Pregenerated sensors for E2F4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014859Ensembl transcript IDs: ENSMUST00000015003.10
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGGAAAGGTGATGGTAGGCAACCACCCAGCACCACCCTCTCTCTaGACCTCCTTCATAGTGACTGGTAGGAACAAGGCAGAGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: KGKVMVGNHPAPPSL*TSFIVTGRNKAEVP Trigger: TGGCACCTCTGCCTTGTTCCTACCAGTCACTATGAAGGAGGTTCAGAGAGAGGGTGGTGCTGGGTGGTTGCCTACCATCACCTTTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGGGAAAGGAAAGGTGATGGTAGGCAACCACCCAGCACCACCCTCTCTCCAGGCCCAGACAGTCTaGGTTGCAGCTGCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: AGGKGKVMVGNHPAPPSLQAQTV*VAAAQD Trigger: GTCCTGTGCAGCTGCAACCCAGACTGTCTGGGCCTG...GAGAGAGGGTGGTGCTGGGTGGTTGCCTACCATCACCTTTCCTTTCCCACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGGGAAAGGAAAGGTGATGGTAGGCAACCACCCAGCACCACCCTCTCTCGCAGCTGAGCCTGGCTaGGGAAGGCTCCATGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: AGGKGKVMVGNHPAPPSLAAEPG*GRLHVE Trigger: CTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC...GAGAGAGGGTGGTGCTGGGTGGTTGCCTACCATCACCTTTCCTTTCCCACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGGCACCACCCTCTCTCTaGACCTCCTTCATAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQAPPSL*TSFIVT Trigger: AGTCACTATGAAGGAGGTTCAGAGAGAGGGTGGTGC...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| 3UTR GCA 72 bp | CAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTaGAGGGTGAGCAGGTGGGAAAGGAAAGGTGATGGT | + |
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Preference number: 3 (lower is better) Translates to: QDSQGASEMSRG*RVSRWERKGDG Trigger: ACCATCACCTTTCCTTTCCCACCTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| 3UTR TCA 72 bp | GTGATGGTAGGCAACCACCCAGCACCACCCTCTCTCTaGACCTCCTTCATAGTGACTGGTAGGAACAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VMVGNHPAPPSL*TSFIVTGRNKA Trigger: TGCCTTGTTCCTACCAGTCACTATGAAGGAGGTTCAGAGAGAGGGTGGTGCTGGGTGGTTGCCTACCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| 3UTR GCA 72 bp | ACACAGCAATTCCTTATTAACCCCCTCCACCATGACTaGCCAGAGATCCCAGGACTCTCAGGGAGCATCCGA | + |
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Preference number: 3 (lower is better) Translates to: TQQFLINPLHHD*PEIPGLSGSIR Trigger: TCGGATGCTCCCTGAGAGTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CCA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGCTTCTCGTGCCGGCTTaGAGTCCCCGGGGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQLLVPA*SPRGRR Trigger: CCGCCGCCCCCGGGGACTCCAAGCCGGCACGAGAAG...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | GCAGCTGAGCCTGGCTGGGGAAGGCTCCATGTAGAGAGGGCTAAGCTCTCTGCCAGGCCGAGTGTCCAGTaGTGTCAGGCCCAGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AAEPGWGRLHVERAKLSARPSVQ*CQAQWE Trigger: CTCCCACTGGGCCTGACAGCACTGGACACTCGGCCT...GGCAGAGAGCTTAGCCCTCTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CCA 90 bp | GCAGTCCCTAGTTGGCTCCAGGCCCAGACAGTCTGGGTTGCAGCTGCACAGGACCCGATGGCGCCCGGATaGCAAGGAGGGTATCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: AVPSWLQAQTVWVAAAQDPMAPG*QGGYLQ Trigger: CTGGAGATACCCTCCTTGCCATCCGGGCGCCATCGG...GTCCTGTGCAGCTGCAACCCAGACTGTCTGGGCCTGGAGCCAACTAGGGACTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CCA 90 bp | GCAGCTGAGCCTGGCTGGGGAAGGCTCCATGTAGAGAGGGCTAAGCTCTCTGCCGTGGTCTCCGGGAGGTaGAGAAAGTCGGAGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AAEPGWGRLHVERAKLSAVVSGR*RKSEEG Trigger: CCCCTCCTCCGACTTTCTCCACCTCCCGGAGACCAC...GGCAGAGAGCTTAGCCCTCTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | CTCCACCATGACTGCCCAGAGATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCCCAGACTCTTCTCGTaGCGGCTTGGAGTCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LHHDCPEIPGLSGSIRDVPRLFS*RLGVPG Trigger: CCCGGGGACTCCAAGCCGGCACGAGAAGAGTCTGGG...GACATCTCGGATGCTCCCTGAGAGTCCTGGGATCTCTGGGCAGTCATGGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | GCAGTCCCTAGTTGGCTCCAGGCCCAGACAGTCTGGGTTGCAGCTGCACAGGACGCCACCTCTGAGACTTaGGTGCTGCCAAGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: AVPSWLQAQTVWVAAAQDATSET*VLPRTG Trigger: TCCTGTCCTTGGCAGCACTCAAGTCTCAGAGGTGGC...GTCCTGTGCAGCTGCAACCCAGACTGTCTGGGCCTGGAGCCAACTAGGGACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | GCAGCTGAGCCTGGCTGGGGAAGGCTCCATGTAGAGAGGGCTAAGCTCTCTGCCCTTCCAGCACGTTGGTaGTGTCGTAGATCCGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: AAEPGWGRLHVERAKLSALPARW*CRRSAV Trigger: AACGGCGGATCTACGACATCACCAACGTGCTGGAAG...GGCAGAGAGCTTAGCCCTCTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | GCAGCTGAGCCTGGCTGGGGAAGGCTCCATGTAGAGAGGGCTAAGCTCTCTGCCTCTGGACGTCCTCAGTaGCATTCCGGATGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AAEPGWGRLHVERAKLSASGRPQ*HSGCSA Trigger: AGCAGAGCATCCGGAATGTCACTGAGGACGTCCAGA...GGCAGAGAGCTTAGCCCTCTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | GCAGTCCCTAGTTGGCTCCAGGCCCAGACAGTCTGGGTTGCAGCTGCACAGGACTGCTGGTCCAGTTCTTaGTCTCGTTGCTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AVPSWLQAQTVWVAAAQDCWSSS*SRCCSS Trigger: GGAGCTGCAGCAACGAGAGCAAGAACTGGACCAGCA...GTCCTGTGCAGCTGCAACCCAGACTGTCTGGGCCTGGAGCCAACTAGGGACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | GCAGTCCCTAGTTGGCTCCAGGCCCAGACAGTCTGGGTTGCAGCTGCACAGGACACATTCCGGATGCTCTaGTGCACCCACACCTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: AVPSWLQAQTVWVAAAQDTFRML*CTHTLC Trigger: GCACAAGGTGTGGGTGCAGCAGAGCATCCGGAATGT...GTCCTGTGCAGCTGCAACCCAGACTGTCTGGGCCTGGAGCCAACTAGGGACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | GCAGCTGAGCCTGGCTGGGGAAGGCTCCATGTAGAGAGGGCTAAGCTCTCTGCCTGGGTCCAGATGAACTaGTGCTGCTGCTACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AAEPGWGRLHVERAKLSAWVQMN*CCCYCC Trigger: GCAGCAGTAGCAGCAGCAGCAGTTCATCTGGACCCA...GGCAGAGAGCTTAGCCCTCTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGACTTCTTCTGGCCATTaGGACCCTCTGGGATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQTSSGH*DPLGWA Trigger: TGCCCATCCCAGAGGGTCTCAATGGCCAGAAGAAGT...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGACTACTATCCAGCAGTaGAGAGGACTGCAGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQTTIQQ*RGLQRP Trigger: CGGCCTCTGCAGTCCTCTGCACTGCTGGATAGTAGT...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | CTCCACCATGACTGCCCAGAGATCCCAGGACTCTCAGGGAGCATCCGAGATGTCAGCAAGAGTGTCGGCTaGCAGCTTGAGGTCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LHHDCPEIPGLSGSIRDVSKSVG*QLEVKH Trigger: GTGCTTGACCTCAAGCTGGCAGCCGACACTCTTGCT...GACATCTCGGATGCTCCCTGAGAGTCCTGGGATCTCTGGGCAGTCATGGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | GCACAGCCCGAACTGAGCGACCAGAAAAGGCTGAGTAAGCCAAGAGTTGGGCTCAGGGTTGGGTCCAGATaGACTGCTGCTGCTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: AQPELSDQKRLSKPRVGLRVGSR*TAAAAT Trigger: AGTAGCAGCAGCAGCAGTTCATCTGGACCCAACCCT...GAGCCCAACTCTTGGCTTACTCAGCCTTTTCTGGTCGCTCAGTTCGGGCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | GCAGGTGGGAAAGGAAAGGTGATGGTAGGCAACCACCCAGCACCACCCTCTCTCGGGGTCGAAGATTTCTaGCAGCTCTTTGGGGAGATC | + |
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Preference number: 4 (lower is better) Translates to: AGGKGKVMVGNHPAPPSLGVEDF*QLFGEI Trigger: GATCTCCCCAAAGAGCTGTCAGAAATCTTCGACCCC...GAGAGAGGGTGGTGCTGGGTGGTTGCCTACCATCACCTTTCCTTTCCCACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGAGTTCTTGCTCTCGTTaGTGCAGCTCCTCGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQSSCSR*CSSSIS Trigger: AGAGATCGAGGAGCTGCAGCAACGAGAGCAAGAACT...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | GCAGGTGGGAAAGGAAAGGTGATGGTAGGCAACCACCCAGCACCACCCTCTCTCAACGCCTGTGGGGTCTaGTTTGATGGGCTCAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: AGGKGKVMVGNHPAPPSLNACGV*FDGLKG Trigger: TCCTTTGAGCCCATCAAAGCAGACCCCACAGGCGTT...GAGAGAGGGTGGTGCTGGGTGGTTGCCTACCATCACCTTTCCTTTCCCACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CCA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGTTTCTGACAGCTCTTTaGGGAGATCCAGAACGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQFLTAL*GDPERL Trigger: CAGGCGTTCTGGATCTCCCCAAAGAGCTGTCAGAAA...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | CAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACTCCTGGCATGCCACCTCTaGGACTTGAGTGCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: QQFLINPLHHDCPEIPGLLACHL*DLSAAK Trigger: CTTGGCAGCACTCAAGTCTCAGAGGTGGCATGCCAG...GAGTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | GTGCAAGACAGGAGAGCACAGCCCGAACTGAGCGACCAGAAAAGGCTGAGTAAGTCTTGCTCTCGTTGCTaGAGCTCCTCGATCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VQDRRAQPELSDQKRLSKSCSRC*SSSISA Trigger: GGCAGAGATCGAGGAGCTGCAGCAACGAGAGCAAGA...CTTACTCAGCCTTTTCTGGTCGCTCAGTTCGGGCTGTGCTCTCCTGTCTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | CACAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACAGCAGTGCAGAGGACTaGAGAGGCCGAGTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HSNSLLTPSTMTAQRSQDSSAED*RGRVSS Trigger: ACTGGACACTCGGCCTCTGCAGTCCTCTGCACTGCT...GTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | CACAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACGTCCAGATGAACTGCTaGTGCTGCTACTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HSNSLLTPSTMTAQRSQDVQMNC*CCYCCC Trigger: GCAGCAGCAGTAGCAGCAGCAGCAGTTCATCTGGAC...GTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CCA 90 bp | GCACAGCCCGAACTGAGCGACCAGAAAAGGCTGAGTAAGCCAAGAGTTGGGCTCATCTGGTACTTCTTCTaGCCATTGAGACCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AQPELSDQKRLSKPRVGLIWYFF*PLRPSG Trigger: CCCAGAGGGTCTCAATGGCCAGAAGAAGTACCAGAT...GAGCCCAACTCTTGGCTTACTCAGCCTTTTCTGGTCGCTCAGTTCGGGCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | CACAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACGGGGGCAAACACTTCTaGAGACATCAGTTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HSNSLLTPSTMTAQRSQDGGKHF*RHQFFQ Trigger: CTGGAAGAACTGATGTCTTCAGAAGTGTTTGCCCCC...GTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CCA 90 bp | CAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACTCGCAATCTCAGATGTCTaGCATGCCACCTCTGAGACT | + |
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Preference number: 4 (lower is better) Translates to: QQFLINPLHHDCPEIPGLAISDV*HATSET Trigger: AGTCTCAGAGGTGGCATGCCAGACATCTGAGATTGC...GAGTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR GCA 90 bp | CACAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACCGCCCTTCCACTGGATaGTGTTCTTGGATTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HSNSLLTPSTMTAQRSQDRPSTG*CSWISS Trigger: AGAAGAAATCCAAGAACAGCATCCAGTGGAAGGGCG...GTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR TCA 90 bp | CAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACTCCTCATGCTCTTTAAGTaGATCTGGTACTTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QQFLINPLHHDCPEIPGLLMLFK*IWYFFW Trigger: CCAGAAGAAGTACCAGATTCACTTAAAGAGCATGAG...GAGTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GCAGTCCCTAGTTGGCTCCAGGCCCAGACAGTCTGGGTTGCAGCTGCACAGGACTCTTCTCGTGCCGGCTaGGAGTCCCCGGGGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: AVPSWLQAQTVWVAAAQDSSRAG*ESPGAA Trigger: CGCCGCCCCCGGGGACTCCAAGCCGGCACGAGAAGA...GTCCTGTGCAGCTGCAACCCAGACTGTCTGGGCCTGGAGCCAACTAGGGACTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GCAGCTGAGCCTGGCTGGGGAAGGCTCCATGTAGAGAGGGCTAAGCTCTCTGCCGCGATCTCCCGGGTATaGCAACCTGGCCCGACGCCC | + |
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Preference number: 5 (lower is better) Translates to: AAEPGWGRLHVERAKLSAAISRV*QPGPTP Trigger: GGGCGTCGGGCCAGGTTGCAATACCCGGGAGATCGC...GGCAGAGAGCTTAGCCCTCTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GCAGTCCCTAGTTGGCTCCAGGCCCAGACAGTCTGGGTTGCAGCTGCACAGGACTCAAGCACGCCGTCCTaGGCTTCCTGCAAGAGCGAC | + |
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Preference number: 5 (lower is better) Translates to: AVPSWLQAQTVWVAAAQDSSTPS*ASCKSD Trigger: GTCGCTCTTGCAGGAAGCCAAGGACGGCGTGCTTGA...GTCCTGTGCAGCTGCAACCCAGACTGTCTGGGCCTGGAGCCAACTAGGGACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGCAGTTCTTGCTCTCGTaGCTGCAGCTCCTCGATCTC | + |
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Preference number: 5 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQQFLLS*LQLLDL Trigger: GAGATCGAGGAGCTGCAGCAACGAGAGCAAGAACTG...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS TCA 90 bp | CCACTCACTGCAATCTCAGATGTCTGGCATGCCACCTCTGAGACTTaGGTGCTGCCAAGGACAGGAGTGGGGGTAGTTAGCTGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLTAISDVWHATSET*VLPRTGVGVVSWGL Trigger: CAGCCCCCAGCTAACTACCCCCACTCCTGTCCTTGGCAGCACTCAAGTCTCAGAGGTGGCATGCCAGACATCTGAGATTGCAGTGAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | ATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCAGAGGCTGCAGGGTGAGCAGAAGAGCGACACGAACTaGGTGGTGAGAAGTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: IPGLSGSIRDVQRLQGEQKSDTN*VVRSPR Trigger: TCTGGGACTTCTCACCACCAAGTTCGTGTCGCTCTT...CTGCTCACCCTGCAGCCTCTGGACATCTCGGATGCTCCCTGAGAGTCCTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GCACAGCCCGAACTGAGCGACCAGAAAAGGCTGAGTAAGCCAAGAGTTGGGCTCGTGCTGGTCCAGTTCTaGCTCTCGTTGCTGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: AQPELSDQKRLSKPRVGLVLVQF*LSLLQL Trigger: GAGCTGCAGCAACGAGAGCAAGAACTGGACCAGCAC...GAGCCCAACTCTTGGCTTACTCAGCCTTTTCTGGTCGCTCAGTTCGGGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GCACAGCCCGAACTGAGCGACCAGAAAAGGCTGAGTAAGCCAAGAGTTGGGCTCTGCTGCACCCACACCTaGTGCTGGTCCAGTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: AQPELSDQKRLSKPRVGLCCTHT*CWSSSC Trigger: GCAAGAACTGGACCAGCACAAGGTGTGGGTGCAGCA...GAGCCCAACTCTTGGCTTACTCAGCCTTTTCTGGTCGCTCAGTTCGGGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GCAGCTGAGCCTGGCTGGGGAAGGCTCCATGTAGAGAGGGCTAAGCTCTCTGCCACTTCACCACTGTCCTaGTTCTCAGTTCCAGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: AAEPGWGRLHVERAKLSATSPLS*FSVPGL Trigger: TAGCCCTGGAACTGAGAACAAGGACAGTGGTGAAGT...GGCAGAGAGCTTAGCCCTCTCTACATGGAGCCTTCCCCAGCCAGGCTCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GTGCAAGACAGGAGAGCACAGCCCGAACTGAGCGACCAGAAAAGGCTGAGTAAGGAACTCCAGGCCTCCTaGTTCACTAGCAGCACCTCG | + |
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Preference number: 5 (lower is better) Translates to: VQDRRAQPELSDQKRLSKELQAS*FTSSTS Trigger: CGAGGTGCTGCTAGTGAACAAGGAGGCCTGGAGTTC...CTTACTCAGCCTTTTCTGGTCGCTCAGTTCGGGCTGTGCTCTCCTGTCTTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS TCA 90 bp | GTCTGCTTTGATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCAGATaGACTGCTGCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTACT | + |
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Preference number: 5 (lower is better) Translates to: VCFDGLKGGRRVGSR*TAAAATAAAAAAAT Trigger: AGTAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGTTCATCTGGACCCAACCCTTCTACCTCCTTTGAGCCCATCAAAGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | CAGCAATTCCTTATTAACCCCCTCCACCATGACTGCCCAGAGATCCCAGGACTCCCTGTGGGGTCTGCTTaGATGGGCTCAAAGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: QQFLINPLHHDCPEIPGLPVGSA*MGSKEV Trigger: TACCTCCTTTGAGCCCATCAAAGCAGACCCCACAGG...GAGTCCTGGGATCTCTGGGCAGTCATGGTGGAGGGGGTTAATAAGGAATTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | CTCCACCATGACTGCCCAGAGATCCCAGGACTCTCAGGGAGCATCCGAGATGTCCACTGGATGCTGTTCTaGGATTTCTTCTCGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: LHHDCPEIPGLSGSIRDVHWMLF*DFFSIR Trigger: TCTGATCGAGAAGAAATCCAAGAACAGCATCCAGTG...GACATCTCGGATGCTCCCTGAGAGTCCTGGGATCTCTGGGCAGTCATGGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS-3UTR CAA 90 bp | GTGCAAGACAGGAGAGCACAGCCCGAACTGAGCGACCAGAAAAGGCTGAGTAAGATTTCTGACAGCTCTTaGGGGAGATCCAGAACGCCT | + |
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Preference number: 5 (lower is better) Translates to: VQDRRAQPELSDQKRLSKISDSS*GRSRTP Trigger: AGGCGTTCTGGATCTCCCCAAAGAGCTGTCAGAAAT...CTTACTCAGCCTTTTCTGGTCGCTCAGTTCGGGCTGTGCTCTCCTGTCTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS CCA 72 bp | TGGGCACCTCTAGACTGGTGCCCGATGGCGCCCGGATaGCAAGGAGGGTATCTCCAGCAAAGCATCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WAPLDWCPMAPG*QGGYLQQSICR Trigger: TCTGCAGATGCTTTGCTGGAGATACCCTCCTTGCCATCCGGGCGCCATCGGGCACCAGTCTAGAGGTGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS TCA 72 bp | AGCTGGGGGCTGCTTGGAGGAGAGGATTCTTGGGGTTaGGCTAAGGCAGGCTTGGGCAGAGGTGGAGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SWGLLGGEDSWG*AKAGLGRGGGV Trigger: TACACCTCCACCTCTGCCCAAGCCTGCCTTAGCTCAACCCCAAGAATCCTCTCCTCCAAGCAGCCCCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS CAA 90 bp | TGGACGTCCTCAGTGACATTCCGGATGCTCTGCTGCACCCACACCTaGTGCTGGTCCAGTTCTTGCTCTCGTTGCTGCAGCTCCTCGATC | + |
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Preference number: 6 (lower is better) Translates to: WTSSVTFRMLCCTHT*CWSSSCSRCCSSSI Trigger: GATCGAGGAGCTGCAGCAACGAGAGCAAGAACTGGACCAGCACAAGGTGTGGGTGCAGCAGAGCATCCGGAATGTCACTGAGGACGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS CAA 72 bp | TTGAGCTCAATCAGCTTGTCAGCGATCTCCCGGGTATaGCAACCTGGCCCGACGCCCTTCCACTGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSISLSAISRV*QPGPTPFHWML Trigger: CAGCATCCAGTGGAAGGGCGTCGGGCCAGGTTGCAATACCCGGGAGATCGCTGACAAGCTGATTGAGCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS TCA 72 bp | GATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCAGATaGACTGCTGCTGCTGCTACTGCTGCTGCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: DGLKGGRRVGSR*TAAAATAAAAA Trigger: AGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGTTCATCTGGACCCAACCCTTCTACCTCCTTTGAGCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS TCA 72 bp | GGAGCTCATGCACTCTCTCGTGGGGTCGAAGATTTCTaGCAGCTCTTTGGGGAGATCCAGAACGCCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GAHALSRGVEDF*QLFGEIQNACG Trigger: CCCACAGGCGTTCTGGATCTCCCCAAAGAGCTGTCAGAAATCTTCGACCCCACGAGAGAGTGCATGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS GCA 72 bp | AACTGCTGCTGCTGCTACTGCTGCTGCTGCTGCTGCTaGTACTACTATCCAGCAGTGCAGAGGACTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: NCCCCYCCCCCC*YYYPAVQRTAE Trigger: CTCTGCAGTCCTCTGCACTGCTGGATAGTAGTAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS GCA 72 bp | CAGCTCTTTGGGGAGATCCAGAACGCCTGTGGGGTCTaGTTTGATGGGCTCAAAGGAGGTAGAAGGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: QLFGEIQNACGV*FDGLKGGRRVG Trigger: CCCAACCCTTCTACCTCCTTTGAGCCCATCAAAGCAGACCCCACAGGCGTTCTGGATCTCCCCAAAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS CAA 72 bp | TCAGTGACATTCCGGATGCTCTGCTGCACCCACACCTaGTGCTGGTCCAGTTCTTGCTCTCGTTGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SVTFRMLCCTHT*CWSSSCSRCCS Trigger: GCTGCAGCAACGAGAGCAAGAACTGGACCAGCACAAGGTGTGGGTGCAGCAGAGCATCCGGAATGTCACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS TCA 72 bp | GCAATCTCAGATGTCTGGCATGCCACCTCTGAGACTTaGGTGCTGCCAAGGACAGGAGTGGGGGTAGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: AISDVWHATSET*VLPRTGVGVVS Trigger: GCTAACTACCCCCACTCCTGTCCTTGGCAGCACTCAAGTCTCAGAGGTGGCATGCCAGACATCTGAGATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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| CDS CAA 72 bp | TCTTTGGGGAGATCCAGAACGCCTGTGGGGTCTGCTTaGATGGGCTCAAAGGAGGTAGAAGGGTTGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLGRSRTPVGSA*MGSKEVEGLGP Trigger: TGGACCCAACCCTTCTACCTCCTTTGAGCCCATCAAAGCAGACCCCACAGGCGTTCTGGATCTCCCCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015003.10 |
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