUST00000114829.9 |
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| CDS CCA 72 bp | TCCGAGCTGTATTTCCTTGGACCCAAAGGAGAGAATTaGTCATCATCTTCAGAATCACTAGAACTATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SELYFLGPKGEN*SSSSESLELSS Trigger: TGAGGATAGTTCTAGTGATTCTGAAGATGATGACCAATTCTCTCCTTTGGGTCCAAGGAAATACAGCTCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 ENSMUST00000114829.9 |
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| CDS CCA 72 bp | CTTTTGGAATCTGATGAACTATCACAACTACTCATCTaGTCCATAAGACTAGCTTCTGCTTTCAGTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLESDELSQLLI*SIRLASAFSSL Trigger: AAGAGAACTGAAAGCAGAAGCTAGTCTTATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 ENSMUST00000114829.9 |
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| CDS CAA 72 bp | CTGTATTTCCTCTTTCAATATCATCCATTAGAGACGTaGGAGACATCTTCTCTTCTGATGGAGAATGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LYFLFQYHPLET*ETSSLLMENAV Trigger: TACAGCATTCTCCATCAGAAGAGAAGATGTCTCCAACGTCTCTAATGGATGATATTGAAAGAGGAAATACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023537.6 |
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| CDS CAA 90 bp | GTTGAACCTTCTATATTTGGAAGAGTTATTGTCACCTGTTCACCTTaGCCAACCTCAAGATTTCCTTCACAAGAAGTATCAATAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: VEPSIFGRVIVTCSP*PTSRFPSQEVSIEA Trigger: TGCTTCTATTGATACTTCTTGTGAAGGAAATCTTGAGGTTGGCAAAGGTGAACAGGTGACAATAACTCTTCCAAATATAGAAGGTTCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS GCA 72 bp | CTATATTTGGAAGAGTTATTGTCACCTGTTCACCTTTaGCAACCTCAAGATTTCCTTCACAAGAAGTATCAA | + |
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Preference number: 6 (lower is better) Translates to: LYLEELLSPVHL*QPQDFLHKKYQ Trigger: TTGATACTTCTTGTGAAGGAAATCTTGAGGTTGGCAAAGGTGAACAGGTGACAATAACTCTTCCAAATATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS CAA 72 bp | TCTATATTTGGAAGAGTTATTGTCACCTGTTCACCTTaGCCAACCTCAAGATTTCCTTCACAAGAAGTATCA | + |
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Preference number: 6 (lower is better) Translates to: SIFGRVIVTCSP*PTSRFPSQEVS Trigger: TGATACTTCTTGTGAAGGAAATCTTGAGGTTGGCAAAGGTGAACAGGTGACAATAACTCTTCCAAATATAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023537.6 ENSMUST00000114829.9 |
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| CDS CAA 90 bp | TCAGAATCACTAGAACTATCCTCACTACTTGAAGATGAAGAACTTTaGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATAAGA | + |
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Preference number: 6 (lower is better) Translates to: SESLELSSLLEDEEL*ESDELSQLLIWSIR Trigger: TCTTATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCTTCATCTTCAAGTAGTGAGGATAGTTCTAGTGATTCTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075946.12 ENSMUST00000114825.3 ENSMUST00000114829.9 |
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