RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for E2F8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046179

Ensembl transcript IDs: ENSMUST00000058745.15, ENSMUST00000119223.2

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGTGTGTATGGGTGGGTaGACTCGCATGCGCATGTGT +
Preference number: 2 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNVCMGG*TRMRMC
Trigger: ACACATGCGCATGCGAGTGCACCCACCCATACACAC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
3UTR-3UTR GCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGTGGGTGCACTCGCATaGGCATGTGTGTATATCTGC +
Preference number: 2 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGVGALA*ACVYIC
Trigger: GCAGATATACACACATGCGCATGCGAGTGCACCCAC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
3UTR-3UTR TCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATTTGTGCAAAAAGTTTaGGCAGGTGCTGTGTTAGGT +
Preference number: 2 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKFVQKV*AGAVLG
Trigger: ACCTAACACAGCACCTGCTCAAACTTTTTGCACAAA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
3UTR-3UTR GCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATCTTGTACAAATGTGTaGGCATGTATGAGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKSCTNV*ACMSVC
Trigger: ACACACACTCATACATGCGCACACATTTGTACAAGA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
3UTR-3UTR CAA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACCTTTGTGCAAAAAGTTaGAGCAGGTGCTGTGTTAGG +
Preference number: 3 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNLCAKS*SRCCVR
Trigger: CCTAACACAGCACCTGCTCAAACTTTTTGCACAAAG...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
3UTR-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATACACAGCATTTCCTTaGTGCAAAAAGTTTGAGCAG +
Preference number: 3 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKYTAFP*CKKFEQ
Trigger: CTGCTCAAACTTTTTGCACAAAGGAAATGCTGTGTA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGGGATACCGGGACTGTaGCAGCTCCAGGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPGIPGL*QLQAPG
Trigger: GCCCGGGGCCTGGAGCTGGCACAGTCCCGGTATCCC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGCACGCCCGGGGAGATaGGTCCCAAGTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPARPGR*VPSAAG
Trigger: CCCTGCAGCACTTGGGACTCATCTCCCCGGGCGTGC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGCCGAGCTTGGGTTCTaGGCGGGAGCAGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKAELGF*AGAGWP
Trigger: CGGCCACCCTGCTCCCGCCCAGAACCCAAGCTCGGC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGGGACGGGTGTCGAGTaGAGCTGGGTTTCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKGTGVE*SWVSPA
Trigger: CGCGGGGGAAACCCAGCTTCACTCGACACCCGTCCC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGCACGCCCGGGGAGATaGGTCCCAAGTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKARPGR*VPSAAG
Trigger: CCCTGCAGCACTTGGGACTCATCTCCCCGGGCGTGC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGGGATACCGGGACTGTaGCAGCTCCAGGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGGIPGL*QLQAPG
Trigger: GCCCGGGGCCTGGAGCTGGCACAGTCCCGGTATCCC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGGTGGGGCAGACGGTTaGGCTCAGGCCAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGGGADG*AQARGW
Trigger: CCACCCCCTGGCCTGAGCCCAACCGTCTGCCCCACC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGTCACAGGAACAGGCTaGTGTGCCCCTGTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKVTGTG*CAPVPA
Trigger: CGCGGGGACAGGGGCACAGCAGCCTGTTCCTGTGAC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACCAGGGTGGCCGGAGTTaGGGGCTGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNQGGRS*GLGCSQ
Trigger: TTGGGAACAGCCCAGCCCTCAACTCCGGCCACCCTG...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAACAGGGTGGCCGGAGTTaGGGGCTGGGCTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKQGGRS*GLGCSQ
Trigger: TTGGGAACAGCCCAGCCCTCAACTCCGGCCACCCTG...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCCTTTCTGGTGCTGGCTaGAAGCTTCCGGTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPLSGAG*KLPVVA
Trigger: CGCCACAACCGGAAGCTTGCAGCCAGCACCAGAAAG...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGGAACAGGCTGCTGTaGCCCTGTCCCCGCGACTGG +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNRNRLL*PCPRDW
Trigger: CCAGTCGCGGGGACAGGGGCACAGCAGCCTGTTCCT...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAAGGAACAGGCTGCTGTaGCCCTGTCCCCGCGACTGG +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKRNRLL*PCPRDW
Trigger: CCAGTCGCGGGGACAGGGGCACAGCAGCCTGTTCCT...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGTCACAGGAACAGGCTaGTGTGCCCCTGTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKVTGTG*CAPVPA
Trigger: CGCGGGGACAGGGGCACAGCAGCCTGTTCCTGTGAC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAACAGCTTTGTTGCTCTTaGCAGGGCTGCTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKQLCCS*QGCWER
Trigger: CCGCTCCCAGCAGCCCTGTCAAGAGCAACAAAGCTG...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAGGCGGCTCACCATGTaGAGGCTCTCTAGGACATTC +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPRRLTM*RLSRTF
Trigger: GAATGTCCTAGAGAGCCTGCACATGGTGAGCCGCCT...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGTCCATGGCTCTCCTTaGGAGACTTCCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPVHGSP*ETSLGL
Trigger: CAAGCCCAAGGAAGTCTCCCAAGGAGAGCCATGGAC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTATTCACAGCAGGGTTaGGGTACTTGGGGTACCGCG +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPYSQQG*GTWGTA
Trigger: CGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGGAACCACTGTTGTTTaGGCTGATTTCTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPGTTVV*ADFWAR
Trigger: ACGGGCCCAGAAATCAGCCCAAACAACAGTGGTTCC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGACTGGCGAGTCATGGTTaGTGGCCCTCCTTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGLASHG*WPSFAE
Trigger: CTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAG...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAAGGACTGGCGAGTCATaGTTGGTGGCCCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKRTGES*LVALLC
Trigger: GCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCT...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAAGGCAGGAAGAGGCATaGTGGGGCTGGAACCACTGT +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGRQEEA*WGWNHC
Trigger: ACAGTGGTTCCAGCCCCATCATGCCTCTTCCTGCCT...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAAGGCAGGAAGAGGCATaGTGGGGCTGGAACCACTGT +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKRQEEA*WGWNHC
Trigger: ACAGTGGTTCCAGCCCCATCATGCCTCTTCCTGCCT...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGACTTTCTGGTGCTGGCTaGAAGCTTCCGGTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGLSGAG*KLPVVA
Trigger: CGCCACAACCGGAAGCTTGCAGCCAGCACCAGAAAG...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTTGAGACTTCCAGTTTaGGCTGTGGGACAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPLRLPV*AVGQRG
Trigger: CCCTCTTTGTCCCACAGCGCAAACTGGAAGTCTCAA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCCAGGTTGTAAGTAGATaGCATAGGATGGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPQVVSR*HRMGPK
Trigger: CTTCGGGCCCATCCTATGCCATCTACTTACAACCTG...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGCTCAGGCCAGGGGGTaGTGTCAACATTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNAQARG*CQHLGL
Trigger: CAAGCCCAAATGTTGACACCACCCCCTGGCCTGAGC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGGTTGTCCGTTTAGTTaGCTCTGGCCCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGGCPFS*LWPRTG
Trigger: GCCAGTCCTGGGCCAGAGCCAACTAAACGGACAACC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAACCAACTGGGAGCCTTTaGGTGTCACAGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKPTGSL*VSQEQA
Trigger: AGCCTGTTCCTGTGACACCCAAAGGCTCCCAGTTGG...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAAGCAGTGAGTTCCGATaGTGCCACTGGGATCACACC +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGSSEFR*CHWDHT
Trigger: GGTGTGATCCCAGTGGCATCATCGGAACTCACTGCT...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAAGCAGTGAGTTCCGATaGTGCCACTGGGATCACACC +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKSSEFR*CHWDHT
Trigger: GGTGTGATCCCAGTGGCATCATCGGAACTCACTGCT...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGCCTTCGAGGACGGATaGAGGGGGCTTTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGAFEDG*RGLFIS
Trigger: ACTGATGAAAAGCCCCCTGCATCCGTCCTCGAAGGC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGCCTTCGAGGACGGATaGAGGGGGCTTTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNAFEDG*RGLFIS
Trigger: ACTGATGAAAAGCCCCCTGCATCCGTCCTCGAAGGC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGGCGGCTCACCATGTaGAGGCTCTCTAGGACATTC +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNRRLTM*RLSRTF
Trigger: GAATGTCCTAGAGAGCCTGCACATGGTGAGCCGCCT...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGAGATGAGTCCCAAGTaGTGCAGGGTAAAGTTTACG +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPEMSPK*CRVKFT
Trigger: CGTAAACTTTACCCTGCAGCACTTGGGACTCATCTC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGTCCATGGCTCTCCTTaGGAGACTTCCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGVHGSP*ETSLGL
Trigger: CAAGCCCAAGGAAGTCTCCCAAGGAGAGCCATGGAC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGGCTGTGGGTGTCCATaGCTCTCCTTGGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYGCGCP*LSLGDF
Trigger: GAAGTCTCCCAAGGAGAGCCATGGACACCCACAGCC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACTATTCACAGCAGGGTTaGGGTACTTGGGGTACCGCG +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNYSQQG*GTWGTA
Trigger: CGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATA...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAGTGTACCTGTTTTTaGCAAGGCGGCTCACCATGT +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPKCTCF*QGGSPC
Trigger: ACATGGTGAGCCGCCTTGCCAAAAACAGGTACACTT...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGTCCAGGGGAGCCAGTaGTTTGTAGTGCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKVQGSQ*FVVPRS
Trigger: AGATCTGGGCACTACAAACCACTGGCTCCCCTGGAC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGCTCAGGCCAGGGGGTaGTGTCAACATTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYAQARG*CQHLGL
Trigger: CAAGCCCAAATGTTGACACCACCCCCTGGCCTGAGC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAATGCCTTTCTGGTGCTaGCTGCAAGCTTCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKMPFWC*LQASGC
Trigger: ACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCAT...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGGATCACACCTGCAATaGGGGAGCCATAGATCCGGT +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNGSHLQ*GSHRSG
Trigger: ACCGGATCTATGGCTCCCCCATTGCAGGTGTGATCC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATAGGACTGGCGAGTCATaGTTGGTGGCCCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYRTGES*LVALLC
Trigger: GCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCT...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGGTTGTCCGTTTAGTTaGCTCTGGCCCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYGCPFS*LWPRTG
Trigger: GCCAGTCCTGGGCCAGAGCCAACTAAACGGACAACC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTGGAGAGGGTGTACCTaGGTTTTCAGTGTTAGACAA +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPWRGCT*VFSVRQ
Trigger: TTGTCTAACACTGAAAACTCAGGTACACCCTCTCCA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGTGGATATCCTCAGTTaGGACTTCCAGTTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKVDILS*DFQFAL
Trigger: CAGCGCAAACTGGAAGTCTCAACTGAGGATATCCAC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGTTTTGGTGAGGTTGTaGCGGCCATGCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNVLVRL*RPCQVY
Trigger: GTACACTTGGCATGGCCGGCACAACCTCACCAAAAC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGACTGCTCTTCCAACTaGATCTTGCAAATAGCGGCG +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKDCSSN*ILQIAA
Trigger: CGCCGCTATTTGCAAGATGCAGTTGGAAGAGCAGTC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAGAGCTCAAGTTATCTaGTTCTACACGTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPRAQVI*FYTWGY
Trigger: GTATCCCCACGTGTAGAAGCAGATAACTTGAGCTCT...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGGAACCACTGTTGTTTaGGCTGATTTCTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGGTTVV*ADFWAR
Trigger: ACGGGCCCAGAAATCAGCCCAAACAACAGTGGTTCC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGTCCAGGGGAGCCAGTaGTTTGTAGTGCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYVQGSQ*FVVPRS
Trigger: AGATCTGGGCACTACAAACCACTGGCTCCCCTGGAC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAATGCCTTTCTGGTGCTaGCTGCAAGCTTCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKMPFWC*LQASGC
Trigger: ACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCAT...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGGATCACACCTGCAATaGGGGAGCCATAGATCCGGT +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYGSHLQ*GSHRSG
Trigger: ACCGGATCTATGGCTCCCCCATTGCAGGTGTGATCC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATTTTCAGCCACCAACTaGGAGCCTTTGGGTGTCACA +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKFSATN*EPLGVT
Trigger: TGTGACACCCAAAGGCTCCCAGTTGGTGGCTGAAAA...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGTGGATATCCTCAGTTaGGACTTCCAGTTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGVDILS*DFQFAL
Trigger: CAGCGCAAACTGGAAGTCTCAACTGAGGATATCCAC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAAAGCACATGTCTGAATaGCCATTCTGGCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKKHMSE*PFWPVC
Trigger: ACACACTGGCCAGAATGGGCATTCAGACATGTGCTT...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGACTGCTCTTCCAACTaGATCTTGCAAATAGCGGCG +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKDCSSN*ILQIAA
Trigger: CGCCGCTATTTGCAAGATGCAGTTGGAAGAGCAGTC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACCTTGGGAGACTTCCTTaGGCTTGGTTGGTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNLGRLP*AWLVWL
Trigger: TAACCACACCAACCAAGCCCAAGGAAGTCTCCCAAG...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATCCTTCCGACTCGGCTaGGATTTCTCAAATTCGTCT +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKSFRLG*DFSNSS
Trigger: AGACGAATTTGAGAAATCCCAGCCGAGTCGGAAGGA...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACCAGGTTGTAAGTAGATaGCATAGGATGGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNQVVSR*HRMGPK
Trigger: CTTCGGGCCCATCCTATGCCATCTACTTACAACCTG...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGTGGTGTCAACATTTaGGCTTGGGCAGGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKGGVNI*AWAGCK
Trigger: CTTACAACCTGCCCAAGCCCAAATGTTGACACCACC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAACCTAGGGATGAGCACTaGGTAAGAGGGATTAGGTAT +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKPRDEH*VRGIRY
Trigger: ATACCTAATCCCTCTTACCCAGTGCTCATCCCTAGG...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTTCAGAGGTGTCACATaGAATGGGGGAAAATTCACA +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPFRGVT*NGGKFT
Trigger: TGTGAATTTTCCCCCATTCCATGTGACACCTCTGAA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATTTTCAGCCACCAACTaGGAGCCTTTGGGTGTCACA +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKFSATN*EPLGVT
Trigger: TGTGACACCCAAAGGCTCCCAGTTGGTGGCTGAAAA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTTGATCATCATGATCTaGTCAGCGTACTTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VHSHAHVCISAVILSKNPLIIMI*SAYLFS
Trigger: AGAGAACAAGTACGCTGAGCAGATCATGATGATCAA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGAGATGAGTCCCAAGTaGTGCAGGGTAAAGTTTACG +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKEMSPK*CRVKFT
Trigger: CGTAAACTTTACCCTGCAGCACTTGGGACTCATCTC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATTTGAGACTTCCAGTTTaGGCTGTGGGACAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYLRLPV*AVGQRG
Trigger: CCCTCTTTGTCCCACAGCGCAAACTGGAAGTCTCAA...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATCTTGGGAGACTTCCTTaGGCTTGGTTGGTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYLGRLP*AWLVWL
Trigger: TAACCACACCAACCAAGCCCAAGGAAGTCTCCCAAG...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGATCCTTCCGACTCGGCTaGGATTTCTCAAATTCGTCT +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGSFRLG*DFSNSS
Trigger: AGACGAATTTGAGAAATCCCAGCCGAGTCGGAAGGA...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAAAGTGTACCTGTTTTTaGCAAGGCGGCTCACCATGT +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGKCTCF*QGGSPC
Trigger: ACATGGTGAGCCGCCTTGCCAAAAACAGGTACACTT...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGATCTGAATGCCCATTCTaGCCAGTGTGTGACTTGATC +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGSECPF*PVCDLI
Trigger: GATCAAGTCACACACTGGCCAGAATGGGCATTCAGA...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCATCACAAACTTCTaGCTCATCACGCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNSITNF*LITRKD
Trigger: GTCCTTACGCGTGATGAGCCAGAAGTTTGTGATGCT...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAAGCATCACAAACTTCTaGCTCATCACGCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKSITNF*LITRKD
Trigger: GTCCTTACGCGTGATGAGCCAGAAGTTTGTGATGCT...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGGTGGTGTCAACATTTaGGCTTGGGCAGGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYGGVNI*AWAGCK
Trigger: CTTACAACCTGCCCAAGCCCAAATGTTGACACCACC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGACCTAGGGATGAGCACTaGGTAAGAGGGATTAGGTAT +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGPRDEH*VRGIRY
Trigger: ATACCTAATCCCTCTTACCCAGTGCTCATCCCTAGG...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAAGGTGTCACATGGAATaGGGGAAAATTCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: HSHAHVCISAVILSKNPKRCHME*GKIHSS
Trigger: ACTGCTGTGAATTTTCCCCCATTCCATGTGACACCT...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAACGGGTGGAGAATTTTaGGAACTCTCAGCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGTGGEF*ELSALL
Trigger: CAACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGT...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATAAGCACATGTCTGAATaGCCATTCTGGCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYKHMSE*PFWPVC
Trigger: ACACACTGGCCAGAATGGGCATTCAGACATGTGCTT...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAAGAGCTCAAGTTATCTaGTTCTACACGTGGGGATAC +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGRAQVI*FYTWGY
Trigger: GTATCCCCACGTGTAGAAGCAGATAACTTGAGCTCT...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR TCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATTGGAGAGGGTGTACCTaGGTTTTCAGTGTTAGACAA +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYWRGCT*VFSVRQ
Trigger: TTGTCTAACACTGAAAACTCAGGTACACCCTCTCCA...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATCCAGATCTTCCACGTaGTCTTCCCCAATTAAAATC +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKSRSST*SSPIKI
Trigger: GATTTTAATTGGGGAAGACCACGTGGAAGATCTGGA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACTCCAGATCTTCCACGTaGTCTTCCCCAATTAAAATC +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNSRSST*SSPIKI
Trigger: GATTTTAATTGGGGAAGACCACGTGGAAGATCTGGA...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATTTGTTTGGGACGGGTaGAGAATTTTGAGAACTCTC +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKFVWDG*RILRTL
Trigger: GAGAGTTCTCAAAATTCTCCACCCGTCCCAAACAAA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATAGGTGTCACATGGAATaGGGGAAAATTCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYRCHME*GKIHSS
Trigger: ACTGCTGTGAATTTTCCCCCATTCCATGTGACACCT...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR GCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGATTGATCATCATGATCTaGTCAGCGTACTTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGLIIMI*SAYLFS
Trigger: AGAGAACAAGTACGCTGAGCAGATCATGATGATCAA...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAACGTCCATTTAAAAGCTaGTTTTCGACCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKRPFKS*FSTSFF
Trigger: GAAGAAAGAGGTCGAAAACCAGCTTTTAAATGGACG...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATTTTGTTTGGGACGGGTaGAGAATTTTGAGAACTCTC +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYFVWDG*RILRTL
Trigger: GAGAGTTCTCAAAATTCTCCACCCGTCCCAAACAAA...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATTTCAGAGGTGTCACATaGAATGGGGGAAAATTCACA +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYFRGVT*NGGKFT
Trigger: TGTGAATTTTCCCCCATTCCATGTGACACCTCTGAA...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATCGTCCATTTAAAAGCTaGTTTTCGACCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SHAHVCISAVILSKNPKYRPFKS*FSTSFF
Trigger: GAAGAAAGAGGTCGAAAACCAGCTTTTAAATGGACG...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGACTTTCTTCTGTAACATaGACTTTCTTGATAAGATCC +
Preference number: 4 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGLSSVT*TFLIRS
Trigger: GGATCTTATCAAGAAAGTCCATGTTACAGAAGAAAG...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CCA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACCTTTCTTCTGTAACATaGACTTTCTTGATAAGATCC +
Preference number: 4 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNLSSVT*TFLIRS
Trigger: GGATCTTATCAAGAAAGTCCATGTTACAGAAGAAAG...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp CGAGCTTGGGTTCTGGGCGGGAGCAGGGTGGCCGGAGTTGAGGGCTaGGCTGTTCCCAACAGGTACGGCCGCCATAGATGTTGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RAWVLGGSRVAGVEG*AVPNRYGRHRCWGD
Trigger: GTCTCCCCAACATCTATGGCGGCCGTACCTGTTGGGAACAGCCCAGCCCTCAACTCCGGCCACCCTGCTCCCGCCCAGAACCCAAGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp GAGAGCTCAAGTTATCTGCTTCTACACGTGGGGATACCGGGACTGTaGCAGCTCCAGGCCCCGGGCTGGCAGACATCTGCACGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: ESSSYLLLHVGIPGL*QLQAPGWQTSARPG
Trigger: CCCCGGGCGTGCAGATGTCTGCCAGCCCGGGGCCTGGAGCTGGCACAGTCCCGGTATCCCCACGTGTAGAAGCAGATAACTTGAGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp GTAAAGTTTACGATAGCCGAGCTTGGGTTCTGGGCGGGAGCAGGGTaGCCGGAGTTGAGGGCTGGGCTGTTCCCAACAGGTACGGCCGCC +
Preference number: 5 (lower is better)
Translates to: VKFTIAELGFWAGAG*PELRAGLFPTGTAA
Trigger: GGCGGCCGTACCTGTTGGGAACAGCCCAGCCCTCAACTCCGGCCACCCTGCTCCCGCCCAGAACCCAAGCTCGGCTATCGTAAACTTTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp TGCTGTGCCCCTGTCCCCGCGACTGGTTGTCCGTTTAGTTGGCTCTaGCCCAGGACTGGCGAGTCATGGTTGGTGGCCCTCCTTTGCCGA +
Preference number: 5 (lower is better)
Translates to: CCAPVPATGCPFSWL*PRTGESWLVALLCR
Trigger: TCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAACGGACAACCAGTCGCGGGGACAGGGGCACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp CCCGGGCTGGCAGACATCTGCACGCCCGGGGAGATGAGTCCCAAGTaGTGCAGGGTAAAGTTTACGATAGCCGAGCTTGGGTTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: PGLADICTPGEMSPK*CRVKFTIAELGFWA
Trigger: CGCCCAGAACCCAAGCTCGGCTATCGTAAACTTTACCCTGCAGCACTTGGGACTCATCTCCCCGGGCGTGCAGATGTCTGCCAGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp GGGCTGGCAGACATCTGCACGCCCGGGGAGATGAGTCCCAAGTGCTaGAGGGTAAAGTTTACGATAGCCGAGCTTGGGTTCTGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: GLADICTPGEMSPKC*RVKFTIAELGFWAG
Trigger: TCCCGCCCAGAACCCAAGCTCGGCTATCGTAAACTTTACCCTGCAGCACTTGGGACTCATCTCCCCGGGCGTGCAGATGTCTGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp GATGAGTCCCAAGTGCTGCAGGGTAAAGTTTACGATAGCCGAGCTTaGGTTCTGGGCGGGAGCAGGGTGGCCGGAGTTGAGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: DESQVLQGKVYDSRA*VLGGSRVAGVEGWA
Trigger: AGCCCAGCCCTCAACTCCGGCCACCCTGCTCCCGCCCAGAACCCAAGCTCGGCTATCGTAAACTTTACCCTGCAGCACTTGGGACTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp GTACCCCGATCTCCGGTCGTCTCCTTGCTTCGATGCTTAGCACCATaGCTTTCTGGTGCTGGCTGCAAGCTTCCGGTTGTGGCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: VPRSPVVSLLRCLAP*LSGAGCKLPVVAAS
Trigger: AGACGCCGCCACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAGGAGACGACCGGAGATCGGGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp CGAGTCATGGTTGGTGGCCCTCCTTTGCCGAGAGCTCAAGTTATCTaGTTCTACACGTGGGGATACCGGGACTGTGCCAGCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RVMVGGPPLPRAQVI*FYTWGYRDCASSRP
Trigger: GGGCCTGGAGCTGGCACAGTCCCGGTATCCCCACGTGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp GTCTCCTTGCTTCGATGCTTAGCACCATGCCTTTCTGGTGCTGGCTaGAAGCTTCCGGTTGTGGCGGCGTCTGTGGCCGTCTTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VSLLRCLAPCLSGAG*KLPVVAASVAVFSA
Trigger: TGCTGAGAAGACGGCCACAGACGCCGCCACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp ACTTCCTTGGGCTTGGTTGGTGTGGTTAGAGGGCCCAAGTCAGGCTaGATCTCAGCCAACACCATGTTGGCCTTCGAGGACGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: TSLGLVGVVRGPKSG*ISANTMLAFEDGCR
Trigger: CCTGCATCCGTCCTCGAAGGCCAACATGGTGTTGGCTGAGATCCAGCCTGACTTGGGCCCTCTAACCACACCAACCAAGCCCAAGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp CCTCGGCCACCTCGTCCAGGCAGATGTCGTTATTCACAGCAGGGTTaGGGTACTTGGGGTACCGCGCTAGGAATTTGTGGCATAGCAACC +
Preference number: 5 (lower is better)
Translates to: PRPPRPGRCRYSQQG*GTWGTALGICGIAT
Trigger: GGTTGCTATGCCACAAATTCCTAGCGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAACGACATCTGCCTGGACGAGGTGGCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp CAGGGGGTGGTGTCAACATTTGGGCTTGGGCAGGTTGTAAGTAGATaGCATAGGATGGGCCCGAAGGGGCCTGAGGTAGGATCACAGGCA +
Preference number: 5 (lower is better)
Translates to: QGVVSTFGLGQVVSR*HRMGPKGPEVGSQA
Trigger: TGCCTGTGATCCTACCTCAGGCCCCTTCGGGCCCATCCTATGCCATCTACTTACAACCTGCCCAAGCCCAAATGTTGACACCACCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp GTGTCCATGGCTCTCCTTGGGAGACTTCCTTGGGCTTGGTTGGTGTaGTTAGAGGGCCCAAGTCAGGCTGGATCTCAGCCAACACCATGT +
Preference number: 5 (lower is better)
Translates to: VSMALLGRLPWAWLV*LEGPSQAGSQPTPC
Trigger: ACATGGTGTTGGCTGAGATCCAGCCTGACTTGGGCCCTCTAACCACACCAACCAAGCCCAAGGAAGTCTCCCAAGGAGAGCCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp GCAGATGACAATGGGCTAGGGATCAGGGGGACCACGCCCAGGGGCTaGATAAGGGACGGTGTAAGCAGTTCTAGCTCAGTGTTCACTGTA +
Preference number: 5 (lower is better)
Translates to: ADDNGLGIRGTTPRG*IRDGVSSSSSVFTV
Trigger: TACAGTGAACACTGAGCTAGAACTGCTTACACCGTCCCTTATCCAGCCCCTGGGCGTGGTCCCCCTGATCCCTAGCCCATTGTCATCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp GTCCGTTTAGTTGGCTCTGGCCCAGGACTGGCGAGTCATGGTTGGTaGCCCTCCTTTGCCGAGAGCTCAAGTTATCTGCTTCTACACGTG +
Preference number: 5 (lower is better)
Translates to: VRLVGSGPGLASHGW*PSFAESSSYLLLHV
Trigger: CACGTGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAACGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp CCTCGTCCAGGCAGATGTCGTTATTCACAGCAGGGTTGGGGTACTTaGGGTACCGCGCTAGGAATTTGTGGCATAGCAACCCCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: PRPGRCRYSQQGWGT*GTALGICGIATPSS
Trigger: AGAGCTTGGGGTTGCTATGCCACAAATTCCTAGCGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAACGACATCTGCCTGGACGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp GTTGTCCGTTTAGTTGGCTCTGGCCCAGGACTGGCGAGTCATGGTTaGTGGCCCTCCTTTGCCGAGAGCTCAAGTTATCTGCTTCTACAC +
Preference number: 5 (lower is better)
Translates to: VVRLVGSGPGLASHG*WPSFAESSSYLLLH
Trigger: GTGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAACGGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp ACTGGTTGTCCGTTTAGTTGGCTCTGGCCCAGGACTGGCGAGTCATaGTTGGTGGCCCTCCTTTGCCGAGAGCTCAAGTTATCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TGCPFSWLWPRTGES*LVALLCRELKLSAS
Trigger: AGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAACGGACAACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp TTAGTTGGTCCACCCGGAGTACGGAAGAAATTTTCAGCCACCAACTaGGAGCCTTTGGGTGTCACAGGAACAGGCTGCTGTGCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LVGPPGVRKKFSATN*EPLGVTGTGCCAPV
Trigger: GACAGGGGCACAGCAGCCTGTTCCTGTGACACCCAAAGGCTCCCAGTTGGTGGCTGAAAATTTCTTCCGTACTCCGGGTGGACCAACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp ATCATCCTCTTTGTACCCCGATCTCCGGTCGTCTCCTTGCTTCGATaGTTAGCACCATGCCTTTCTGGTGCTGGCTGCAAGCTTCCGGTT +
Preference number: 5 (lower is better)
Translates to: IILFVPRSPVVSLLR*LAPCLSGAGCKLPV
Trigger: AACCGGAAGCTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAGGAGACGACCGGAGATCGGGGTACAAAGAGGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp GTTGAGGGCTGGGCTGTTCCCAACAGGTACGGCCGCCATAGATGTTaGGGAGACCATAAGTTTCAGAGGTGTCACATGGAATGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VEGWAVPNRYGRHRC*GDHKFQRCHMEWGK
Trigger: TTTCCCCCATTCCATGTGACACCTCTGAAACTTATGGTCTCCCCAACATCTATGGCGGCCGTACCTGTTGGGAACAGCCCAGCCCTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp TTTTCAGTGTTAGACAACACAGAGTCTGGCCCTAGGGATGAGCACTaGGTAAGAGGGATTAGGTATCCTGATGGGAACAGGGGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: FSVLDNTESGPRDEH*VRGIRYPDGNRGVG
Trigger: CCCCACGCCCCTGTTCCCATCAGGATACCTAATCCCTCTTACCCAGTGCTCATCCCTAGGGCCAGACTCTGTGTTGTCTAACACTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp GCCCGGAATTCTACTCCAGGGAGTTCTACGAAGCACATGTCTGAATaGCCATTCTGGCCAGTGTGTGACTTGATCACGTGGTCCTCTATG +
Preference number: 5 (lower is better)
Translates to: ARNSTPGSSTKHMSE*PFWPVCDLITWSSM
Trigger: CATAGAGGACCACGTGATCAAGTCACACACTGGCCAGAATGGGCATTCAGACATGTGCTTCGTAGAACTCCCTGGAGTAGAATTCCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp TCTACTCCAGGGAGTTCTACGAAGCACATGTCTGAATGCCCATTCTaGCCAGTGTGTGACTTGATCACGTGGTCCTCTATGCCACAGCTC +
Preference number: 5 (lower is better)
Translates to: STPGSSTKHMSECPF*PVCDLITWSSMPQL
Trigger: GAGCTGTGGCATAGAGGACCACGTGATCAAGTCACACACTGGCCAGAATGGGCATTCAGACATGTGCTTCGTAGAACTCCCTGGAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGCAGGGTGGCCGGAGTaGAGGGCTGGGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNAGWPE*RAGLFP
Trigger: TGGGAACAGCCCAGCCCTCAACTCCGGCCACCCTGC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGCAGGGTGGCCGGAGTaGAGGGCTGGGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKAGWPE*RAGLFP
Trigger: TGGGAACAGCCCAGCCCTCAACTCCGGCCACCCTGC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGAGACTTCCTTGGGCTaGGTTGGTGTGGTTAGAGGG +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPETSLG*VGVVRG
Trigger: CCCTCTAACCACACCAACCAAGCCCAAGGAAGTCTC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTGTCCATGGCTCTCCTaGGGAGACTTCCTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPCPWLS*GDFLGL
Trigger: AAGCCCAAGGAAGTCTCCCAAGGAGAGCCATGGACA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGGGCTGGAACCACTGTaGTTTGGGCTGATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPGLEPL*FGLISG
Trigger: CCCAGAAATCAGCCCAAACAACAGTGGTTCCAGCCC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp CATCTTGCAAATAGCGGCGAGCTGAGCCATTTTGTTTGGGACGGGTaGAGAATTTTGAGAACTCTCAGCTTTGTTGCTCTTGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: HLANSGELSHFVWDG*RILRTLSFVALDRA
Trigger: AGCCCTGTCAAGAGCAACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGTCCCAAACAAAATGGCTCAGCTCGCCGCTATTTGCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAACTTCCTTGGGCTTGGTaGGTGTGGTTAGAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: HSHAHVCISAVILSKNPKLPWAW*VWLEGP
Trigger: TGGGCCCTCTAACCACACCAACCAAGCCCAAGGAAG...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCCAAGTGTACCTGTTTTaGGCAAGGCGGCTCACCATG +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPQVYLF*ARRLTM
Trigger: CATGGTGAGCCGCCTTGCCAAAAACAGGTACACTTG...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTGGCCAGTGTGTGACTaGATCACGTGGTCCTCTATG +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPWPVCD*ITWSSM
Trigger: CATAGAGGACCACGTGATCAAGTCACACACTGGCCA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGAACTCTCAGCTTTGTaGCTCTTGACAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPELSAL*LLTGLL
Trigger: CAGCAGCCCTGTCAAGAGCAACAAAGCTGAGAGTTC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp CGACTCGGCTGGGATTTCTCAAATTCGTCTCCTGATAAGTGTTCGTaGAAACAGTCTCTAGCTTCAGGTAATGCACTTCGGTTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: RLGWDFSNSSPDKCS*KQSLASGNALRLSD
Trigger: GTCTGACAACCGAAGTGCATTACCTGAAGCTAGAGACTGTTTGCACGAACACTTATCAGGAGACGAATTTGAGAAATCCCAGCCGAGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp AATTTGTGGCATAGCAACCCCAAGCTCTTCTCCTTCCGACTCGGCTaGGATTTCTCAAATTCGTCTCCTGATAAGTGTTCGTGCAAACAG +
Preference number: 5 (lower is better)
Translates to: NLWHSNPKLFSFRLG*DFSNSSPDKCSCKQ
Trigger: CTGTTTGCACGAACACTTATCAGGAGACGAATTTGAGAAATCCCAGCCGAGTCGGAAGGAGAAGAGCTTGGGGTTGCTATGCCACAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATGTCCATGGCTCTCCTaGGGAGACTTCCTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: HSHAHVCISAVILSKNPKCPWLS*GDFLGL
Trigger: AAGCCCAAGGAAGTCTCCCAAGGAGAGCCATGGACA...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATCAGCTTTGTTGCTCTaGACAGGGCTGCTGGGAGCG +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKSALLL*TGLLGA
Trigger: CGCTCCCAGCAGCCCTGTCAAGAGCAACAAAGCTGA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGATCAGCTTTGTTGCTCTaGACAGGGCTGCTGGGAGCG +
Preference number: 5 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGSALLL*TGLLGA
Trigger: CGCTCCCAGCAGCCCTGTCAAGAGCAACAAAGCTGA...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAACCAACTGGGAGCCTTaGGGTGTCACAGGAACAGGC +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKTNWEP*GVTGTG
Trigger: GCCTGTTCCTGTGACACCCAAAGGCTCCCAGTTGGT...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAACCAACTGGGAGCCTTaGGGTGTCACAGGAACAGGC +
Preference number: 5 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGTNWEP*GVTGTG
Trigger: GCCTGTTCCTGTGACACCCAAAGGCTCCCAGTTGGT...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp TTCCAACTGCATCTTGCAAATAGCGGCGAGCTGAGCCATTTTGTTTaGGACGGGTGGAGAATTTTGAGAACTCTCAGCTTTGTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: FQLHLANSGELSHFV*DGWRILRTLSFVAL
Trigger: AAGAGCAACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGTCCCAAACAAAATGGCTCAGCTCGCCGCTATTTGCAAGATGCAGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATCTTCCTTGGGCTTGGTaGGTGTGGTTAGAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: SHAHVCISAVILSKNPKYLPWAW*VWLEGP
Trigger: TGGGCCCTCTAACCACACCAACCAAGCCCAAGGAAG...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGAGACTTCCTTGGGCTaGGTTGGTGTGGTTAGAGGG +
Preference number: 5 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNETSLG*VGVVRG
Trigger: CCCTCTAACCACACCAACCAAGCCCAAGGAAGTCTC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGATTATTCACAGCAGGGTaGGGGTACTTGGGGTACCGC +
Preference number: 5 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGLFTAG*GYLGYR
Trigger: GCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAA...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATTATTCACAGCAGGGTaGGGGTACTTGGGGTACCGC +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKLFTAG*GYLGYR
Trigger: GCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCCGTAAGGACTTGTCTTaGCGGCTGTTTACAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPRKDLS*RLFTEA
Trigger: AGCTTCTGTAAACAGCCGCAAAGACAAGTCCTTACG...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGGCTGGAACCACTGTaGTTTGGGCTGATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKGLEPL*FGLISG
Trigger: CCCAGAAATCAGCCCAAACAACAGTGGTTCCAGCCC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGAACTCTCAGCTTTGTaGCTCTTGACAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSHAHVCISAVILSKNPKELSAL*LLTGLL
Trigger: CAGCAGCCCTGTCAAGAGCAACAAAGCTGAGAGTTC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGCTGAGCCATTTTGTTaGGGACGGGTGGAGAATTTT +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPAEPFC*GRVENF
Trigger: AAAATTCTCCACCCGTCCCAAACAAAATGGCTCAGC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATCCTTGGGAGACTTCCTaGGGCTTGGTTGGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SHAHVCISAVILSKNPKYPWETS*GLVGVV
Trigger: AACCACACCAACCAAGCCCAAGGAAGTCTCCCAAGG...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGATACCGCGCTAGGAATTaGTGGCATAGCAACCCCAAG +
Preference number: 5 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGYRARN*WHSNPK
Trigger: CTTGGGGTTGCTATGCCACAAATTCCTAGCGCGGTA...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATACCGCGCTAGGAATTaGTGGCATAGCAACCCCAAG +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKYRARN*WHSNPK
Trigger: CTTGGGGTTGCTATGCCACAAATTCCTAGCGCGGTA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAACAAGTGTACCTGTTTTaGGCAAGGCGGCTCACCATG +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKQVYLF*ARRLTM
Trigger: CATGGTGAGCCGCCTTGCCAAAAACAGGTACACTTG...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAATGGCCAGTGTGTGACTaGATCACGTGGTCCTCTATG +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKWPVCD*ITWSSM
Trigger: CATAGAGGACCACGTGATCAAGTCACACACTGGCCA...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGACGGGTGGAGAATTTaGAGAACTCTCAGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPDGWRI*RTLSFV
Trigger: AACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGTC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 90 bp AAATCAAACTCTTGCTCATATTCTTTCCTTTTGATCATCATGATCTaGTCAGCGTACTTGTTCTCTTCCCCGACACTCTTCAGCGTCCCG +
Preference number: 5 (lower is better)
Translates to: KSNSCSYSFLLIIMI*SAYLFSSPTLFSVP
Trigger: CGGGACGCTGAAGAGTGTCGGGGAAGAGAACAAGTACGCTGAGCAGATCATGATGATCAAAAGGAAAGAATATGAGCAAGAGTTTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAATCACGCGTAAGGACTaGTCTTTGCGGCTGTTTACA +
Preference number: 5 (lower is better)
Translates to: HSHAHVCISAVILSKNPKITRKD*SLRLFT
Trigger: TGTAAACAGCCGCAAAGACAAGTCCTTACGCGTGAT...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGTAGAGAAGAGGTTTTaGGCACAGTTCTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPVEKRF*AQFSFA
Trigger: TGCAAAAGAGAACTGTGCCAAAAACCTCTTCTCTAC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAATGCTCTTTACCAACTaGATGAGGGACGGGTGTCGA +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKMLFTN*MRDGCR
Trigger: TCGACACCCGTCCCTCATCAAGTTGGTAAAGAGCAT...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTGTAGTGCCCAGATCTaGCTAGGTTTACTTTCACTT +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPCSAQI*LGLLSL
Trigger: AAGTGAAAGTAAACCTAGCAAGATCTGGGCACTACA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCTCTATGCCACAGCTCTaGATAAAATCAAACTCTTGC +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPSMPQL*IKSNSC
Trigger: GCAAGAGTTTGATTTTATCAAGAGCTGTGGCATAGA...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGACGTAAGGACTTGTCTTaGCGGCTGTTTACAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGRKDLS*RLFTEA
Trigger: AGCTTCTGTAAACAGCCGCAAAGACAAGTCCTTACG...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACATCACGCGTAAGGACTaGTCTTTGCGGCTGTTTACA +
Preference number: 5 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNITRKD*SLRLFT
Trigger: TGTAAACAGCCGCAAAGACAAGTCCTTACGCGTGAT...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GTGCACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCGTAACATGGACTTTCTaGATAAGATCCAAGCTACTC +
Preference number: 5 (lower is better)
Translates to: VHSHAHVCISAVILSKNPVTWTF*IRSKLL
Trigger: GAGTAGCTTGGATCTTATCAAGAAAGTCCATGTTAC...GGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATATGCTCTTTACCAACTaGATGAGGGACGGGTGTCGA +
Preference number: 5 (lower is better)
Translates to: SHAHVCISAVILSKNPKYMLFTN*MRDGCR
Trigger: TCGACACCCGTCCCTCATCAAGTTGGTAAAGAGCAT...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACTCCCCAATTAAAATCTaGGCAGCAATTTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNSPIKI*AAISRL
Trigger: GAGCCTGGAAATTGCTGCCAAGATTTTAATTGGGGA...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGCTGAGCCATTTTGTTaGGGACGGGTGGAGAATTTT +
Preference number: 5 (lower is better)
Translates to: SHAHVCISAVILSKNPKYAEPFC*GRVENF
Trigger: AAAATTCTCCACCCGTCCCAAACAAAATGGCTCAGC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGAGTTCCGAAGGAGGTTTaGTTAGCACCATCGAAATCT +
Preference number: 5 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGVPKEV*LAPSKS
Trigger: AGATTTCGATGGTGCTAACAAAACCTCCTTCGGAAC...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCCATAGACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACGTTCCGAAGGAGGTTTaGTTAGCACCATCGAAATCT +
Preference number: 5 (lower is better)
Translates to: SIDLIEEGCKLYKKTDCNVPKEV*LAPSKS
Trigger: AGATTTCGATGGTGCTAACAAAACCTCCTTCGGAAC...GTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTCTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 90 bp CCCGTCCATTTAAAAGCTGGTTTTCGACCTCTTTCTTCTGTAACATaGACTTTCTTGATAAGATCCAAGCTACTCAGGACATTAGCAATG +
Preference number: 5 (lower is better)
Translates to: PVHLKAGFRPLSSVT*TFLIRSKLLRTLAM
Trigger: CATTGCTAATGTCCTGAGTAGCTTGGATCTTATCAAGAAAGTCCATGTTACAGAAGAAAGAGGTCGAAAACCAGCTTTTAAATGGACGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp CACTCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAAGTAACATGGACTTTCTaGATAAGATCCAAGCTACTC +
Preference number: 5 (lower is better)
Translates to: HSHAHVCISAVILSKNPKVTWTF*IRSKLL
Trigger: GAGTAGCTTGGATCTTATCAAGAAAGTCCATGTTAC...TTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp GACTTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGTAGAGAAGAGGTTTTaGGCACAGTTCTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: DLIEEGCKLYKKTDCNSKVEKRF*AQFSFA
Trigger: TGCAAAAGAGAACTGTGCCAAAAACCTCTTCTCTAC...TTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATGACGGGTGGAGAATTTaGAGAACTCTCAGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SHAHVCISAVILSKNPKYDGWRI*RTLSFV
Trigger: AACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGTC...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TTGATTGAGGAGGGTTGTAAACTCTACAAAAAGACAGACTGCAACAGCAAAGGATCTATGCCACAGCTCTaGATAAAATCAAACTCTTGC +
Preference number: 5 (lower is better)
Translates to: LIEEGCKLYKKTDCNSKGSMPQL*IKSNSC
Trigger: GCAAGAGTTTGATTTTATCAAGAGCTGTGGCATAGA...TCCTTTGCTGTTGCAGTCTGTCTTTTTGTAGAGTTTACAACCCTCCTCAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS-3UTR CAA 90 bp TCGCATGCGCATGTGTGTATATCTGCTGTGATATTGAGTAAAAACCCCAAATATTGTAGTGCCCAGATCTaGCTAGGTTTACTTTCACTT +
Preference number: 5 (lower is better)
Translates to: SHAHVCISAVILSKNPKYCSAQI*LGLLSL
Trigger: AAGTGAAAGTAAACCTAGCAAGATCTGGGCACTACA...ATATTTGGGGTTTTTACTCAATATCACAGCAGATATACACACATGCGCATGCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp GTTCTGGGCGGGAGCAGGGTGGCCGGAGTTGAGGGCTaGGCTGTTCCCAACAGGTACGGCCGCCATAGATGT +
Preference number: 6 (lower is better)
Translates to: VLGGSRVAGVEG*AVPNRYGRHRC
Trigger: ACATCTATGGCGGCCGTACCTGTTGGGAACAGCCCAGCCCTCAACTCCGGCCACCCTGCTCCCGCCCAGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CCTGTCCCCGCGACTGGTTGTCCGTTTAGTTGGCTCTaGCCCAGGACTGGCGAGTCATGGTTGGTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: PVPATGCPFSWL*PRTGESWLVAL
Trigger: GAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAACGGACAACCAGTCGCGGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp CACCATGCCTTTCTGGTGCTGGCTGCAAGCTTCCGGTaGTGGCGGCGTCTGTGGCCGTCTTCTCAGCAGGGG +
Preference number: 6 (lower is better)
Translates to: HHAFLVLAASFR*WRRLWPSSQQG
Trigger: CCCCTGCTGAGAAGACGGCCACAGACGCCGCCACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp TCCAGTAGCATTAGAGGGCTGGGTGGGGCAGACGGTTaGGCTCAGGCCAGGGGGTGGTGTCAACATTTGGGC +
Preference number: 6 (lower is better)
Translates to: SSSIRGLGGADG*AQARGWCQHLG
Trigger: GCCCAAATGTTGACACCACCCCCTGGCCTGAGCCCAACCGTCTGCCCCACCCAGCCCTCTAATGCTACTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp CTTCGATGCTTAGCACCATGCCTTTCTGGTGCTGGCTaGAAGCTTCCGGTTGTGGCGGCGTCTGTGGCCGTC +
Preference number: 6 (lower is better)
Translates to: LRCLAPCLSGAG*KLPVVAASVAV
Trigger: GACGGCCACAGACGCCGCCACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp AGTTATCTGCTTCTACACGTGGGGATACCGGGACTGTaGCAGCTCCAGGCCCCGGGCTGGCAGACATCTGCA +
Preference number: 6 (lower is better)
Translates to: SYLLLHVGIPGL*QLQAPGWQTSA
Trigger: TGCAGATGTCTGCCAGCCCGGGGCCTGGAGCTGGCACAGTCCCGGTATCCCCACGTGTAGAAGCAGATAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CCTTTGCCGAGAGCTCAAGTTATCTGCTTCTACACGTaGGGATACCGGGACTGTGCCAGCTCCAGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: PLPRAQVICFYT*GYRDCASSRPR
Trigger: CCGGGGCCTGGAGCTGGCACAGTCCCGGTATCCCCACGTGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp AATGGGCTAGGGATCAGGGGGACCACGCCCAGGGGCTaGATAAGGGACGGTGTAAGCAGTTCTAGCTCAGTG +
Preference number: 6 (lower is better)
Translates to: NGLGIRGTTPRG*IRDGVSSSSSV
Trigger: CACTGAGCTAGAACTGCTTACACCGTCCCTTATCCAGCCCCTGGGCGTGGTCCCCCTGATCCCTAGCCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CTTGCTTCGATGCTTAGCACCATGCCTTTCTGGTGCTaGCTGCAAGCTTCCGGTTGTGGCGGCGTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: LASMLSTMPFWC*LQASGCGGVCG
Trigger: GCCACAGACGCCGCCACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CAAGTGCTGCAGGGTAAAGTTTACGATAGCCGAGCTTaGGTTCTGGGCGGGAGCAGGGTGGCCGGAGTTGAG +
Preference number: 6 (lower is better)
Translates to: QVLQGKVYDSRA*VLGGSRVAGVE
Trigger: CTCAACTCCGGCCACCCTGCTCCCGCCCAGAACCCAAGCTCGGCTATCGTAAACTTTACCCTGCAGCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp GGGCCCAAGTCAGGCTGGATCTCAGCCAACACCATGTaGGCCTTCGAGGACGGATGCAGGGGGCTTTTCATC +
Preference number: 6 (lower is better)
Translates to: GPKSGWISANTM*AFEDGCRGLFI
Trigger: GATGAAAAGCCCCCTGCATCCGTCCTCGAAGGCCAACATGGTGTTGGCTGAGATCCAGCCTGACTTGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp TTGGCTGTGGGTGTCCATGGCTCTCCTTGGGAGACTTCCTTGGGCTaGGTTGGTGTGGTTAGAGGGCCCAAGTCAGGCTGGATCTCAGCC +
Preference number: 6 (lower is better)
Translates to: LAVGVHGSPWETSLG*VGVVRGPKSGWISA
Trigger: GGCTGAGATCCAGCCTGACTTGGGCCCTCTAACCACACCAACCAAGCCCAAGGAAGTCTCCCAAGGAGAGCCATGGACACCCACAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp GTTGGTGGCCCTCCTTTGCCGAGAGCTCAAGTTATCTaGTTCTACACGTGGGGATACCGGGACTGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: VGGPPLPRAQVI*FYTWGYRDCAS
Trigger: GCTGGCACAGTCCCGGTATCCCCACGTGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp CCCAGGACTGGCGAGTCATGGTTGGTGGCCCTCCTTTaGCGAGAGCTCAAGTTATCTGCTTCTACACGTGGG +
Preference number: 6 (lower is better)
Translates to: PRTGESWLVALL*RELKLSASTRG
Trigger: CCCACGTGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp GCTCTCCTTGGGAGACTTCCTTGGGCTTGGTTGGTGTaGTTAGAGGGCCCAAGTCAGGCTGGATCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: ALLGRLPWAWLV*LEGPSQAGSQP
Trigger: TGGCTGAGATCCAGCCTGACTTGGGCCCTCTAACCACACCAACCAAGCCCAAGGAAGTCTCCCAAGGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CTGTGGGTGTCCATGGCTCTCCTTGGGAGACTTCCTTaGGCTTGGTTGGTGTGGTTAGAGGGCCCAAGTCAG +
Preference number: 6 (lower is better)
Translates to: LWVSMALLGRLP*AWLVWLEGPSQ
Trigger: CTGACTTGGGCCCTCTAACCACACCAACCAAGCCCAAGGAAGTCTCCCAAGGAGAGCCATGGACACCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CCGTTTAGTTGGCTCTGGCCCAGGACTGGCGAGTCATaGTTGGTGGCCCTCCTTTGCCGAGAGCTCAAGTTA +
Preference number: 6 (lower is better)
Translates to: PFSWLWPRTGES*LVALLCRELKL
Trigger: TAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp GTGAGGTTGTGCCGGCCATGCCAAGTGTACCTGTTTTaGGCAAGGCGGCTCACCATGTGCAGGCTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: VRLCRPCQVYLF*ARRLTMCRLSR
Trigger: CCTAGAGAGCCTGCACATGGTGAGCCGCCTTGCCAAAAACAGGTACACTTGGCATGGCCGGCACAACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp TTCTCTTCCCCGACACTCTTCAGCGTCCCGAGGGTTTaGGTGAGGTTGTGCCGGCCATGCCAAGTGTACCTG +
Preference number: 6 (lower is better)
Translates to: FSSPTLFSVPRV*VRLCRPCQVYL
Trigger: CAGGTACACTTGGCATGGCCGGCACAACCTCACCAAAACCCTCGGGACGCTGAAGAGTGTCGGGGAAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp GCCCAGGACTGGCGAGTCATGGTTGGTGGCCCTCCTTaGCCGAGAGCTCAAGTTATCTGCTTCTACACGTGG +
Preference number: 6 (lower is better)
Translates to: AQDWRVMVGGPP*PRAQVICFYTW
Trigger: CCACGTGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp TCCTCGGCCACCTCGTCCAGGCAGATGTCGTTATTCACAGCAGGGTaGGGGTACTTGGGGTACCGCGCTAGGAATTTGTGGCATAGCAAC +
Preference number: 6 (lower is better)
Translates to: SSATSSRQMSLFTAG*GYLGYRARNLWHSN
Trigger: GTTGCTATGCCACAAATTCCTAGCGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAACGACATCTGCCTGGACGAGGTGGCCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp TCCGCGGTGATCATCCTCTTTGTACCCCGATCTCCGGTCGTCTCCTaGCTTCGATGCTTAGCACCATGCCTTTCTGGTGCTGGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SAVIILFVPRSPVVS*LRCLAPCLSGAGCK
Trigger: CTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAGGAGACGACCGGAGATCGGGGTACAAAGAGGATGATCACCGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS TCA 72 bp CTTCCCCGACACTCTTCAGCGTCCCGAGGGTTTTGGTaGGGTTGTGCCGGCCATGCCAAGTGTACCTGTTTT +
Preference number: 6 (lower is better)
Translates to: LPRHSSASRGFW*GCAGHAKCTCF
Trigger: AAAACAGGTACACTTGGCATGGCCGGCACAACCTCACCAAAACCCTCGGGACGCTGAAGAGTGTCGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp TCTCCGGTCGTCTCCTTGCTTCGATGCTTAGCACCATaGCTTTCTGGTGCTGGCTGCAAGCTTCCGGTTGTG +
Preference number: 6 (lower is better)
Translates to: SPVVSLLRCLAP*LSGAGCKLPVV
Trigger: CACAACCGGAAGCTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAGGAGACGACCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp GACATCTGCACGCCCGGGGAGATGAGTCCCAAGTGCTaGAGGGTAAAGTTTACGATAGCCGAGCTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: DICTPGEMSPKC*RVKFTIAELGF
Trigger: GAACCCAAGCTCGGCTATCGTAAACTTTACCCTGCAGCACTTGGGACTCATCTCCCCGGGCGTGCAGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CCTCGTCCAGGCAGATGTCGTTATTCACAGCAGGGTTaGGGTACTTGGGGTACCGCGCTAGGAATTTGTGGC +
Preference number: 6 (lower is better)
Translates to: PRPGRCRYSQQG*GTWGTALGICG
Trigger: GCCACAAATTCCTAGCGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAACGACATCTGCCTGGACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp TTAGTTGGCTCTGGCCCAGGACTGGCGAGTCATGGTTaGTGGCCCTCCTTTGCCGAGAGCTCAAGTTATCTG +
Preference number: 6 (lower is better)
Translates to: LVGSGPGLASHG*WPSFAESSSYL
Trigger: CAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp CCGACACTCTTCAGCGTCCCGAGGGTTTTGGTGAGGTaGTGCCGGCCATGCCAAGTGTACCTGTTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: PTLFSVPRVLVR*CRPCQVYLFLA
Trigger: TGCCAAAAACAGGTACACTTGGCATGGCCGGCACAACCTCACCAAAACCCTCGGGACGCTGAAGAGTGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp GCGTACTTGTTCTCTTCCCCGACACTCTTCAGCGTCCCGAGGGTTTaGGTGAGGTTGTGCCGGCCATGCCAAGTGTACCTGTTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: AYLFSSPTLFSVPRV*VRLCRPCQVYLFLA
Trigger: TGCCAAAAACAGGTACACTTGGCATGGCCGGCACAACCTCACCAAAACCCTCGGGACGCTGAAGAGTGTCGGGGAAGAGAACAAGTACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp GGTTGTCCGTTTAGTTGGCTCTGGCCCAGGACTGGCGAGTCATGGTaGGTGGCCCTCCTTTGCCGAGAGCTCAAGTTATCTGCTTCTACA +
Preference number: 6 (lower is better)
Translates to: GCPFSWLWPRTGESW*VALLCRELKLSAST
Trigger: TGTAGAAGCAGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAACGGACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp ACACTCTTCAGCGTCCCGAGGGTTTTGGTGAGGTTGTaGCGGCCATGCCAAGTGTACCTGTTTTTGGCAAGG +
Preference number: 6 (lower is better)
Translates to: TLFSVPRVLVRL*RPCQVYLFLAR
Trigger: CCTTGCCAAAAACAGGTACACTTGGCATGGCCGGCACAACCTCACCAAAACCCTCGGGACGCTGAAGAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp TTTGTACCCCGATCTCCGGTCGTCTCCTTGCTTCGATaGTTAGCACCATGCCTTTCTGGTGCTGGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: FVPRSPVVSLLR*LAPCLSGAGCK
Trigger: CTTGCAGCCAGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAGGAGACGACCGGAGATCGGGGTACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp GTGTCAACATTTGGGCTTGGGCAGGTTGTAAGTAGATaGCATAGGATGGGCCCGAAGGGGCCTGAGGTAGGA +
Preference number: 6 (lower is better)
Translates to: VSTFGLGQVVSR*HRMGPKGPEVG
Trigger: TCCTACCTCAGGCCCCTTCGGGCCCATCCTATGCCATCTACTTACAACCTGCCCAAGCCCAAATGTTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp TACGGAAGAAATTTTCAGCCACCAACTGGGAGCCTTTaGGTGTCACAGGAACAGGCTGCTGTGCCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: YGRNFQPPTGSL*VSQEQAAVPLS
Trigger: GGACAGGGGCACAGCAGCCTGTTCCTGTGACACCCAAAGGCTCCCAGTTGGTGGCTGAAAATTTCTTCCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CCACCCGGAGTACGGAAGAAATTTTCAGCCACCAACTaGGAGCCTTTGGGTGTCACAGGAACAGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: PPGVRKKFSATN*EPLGVTGTGCC
Trigger: ACAGCAGCCTGTTCCTGTGACACCCAAAGGCTCCCAGTTGGTGGCTGAAAATTTCTTCCGTACTCCGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp ACCTCGTCCAGGCAGATGTCGTTATTCACAGCAGGGTaGGGGTACTTGGGGTACCGCGCTAGGAATTTGTGG +
Preference number: 6 (lower is better)
Translates to: TSSRQMSLFTAG*GYLGYRARNLW
Trigger: CCACAAATTCCTAGCGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAACGACATCTGCCTGGACGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp TTTAGTTGGCTCTGGCCCAGGACTGGCGAGTCATGGTaGGTGGCCCTCCTTTGCCGAGAGCTCAAGTTATCT +
Preference number: 6 (lower is better)
Translates to: FSWLWPRTGESW*VALLCRELKLS
Trigger: AGATAACTTGAGCTCTCGGCAAAGGAGGGCCACCAACCATGACTCGCCAGTCCTGGGCCAGAGCCAACTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp AGGGTTTTGGTGAGGTTGTGCCGGCCATGCCAAGTGTACCTGTTTTaGGCAAGGCGGCTCACCATGTGCAGGCTCTCTAGGACATTCACA +
Preference number: 6 (lower is better)
Translates to: RVLVRLCRPCQVYLF*ARRLTMCRLSRTFT
Trigger: TGTGAATGTCCTAGAGAGCCTGCACATGGTGAGCCGCCTTGCCAAAAACAGGTACACTTGGCATGGCCGGCACAACCTCACCAAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS TCA 72 bp GTTTCTTTACAGAACTGGGACCACTGTCCTCCGCGGTaGTCATCCTCTTTGTACCCCGATCTCCGGTCGTCT +
Preference number: 6 (lower is better)
Translates to: VSLQNWDHCPPR*SSSLYPDLRSS
Trigger: AGACGACCGGAGATCGGGGTACAAAGAGGATGATCACCGCGGAGGACAGTGGTCCCAGTTCTGTAAAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp GGCAGATGTCGTTATTCACAGCAGGGTTGGGGTACTTaGGGTACCGCGCTAGGAATTTGTGGCATAGCAACC +
Preference number: 6 (lower is better)
Translates to: GRCRYSQQGWGT*GTALGICGIAT
Trigger: GGTTGCTATGCCACAAATTCCTAGCGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAACGACATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS TCA 72 bp GGAGGTTTTGTTAGCACCATCGAAATCTGTGTAGGGTaGGCTGGTAGGCTTAGTTGGTCCACCCGGAGTACG +
Preference number: 6 (lower is better)
Translates to: GGFVSTIEICVG*AGRLSWSTRST
Trigger: CGTACTCCGGGTGGACCAACTAAGCCTACCAGCTCACCCTACACAGATTTCGATGGTGCTAACAAAACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp TGGGCTGTTCCCAACAGGTACGGCCGCCATAGATGTTaGGGAGACCATAAGTTTCAGAGGTGTCACATGGAA +
Preference number: 6 (lower is better)
Translates to: WAVPNRYGRHRC*GDHKFQRCHME
Trigger: TTCCATGTGACACCTCTGAAACTTATGGTCTCCCCAACATCTATGGCGGCCGTACCTGTTGGGAACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp AGGCAGATGTCGTTATTCACAGCAGGGTTGGGGTACTaGGGGTACCGCGCTAGGAATTTGTGGCATAGCAAC +
Preference number: 6 (lower is better)
Translates to: RQMSLFTAGLGY*GYRARNLWHSN
Trigger: GTTGCTATGCCACAAATTCCTAGCGCGGTACCCCAAGTACCCCAACCCTGCTGTGAATAACGACATCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp GAGGCAGGAAGAGGCATGATGGGGCTGGAACCACTGTaGTTTGGGCTGATTTCTGGGCCCGTCCATTTAAAA +
Preference number: 6 (lower is better)
Translates to: EAGRGMMGLEPL*FGLISGPVHLK
Trigger: TTTTAAATGGACGGGCCCAGAAATCAGCCCAAACAACAGTGGTTCCAGCCCCATCATGCCTCTTCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp ATCATCCTCTTTGTACCCCGATCTCCGGTCGTCTCCTaGCTTCGATGCTTAGCACCATGCCTTTCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: IILFVPRSPVVS*LRCLAPCLSGA
Trigger: AGCACCAGAAAGGCATGGTGCTAAGCATCGAAGCAAGGAGACGACCGGAGATCGGGGTACAAAGAGGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp GCCTCTAAGGAGGCAGGAAGAGGCATGATGGGGCTGGAACCACTGTaGTTTGGGCTGATTTCTGGGCCCGTCCATTTAAAAGCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: ASKEAGRGMMGLEPL*FGLISGPVHLKAGF
Trigger: AAAACCAGCTTTTAAATGGACGGGCCCAGAAATCAGCCCAAACAACAGTGGTTCCAGCCCCATCATGCCTCTTCCTGCCTCCTTAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp GCGGAACTGATCTTCCTCCGATCATTTTCTATGCTCTTTACCAACTaGATGAGGGACGGGTGTCGAGTGAAGCTGGGTTTCCCCCGCGTA +
Preference number: 6 (lower is better)
Translates to: AELIFLRSFSMLFTN*MRDGCRVKLGFPRV
Trigger: TACGCGGGGGAAACCCAGCTTCACTCGACACCCGTCCCTCATCAAGTTGGTAAAGAGCATAGAAAATGATCGGAGGAAGATCAGTTCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp AATAGCGGCGAGCTGAGCCATTTTGTTTGGGACGGGTGGAGAATTTaGAGAACTCTCAGCTTTGTTGCTCTTGACAGGGCTGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: NSGELSHFVWDGWRI*RTLSFVALDRAAGS
Trigger: GCTCCCAGCAGCCCTGTCAAGAGCAACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGTCCCAAACAAAATGGCTCAGCTCGCCGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp TCTACTCCAGGGAGTTCTACGAAGCACATGTCTGAATaGCCATTCTGGCCAGTGTGTGACTTGATCACGTGG +
Preference number: 6 (lower is better)
Translates to: STPGSSTKHMSE*PFWPVCDLITW
Trigger: CCACGTGATCAAGTCACACACTGGCCAGAATGGGCATTCAGACATGTGCTTCGTAGAACTCCCTGGAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp TTAGACAACACAGAGTCTGGCCCTAGGGATGAGCACTaGGTAAGAGGGATTAGGTATCCTGATGGGAACAGG +
Preference number: 6 (lower is better)
Translates to: LDNTESGPRDEH*VRGIRYPDGNR
Trigger: CCTGTTCCCATCAGGATACCTAATCCCTCTTACCCAGTGCTCATCCCTAGGGCCAGACTCTGTGTTGTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp GGTCCAGGGGAGCCAGTGGTTTGTAGTGCCCAGATCTaGCTAGGTTTACTTTCACTTTCTTCCTGGGTTCAC +
Preference number: 6 (lower is better)
Translates to: GPGEPVVCSAQI*LGLLSLSSWVH
Trigger: GTGAACCCAGGAAGAAAGTGAAAGTAAACCTAGCAAGATCTGGGCACTACAAACCACTGGCTCCCCTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CATAGCAACCCCAAGCTCTTCTCCTTCCGACTCGGCTaGGATTTCTCAAATTCGTCTCCTGATAAGTGTTCG +
Preference number: 6 (lower is better)
Translates to: HSNPKLFSFRLG*DFSNSSPDKCS
Trigger: CGAACACTTATCAGGAGACGAATTTGAGAAATCCCAGCCGAGTCGGAAGGAGAAGAGCTTGGGGTTGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp CCAGATCTTCCACGTGGTCTTCCCCAATTAAAATCTTaGCAGCAATTTCCAGGCTCACTATCTGAGGCGTCG +
Preference number: 6 (lower is better)
Translates to: PDLPRGLPQLKS*QQFPGSLSEAS
Trigger: CGACGCCTCAGATAGTGAGCCTGGAAATTGCTGCCAAGATTTTAATTGGGGAAGACCACGTGGAAGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp TCTTTCCTTTTGATCATCATGATCTGCTCAGCGTACTaGTTCTCTTCCCCGACACTCTTCAGCGTCCCGAGG +
Preference number: 6 (lower is better)
Translates to: SFLLIIMICSAY*FSSPTLFSVPR
Trigger: CCTCGGGACGCTGAAGAGTGTCGGGGAAGAGAACAAGTACGCTGAGCAGATCATGATGATCAAAAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp GAGCTGAGCCATTTTGTTTGGGACGGGTGGAGAATTTaGAGAACTCTCAGCTTTGTTGCTCTTGACAGGGCT +
Preference number: 6 (lower is better)
Translates to: ELSHFVWDGWRI*RTLSFVALDRA
Trigger: AGCCCTGTCAAGAGCAACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGTCCCAAACAAAATGGCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp TCTACGAAGCACATGTCTGAATGCCCATTCTGGCCAGTGTGTGACTaGATCACGTGGTCCTCTATGCCACAGCTCTTGATAAAATCAAAC +
Preference number: 6 (lower is better)
Translates to: STKHMSECPFWPVCD*ITWSSMPQLLIKSN
Trigger: GTTTGATTTTATCAAGAGCTGTGGCATAGAGGACCACGTGATCAAGTCACACACTGGCCAGAATGGGCATTCAGACATGTGCTTCGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp GAATGCCCATTCTGGCCAGTGTGTGACTTGATCACGTaGTCCTCTATGCCACAGCTCTTGATAAAATCAAAC +
Preference number: 6 (lower is better)
Translates to: ECPFWPVCDLIT*SSMPQLLIKSN
Trigger: GTTTGATTTTATCAAGAGCTGTGGCATAGAGGACCACGTGATCAAGTCACACACTGGCCAGAATGGGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp AATAGCGGCGAGCTGAGCCATTTTGTTTGGGACGGGTaGAGAATTTTGAGAACTCTCAGCTTTGTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: NSGELSHFVWDG*RILRTLSFVAL
Trigger: AAGAGCAACAAAGCTGAGAGTTCTCAAAATTCTCCACCCGTCCCAAACAAAATGGCTCAGCTCGCCGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 72 bp ATCTTCCTCCGATCATTTTCTATGCTCTTTACCAACTaGATGAGGGACGGGTGTCGAGTGAAGCTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: IFLRSFSMLFTN*MRDGCRVKLGF
Trigger: GAAACCCAGCTTCACTCGACACCCGTCCCTCATCAAGTTGGTAAAGAGCATAGAAAATGATCGGAGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS TCA 72 bp ATTAAAATCTTGGCAGCAATTTCCAGGCTCACTATCTaGGGCGTCGACACCAAGAACAGCATCACAAACTTC +
Preference number: 6 (lower is better)
Translates to: IKILAAISRLTI*GVDTKNSITNF
Trigger: GAAGTTTGTGATGCTGTTCTTGGTGTCGACGCCTCAGATAGTGAGCCTGGAAATTGCTGCCAAGATTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS GCA 72 bp TCTTGCTCATATTCTTTCCTTTTGATCATCATGATCTaGTCAGCGTACTTGTTCTCTTCCCCGACACTCTTC +
Preference number: 6 (lower is better)
Translates to: SCSYSFLLIIMI*SAYLFSSPTLF
Trigger: GAAGAGTGTCGGGGAAGAGAACAAGTACGCTGAGCAGATCATGATGATCAAAAGGAAAGAATATGAGCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp TGGCCAGTGTGTGACTTGATCACGTGGTCCTCTATGCCACAGCTCTaGATAAAATCAAACTCTTGCTCATATTCTTTCCTTTTGATCATC +
Preference number: 6 (lower is better)
Translates to: WPVCDLITWSSMPQL*IKSNSCSYSFLLII
Trigger: GATGATCAAAAGGAAAGAATATGAGCAAGAGTTTGATTTTATCAAGAGCTGTGGCATAGAGGACCACGTGATCAAGTCACACACTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CAA 90 bp CCACAGCTCTTGATAAAATCAAACTCTTGCTCATATTCTTTCCTTTaGATCATCATGATCTGCTCAGCGTACTTGTTCTCTTCCCCGACA +
Preference number: 6 (lower is better)
Translates to: PQLLIKSNSCSYSFL*IIMICSAYLFSSPT
Trigger: TGTCGGGGAAGAGAACAAGTACGCTGAGCAGATCATGATGATCAAAAGGAAAGAATATGAGCAAGAGTTTGATTTTATCAAGAGCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2
CDS CCA 72 bp TTAAAAGCTGGTTTTCGACCTCTTTCTTCTGTAACATaGACTTTCTTGATAAGATCCAAGCTACTCAGGACA +
Preference number: 6 (lower is better)
Translates to: LKAGFRPLSSVT*TFLIRSKLLRT
Trigger: TGTCCTGAGTAGCTTGGATCTTATCAAGAAAGTCCATGTTACAGAAGAAAGAGGTCGAAAACCAGCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058745.15
ENSMUST00000119223.2