Pregenerated sensors for E2F5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027552Ensembl transcript IDs: ENSMUST00000029069.13, ENSMUST00000165922.3
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACATAAGACAAATAAGTGATCTTCTGGACAATGTTTTGTTTGGATaGACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: NIRQISDLLDNVLFG*TGACCNCPLRRGSY Trigger: GTAGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCAGAAGATCACTTATTTGTCTTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTCACTGGAGGGGCAGCTaGTGGACAGGTAATCATTAC | + |
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Preference number: 2 (lower is better) Translates to: FCLDELEPAVTALSGEEAHWRGS*WTGNHY Trigger: GTAATGATTACCTGTCCAGCAGCTGCCCCTCCAGTG...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTTGGAGGGGCAGCTGCTaGACAGGTAATCATTACCTC | + |
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Preference number: 2 (lower is better) Translates to: FCLDELEPAVTALSGEEAWRGSC*TGNHYL Trigger: GAGGTAATGATTACCTGTCCAGCAGCTGCCCCTCCA...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| 3UTR-3UTR GCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGACACTGGAGGGGCAGCTaGTGGACAGGTAATCATTAC | + |
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Preference number: 2 (lower is better) Translates to: WTMFCLDELEPAVTALSGHWRGS*WTGNHY Trigger: GTAATGATTACCTGTCCAGCAGCTGCCCCTCCAGTG...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| 3UTR-3UTR CCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGATGGAGGGGCAGCTGCTaGACAGGTAATCATTACCTC | + |
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Preference number: 2 (lower is better) Translates to: WTMFCLDELEPAVTALSGWRGSC*TGNHYL Trigger: GAGGTAATGATTACCTGTCCAGCAGCTGCCCCTCCA...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| 3UTR CCA 72 bp | GAGAGGAAGCTACTGAAAGAAACTGAATGTGGTCACTaGAGGGGCAGCTGCTGGACAGGTAATCATTACCTC | + |
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Preference number: 3 (lower is better) Translates to: ERKLLKETECGH*RGSCWTGNHYL Trigger: GAGGTAATGATTACCTGTCCAGCAGCTGCCCCTCCAGTGACCACATTCAGTTTCTTTCAGTAGCTTCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| 3UTR TCA 72 bp | CAAATAAGTGATCTTCTGGACAATGTTTTGTTTGGATaGACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QISDLLDNVLFG*TGACCNCPLRR Trigger: TCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCAGAAGATCACTTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGACCTGGGCCTGCGGCGTaGGCTGAGCAGAGCTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGPGPAA*AEQSSW Trigger: CCACGAGCTCTGCTCAGCCCACGCCGCAGGCCCAGG...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTGTACCAGAAGGTGCCTaGATGGCCAACAGTGTATCA | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEAVPEGA*MANSVS Trigger: TGATACACTGTTGGCCATTCAGGCACCTTCTGGTAC...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTCTGTGTACCAGAAGGTaGCTGAATGGCCAACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEALCTRR*LNGQQC Trigger: ACACTGTTGGCCATTCAGGCACCTTCTGGTACACAG...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTTGTGAGGTCATCAGGTaGGGGAACAGGAAAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEACEVIR*GNRKNH Trigger: GTGGTTTTTCCTGTTCCCCCACCTGATGACCTCACA...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAACTGAAGTTGAGGACTaGGAGGAAGGCTGTGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGTEVED*EEGCVR Trigger: CCTCACACAGCCTTCCTCCCAGTCCTCAACTTCAGT...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGCAGCTGGTGTCTGCTaGAAAGTCTGGCTTCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGAAGVC*KVWLLS Trigger: CGAAAGAAGCCAGACTTTCCAGCAGACACCAGCTGC...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGTACCAGAAGGTGCCTaGATGGCCAACAGTGTATCA | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGVPEGA*MANSVS Trigger: TGATACACTGTTGGCCATTCAGGCACCTTCTGGTAC...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGACTGTGTACCAGAAGGTaGCTGAATGGCCAACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGLCTRR*LNGQQC Trigger: ACACTGTTGGCCATTCAGGCACCTTCTGGTACACAG...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGATCTGCAGCTGGTGTCTaGTGGAAAGTCTGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGSAAGV*WKVWLL Trigger: AAGAAGCCAGACTTTCCAGCAGACACCAGCTGCAGA...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTCAGAAGGTGCCTGAATaGCCAACAGTGTATCACCAT | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEAQKVPE*PTVYHH Trigger: ATGGTGATACACTGTTGGCCATTCAGGCACCTTCTG...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGATGTGAGGTCATCAGGTaGGGGAACAGGAAAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGCEVIR*GNRKNH Trigger: GTGGTTTTTCCTGTTCCCCCACCTGATGACCTCACA...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTGGTTTTGAGCAGCCATaGTGGATTTCTGTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEAGFEQP*WISVES Trigger: TGACTCCACAGAAATCCACCATGGCTGCTCAAAACC...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGATGGATAGGCCCTGAGTaGCTCTTCAGATTTATCTGG | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGWIGPE*LFRFIW Trigger: CCAGATAAATCTGAAGAGTCACTCAGGGCCTATCCA...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTCACATGGATAGGCCCTaGGTGACTCTTCAGATTTAT | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEAHMDRP*VTLQIY Trigger: ATAAATCTGAAGAGTCACTCAGGGCCTATCCATGTG...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTTGTAGCCACAACTTCTaGTGGTCAAGTTCTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEACSHNF*WSSSLS Trigger: GGAAAGAGAACTTGACCAGCAGAAGTTGTGGCTACA...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGATTTGAGCAGCCATGGTaGATTTCTGTGGAGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGFEQPW*ISVESL Trigger: CAGTGACTCCACAGAAATCCACCATGGCTGCTCAAA...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGTCTGCTGGAAAGTCTaGCTTCTTTCGGAAACATGC | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGVCWKV*LLSETC Trigger: GCATGTTTCCGAAAGAAGCCAGACTTTCCAGCAGAC...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTCTTCCATCACATTTTTaGTGCTTTGCTGTAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEALPSHF*CFAVAT Trigger: TGTGGCTACAGCAAAGCATCAAAAATGTGATGGAAG...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGACACATGGATAGGCCCTaGGTGACTCTTCAGATTTAT | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGHMDRP*VTLQIY Trigger: ATAAATCTGAAGAGTCACTCAGGGCCTATCCATGTG...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGATGTAGCCACAACTTCTaGTGGTCAAGTTCTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGCSHNF*WSSSLS Trigger: GGAAAGAGAACTTGACCAGCAGAAGTTGTGGCTACA...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGACTTCCATCACATTTTTaGTGCTTTGCTGTAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGLPSHF*CFAVAT Trigger: TGTGGCTACAGCAAAGCATCAAAAATGTGATGGAAG...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTACATTTTTGATGCTTTaGTGTAGCCACAACTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEATFLML*CSHNFC Trigger: GCAGAAGTTGTGGCTACAGCAAAGCATCAAAAATGT...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTCACCATGAAAGCAATTaGAGATGTCTTCGTGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEAHHESN*RCLREL Trigger: TAACTCACGAAGACATCTGCAATTGCTTTCATGGTG...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTAACCACTGGCTTAGATaGACTGGACTCTTTATTTAT | + |
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Preference number: 4 (lower is better) Translates to: FCLDELEPAVTALSGEEANHWLR*TGLFIY Trigger: ATAAATAAAGAGTCCAGTTCATCTAAGCCAGTGGTT...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR GCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAACATTTTTGATGCTTTaGTGTAGCCACAACTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGTFLML*CSHNFC Trigger: GCAGAAGTTGTGGCTACAGCAAAGCATCAAAAATGT...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR TCA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAAACCACTGGCTTAGATaGACTGGACTCTTTATTTAT | + |
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Preference number: 4 (lower is better) Translates to: WTMFCLDELEPAVTALSGNHWLR*TGLFIY Trigger: ATAAATAAAGAGTCCAGTTCATCTAAGCCAGTGGTT...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CAA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTCTGCTCAGGCAGGTTTaGAGCAGCCATGGTGGATTT | + |
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Preference number: 5 (lower is better) Translates to: FCLDELEPAVTALSGEEALLRQV*SSHGGF Trigger: AAATCCACCATGGCTGCTCAAAACCTGCCTGAGCAG...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS CCA 90 bp | TCTCCACTAATAGATCCTGAAGATACTTCTGCAGCTGGTGTCTGCTaGAAAGTCTGGCTTCTTTCGGAAACATGCTGCTCAGGCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SPLIDPEDTSAAGVC*KVWLLSETCCSGRF Trigger: AAACCTGCCTGAGCAGCATGTTTCCGAAAGAAGCCAGACTTTCCAGCAGACACCAGCTGCAGAAGTATCTTCAGGATCTATTAGTGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS GCA 90 bp | CTGTCCCATTTCTGGAATAGGTACTTCCAGCTGTGTACCAGAAGGTaGCTGAATGGCCAACAGTGTATCACCATGAAAGCAATTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LSHFWNRYFQLCTRR*LNGQQCITMKAIAD Trigger: ATCTGCAATTGCTTTCATGGTGATACACTGTTGGCCATTCAGGCACCTTCTGGTACACAGCTGGAAGTACCTATTCCAGAAATGGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CAA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTATAAATTCTTCGCTTTaGCCTCACAGCCAAGGTATC | + |
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Preference number: 5 (lower is better) Translates to: FCLDELEPAVTALSGEEAINSSL*PHSQGI Trigger: GATACCTTGGCTGTGAGGCAAAAGCGAAGAATTTAT...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CAA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTTCTTCCATCACATTTTaGATGCTTTGCTGTAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: FCLDELEPAVTALSGEEASSITF*MLCCSH Trigger: GTGGCTACAGCAAAGCATCAAAAATGTGATGGAAGA...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CAA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAATAAATTCTTCGCTTTaGCCTCACAGCCAAGGTATC | + |
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Preference number: 5 (lower is better) Translates to: WTMFCLDELEPAVTALSGINSSL*PHSQGI Trigger: GATACCTTGGCTGTGAGGCAAAAGCGAAGAATTTAT...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CAA 90 bp | TTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGAGAGGAAGCTTATCTGGTATTTCTTTaGTCCATTCTGTCCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: FCLDELEPAVTALSGEEAYLVFL*SILSHF Trigger: GAAATGGGACAGAATGGACAAAAGAAATACCAGATA...AGCTTCCTCTCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS TCA 90 bp | ATCAGAAGACATCAGTTCATCAATGATGTCTCCACTAATAGATCCTaGAGATACTTCTGCAGCTGGTGTCTGCTGGAAAGTCTGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: IRRHQFINDVSTNRS*RYFCSWCLLESLAS Trigger: AGAAGCCAGACTTTCCAGCAGACACCAGCTGCAGAAGTATCTTCAGGATCTATTAGTGGAGACATCATTGATGAACTGATGTCTTCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS-3UTR CAA 90 bp | TGGACAATGTTTTGTTTGGATGAACTGGAGCCTGCTGTAACTGCCCTCTCAGGATATCTGGTATTTCTTTaGTCCATTCTGTCCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: WTMFCLDELEPAVTALSGYLVFL*SILSHF Trigger: GAAATGGGACAGAATGGACAAAAGAAATACCAGATA...TCCTGAGAGGGCAGTTACAGCAGGCTCCAGTTCATCCAAACAAAACATTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS GCA 72 bp | GCCGCTTTGAGATCCAGGACGCCGTCCTGCGCCTCCTaGAGCAACGACACGAATTTGGTGGTAAGCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: AALRSRTPSCAS*SNDTNLVVSKP Trigger: GGGCTTGCTTACCACCAAATTCGTGTCGTTGCTGCAGGAGGCGCAGGACGGCGTCCTGGATCTCAAAGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS CCA 72 bp | GAAGATACTTCTGCAGCTGGTGTCTGCTGGAAAGTCTaGCTTCTTTCGGAAACATGCTGCTCAGGCAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: EDTSAAGVCWKV*LLSETCCSGRF Trigger: AAACCTGCCTGAGCAGCATGTTTCCGAAAGAAGCCAGACTTTCCAGCAGACACCAGCTGCAGAAGTATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS GCA 72 bp | TTCTGGAATAGGTACTTCCAGCTGTGTACCAGAAGGTaGCTGAATGGCCAACAGTGTATCACCATGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: FWNRYFQLCTRR*LNGQQCITMKA Trigger: TGCTTTCATGGTGATACACTGTTGGCCATTCAGGCACCTTCTGGTACACAGCTGGAAGTACCTATTCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS TCA 72 bp | CATCAGTTCATCAATGATGTCTCCACTAATAGATCCTaGAGATACTTCTGCAGCTGGTGTCTGCTGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: HQFINDVSTNRS*RYFCSWCLLES Trigger: ACTTTCCAGCAGACACCAGCTGCAGAAGTATCTTCAGGATCTATTAGTGGAGACATCATTGATGAACTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029069.13 ENSMUST00000165922.3 |
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| CDS GCA 72 bp | CCTGAATGGCCAACAGTGTATCACCATGAAAGCAATTaGAGATGTCTTCGTGAGTTACATAAGAAAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: PEWPTVYHHESN*RCLRELHKKIC Trigger: ACAGATTTTCTTATGTAACTCACGAAGACATCTGCAATTGCTTTCATGGTGATACACTGTTGGCCATTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029069.13 |
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| CDS GCA 72 bp | CCTGAATGGCCAACAGTGTATCACCATGAAAGCAATTaGAGATGTCTTCGTGAGTTACATAAGAAAATGTAC | + |
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Preference number: 6 (lower is better) Translates to: PEWPTVYHHESN*RCLRELHKKMY Trigger: GTACATTTTCTTATGTAACTCACGAAGACATCTGCAATTGCTTTCATGGTGATACACTGTTGGCCATTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165922.3 |
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