Pregenerated sensors for EAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021890Ensembl transcript IDs: ENSMUST00000022446.7
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGGGGACAGCAAAGGCACAGCGACAGGAAGGAGTCCTTTGGTTaGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCT | + |
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Preference number: 1 (lower is better) Translates to: RRGQQRHSDRKESFG*HKDTPEKPSGRLHS Trigger: AGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAAGGACTCCTTCCTGTCGCTGTGCCTTTGCTGTCCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR GCA 90 bp | CTCCTGTCTGGATTCTCACCTGTGGAGCCTTGCTGCTGGCTAATGTaGTCAGAAGTTCTTCACCACATCCCTCTGATTTCTACCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLSGFSPVEPCCWLM*SEVLHHIPLISTLC Trigger: GCAGAGGGTAGAAATCAGAGGGATGTGGTGAAGAACTTCTGAGCACATTAGCCAGCAGCAAGGCTCCACAGGTGAGAATCCAGACAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR GCA 90 bp | TTCCATACTGCCCAACTCCTGTCTGGATTCTCACCTGTGGAGCCTTaGTGCTGGCTAATGTGCTCAGAAGTTCTTCACCACATCCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: FHTAQLLSGFSPVEP*CWLMCSEVLHHIPL Trigger: CAGAGGGATGTGGTGAAGAACTTCTGAGCACATTAGCCAGCAGCAAGGCTCCACAGGTGAGAATCCAGACAGGAGTTGGGCAGTATGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 90 bp | ATTTGTGCAGAGAGCAAAACCTGGAGCCATCTACAGAAGGACCTGTaGTGCTGGGTAAGCCGGGTGACTAGATCGTCTGAGGCACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ICAESKTWSHLQKDL*CWVSRVTRSSEAQK Trigger: TTTCTGTGCCTCAGACGATCTAGTCACCCGGCTTACCCAGCACCACAGGTCCTTCTGTAGATGGCTCCAGGTTTTGCTCTCTGCACAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR GCA 90 bp | CCAACAGCAGCACAAAGCAAACAGCTTCTAAAGACTGTTCCATACTaGCCAACTCCTGTCTGGATTCTCACCTGTGGAGCCTTGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: PTAAQSKQLLKTVPY*PTPVWILTCGALLL Trigger: CAGCAGCAAGGCTCCACAGGTGAGAATCCAGACAGGAGTTGGGCAGTATGGAACAGTCTTTAGAAGCTGTTTGCTTTGTGCTGCTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 90 bp | GCCCAGTGCCACATGCAAGTACTTCCTATGGCAACAGTCCCCAACTaGAATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: AQCHMQVLPMATVPN*NANTTALSTQTKAF Trigger: AAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCATTCCAGTTGGGGACTGTTGCCATAGGAAGTACTTGCATGTGGCACTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 90 bp | AGCAAACAGCTTCTAAAGACTGTTCCATACTGCCCAACTCCTGTCTaGATTCTCACCTGTGGAGCCTTGCTGCTGGCTAATGTGCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SKQLLKTVPYCPTPV*ILTCGALLLANVLR Trigger: TCTGAGCACATTAGCCAGCAGCAAGGCTCCACAGGTGAGAATCCAGACAGGAGTTGGGCAGTATGGAACAGTCTTTAGAAGCTGTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 90 bp | CCTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTaGAATGTTTCAGTTTACCCTCCACCCTTCACTAGTAGTTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: PAWALRTDFQLCLNA*NVSVYPPPFTSSCL Trigger: GAGACAACTACTAGTGAAGGGTGGAGGGTAAACTGAAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 90 bp | AAAGCTCAATTTATCAAGCCCAGTGCCACATGCAAGTACTTCCTATaGCAACAGTCCCCAACTGGAATGCCAACACCACAGCTCTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: KAQFIKPSATCKYFL*QQSPTGMPTPQLCL Trigger: TAGACAGAGCTGTGGTGTTGGCATTCCAGTTGGGGACTGTTGCCATAGGAAGTACTTGCATGTGGCACTGGGCTTGATAAATTGAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR TCA 90 bp | TGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTaGTCTGTATGGTGTGTCGACCATAAAGCTAATCTATATGACCTA | + |
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Preference number: 1 (lower is better) Translates to: WPHPSQFTSVSEWIS*SVWCVDHKANLYDL Trigger: TAGGTCATATAGATTAGCTTTATGGTCGACACACCATACAGATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 90 bp | ACACACACACAACTGACCCAAAGACTCTGCCAAGGTCAACTTCTATaGTCTGGTCAAACTAGGTCACAAACTTCCTTACCACTTAGTATC | + |
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Preference number: 1 (lower is better) Translates to: THTQLTQRLCQGQLL*SGQTRSQTSLPLSI Trigger: GATACTAAGTGGTAAGGAAGTTTGTGACCTAGTTTGACCAGACCATAGAAGTTGACCTTGGCAGAGTCTTTGGGTCAGTTGTGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 90 bp | TGTGCAACCCTGACTAGTGACCAGTTTCCAGCAAGAACATTTATTTaGAAATGGCACACAGCAAAAGGCAATCTTGTGATTCTCTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: CATLTSDQFPARTFI*KWHTAKGNLVILFY Trigger: ATAGAAGAGAATCACAAGATTGCCTTTTGCTGTGTGCCATTTCCAAATAAATGTTCTTGCTGGAAACTGGTCACTAGTCAGGGTTGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR GCA 90 bp | TCTCTAGTTTATCTGTATTGCATTTTCCCAATGGTTTTCAAAGATTaGCATGGCATCTCTGTAGAATTAGTCCTTCCACCTTGCCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLVYLYCIFPMVFKD*HGISVELVLPPCPS Trigger: ACTTGGGCAAGGTGGAAGGACTAATTCTACAGAGATGCCATGGCAATCTTTGAAAACCATTGGGAAAATGCAATACAGATAAACTAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGACAGAAGGACCTGTGGTaGTGGGTAAGCCGGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGQKDLW*WVSRVT Trigger: AGTCACCCGGCTTACCCAGCACCACAGGTCCTTCTG...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGCCCAGGGACAGTGACTaGCAGTTCCCTGCTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGPRDSD*QFPAVC Trigger: GCACACAGCAGGGAACTGCCAGTCACTGTCCCTGGG...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGACTACAGAAGGACCTGTaGTGCTGGGTAAGCCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGLQKDL*CWVSRV Trigger: CACCCGGCTTACCCAGCACCACAGGTCCTTCTGTAG...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGCAAACACCTCAGATGAGCTGAACGCGCACACACAGCTGGAACTGCCCTGCAACATCCTCCTGTaGCATGTGGTCCTGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: TKANTSDELNAHTQLELPCNILL*HVVLAD Trigger: ATCTGCCAGGACCACATGTCACAGGAGGATGTTGCA...GGGCAGTTCCAGCTGTGTGTGCGCGTTCAGCTCATCTGAGGTGTTTGCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR TCA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTCTTGCCCAGGGACAGTaGCTGGCAGTTCCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LHGHCVQISSFVSMPGMFLAQGQ*LAVPCC Trigger: ACAGCAGGGAACTGCCAGTCACTGTCCCTGGGCAAG...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGAACTCAGAAATCCACCTaGCTCTGCCTCCCGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGTQKST*LCLPSA Trigger: AGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGT...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGATGTGACATGTGGTCCTaGCAGATGGAGCTGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGCDMWS*QMELGL Trigger: AAGACCCAGCTCCATCTGCCAGGACCACATGTCACA...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR TCA 90 bp | GGCAATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTGATTTCACCACATCCCTCTaGTTTCTACCCTCTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: GNGPTHLSSLQSLSGSADFTTSL*FLPSAN Trigger: GTTAGCAGAGGGTAGAAATCAGAGGGATGTGGTGAA...ATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGTGCACACTCTGCATCTaGGCTTGTGCTGAGACGTGT | + |
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Preference number: 2 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGCTLCI*ACAETC Trigger: ACACGTCTCAGCACAAGCTCAGATGCAGAGTGTGCA...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR GCA 90 bp | GGCAATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTGATCACCTTCCTCCACTATaGAGGAGGAAAGAACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GNGPTHLSSLQSLSGSADHLPPL*RRKEQH Trigger: ATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTG...ATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGATCACCGGAGGATTTGTaGAGAGAGCAAAACCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGSPEDL*REQNLE Trigger: CTCCAGGTTTTGCTCTCTGCACAAATCCTCCGGTGA...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTTGGCCCTGGCTGTCCTaGAACTCAGAAATCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: LHGHCVQISSFVSMPGMFWPWLS*NSEIHL Trigger: CAGGTGGATTTCTGAGTTCCAGGACAGCCAGGGCCA...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGATTCTCTGTATGGCCCTaGCTGTCCTGGAACTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGFSVWP*LSWNSE Trigger: TTCTGAGTTCCAGGACAGCCAGGGCCATACAGAGAA...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CAA 90 bp | GATTCGGTAGAGACCTGCATGGGCACTGCGTACAGATTTCCAGCTTaGTCTCAATGCCTGGAATGTTTCAGTTTACCCTCCACCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: DSVETCMGTAYRFPA*SQCLECFSLPSTLH Trigger: GTGAAGGGTGGAGGGTAAACTGAAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAGGTCTCTACCGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGATGCTGCTGGCTAATGTaGTCAGAAGTTCTTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGCCWLM*SEVLHH Trigger: GTGGTGAAGAACTTCTGAGCACATTAGCCAGCAGCA...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTCAAGTTCCTGGAGCCTaGCACAGTCTGAACAGCGAA | + |
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Preference number: 2 (lower is better) Translates to: LHGHCVQISSFVSMPGMFQVPGA*HSLNSE Trigger: TTCGCTGTTCAGACTGTGGCAGGCTCCAGGAACTTG...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR TCA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGGGAACTGCCCGAGTCTaGACCCAAGCTGAATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKGTARV*TQAECQ Trigger: CTGGCATTCAGCTTGGGTTCAGACTCGGGCAGTTCC...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTGCAGAGAGCAAAACCTaGAGCCATCTACAGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LHGHCVQISSFVSMPGMFAESKT*SHLQKD Trigger: GTCCTTCTGTAGATGGCTCCAGGTTTTGCTCTCTGC...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGTTTAGTTCAAGTTCCTaGAGCCTGCCACAGTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGFSSSS*SLPQSE Trigger: TTCAGACTGTGGCAGGCTCCAGGAACTTGAACTAAA...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CAA 90 bp | ATAAATATCACACACACAACCAGTCTCTCAAAAGAGGGAAGGACTTaGGAATTTTCAAGTTTCCCTCTCACTCCAGCACGTCACCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: INITHTTSLSKEGRT*EFSSFPLTPARHRR Trigger: TCTGCGGTGACGTGCTGGAGTGAGAGGGAAACTTGAAAATTCCAAAGTCCTTCCCTCTTTTGAGAGACTGGTTGTGTGTGTGATATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR GCA 90 bp | TCCATGCCCTTAAAAGACTTGTATTTTACTGATAGAGACCACCCAGGCAAGCTGCAGGGTACACTGGTCTaGTTTTCATTAACAATGTTA | + |
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Preference number: 2 (lower is better) Translates to: SMPLKDLYFTDRDHPGKLQGTLV*FSLTML Trigger: TAACATTGTTAATGAAAAGCAGACCAGTGTACCCTG...CAGCTTGCCTGGGTGGTCTCTATCAGTAAAATACAAGTCTTTTAAGGGCATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CAA 90 bp | ATCTCTAGTTTATCTGTATTGCATTTTCCCAATGGTTTTCAAAGATaGCCATGGCATCTCTGTAGAATTAGTCCTTCCACCTTGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ISSLSVLHFPNGFQR*PWHLCRISPSTLPK Trigger: CTTGGGCAAGGTGGAAGGACTAATTCTACAGAGATGCCATGGCAATCTTTGAAAACCATTGGGAAAATGCAATACAGATAAACTAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGACATTTATTTGGAAATaGCACACAGCAAAAGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKTFIWK*HTAKGN Trigger: ATTGCCTTTTGCTGTGTGCCATTTCCAAATAAATGT...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR-3UTR CCA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGGCAAGAACATTTATTTaGAAATGGCACACAGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKARTFI*KWHTAK Trigger: TTTTGCTGTGTGCCATTTCCAAATAAATGTTCTTGC...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CAA 90 bp | AACAAGCTAACACGTGGCATTATACGAATCTCTAGTTTATCTGTATaGCATTTTCCCAATGGTTTTCAAAGATTGCCATGGCATCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: NKLTRGIIRISSLSV*HFPNGFQRLPWHLC Trigger: ACAGAGATGCCATGGCAATCTTTGAAAACCATTGGGAAAATGCAATACAGATAAACTAGAGATTCGTATAATGCCACGTGTTAGCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR TCA 72 bp | AGACTGAGCAGAGGGTATGGGTGCACACTCTGCATCTaGGCTTGTGCTGAGACGTGTAGGTGTGCTGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RLSRGYGCTLCI*ACAETCRCAAG Trigger: CCCAGCAGCACACCTACACGTCTCAGCACAAGCTCAGATGCAGAGTGTGCACCCATACCCTCTGCTCAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 72 bp | CAGCAAAGGCACAGCGACAGGAAGGAGTCCTTTGGTTaGCACAAGGATACCCCTGAGAAGCCATCTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: QQRHSDRKESFG*HKDTPEKPSGR Trigger: CCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAAGGACTCCTTCCTGTCGCTGTGCCTTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR CCA 72 bp | GAGAGCAAAACCTGGAGCCATCTACAGAAGGACCTGTaGTGCTGGGTAAGCCGGGTGACTAGATCGTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: ESKTWSHLQKDL*CWVSRVTRSSE Trigger: CTCAGACGATCTAGTCACCCGGCTTACCCAGCACCACAGGTCCTTCTGTAGATGGCTCCAGGTTTTGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR TCA 72 bp | GATGGATCTGCACAAAAGCAAACACCTCAGATGAGCTaGACGCGCACACACAGCTGGAACTGCCCGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: DGSAQKQTPQMS*TRTHSWNCPSL Trigger: CAGACTCGGGCAGTTCCAGCTGTGTGTGCGCGTTCAGCTCATCTGAGGTGTTTGCTTTTGTGCAGATCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR TCA 72 bp | CTAGGGATGGATCTGCACAAAAGCAAACACCTCAGATaGGCTGAACGCGCACACACAGCTGGAACTGCCCGA | + |
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Preference number: 3 (lower is better) Translates to: LGMDLHKSKHLR*AERAHTAGTAR Trigger: TCGGGCAGTTCCAGCTGTGTGTGCGCGTTCAGCTCATCTGAGGTGTTTGCTTTTGTGCAGATCCATCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR GCA 72 bp | GCCCAACTCCTGTCTGGATTCTCACCTGTGGAGCCTTaGTGCTGGCTAATGTGCTCAGAAGTTCTTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: AQLLSGFSPVEP*CWLMCSEVLHH Trigger: GTGGTGAAGAACTTCTGAGCACATTAGCCAGCAGCAAGGCTCCACAGGTGAGAATCCAGACAGGAGTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR TCA 72 bp | GCAATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTaGGTGGATCAGCTGATCTGTATGGTGTGTCGACCA | + |
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Preference number: 3 (lower is better) Translates to: AMAPPISVHFSL*VDQLICMVCRP Trigger: TGGTCGACACACCATACAGATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR TCA 72 bp | CAGGAAGGAGTCCTTTGGTTGGCACAAGGATACCCCTaGGAAGCCATCTGGGAGGCTACATTCTGGATTTCC | + |
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Preference number: 3 (lower is better) Translates to: QEGVLWLAQGYP*EAIWEATFWIS Trigger: GGAAATCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAAGGACTCCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| 3UTR GCA 72 bp | GCAAGTACTTCCTATGGCAACAGTCCCCAACTGGAATaGCAACACCACAGCTCTGTCTACACAAACCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASTSYGNSPQLE*QHHSSVYTNQG Trigger: GCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCATTCCAGTTGGGGACTGTTGCCATAGGAAGTACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTCACAAACCAAGGCTTTaGGAGAAAAGCGGGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LHGHCVQISSFVSMPGMFHKPRL*EKSGAR Trigger: CCTTGCCCCGCTTTTCTCCAAAAGCCTTGGTTTGTG...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR TCA 72 bp | CAACTCAAGTCACCCAGTCACAACCCTCACCTTCCCTaGGCTGTCATTACCAAAGAGGGTTGGTTGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QLKSPSHNPHLP*AVITKEGWLVC Trigger: ACAAACCAACCAACCCTCTTTGGTAATGACAGCTCAGGGAAGGTGAGGGTTGTGACTGGGTGACTTGAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR GCA 72 bp | GTCATTGACAGATTCGGTAGAGACCTGCATGGGCACTaGGTACAGATTTCCAGCTTTGTCTCAATGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VIDRFGRDLHGH*VQISSFVSMPG Trigger: TCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAGGTCTCTACCGAATCTGTCAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CCA 72 bp | CTTCTAAAGACTGTTCCATACTGCCCAACTCCTGTCTaGATTCTCACCTGTGGAGCCTTGCTGCTGGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLKTVPYCPTPV*ILTCGALLLAN Trigger: ATTAGCCAGCAGCAAGGCTCCACAGGTGAGAATCCAGACAGGAGTTGGGCAGTATGGAACAGTCTTTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CCA 72 bp | CACATGCAAGTACTTCCTATGGCAACAGTCCCCAACTaGAATGCCAACACCACAGCTCTGTCTACACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: HMQVLPMATVPN*NANTTALSTQT Trigger: GGTTTGTGTAGACAGAGCTGTGGTGTTGGCATTCCAGTTGGGGACTGTTGCCATAGGAAGTACTTGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR TCA 72 bp | GGGCTTACCCATAGGTTGAAAGAAATGAAGAGCTTGTaGAATAGGCGCTCTGGAGAGAGGTTTAGAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLTHRLKEMKSL*NRRSGERFRVG Trigger: ACCCACTCTAAACCTCTCTCCAGAGCGCCTATTTCACAAGCTCTTCATTTCTTTCAACCTATGGGTAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR GCA 72 bp | CAGTCTGAACAGCGAAGAGCAGTAAAAACAGTTCAATaGCCACATCTGGTGACAACTCAAGTCACCCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSEQRRAVKTVQ*PHLVTTQVTQS Trigger: TGACTGGGTGACTTGAGTTGTCACCAGATGTGGGCATTGAACTGTTTTTACTGCTCTTCGCTGTTCAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CCA 72 bp | AATTATCAGTTTGCTTTAAATAGGTTCCACCTGCCATaGATCCATAGAGCATCTCCCAGTGGGCTGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: NYQFALNRFHLP*IHRASPSGLRL Trigger: CAGTCTCAGCCCACTGGGAGATGCTCTATGGATCCATGGCAGGTGGAACCTATTTAAAGCAAACTGATAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGATGAAGATATGGATTTaGAGTATCCTAGACCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKMKIWI*SILDQG Trigger: ACCCTGGTCTAGGATACTCAAAATCCATATCTTCAT...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGAGCAAGAACATTTATTaGGAAATGGCACACAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKSKNIY*EMAHSK Trigger: TTTGCTGTGTGCCATTTCCAAATAAATGTTCTTGCT...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR TCA 72 bp | TTATTTGGAAATGGCACACAGCAAAAGGCAATCTTGTaGTTCTCTTCTATAAAAATAACCCACGAGACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFGNGTQQKAIL*FSSIKITHETG Trigger: CCCAGTCTCGTGGGTTATTTTTATAGAAGAGAATCACAAGATTGCCTTTTGCTGTGTGCCATTTCCAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR GCA 72 bp | TATCTGTATTGCATTTTCCCAATGGTTTTCAAAGATTaGCATGGCATCTCTGTAGAATTAGTCCTTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: YLYCIFPMVFKD*HGISVELVLPP Trigger: AGGTGGAAGGACTAATTCTACAGAGATGCCATGGCAATCTTTGAAAACCATTGGGAAAATGCAATACAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR GCA 72 bp | CACGTGGCATTATACGAATCTCTAGTTTATCTGTATTaGATTTTCCCAATGGTTTTCAAAGATTGCCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: HVALYESLVYLY*IFPMVFKDCHG Trigger: GCCATGGCAATCTTTGAAAACCATTGGGAAAATGCAATACAGATAAACTAGAGATTCGTATAATGCCACGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | GGCAATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTGATGGGCTCGGAACGGCATaGGTGGAGGTGGAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNGPTHLSSLQSLSGSADGLGTA*VEVEGV Trigger: CACCCCCTCCACCTCCACCCATGCCGTTCCGAGCCC...ATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | GGCAATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTGATAGCTGGAGGCTTCGTTaGGGCTCGGAACGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNGPTHLSSLQSLSGSADSWRLR*GSERHG Trigger: CCCATGCCGTTCCGAGCCCCAACGAAGCCTCCAGCT...ATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | AATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTGATCTGTTCCTTGGGGCCGGCTaGTTCCATTGGCCACCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGPTHLSSLQSLSGSADLFLGAG*FHWPPQ Trigger: CTGCGGTGGCCAATGGAACCAGCCGGCCCCAAGGAA...CAGATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CAA 72 bp | GGGGACAGCAAAGGCACAGCGACAGGAAGGAGTCCTTaGGTTGGCACAAGGATACCCCTGAGAAGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDSKGTATGRSP*VGTRIPLRSHL Trigger: CAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAAGGACTCCTTCCTGTCGCTGTGCCTTTGCTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGACAGGGATTTCCTAGGATATATTCATTCAGACCACAGAGATGGGCAGGTAGGGCTGCTGGTGTaGGGGCTGGGGAGGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKDRDFLGYIHSDHRDGQVGLLV*GLGRRG Trigger: GCCTCGCCTCCCCAGCCCTCACACCAGCAGCCCTAC...CTGCCCATCTCTGTGGTCTGAATGAATATATCCTAGGAAATCCCTGTCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGCAACTGGGGCTCAGGTaGGGGGTTATCCTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGQLGLR*GVILQG Trigger: CCCCTGAAGGATAACCCCTCACCTGAGCCCCAGTTG...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGAGCGTGTTCATGAGCTaGGAGCTTCCTTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGSVFMS*ELPWGR Trigger: CCGGCCCCAAGGAAGCTCTCAGCTCATGAACACGCT...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR GCA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGGCCATTGTCTTCGCCTaGGCTGCTGGAGCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGAIVFA*AAGAVV Trigger: GACGACAGCTCCAGCAGCGCAGGCGAAGACAATGGC...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | TCCATGCCCTTAAAAGACTTGTATTTTACTGATAGAGACCACCCAGGCAAGCTGGCCGGCTGGTTCCATTaGCCACCGCAGGCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SMPLKDLYFTDRDHPGKLAGWFH*PPQACC Trigger: ACAGCAGGCCTGCGGTGGCCAATGGAACCAGCCGGC...CAGCTTGCCTGGGTGGTCTCTATCAGTAAAATACAAGTCTTTTAAGGGCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CAA 72 bp | TGCCCAACTCCTGTCTGGATTCTCACCTGTGGAGCCTaGCTGCTGGCTAATGTGCTCAGAAGTTCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CPTPVWILTCGA*LLANVLRSSSP Trigger: TGGTGAAGAACTTCTGAGCACATTAGCCAGCAGCAAGGCTCCACAGGTGAGAATCCAGACAGGAGTTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR GCA 90 bp | TCCATGCCCTTAAAAGACTTGTATTTTACTGATAGAGACCACCCAGGCAAGCTGTGGCCACCGCAGGCCTaGTGTTGTAGGGCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMPLKDLYFTDRDHPGKLWPPQA*CCRAAG Trigger: ACCAGCAGCCCTACAACAGCAGGCCTGCGGTGGCCA...CAGCTTGCCTGGGTGGTCTCTATCAGTAAAATACAAGTCTTTTAAGGGCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGTCGGAACGGCATGGGTaGAGGTGGAGGGGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKSERHG*RWRGWL Trigger: CAGCCACCCCCTCCACCTCCACCCATGCCGTTCCGA...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR GCA 90 bp | TCCATGCCCTTAAAAGACTTGTATTTTACTGATAGAGACCACCCAGGCAAGCTGCAGAGTCGGAGGAGCTaGTCCCACTGCTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMPLKDLYFTDRDHPGKLQSRRS*SHCCCS Trigger: TGAGCAGCAGCAGTGGGAGCAGCTCCTCCGACTCTG...CAGCTTGCCTGGGTGGTCTCTATCAGTAAAATACAAGTCTTTTAAGGGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR TCA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGCTTGTCTTCTTGACCTaGATGCTGCTGCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGLVFLT*MLLLSF Trigger: GAAGCTGAGCAGCAGCATTCAGGTCAAGAAGACAAG...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGATCTCCTTTGCCAACCTaGAGTTCTCCTTCACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGSPLPT*SSPSQE Trigger: TTCCTGTGAAGGAGAACTCCAGGTTGGCAAAGGAGA...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CAA 72 bp | GAGACCTGCATGGGCACTGCGTACAGATTTCCAGCTTaGTCTCAATGCCTGGAATGTTTCAGTTTACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETCMGTAYRFPA*SQCLECFSLPS Trigger: GGAGGGTAAACTGAAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAGGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR GCA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTCTGCTGCTGCTCATCTaGTCAATAATGTCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHGHCVQISSFVSMPGMFLLLLI*SIMSTS Trigger: CGAGGTGGACATTATTGAGCAGATGAGCAGCAGCAG...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGAGTTTTGGGTCCAGCTaGAGGCTTCGTTGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKSFGSS*RLRWGS Trigger: CGAGCCCCAACGAAGCCTCCAGCTGGACCCAAAACT...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR GCA 90 bp | TCCATGCCCTTAAAAGACTTGTATTTTACTGATAGAGACCACCCAGGCAAGCTGCCAGACTCACTTAGCTaGAGGTCATTTCTGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SMPLKDLYFTDRDHPGKLPDSLS*RSFLSV Trigger: CACGCTCAGAAATGACCTGCAGCTAAGTGAGTCTGG...CAGCTTGCCTGGGTGGTCTCTATCAGTAAAATACAAGTCTTTTAAGGGCATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGACAGGGATTTCCTAGGATATATTCATTCAGACCACAGAGATGGGCAGTTGATGTCATCCAACTaGGGCTCAGGTGAGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QKDRDFLGYIHSDHRDGQLMSSN*GSGEGL Trigger: TAACCCCTCACCTGAGCCCCAGTTGGATGACATCAA...CTGCCCATCTCTGTGGTCTGAATGAATATATCCTAGGAAATCCCTGTCTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CAA 72 bp | ACACACACAACCAGTCTCTCAAAAGAGGGAAGGACTTaGGAATTTTCAAGTTTCCCTCTCACTCCAGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: THTTSLSKEGRT*EFSSFPLTPAR Trigger: ACGTGCTGGAGTGAGAGGGAAACTTGAAAATTCCAAAGTCCTTCCCTCTTTTGAGAGACTGGTTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CCA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGTGCTCCATTCGAGCTTaGATTTTACTGCTTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKCSIRA*ILLLPS Trigger: TGAGGGAAGCAGTAAAATCCAAGCTCGAATGGAGCA...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGACAGGGATTTCCTAGGATATATTCATTCAGACCACAGAGATGGGCAGACAGGAAGTGTCTATTaGTGCTGGCTTAAAATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKDRDFLGYIHSDHRDGQTGSVY*CWLKIV Trigger: TACGATTTTAAGCCAGCATCAATAGACACTTCCTGT...CTGCCCATCTCTGTGGTCTGAATGAATATATCCTAGGAAATCCCTGTCTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CAA 72 bp | TTATCTGTATTGCATTTTCCCAATGGTTTTCAAAGATaGCCATGGCATCTCTGTAGAATTAGTCCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSVLHFPNGFQR*PWHLCRISPST Trigger: GGTGGAAGGACTAATTCTACAGAGATGCCATGGCAATCTTTGAAAACCATTGGGAAAATGCAATACAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CAA 72 bp | ACACGTGGCATTATACGAATCTCTAGTTTATCTGTATaGCATTTTCCCAATGGTTTTCAAAGATTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGIIRISSLSV*HFPNGFQRLPW Trigger: CCATGGCAATCTTTGAAAACCATTGGGAAAATGCAATACAGATAAACTAGAGATTCGTATAATGCCACGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| 3UTR CAA 72 bp | AAAGTTTCTGTTCCTTGCCAAGTGGAAAGATCCAGTTaGGCTGTTCTTAATACATATCTATCTACAAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KVSVPCQVERSS*AVLNTYLSTKQ Trigger: TTGTTTTGTAGATAGATATGTATTAAGAACAGCCAAACTGGATCTTTCCACTTGGCAAGGAACAGAAACTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS GCA 90 bp | GTGAGGGCTGGGGAGGCGAGGCTGGGCCATTGTCTTCGCCTGCGCTaGTGGAGCTGTCGTCGTCACTTCCCGAGGAGCTCTCAGAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VRAGEARLGHCLRLR*WSCRRHFPRSSQSR Trigger: CCGACTCTGAGAGCTCCTCGGGAAGTGACGACGACAGCTCCAGCAGCGCAGGCGAAGACAATGGCCCAGCCTCGCCTCCCCAGCCCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS CCA 90 bp | AGGGCTGGGGAGGCGAGGCTGGGCCATTGTCTTCGCCTGCGCTGCTaGAGCTGTCGTCGTCACTTCCCGAGGAGCTCTCAGAGTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAGEARLGHCLRLRC*SCRRHFPRSSQSRR Trigger: CCTCCGACTCTGAGAGCTCCTCGGGAAGTGACGACGACAGCTCCAGCAGCGCAGGCGAAGACAATGGCCCAGCCTCGCCTCCCCAGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS TCA 90 bp | CCAGACTCACTTAGCTGCAGGTCATTTCTGAGCGTGTTCATGAGCTaGGAGCTTCCTTGGGGCCGGCTGGTTCCATTGGCCACCGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PDSLSCRSFLSVFMS*ELPWGRLVPLATAG Trigger: GCCTGCGGTGGCCAATGGAACCAGCCGGCCCCAAGGAAGCTCTCAGCTCATGAACACGCTCAGAAATGACCTGCAGCTAAGTGAGTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CAA 90 bp | GGCAATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTGATCAGCTGGAGGCTTCGTaGGGGCTCGGAACGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GNGPTHLSSLQSLSGSADQLEAS*GLGTAW Trigger: CCATGCCGTTCCGAGCCCCAACGAAGCCTCCAGCTG...ATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CAA 90 bp | AATGGCCCCACCCATCTCAGTTCACTTCAGTCTCTGAGTGGATCAGCTGATCTGGGCGAGGCTGGGCCATaGTCTTCGCCTGCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NGPTHLSSLQSLSGSADLGEAGP*SSPALL Trigger: CAGCAGCGCAGGCGAAGACAATGGCCCAGCCTCGCC...CAGATCAGCTGATCCACTCAGAGACTGAAGTGAACTGAGATGGGTGGGGCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CAA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTGGCCGGCTGGTTCCATaGGCCACCGCAGGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHGHCVQISSFVSMPGMFGRLVP*ATAGLL Trigger: CAGCAGGCCTGCGGTGGCCAATGGAACCAGCCGGCC...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS CCA 90 bp | ACAGTCTTTCTGATAGGGCCGCTTGTTCCCTTTGAACACCGTCATTaGCGGCGTGGACCCAGGGATGTGTGGCAGCGTAATGGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVFLIGPLVPFEHRH*RRGPRDVWQRNGDF Trigger: GAAGTCACCATTACGCTGCCACACATCCCTGGGTCCACGCCGCCAATGACGGTGTTCAAAGGGAACAAGCGGCCCTATCAGAAAGACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
||
| CDS-3UTR CAA 90 bp | ATGCCAACACCACAGCTCTGTCTACACAAACCAAGGCTTTTGGAGAAAAGCGGGTTCAGGGGAGAAGTTTaGGGTCCAGCTGGAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MPTPQLCLHKPRLLEKSGFRGEV*GPAGGF Trigger: GAAGCCTCCAGCTGGACCCAAAACTTCTCCCCTGAA...CCCGCTTTTCTCCAAAAGCCTTGGTTTGTGTAGACAGAGCTGTGGTGTTGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS-3UTR CAA 90 bp | TTTGGTTGGCACAAGGATACCCCTGAGAAGCCATCTGGGAGGCTACATTCTGGAGTGACTTCATCTCCTTaGCCAACCTGGAGTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: FGWHKDTPEKPSGRLHSGVTSSP*PTWSSP Trigger: AGGAGAACTCCAGGTTGGCAAAGGAGATGAAGTCAC...TCCAGAATGTAGCCTCCCAGATGGCTTCTCAGGGGTATCCTTGTGCCAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS-3UTR CAA 90 bp | CTGCATGGGCACTGCGTACAGATTTCCAGCTTTGTCTCAATGCCTGGAATGTTTGCCCTCAGCTCTCTTTaGATGTCATCCAACTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LHGHCVQISSFVSMPGMFALSSL*MSSNWG Trigger: GCCCCAGTTGGATGACATCAAAAGAGAGCTGAGGGC...AAACATTCCAGGCATTGAGACAAAGCTGGAAATCTGTACGCAGTGCCCATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS TCA 90 bp | ATCTCCTTTGCCAACCTGGAGTTCTCCTTCACAGGAAGTGTCTATTaGTGCTGGCTTAAAATCGTAGCGAATCGTGTGGAAGGAGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: ISFANLEFSFTGSVY*CWLKIVANRVEGGP Trigger: CGGGCCTCCTTCCACACGATTCGCTACGATTTTAAGCCAGCATCAATAGACACTTCCTGTGAAGGAGAACTCCAGGTTGGCAAAGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS-3UTR CAA 90 bp | ACCACCTTCCTCCACTATGCAGGAGGAAAGAACAGCATTGTTAATGTCTTAAAGGAGCTGAGAGCTTCCTaGGGGCCGGCTGGTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: TTFLHYAGGKNSIVNVLKELRAS*GPAGSI Trigger: AATGGAACCAGCCGGCCCCAAGGAAGCTCTCAGCTC...CTTTAAGACATTAACAATGCTGTTCTTTCCTCCTGCATAGTGGAGGAAGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS-3UTR CAA 90 bp | CAGAAAGACAGGGATTTCCTAGGATATATTCATTCAGACCACAGAGATGGGCAGCTGCTCCATTCGAGCTaGGATTTTACTGCTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: QKDRDFLGYIHSDHRDGQLLHSS*DFTASL Trigger: GAGGGAAGCAGTAAAATCCAAGCTCGAATGGAGCAG...CTGCCCATCTCTGTGGTCTGAATGAATATATCCTAGGAAATCCCTGTCTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS GCA 72 bp | GGGCTGGGGAGGCGAGGCTGGGCCATTGTCTTCGCCTaGGCTGCTGGAGCTGTCGTCGTCACTTCCCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GLGRRGWAIVFA*AAGAVVVTSRG Trigger: TCCTCGGGAAGTGACGACGACAGCTCCAGCAGCGCAGGCGAAGACAATGGCCCAGCCTCGCCTCCCCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS GCA 72 bp | GGGGAGGCGAGGCTGGGCCATTGTCTTCGCCTGCGCTaGTGGAGCTGTCGTCGTCACTTCCCGAGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GEARLGHCLRLR*WSCRRHFPRSS Trigger: AGAGCTCCTCGGGAAGTGACGACGACAGCTCCAGCAGCGCAGGCGAAGACAATGGCCCAGCCTCGCCTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS CCA 72 bp | CAGGGGAGAAGTTTTGGGTCCAGCTGGAGGCTTCGTTaGGGCTCGGAACGGCATGGGTGGAGGTGGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: QGRSFGSSWRLR*GSERHGWRWRG Trigger: CCCCCTCCACCTCCACCCATGCCGTTCCGAGCCCCAACGAAGCCTCCAGCTGGACCCAAAACTTCTCCCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS CCA 72 bp | GAGGCGAGGCTGGGCCATTGTCTTCGCCTGCGCTGCTaGAGCTGTCGTCGTCACTTCCCGAGGAGCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: EARLGHCLRLRC*SCRRHFPRSSQ Trigger: CTGAGAGCTCCTCGGGAAGTGACGACGACAGCTCCAGCAGCGCAGGCGAAGACAATGGCCCAGCCTCGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS GCA 72 bp | GGTGGCTGTGACGGCTGTGGGGGACGAGCGGGCTGCTaGTCCATTCGAGCTTGGATTTTACTGCTTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GGCDGCGGRAGC*SIRAWILLLPS Trigger: TGAGGGAAGCAGTAAAATCCAAGCTCGAATGGAGCAGCAGCCCGCTCGTCCCCCACAGCCGTCACAGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS TCA 72 bp | GCACACAGTCTTTCTGATAGGGCCGCTTGTTCCCTTTaGACACCGTCATTGGCGGCGTGGACCCAGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: AHSLSDRAACSL*TPSLAAWTQGC Trigger: ACATCCCTGGGTCCACGCCGCCAATGACGGTGTTCAAAGGGAACAAGCGGCCCTATCAGAAAGACTGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS TCA 72 bp | CTTAGCTGCAGGTCATTTCTGAGCGTGTTCATGAGCTaGGAGCTTCCTTGGGGCCGGCTGGTTCCATTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSCRSFLSVFMS*ELPWGRLVPLA Trigger: GGCCAATGGAACCAGCCGGCCCCAAGGAAGCTCTCAGCTCATGAACACGCTCAGAAATGACCTGCAGCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS CCA 72 bp | TGTGGGGGACGAGCGGGCTGCTGCTCCATTCGAGCTTaGATTTTACTGCTTCCCTCAGCTCTTGTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CGGRAGCCSIRA*ILLLPSALVFL Trigger: CAAGAAGACAAGAGCTGAGGGAAGCAGTAAAATCCAAGCTCGAATGGAGCAGCAGCCCGCTCGTCCCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS CAA 72 bp | CTGTGGGGGACGAGCGGGCTGCTGCTCCATTCGAGCTaGGATTTTACTGCTTCCCTCAGCTCTTGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LWGTSGLLLHSS*DFTASLSSCLL Trigger: AAGAAGACAAGAGCTGAGGGAAGCAGTAAAATCCAAGCTCGAATGGAGCAGCAGCCCGCTCGTCCCCCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS CAA 90 bp | GTGGACCCAGGGATGTGTGGCAGCGTAATGGTGACTTCATCTCCTTaGCCAACCTGGAGTTCTCCTTCACAGGAAGTGTCTATTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: VDPGMCGSVMVTSSP*PTWSSPSQEVSIDA Trigger: AGCATCAATAGACACTTCCTGTGAAGGAGAACTCCAGGTTGGCAAAGGAGATGAAGTCACCATTACGCTGCCACACATCCCTGGGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS CAA 72 bp | GGGATGTGTGGCAGCGTAATGGTGACTTCATCTCCTTaGCCAACCTGGAGTTCTCCTTCACAGGAAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GMCGSVMVTSSP*PTWSSPSQEVS Trigger: AGACACTTCCTGTGAAGGAGAACTCCAGGTTGGCAAAGGAGATGAAGTCACCATTACGCTGCCACACATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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| CDS TCA 72 bp | GCCAACCTGGAGTTCTCCTTCACAGGAAGTGTCTATTaGTGCTGGCTTAAAATCGTAGCGAATCGTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ANLEFSFTGSVY*CWLKIVANRVE Trigger: TTCCACACGATTCGCTACGATTTTAAGCCAGCATCAATAGACACTTCCTGTGAAGGAGAACTCCAGGTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022446.7 |
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