Pregenerated sensors for E2F6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057469Ensembl transcript IDs: ENSMUST00000020908.9, ENSMUST00000220794.2, ENSMUST00000221541.2, ENSMUST00000221934.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGACCAAGGGCAGCGAAGAGTTATCTCGAGAGCTGATTCTGGATaGGGAACCCATCAGGACCCCGTGCTGGAGGCGACTCGGGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: TDQGQRRVISRADSG*GTHQDPVLEATREN Trigger: GTTCTCCCGAGTCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGAGATAACTCTTCGCTGCCCTTGGTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR TCA 90 bp | CTCCAAAAACCTTCGTCACTCTGCACTGCTACTAGCCGCTCACTCTaGGTTCTTCACTCACTGAGGAGGCTCGTCTTCTTTCTCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LQKPSSLCTATSRSL*VLHSLRRLVFFLWA Trigger: TGCCCAGAGAAAGAAGACGAGCCTCCTCAGTGAGTGAAGAACTCAGAGTGAGCGGCTAGTAGCAGTGCAGAGTGACGAAGGTTTTTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR TCA 90 bp | CACTTGTCTTGGACTAGGCGTGGTACAAGGCGCTGGGAGCCACTATaGACAATTGTCTCTCACGGAGCTCACAGTCTAGTGGTAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: HLSWTRRGTRRWEPL*TIVSHGAHSLVVND Trigger: GTCATTTACCACTAGACTGTGAGCTCCGTGAGAGACAATTGTTCATAGTGGCTCCCAGCGCCTTGTACCACGCCTAGTCCAAGACAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020908.9 ENSMUST00000221541.2 |
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| 3UTR TCA 90 bp | ACTATGAACAATTGTCTCTCACGGAGCTCACAGTCTAGTGGTAAATaGCTGAGGCAATTGAGGCACAGAGAGGTAAGTGACTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: TMNNCLSRSSQSSGK*LRQLRHREVSDLPT Trigger: AGTGGGTAAGTCACTTACCTCTCTGTGCCTCAATTGCCTCAGTCATTTACCACTAGACTGTGAGCTCCGTGAGAGACAATTGTTCATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020908.9 ENSMUST00000221541.2 |
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| 3UTR GCA 90 bp | TTTAACTTCACCAGGACCAAATCACATTGTAGTGAACTGATCTGTTaGCAGATGAAAGTCTGTACTTTCCCACAATGCTTTGAGGCATGC | + |
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Preference number: 1 (lower is better) Translates to: FNFTRTKSHCSELIC*QMKVCTFPQCFEAC Trigger: GCATGCCTCAAAGCATTGTGGGAAAGTACAGACTTTCATCTGGCAACAGATCAGTTCACTACAATGTGATTTGGTCCTGGTGAAGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGCCGACAGGTCGGAGAGTTCTGCCTGCAGCTTCTTCTGCTGGGGTGCGGCATCAGGACCCCGTGCTaGAGGCGACTCGGGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: HGRQVGEFCLQLLLLGCGIRTPC*RRLGRT Trigger: TGTTCTCCCGAGTCGCCTCCAGCACGGGGTCCTGAT...GCCGCACCCCAGCAGAAGAAGCTGCAGGCAGAACTCTCCGACCTGTCGGCCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | TCGAGAGCTGATTCTGGATGGGGAACCCATCAGGACCCCGTGCTGGAGGCGACTATCAGGACCCCGTGCTaGAGGCGACTCGGGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: SRADSGWGTHQDPVLEATIRTPC*RRLGRT Trigger: TGTTCTCCCGAGTCGCCTCCAGCACGGGGTCCTGAT...AGTCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAGAGCTGATTCTGGATGGGGAACCCATCAGGACCCCGTGCTGGAGGCGACTGGAGGTAAGGCCCTCTaGCTGAAGAGCAAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SRADSGWGTHQDPVLEATGGKAL*LKSKAA Trigger: TGCAGCCTTGCTCTTCAGTCAGAGGGCCTTACCTCC...AGTCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTCGGAGAGTTCTGCCTGCAGCTTCTTCTGCTGGGGTGCGGCCCCAAAGTCTGCCTCCCAAGGACTaGCATTACAGAACTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TGRRVLPAASSAGVRPQSLPPKD*HYRTGP Trigger: TGGCCCAGTTCTGTAATGCCAGTCCTTGGGAGGCAG...ACTTTGGGGCCGCACCCCAGCAGAAGAAGCTGCAGGCAGAACTCTCCGACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221934.2 |
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| 3UTR CAA 90 bp | GCGCTCCAGCAGCTCATAGATGAGGTAAATGCTGGAGCCACCACCTaGGCCACGCCCTTTGACGCGGTTGAAAGGGATGTCCAAATCCAC | + |
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Preference number: 2 (lower is better) Translates to: ALQQLIDEVNAGATT*ATPFDAVERDVQIH Trigger: GTGGATTTGGACATCCCTTTCAACCGCGTCAAAGGGCGTGGCCAAGGTGGTGGCTCCAGCATTTACCTCATCTATGAGCTGCTGGAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTTCGGTGCGGCTACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGATCGGAGAGTTCTGCCTaGAGCTTCTTCTGCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GLRCGYQSTIEHKSTPRRSESSA*SFFCWG Trigger: ACCCCAGCAGAAGAAGCTGCAGGCAGAACTCTCCGA...TCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTAGCCGCACCGAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTGAAGCGCTCCAGCAGCTCATAGATGAGGTAAATGCTGGAGCCACCACCGTAAGGCCCTCTGACTaGAGAGCAAGGCTGCACACA | + |
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Preference number: 2 (lower is better) Translates to: SLEALQQLIDEVNAGATTVRPSD*RARLHT Trigger: TGTGTGCAGCCTTGCTCTTCAGTCAGAGGGCCTTAC...GGTGGTGGCTCCAGCATTTACCTCATCTATGAGCTGCTGGAGCGCTTCAAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAGAGCTGATTCTGGATGGGGAACCCATCAGGACCCCGTGCTGGAGGCGACTGAGGAGACTTATTGCTaGAAATCAAACGATGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SRADSGWGTHQDPVLEATEETYC*KSNDGH Trigger: GTGCCCATCGTTTGATTTTCAGCAATAAGTCTCCTC...AGTCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTGAAGCGCTCCAGCAGCTCATAGATGAGGTAAATGCTGGAGCCACCACCACTAGCCGCTCACTCTaGGTTCTTCACTCACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLEALQQLIDEVNAGATTTSRSL*VLHSLR Trigger: CCTCAGTGAGTGAAGAACTCAGAGTGAGCGGCTAGT...GGTGGTGGCTCCAGCATTTACCTCATCTATGAGCTGCTGGAGCGCTTCAAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAAACCTTCGTCACTCTGCACTGCTACTAGCCGCTCACTCTGAGTTCTTCATCAGGACCCCGTGCTaGAGGCGACTCGGGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: SKNLRHSALLLAAHSEFFIRTPC*RRLGRT Trigger: TGTTCTCCCGAGTCGCCTCCAGCACGGGGTCCTGAT...GAAGAACTCAGAGTGAGCGGCTAGTAGCAGTGCAGAGTGACGAAGGTTTTTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTTCTGCCTGCAGCTTCTTCTGCTGGGGTGCGGCCCCAAAGTTGTTCAGGGAGGAGACTTATTGCTaGAAATCAAACGATGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: ESSACSFFCWGAAPKLFREETYC*KSNDGH Trigger: GTGCCCATCGTTTGATTTTCAGCAATAAGTCTCCTC...CCTGAACAACTTTGGGGCCGCACCCCAGCAGAAGAAGCTGCAGGCAGAACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCGTCTTCCATGGCCGACAGGTCGGAGAGTTCTGCCTGCAGCTTCTTCTGCTGAGGAGACTTATTGCTaGAAATCAAACGATGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RRLPWPTGRRVLPAASSAEETYC*KSNDGH Trigger: GTGCCCATCGTTTGATTTTCAGCAATAAGTCTCCTC...AGCAGAAGAAGCTGCAGGCAGAACTCTCCGACCTGTCGGCCATGGAAGACGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | TCGAGAGCTGATTCTGGATGGGGAACCCATCAGGACCCCGTGCTGGAGGCGACTGTCTTTGTGATAACATaGTTTCAGGAGGCAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: SRADSGWGTHQDPVLEATVFVIT*FQEARG Trigger: ACCTCTTGCCTCCTGAAATCATGTTATCACAAAGAC...AGTCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAGTCCACGACCAGCTGTCCAGCTGTCTGTCCTTATGCTAGTCTTTGTGATAGAGCTGATTCTGGATaGGGAACCCATCAGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: AQSTTSCPAVCPYASLCDRADSG*GTHQDP Trigger: GGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCT...ATCACAAAGACTAGCATAAGGACAGACAGCTGGACAGCTGGTCGTGGACTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTCACTGAGGAGGCTCGTCTTCTTTCTCTGGGCATTGTGGATGGCTGCTTTCAAACGATGGGCACATaGTTCACCCACACTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: SLTEEARLLSLGIVDGCFQTMGT*FTHTGW Trigger: CCATCCAGTGTGGGTGAATCATGTGCCCATCGTTTG...AAAGCAGCCATCCACAATGCCCAGAGAAAGAAGACGAGCCTCCTCAGTGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCGGCTACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCACTAGCCGCTCACTCTaGGTTCTTCACTCACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VRLPVYNRAQEHSEETYCTSRSL*VLHSLR Trigger: CCTCAGTGAGTGAAGAACTCAGAGTGAGCGGCTAGT...GCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTAGCCGCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR GCA 90 bp | CATGATTCACCCACTCGGGATACTCCAAAAACCTTCGTCACTCTGCACTGCTACATTTGGCCCCGTGTGTaGACCTCACCAGTGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: HDSPTRDTPKTFVTLHCYIWPRV*TSPVHN Trigger: GTTGTGCACTGGTGAGGTGCACACACGGGGCCAAAT...GTAGCAGTGCAGAGTGACGAAGGTTTTTGGAGTATCCCGAGTGGGTGAATCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGAGTTCTTCACTCACTGAGGAGGCTCGTCTTCTTTCTCTGGGCATTGTGCTTCTTCTGCTGGGGTaGGGCCCCAAAGTTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: TLSSSLTEEARLLSLGIVLLLLG*GPKVVQ Trigger: CTGAACAACTTTGGGGCCGCACCCCAGCAGAAGAAG...CACAATGCCCAGAGAAAGAAGACGAGCCTCCTCAGTGAGTGAAGAACTCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGTCCACGACCAGCTGTCCAGCTGTCTGTCCTTATGCTAGTCTTTGTGATACAAACGATGGGCACATaGTTCACCCACACTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: HSPRPAVQLSVLMLVFVIQTMGT*FTHTGW Trigger: CCATCCAGTGTGGGTGAATCATGTGCCCATCGTTTG...TATCACAAAGACTAGCATAAGGACAGACAGCTGGACAGCTGGTCGTGGACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCTACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCCTCGTCTTCTTTCTCTaGGCATTGTGGATGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VRLPVYNRAQEHSEETYCLVFFL*ALWMAA Trigger: AGCAGCCATCCACAATGCCCAGAGAAAGAAGACGAG...GCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTAGCCGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCGAGAGCTGATTCTGGATGGGGAACCCATCAGGACCCCGTGCTGGAGGCGATCAGAGCTTTTCTCATaGACACATACTGTACATTTT | + |
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Preference number: 2 (lower is better) Translates to: SRELILDGEPIRTPCWRRSELFS*THTVHF Trigger: AAAATGTACAGTATGTGTCCATGAGAAAAGCTCTGA...TCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGTCTGTCCTTATGCTAGTCTTTGTGATAACATGATTTCAGGAGGCAAGAGAGCTGATTCTGGATaGGGAACCCATCAGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: PAVCPYASLCDNMISGGKRADSG*GTHQDP Trigger: GGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCT...CTTGCCTCCTGAAATCATGTTATCACAAAGACTAGCATAAGGACAGACAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCGGCTACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCAAGGCAATTCTTCTGTaGGGCAAACACTATCCATCA | + |
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Preference number: 2 (lower is better) Translates to: VRLPVYNRAQEHSEETYCKAILL*GKHYPS Trigger: TGATGGATAGTGTTTGCCTCACAGAAGAATTGCCTT...GCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTAGCCGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR GCA 90 bp | TACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCTGAAAATATTTGGCCCCGTGTGTaGACCTCACCAGTGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: YQSTIEHKSTPRRLIAENIWPRV*TSPVHN Trigger: GTTGTGCACTGGTGAGGTGCACACACGGGGCCAAAT...ATTTTCAGCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTGTCTGTCCTTATGCTAGTCTTTGTGATAACATGATTTCAGGAGGCAAGGCATCCTTCTGTCTCTaGCTCCCAAGGACTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: PAVCPYASLCDNMISGGKASFCL*LPRTGI Trigger: AATGCCAGTCCTTGGGAGGCAGAGACAGAAGGATGC...CTTGCCTCCTGAAATCATGTTATCACAAAGACTAGCATAAGGACAGACAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR-3UTR GCA 90 bp | GCACAGTCCACGACCAGCTGTCCAGCTGTCTGTCCTTATGCTAGTCTTTGTGATAGTGAACTGATCTGTTaGCAGATGAAAGTCTGTACT | + |
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Preference number: 2 (lower is better) Translates to: AQSTTSCPAVCPYASLCDSELIC*QMKVCT Trigger: AGTACAGACTTTCATCTGGCAACAGATCAGTTCACT...ATCACAAAGACTAGCATAAGGACAGACAGCTGGACAGCTGGTCGTGGACTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGAGTTCTTCACTCACTGAGGAGGCTCGTCTTCTTTCTCTGGGCATTGTGAACTCCAACAGTTGCTaGGCACAATCTTTAATCAAC | + |
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Preference number: 2 (lower is better) Translates to: TLSSSLTEEARLLSLGIVNSNSC*AQSLIN Trigger: GTTGATTAAAGATTGTGCTCAGCAACTGTTGGAGTT...CACAATGCCCAGAGAAAGAAGACGAGCCTCCTCAGTGAGTGAAGAACTCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTATTTCAAGCTGCTTCAAATCTTTTGTAAAGCAGGAGAGGTTTACCAAACTGGAGGTAAGGCCCTCTaGCTGAAGAGCAAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CYFKLLQIFCKAGEVYQTGGKAL*LKSKAA Trigger: TGCAGCCTTGCTCTTCAGTCAGAGGGCCTTACCTCC...AGTTTGGTAAACCTCTCCTGCTTTACAAAAGATTTGAAGCAGCTTGAAATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020908.9 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCTACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCGTTTTACCATTTGAATaGTTCTGTTCTACTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: VRLPVYNRAQEHSEETYCVLPFE*FCSTSH Trigger: GTGTGAAGTAGAACAGAACCATTCAAATGGTAAAAC...GCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTAGCCGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CCA 90 bp | CATGATTCACCCACTCGGGATACTCCAAAAACCTTCGTCACTCTGCACTGCTACTCAGAGCTTTTCTCATaGACACATACTGTACATTTT | + |
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Preference number: 2 (lower is better) Translates to: HDSPTRDTPKTFVTLHCYSELFS*THTVHF Trigger: AAAATGTACAGTATGTGTCCATGAGAAAAGCTCTGA...GTAGCAGTGCAGAGTGACGAAGGTTTTTGGAGTATCCCGAGTGGGTGAATCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCTGAAAATCAAAAGGCAATTCTTCTGTaGGGCAAACACTATCCATCA | + |
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Preference number: 2 (lower is better) Translates to: QSTIEHKSTPRRLIAENQKAILL*GKHYPS Trigger: TGATGGATAGTGTTTGCCTCACAGAAGAATTGCCTT...TTGATTTTCAGCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTATTTCAAGCTGCTTCAAATCTTTTGTAAAGCAGGAGAGGTTTACCAAACTACTGAAGAGCAAGGCTaGACACAGAAACACATTATA | + |
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Preference number: 2 (lower is better) Translates to: CYFKLLQIFCKAGEVYQTTEEQG*TQKHII Trigger: TATAATGTGTTTCTGTGTGCAGCCTTGCTCTTCAGT...AGTTTGGTAAACCTCTCCTGCTTTACAAAAGATTTGAAGCAGCTTGAAATAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020908.9 ENSMUST00000221541.2 |
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| 3UTR CCA 72 bp | GGGCAGCGAAGAGTTATCTCGAGAGCTGATTCTGGATaGGGAACCCATCAGGACCCCGTGCTGGAGGCGACT | + |
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Preference number: 3 (lower is better) Translates to: GQRRVISRADSG*GTHQDPVLEAT Trigger: AGTCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGAGATAACTCTTCGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR TCA 72 bp | TGGACTAGGCGTGGTACAAGGCGCTGGGAGCCACTATaGACAATTGTCTCTCACGGAGCTCACAGTCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: WTRRGTRRWEPL*TIVSHGAHSLV Trigger: CACTAGACTGTGAGCTCCGTGAGAGACAATTGTTCATAGTGGCTCCCAGCGCCTTGTACCACGCCTAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020908.9 ENSMUST00000221541.2 |
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| 3UTR TCA 72 bp | CTGCTACTAGCCGCTCACTCTGAGTTCTTCACTCACTaGGGAGGCTCGTCTTCTTTCTCTGGGCATTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: LLLAAHSEFFTH*GGSSSFSGHCG Trigger: TCCACAATGCCCAGAGAAAGAAGACGAGCCTCCTCAGTGAGTGAAGAACTCAGAGTGAGCGGCTAGTAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR TCA 72 bp | CCTTCGTCACTCTGCACTGCTACTAGCCGCTCACTCTaGGTTCTTCACTCACTGAGGAGGCTCGTCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: PSSLCTATSRSL*VLHSLRRLVFF Trigger: AAAGAAGACGAGCCTCCTCAGTGAGTGAAGAACTCAGAGTGAGCGGCTAGTAGCAGTGCAGAGTGACGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR CCA 72 bp | GTTCGAGGCCTCTGGCTTCTGCTACACCATCAGTACTaGATCCTCACCAAGACTCCTCTCAGATCTCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: VRGLWLLLHHQY*ILTKTPLRSPV Trigger: AACAGGAGATCTGAGAGGAGTCTTGGTGAGGATCCAGTACTGATGGTGTAGCAGAAGCCAGAGGCCTCGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR GCA 72 bp | CCTTTTGTCCACACATCTGTACTTGCAAATGTTCACTaGCATGAGTCTTTGGCCTGGTTCGAGGCCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PFVHTSVLANVH*HESLAWFEASG Trigger: GCCAGAGGCCTCGAACCAGGCCAAAGACTCATGGCAGTGAACATTTGCAAGTACAGATGTGTGGACAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR CCA 72 bp | TCACTGAGGAGGCTCGTCTTCTTTCTCTGGGCATTGTaGATGGCTGCTTTTAGATGGAGAGGCTCCTATTCC | + |
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Preference number: 3 (lower is better) Translates to: SLRRLVFFLWAL*MAAFRWRGSYS Trigger: GGAATAGGAGCCTCTCCATCTAAAAGCAGCCATCCACAATGCCCAGAGAAAGAAGACGAGCCTCCTCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR CCA 72 bp | AGACTCCTCTCAGATCTCCTGTTGTTGCTTGTGGCTTaGAGATCCCACAGCTTTGGGTCTGTAGGACTCATC | + |
|
Preference number: 3 (lower is better) Translates to: RLLSDLLLLLVA*RSHSFGSVGLI Trigger: GATGAGTCCTACAGACCCAAAGCTGTGGGATCTCCAAGCCACAAGCAACAACAGGAGATCTGAGAGGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR TCA 72 bp | AATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCTaGAAATCAAACGATGGGCACATGATTCACCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: NRAQEHSEETYC*KSNDGHMIHPH Trigger: GTGTGGGTGAATCATGTGCCCATCGTTTGATTTTCAGCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTGTCTGTCCTTATGCTAGTCTTTGTGATAACATGATTTCAGGAGGCAAGTCCGAACACCCAGTTTaGTGGCAACTTTGTTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PAVCPYASLCDNMISGGKSEHPV*WQLCLS Trigger: ACTTAAACAAAGTTGCCACAAAACTGGGTGTTCGGA...CTTGCCTCCTGAAATCATGTTATCACAAAGACTAGCATAAGGACAGACAGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR GCA 72 bp | ACCAGGACCAAATCACATTGTAGTGAACTGATCTGTTaGCAGATGAAAGTCTGTACTTTCCCACAATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TRTKSHCSELIC*QMKVCTFPQCF Trigger: AAAGCATTGTGGGAAAGTACAGACTTTCATCTGGCAACAGATCAGTTCACTACAATGTGATTTGGTCCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| CDS-3UTR GCA 90 bp | AGGCGTCTTCCATGGCCGACAGGTCGGAGAGTTCTGCCTGCAGCTTCTTCTGCTCGGCGCACCGTTTCCTaGGCCGGGTCCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLPWPTGRRVLPAASSARRTVS*AGSTSR Trigger: CCTGCTGGTGGACCCGGCGCAGGAAACGGTGCGCCG...AGCAGAAGAAGCTGCAGGCAGAACTCTCCGACCTGTCGGCCATGGAAGACGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 ENSMUST00000221934.2 |
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| CDS-3UTR GCA 90 bp | TTCACCCACTCGGGATACTCCAAAAACCTTCGTCACTCTGCACTGCTACTAGCCCGGCGCACCGTTTCCTaGGCCGGGTCCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTHSGYSKNLRHSALLLARRTVS*AGSTSR Trigger: CCTGCTGGTGGACCCGGCGCAGGAAACGGTGCGCCG...GGCTAGTAGCAGTGCAGAGTGACGAAGGTTTTTGGAGTATCCCGAGTGGGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| CDS-3UTR CCA 90 bp | GGATCCTCACCAAGACTCCTCTCAGATCTCCTGTTGTTGCTTGTGGCTTGGAGAGGTCCACCAGCAGGCTaGGCTGTCTCCGCGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSPRLLSDLLLLLVAWRGPPAG*AVSAPS Trigger: GGACGGCGCGGAGACAGCCCAGCCTGCTGGTGGACC...TCTCCAAGCCACAAGCAACAACAGGAGATCTGAGAGGAGTCTTGGTGAGGATCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| CDS-3UTR GCA 90 bp | TCGAGAGCTGATTCTGGATGGGGAACCCATCAGGACCCCGTGCTGGAGGCGACTCAGGTCGGAGAGTTCTaGCTGCAGCTTCTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRADSGWGTHQDPVLEATQVGEF*LQLLLL Trigger: CAGCAGAAGAAGCTGCAGGCAGAACTCTCCGACCTG...AGTCGCCTCCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS-3UTR CCA 90 bp | ATGCCCCCAGGGGCAGATCTGACGAGATCCATAAACTTCCGAGTTAAGTATACCGGTCCACCAGCAGGCTaGGCTGTCTCCGCGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPPGADLTRSINFRVKYTGPPAG*AVSAPS Trigger: GGACGGCGCGGAGACAGCCCAGCCTGCTGGTGGACC...GGTATACTTAACTCGGAAGTTTATGGATCTCGTCAGATCTGCCCCTGGGGGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 ENSMUST00000221934.2 |
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| 3UTR CAA 72 bp | CTGGAGCCACCACCTTGGCCACGCCCTTTGACGCGGTaGAAAGGGATGTCCAAATCCACTGAGGTAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEPPPWPRPLTR*KGMSKSTEVES Trigger: GCTCTCTACCTCAGTGGATTTGGACATCCCTTTCAACCGCGTCAAAGGGCGTGGCCAAGGTGGTGGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| CDS-3UTR GCA 90 bp | GCAGATCTGACGAGATCCATAAACTTCCGAGTTAAGTATACCAGTGACACATCACGGCGCACCGTTTCCTaGGCCGGGTCCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADLTRSINFRVKYTSDTSRRTVS*AGSTSR Trigger: CCTGCTGGTGGACCCGGCGCAGGAAACGGTGCGCCG...TGATGTGTCACTGGTATACTTAACTCGGAAGTTTATGGATCTCGTCAGATCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 ENSMUST00000221934.2 |
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| CDS-3UTR GCA 90 bp | ACAAAAAGCGGAATAATGCTTTTAACTTCACCAGGACCAAATCACATTGTAGTGCGGCGCACCGTTTCCTaGGCCGGGTCCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSGIMLLTSPGPNHIVVRRTVS*AGSTSR Trigger: CCTGCTGGTGGACCCGGCGCAGGAAACGGTGCGCCG...CACTACAATGTGATTTGGTCCTGGTGAAGTTAAAAGCATTATTCCGCTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| CDS-3UTR CCA 90 bp | CATGATGACTCTGTAGGCAGCTTAAAAATCAAGAAGTTTGTGGTTCCAATTGTAGGTCCACCAGCAGGCTaGGCTGTCTCCGCGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HDDSVGSLKIKKFVVPIVGPPAG*AVSAPS Trigger: GGACGGCGCGGAGACAGCCCAGCCTGCTGGTGGACC...TACAATTGGAACCACAAACTTCTTGATTTTTAAGCTGCCTACAGAGTCATCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR CAA 72 bp | CACTCACTGAGGAGGCTCGTCTTCTTTCTCTGGGCATaGTGGATGGCTGCTTTTAGATGGAGAGGCTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSLRRLVFFLWA*WMAAFRWRGSY Trigger: ATAGGAGCCTCTCCATCTAAAAGCAGCCATCCACAATGCCCAGAGAAAGAAGACGAGCCTCCTCAGTGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| 3UTR CAA 72 bp | ACATCTGTACTTGCAAATGTTCACTGCCATGAGTCTTaGGCCTGGTTCGAGGCCTCTGGCTTCTGCTACACC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLANVHCHES*AWFEASGFCYT Trigger: GGTGTAGCAGAAGCCAGAGGCCTCGAACCAGGCCAAAGACTCATGGCAGTGAACATTTGCAAGTACAGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| 3UTR CAA 72 bp | AAGACTCCTCTCAGATCTCCTGTTGTTGCTTGTGGCTaGGAGATCCCACAGCTTTGGGTCTGTAGGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTPLRSPVVACG*EIPQLWVCRTH Trigger: ATGAGTCCTACAGACCCAAAGCTGTGGGATCTCCAAGCCACAAGCAACAACAGGAGATCTGAGAGGAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCTGAAAATCAATCGGAGAGTTCTGCCTaGAGCTTCTTCTGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSTIEHKSTPRRLIAENQSESSA*SFFCWG Trigger: ACCCCAGCAGAAGAAGCTGCAGGCAGAACTCTCCGA...TTGATTTTCAGCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS-3UTR CCA 90 bp | GGCCTTCGGTGCGGCTACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGAGTTTTACCATTTGAATaGTTCTGTTCTACTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLRCGYQSTIEHKSTPRRVLPFE*FCSTSH Trigger: GTGTGAAGTAGAACAGAACCATTCAAATGGTAAAAC...TCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTAGCCGCACCGAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS-3UTR CCA 90 bp | GGCAGCTTAAAAATCAAGAAGTTTGTGGTTCCAATTGTAGCACTGGGGAGCGTACTCGTCTTCTTTCTCTaGGCATTGTGGATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLKIKKFVVPIVALGSVLVFFL*ALWMAA Trigger: AGCAGCCATCCACAATGCCCAGAGAAAGAAGACGAG...TACGCTCCCCAGTGCTACAATTGGAACCACAAACTTCTTGATTTTTAAGCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS-3UTR GCA 90 bp | CATGATGACTCTGTAGGCAGCTTAAAAATCAAGAAGTTTGTGGTTCCAATTGTACTTCTTCTGCTGGGGTaGGGCCCCAAAGTTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDDSVGSLKIKKFVVPIVLLLLG*GPKVVQ Trigger: CTGAACAACTTTGGGGCCGCACCCCAGCAGAAGAAG...TACAATTGGAACCACAAACTTCTTGATTTTTAAGCTGCCTACAGAGTCATCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS-3UTR CCA 90 bp | TTCACCCACTCGGGATACTCCAAAAACCTTCGTCACTCTGCACTGCTACTAGCCCTCCTATTCCATCATTaGTTTTACCATTTGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTHSGYSKNLRHSALLLALLFHH*FYHLNG Trigger: ACCATTCAAATGGTAAAACCAATGATGGAATAGGAG...GGCTAGTAGCAGTGCAGAGTGACGAAGGTTTTTGGAGTATCCCGAGTGGGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| 3UTR CAA 72 bp | TGTAGTGTGTCACAGTGTGTCCCACAGTATATCCTTTaGTCCACACATCTGTACTTGCAAATGTTCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSQCVPQYIL*STHLYLQMFTA Trigger: GGCAGTGAACATTTGCAAGTACAGATGTGTGGACAAAAGGATATACTGTGGGACACACTGTGACACACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| CDS-3UTR TCA 90 bp | CAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCTGAAAATCAAAACTCCAACAGTTGCTaGGCACAATCTTTAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSTIEHKSTPRRLIAENQNSNSC*AQSLIN Trigger: GTTGATTAAAGATTGTGCTCAGCAACTGTTGGAGTT...TTGATTTTCAGCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS-3UTR CCA 90 bp | TACCAGTCTACAATAGAGCACAAGAGCACTCCGAGGAGACTTATTGCTGAAAATTCAGAGCTTTTCTCATaGACACATACTGTACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQSTIEHKSTPRRLIAENSELFS*THTVHF Trigger: AAAATGTACAGTATGTGTCCATGAGAAAAGCTCTGA...ATTTTCAGCAATAAGTCTCCTCGGAGTGCTCTTGTGCTCTATTGTAGACTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS GCA 90 bp | TTTTCCACGTTGATGGGGTCTCGGCAACGCCGGCGCACCGTTTCCTaGGCCGGGTCCACCAGCAGGCTGGGCTGTCTCCGCGCCGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTLMGSRQRRRTVS*AGSTSRLGCLRAVR Trigger: GCGGACGGCGCGGAGACAGCCCAGCCTGCTGGTGGACCCGGCGCAGGAAACGGTGCGCCGGCGTTGCCGAGACCCCATCAACGTGGAAAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 ENSMUST00000221934.2 |
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| CDS TCA 90 bp | GAACTGGGCCACCACACCTGGCTAGAAGCAGTAGGTTTTCCACGTTaGTGGGGTCTCGGCAACGCCGGCGCACCGTTTCCTGCGCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELGHHTWLEAVGFPR*WGLGNAGAPFPAPG Trigger: ACCCGGCGCAGGAAACGGTGCGCCGGCGTTGCCGAGACCCCATCAACGTGGAAAACCTACTGCTTCTAGCCAGGTGTGGTGGCCCAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221541.2 |
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| CDS-3UTR CAA 90 bp | CGTCTTCCATGGCCGACAGGTCGGAGAGTTCTGCCTGCAGCTTCTTCTGCTGGGAGTAGGTTTTCCACGTaGATGGGGTCTCGGCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: RLPWPTGRRVLPAASSAGSRFST*MGSRQR Trigger: GCGTTGCCGAGACCCCATCAACGTGGAAAACCTACT...CCCAGCAGAAGAAGCTGCAGGCAGAACTCTCCGACCTGTCGGCCATGGAAGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 ENSMUST00000221934.2 |
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| CDS-3UTR CAA 90 bp | GAGTTATCTCGAGAGCTGATTCTGGATGGGGAACCCATCAGGACCCCGTGCTGGAGTAGGTTTTCCACGTaGATGGGGTCTCGGCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: ELSRELILDGEPIRTPCWSRFST*MGSRQR Trigger: GCGTTGCCGAGACCCCATCAACGTGGAAAACCTACT...CCAGCACGGGGTCCTGATGGGTTCCCCATCCAGAATCAGCTCTCGAGATAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 |
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| CDS-3UTR CAA 90 bp | TTCCGAGTTAAGTATACCAGTGACACATCAAACCGGGGCCTCTTCACTTTCAGAAGTAGGTTTTCCACGTaGATGGGGTCTCGGCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: FRVKYTSDTSNRGLFTFRSRFST*MGSRQR Trigger: GCGTTGCCGAGACCCCATCAACGTGGAAAACCTACT...TCTGAAAGTGAAGAGGCCCCGGTTTGATGTGTCACTGGTATACTTAACTCGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220794.2 ENSMUST00000221541.2 ENSMUST00000221934.2 |
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| CDS-3UTR CAA 90 bp | CACTCGGGATACTCCAAAAACCTTCGTCACTCTGCACTGCTACTAGCCGCTCACGCTCCTATTCCATCATaGGTTTTACCATTTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: HSGYSKNLRHSALLLAAHAPIPS*VLPFEW Trigger: CCATTCAAATGGTAAAACCAATGATGGAATAGGAGC...GTGAGCGGCTAGTAGCAGTGCAGAGTGACGAAGGTTTTTGGAGTATCCCGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS-3UTR CAA 90 bp | TGTTATTTCAAGCTGCTTCAAATCTTTTGTAAAGCAGGAGAGGTTTACCAAACTTCCGAACACCCAGTTTaGTGGCAACTTTGTTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CYFKLLQIFCKAGEVYQTSEHPV*WQLCLS Trigger: ACTTAAACAAAGTTGCCACAAAACTGGGTGTTCGGA...AGTTTGGTAAACCTCTCCTGCTTTACAAAAGATTTGAAGCAGCTTGAAATAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020908.9 |
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| CDS GCA 72 bp | TTGATGGGGTCTCGGCAACGCCGGCGCACCGTTTCCTaGGCCGGGTCCACCAGCAGGCTGGGCTGTCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LMGSRQRRRTVS*AGSTSRLGCLR Trigger: GCGGAGACAGCCCAGCCTGCTGGTGGACCCGGCGCAGGAAACGGTGCGCCGGCGTTGCCGAGACCCCATCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020908.9 ENSMUST00000220794.2 ENSMUST00000221541.2 ENSMUST00000221934.2 |
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| CDS CAA 90 bp | AGAACTGGGCCACCACACCTGGCTAGAAGCAGTAGGTTTTCCACGTaGATGGGGTCTCGGCAACGCCGGCGCACCGTTTCCTGCGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTGPPHLARSSRFST*MGSRQRRRTVSCAG Trigger: CCCGGCGCAGGAAACGGTGCGCCGGCGTTGCCGAGACCCCATCAACGTGGAAAACCTACTGCTTCTAGCCAGGTGTGGTGGCCCAGTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221541.2 |
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| CDS CAA 72 bp | CCACCACACCTGGCTAGAAGCAGTAGGTTTTCCACGTaGATGGGGTCTCGGCAACGCCGGCGCACCGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPHLARSSRFST*MGSRQRRRTVS Trigger: GGAAACGGTGCGCCGGCGTTGCCGAGACCCCATCAACGTGGAAAACCTACTGCTTCTAGCCAGGTGTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221541.2 |
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| CDS TCA 72 bp | CTGGATGACACCCACGTGTCAGTAGGTTTTCCACGTTaGTGGGGTCTCGGCAACGCCGGCGCACCGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LDDTHVSVGFPR*WGLGNAGAPFP Trigger: AGGAAACGGTGCGCCGGCGTTGCCGAGACCCCATCAACGTGGAAAACCTACTGACACGTGGGTGTCATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220794.2 |
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| CDS TCA 72 bp | CACCACACCTGGCTAGAAGCAGTAGGTTTTCCACGTTaGTGGGGTCTCGGCAACGCCGGCGCACCGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HHTWLEAVGFPR*WGLGNAGAPFP Trigger: AGGAAACGGTGCGCCGGCGTTGCCGAGACCCCATCAACGTGGAAAACCTACTGCTTCTAGCCAGGTGTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221541.2 |
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