Pregenerated sensors for E2F3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016477Ensembl transcript IDs: ENSMUST00000102948.11, ENSMUST00000221536.2, ENSMUST00000222730.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAGGGAGTCGCCCTGGCATTCTATCAGTGCATTTCCCGTCTCCTaGCCTCCCTTAGTCCAAACTCACCCACTCACAGTGGATTCGGAG | + |
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Preference number: 1 (lower is better) Translates to: TRESPWHSISAFPVS*PPLVQTHPLTVDSE Trigger: CTCCGAATCCACTGTGAGTGGGTGAGTTTGGACTAAGGGAGGTCAGGAGACGGGAAATGCACTGATAGAATGCCAGGGCGACTCCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR CCA 90 bp | TTAGTCCAAACTCACCCACTCACAGTGGATTCGGAGAATGGGTTCTaGCTAGAACTAGTCCAACCCCCAGACACAGTGGGAGCTCCTCGC | + |
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Preference number: 1 (lower is better) Translates to: LVQTHPLTVDSENGF*LELVQPPDTVGAPR Trigger: GCGAGGAGCTCCCACTGTGTCTGGGGGTTGGACTAGTTCTAGCCAGAACCCATTCTCCGAATCCACTGTGAGTGGGTGAGTTTGGACTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR GCA 90 bp | CCATTCCTGAGGAGTAACAAGGGAGTCGCCCTGGCATTCTATCAGTaGATTTCCCGTCTCCTGACCTCCCTTAGTCCAAACTCACCCACT | + |
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Preference number: 1 (lower is better) Translates to: PFLRSNKGVALAFYQ*ISRLLTSLSPNSPT Trigger: AGTGGGTGAGTTTGGACTAAGGGAGGTCAGGAGACGGGAAATGCACTGATAGAATGCCAGGGCGACTCCCTTGTTACTCCTCAGGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR GCA 90 bp | GTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTaGCAGTGGGAACGCTATTCTTGGAAGTTAACTGGAAGGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: VLCHIQHQDKMALAT*QWERYSWKLTGRVL Trigger: AAGGACCCTTCCAGTTAACTTCCAAGAATAGCGTTCCCACTGGCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR GCA 90 bp | ATTTGTGGCAGAATTCCATTCCGTGGTAGCAGACTCACAAAGACATaGATTCTGCAAGAGAAGGCACGGCTTGAACTGCTGTTAAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: ICGRIPFRGSRLTKT*ILQEKARLELLLRE Trigger: CTCCCTTAACAGCAGTTCAAGCCGTGCCTTCTCTTGCAGAATGCATGTCTTTGTGAGTCTGCTACCACGGAATGGAATTCTGCCACAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR CCA 90 bp | GAGCATGGATGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTaGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTTAT | + |
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Preference number: 1 (lower is better) Translates to: EHGCLTLCTPVKPLN*RKSYYALRERLKTY Trigger: ATAAGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACATCCATGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGGCTGTGGAGGCTCTTaGCGCCTCCTAGTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTGCGGS*RLLVGH Trigger: GTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGAGGGGATCCATGCCTaGTGCTCCACGGGACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTEGIHA*CSTGQL Trigger: CAGCTGTCCCGTGGAGCAGCAGGCATGGATCCCCTC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGCCGGGGCTGGAGGCTaGAGAGAGAGGAAGATAGTC | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTAGAGG*RERKIV Trigger: GACTATCTTCCTCTCTCTTCAGCCTCCAGCCCCGGC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGCAGAGGCTGGTTGGTaGACCTTAGGTCACACGGGG | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTAEAGW*TLGHTG Trigger: CCCCGTGTGACCTAAGGTCCACCAACCAGCCTCTGC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGGAGGGAAGGACAGGTaGGAGACACCTGATTGCACA | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTGGKDR*ETPDCT Trigger: TGTGCAATCAGGTGTCTCTCACCTGTCCTTCCCTCC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAAGAGAAGGCACGGCTTaGACTGCTGTTAAGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTREGTA*TAVKGG Trigger: CCCTCCCTTAACAGCAGTTCAAGCCGTGCCTTCTCT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACACTCATCAGGAAGATTTaGGAGCCTGGGACCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTLIRKI*EPGTRQ Trigger: CTGCCTGGTCCCAGGCTCCCAAATCTTCCTGATGAG...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACACATCCAAAAAGGCTGTaGAGGCTCTTGCCGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTHPKRL*RLLPPP Trigger: AGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATG...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACATCCAAGCTCCCCTCCTaGGAAAGGAGGCAAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTSKLPS*ERRQDR Trigger: TCTGTCTTGCCTCCTTTCCCAGGAGGGGAGCTTGGA...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAAACACCAGGACAAGATaGCCCTTGCCACCTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTNTRTR*PLPPAS Trigger: ACTGGCAGGTGGCAAGGGCCATCTTGTCCTGGTGTT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCGGCTGTGGAGGCTCTTaGCGCCTCCTAGTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCGCGGS*RLLVGH Trigger: GTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCC...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTACTCATCAGGAAGATTTaGGAGCCTGGGACCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLLIRKI*EPGTRQ Trigger: CTGCCTGGTCCCAGGCTCCCAAATCTTCCTGATGAG...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR CAA 90 bp | CCTGGGAAAGGAGGCAAGACAGAGGATGCTTCTCGCAGAGGCTGGTaGGTGGACCTTAGGTCACACGGGGTTAGATGCTTTTTATCAGTA | + |
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Preference number: 2 (lower is better) Translates to: PGKGGKTEDASRRGW*VDLRSHGVRCFLSV Trigger: TACTGATAAAAAGCATCTAACCCCGTGTGACCTAAGGTCCACCAACCAGCCTCTGCGAGAAGCATCCTCTGTCTTGCCTCCTTTCCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACACATCTTCTCACTTGCTaGCTCATCAGGAAGATTTGG | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTHLLTC*LIRKIW Trigger: CCAAATCTTCCTGATGAGTCAGCAAGTGAGAAGATG...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACATGGTACCAGGGAACCTaGATCTCAGGACTTAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTWYQGT*ISGLKV Trigger: TACTTTAAGTCCTGAGATGCAGGTTCCCTGGTACCA...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCTGGGGGCAGTGGAAGTaGGGTATGGAGACAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCWGQWK*GMETGK Trigger: TTTCCCTGTCTCCATACCCCACTTCCACTGCCCCCA...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCCACAAATACGCAGGATaGGGGCAGTGGAAGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCHKYAG*GQWKWG Trigger: ACCCCACTTCCACTGCCCCCATCCTGCGTATTTGTG...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAAGTGGATTCGGAGAATaGGTTCTGGCTAGAACTAGT | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTSGFGE*VLARTS Trigger: ACTAGTTCTAGCCAGAACCCATTCTCCGAATCCACT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAAGACTCACAAAGACATaGATTCTGCAAGAGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTRLTKT*ILQEKA Trigger: TGCCTTCTCTTGCAGAATGCATGTCTTTGTGAGTCT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACATCACACGGGGTTAGATaGTTTTTATCAGTAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTSHGVR*FLSVEV Trigger: CACCTCTACTGATAAAAAGCATCTAACCCCGTGTGA...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGGATTTGAGGTACTATaGCATATTCAACACCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTGFEVL*HIQHQD Trigger: GTCCTGGTGTTGAATATGGCATAGTACCTCAAATCC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACACTCATCTACTTTGTGTaGCAGATACTACGAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTLIYFV*QILRAK Trigger: CTTTGCTCGTAGTATCTGGCACACAAAGTAGATGAG...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTACATCTTCTCACTTGCTaGCTCATCAGGAAGATTTGG | + |
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Preference number: 2 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLHLLTC*LIRKIW Trigger: CCAAATCTTCCTGATGAGTCAGCAAGTGAGAAGATG...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACATGTCATTCCTTTGCATaGCTTCAAGCTTGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTCHSFA*LQACIC Trigger: ACAAATGCAAGCTTGAAGTCATGCAAAGGAATGACA...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGCCGGGGCTGGAGGCTaGAGAGAGAGGAAGATAGTC | + |
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Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYAGAGG*RERKIV Trigger: GACTATCTTCCTCTCTCTTCAGCCTCCAGCCCCGGC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTGGCTGTGGAGGCTCTTaGCGCCTCCTAGTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTGCGGS*RLLVGH Trigger: GTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCC...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGATGGAGGGGATCCATaGCTGCTGCTCCACGGGACA | + |
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Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYDGGDP*LLLHGT Trigger: TGTCCCGTGGAGCAGCAGGCATGGATCCCCTCCATC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGGACAAGATGGCCCTTaGCACCTGCCAGTGGGAACG | + |
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Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYGQDGP*HLPVGT Trigger: CGTTCCCACTGGCAGGTGGCAAGGGCCATCTTGTCC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGCAGAGGCTGGTTGGTaGACCTTAGGTCACACGGGG | + |
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Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYAEAGW*TLGHTG Trigger: CCCCGTGTGACCTAAGGTCCACCAACCAGCCTCTGC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCCTCACCCACTCACAGTaGATTCGGAGAATGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCLTHSQ*IRRMGS Trigger: AGAACCCATTCTCCGAATCCACTGTGAGTGGGTGAG...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTGCCGGGGCTGGAGGCTaGAGAGAGAGGAAGATAGTC | + |
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Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTAGAGG*RERKIV Trigger: GACTATCTTCCTCTCTCTTCAGCCTCCAGCCCCGGC...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTATCCGTGTCATTCCTTTaGATGACTTCAAGCTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLSVSFL*MTSSLH Trigger: ATGCAAGCTTGAAGTCATGCAAAGGAATGACACGGA...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCAGTGGAAGTGGGGTATaGAGACAGGGAAATCCACAA | + |
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Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCSGSGV*RQGNPQ Trigger: TTGTGGATTTCCCTGTCTCCATACCCCACTTCCACT...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGCAGGATGGGGGCAGTaGAAGTGGGGTATGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYAGWGQ*KWGMET Trigger: TGTCTCCATACCCCACTTCCACTGCCCCCATCCTGC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGGAGGGAAGGACAGGTaGGAGACACCTGATTGCACA | + |
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Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYGGKDR*ETPDCT Trigger: TGTGCAATCAGGTGTCTCTCACCTGTCCTTCCCTCC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATATGGCCCTTGCCACCTaGCAGTGGGAACGCTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYMALAT*QWERYS Trigger: AGAATAGCGTTCCCACTGGCAGGTGGCAAGGGCCAT...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGAGAAAGTCTTATTATaGATTGAGAGAACGCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTEKVLL*IERTLE Trigger: TTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATCATCCAAAAAGGCTGTaGAGGCTCTTGCCGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYHPKRL*RLLPPP Trigger: AGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATG...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTGCAGGATGGGGGCAGTaGAAGTGGGGTATGGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTAGWGQ*KWGMET Trigger: TGTCTCCATACCCCACTTCCACTGCCCCCATCCTGC...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCTGGGAACGCTATTCTTaGAAGTTAACTGGAAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCWERYS*KLTGRV Trigger: GACCCTTCCAGTTAACTTCCAAGAATAGCGTTCCCA...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATAACACCAGGACAAGATaGCCCTTGCCACCTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYNTRTR*PLPPAS Trigger: ACTGGCAGGTGGCAAGGGCCATCTTGTCCTGGTGTT...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCAGACTCACAAAGACATaGATTCTGCAAGAGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCRLTKT*ILQEKA Trigger: TGCCTTCTCTTGCAGAATGCATGTCTTTGTGAGTCT...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCTCACACGGGGTTAGATaGTTTTTATCAGTAGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCSHGVR*FLSVEV Trigger: CACCTCTACTGATAAAAAGCATCTAACCCCGTGTGA...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACGAGGGGATCCATGCCTaGTGCTCCACGGGACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHEGIHA*CSTGQL Trigger: CAGCTGTCCCGTGGAGCAGCAGGCATGGATCCCCTC...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTATGGCCCTTGCCACCTaGCAGTGGGAACGCTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTMALAT*QWERYS Trigger: AGAATAGCGTTCCCACTGGCAGGTGGCAAGGGCCAT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTTCCAAGCTCCCCTCCTaGGAAAGGAGGCAAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTSKLPS*ERRQDR Trigger: TCTGTCTTGCCTCCTTTCCCAGGAGGGGAGCTTGGA...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCTGTCATTCCTTTGCATaGCTTCAAGCTTGCATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: FEVLCHIQHQDKMALATCCHSFA*LQACIC Trigger: ACAAATGCAAGCTTGAAGTCATGCAAAGGAATGACA...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACGATGGAGGGGATCCATaGCTGCTGCTCCACGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHDGGDP*LLLHGT Trigger: TGTCCCGTGGAGCAGCAGGCATGGATCCCCTCCATC...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACGGACAAGATGGCCCTTaGCACCTGCCAGTGGGAACG | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHGQDGP*HLPVGT Trigger: CGTTCCCACTGGCAGGTGGCAAGGGCCATCTTGTCC...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATCATCTTCTCACTTGCTaGCTCATCAGGAAGATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYHLLTC*LIRKIW Trigger: CCAAATCTTCCTGATGAGTCAGCAAGTGAGAAGATG...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACAGAGAAGGCACGGCTTaGACTGCTGTTAAGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHREGTA*TAVKGG Trigger: CCCTCCCTTAACAGCAGTTCAAGCCGTGCCTTCTCT...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACCTCATCAGGAAGATTTaGGAGCCTGGGACCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHLIRKI*EPGTRQ Trigger: CTGCCTGGTCCCAGGCTCCCAAATCTTCCTGATGAG...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATTCAAGCTTGCATTTGTaGCAGAATTCCATTCCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYSSLHL*QNSIPW Trigger: CCACGGAATGGAATTCTGCCACAAATGCAAGCTTGA...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACCACAAATACGCAGGATaGGGGCAGTGGAAGTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHHKYAG*GQWKWG Trigger: ACCCCACTTCCACTGCCCCCATCCTGCGTATTTGTG...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATTTAGTCATTAGACTTTaGGGACAGAAACCCAGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYLVIRL*GQKPSS Trigger: CGAGCTGGGTTTCTGTCCCCAAAGTCTAATGACTAA...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGGATTTGAGGTACTATaGCATATTCAACACCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYGFEVL*HIQHQD Trigger: GTCCTGGTGTTGAATATGGCATAGTACCTCAAATCC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTACACAGAGTTTAAAGTaGCGGTGTCTTCTGTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTTQSLK*RCLLSP Trigger: TGGAGACAGAAGACACCGGCACTTTAAACTCTGTGT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTAGAAACCCAGCTCGATaGAGCTGGCAAAGAGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTRNPAR*SWQREL Trigger: TAATTCTCTTTGCCAGCTGCATCGAGCTGGGTTTCT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTAGTGGATTCGGAGAATaGGTTCTGGCTAGAACTAGT | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTSGFGE*VLARTS Trigger: ACTAGTTCTAGCCAGAACCCATTCTCCGAATCCACT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTTGGGAACGCTATTCTTaGAAGTTAACTGGAAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTWERYS*KLTGRV Trigger: GACCCTTCCAGTTAACTTCCAAGAATAGCGTTCCCA...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTTTAGTCATTAGACTTTaGGGACAGAAACCCAGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTLVIRL*GQKPSS Trigger: CGAGCTGGGTTTCTGTCCCCAAAGTCTAATGACTAA...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATTCCAAGGAATGGATTTaGGGTACTATGCCATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYSKEWI*GTMPYS Trigger: TGAATATGGCATAGTACCTCAAATCCATTCCTTGGA...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTAGACTCACAAAGACATaGATTCTGCAAGAGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTRLTKT*ILQEKA Trigger: TGCCTTCTCTTGCAGAATGCATGTCTTTGTGAGTCT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTGGATTTGAGGTACTATaGCATATTCAACACCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTGFEVL*HIQHQD Trigger: GTCCTGGTGTTGAATATGGCATAGTACCTCAAATCC...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATAATATTCCTAAGAGCTaGAGAAATCCGTGTCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYNIPKS*RNPCHS Trigger: GGAATGACACGGATTTCTCCAGCTCTTAGGAATATT...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACCTCACCCACTCACAGTaGATTCGGAGAATGGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHLTHSQ*IRRMGS Trigger: AGAACCCATTCTCCGAATCCACTGTGAGTGGGTGAG...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTAATATTCCTAAGAGCTaGAGAAATCCGTGTCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: KPLNWRKSYYALRERLKTNIPKS*RNPCHS Trigger: GGAATGACACGGATTTCTCCAGCTCTTAGGAATATT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACACACAGAGTTTAAAGTaGCGGTGTCTTCTGTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHTQSLK*RCLLSP Trigger: TGGAGACAGAAGACACCGGCACTTTAAACTCTGTGT...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACTCAAGCTTGCATTTGTaGCAGAATTCCATTCCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHSSLHL*QNSIPW Trigger: CCACGGAATGGAATTCTGCCACAAATGCAAGCTTGA...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACTCCGTGTCATTCCTTTaGATGACTTCAAGCTTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHSVSFL*MTSSLH Trigger: ATGCAAGCTTGAAGTCATGCAAAGGAATGACACGGA...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACCTATCTAGAGTAAACTaGCCAGGGTTCTTGTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KYGITIRIVSTRKVNQTHLSRVN*PGFLWF Trigger: AAACCACAAGAACCCTGGCCAGTTTACTCTAGATAG...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR CCA 72 bp | GGATCCATGCCTGCTGCTCCACGGGACAGCTGTATCTaGCCCGAGGTCCTCACTGTGGACCACTCGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSMPAAPRDSCI*PEVLTVDHSSQ Trigger: CTGACTCGAGTGGTCCACAGTGAGGACCTCGGGCCAGATACAGCTGTCCCGTGGAGCAGCAGGCATGGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAAGGACAAGATGGCCCTaGCCACCTGCCAGTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTRTRWP*PPASGN Trigger: GTTCCCACTGGCAGGTGGCAAGGGCCATCTTGTCCT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAACTCATCAGGAAGATTaGGGAGCCTGGGACCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTTHQED*GAWDQA Trigger: TGCCTGGTCCCAGGCTCCCAAATCTTCCTGATGAGT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR CCA 72 bp | AAAGGAGGCAAGACAGAGGATGCTTCTCGCAGAGGCTaGTTGGTGGACCTTAGGTCACACGGGGTTAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: KGGKTEDASRRG*LVDLRSHGVRC Trigger: GCATCTAACCCCGTGTGACCTAAGGTCCACCAACCAGCCTCTGCGAGAAGCATCCTCTGTCTTGCCTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR CCA 72 bp | GAGGCAAGACAGAGGATGCTTCTCGCAGAGGCTGGTTaGTGGACCTTAGGTCACACGGGGTTAGATGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EARQRMLLAEAG*WTLGHTGLDAF Trigger: AAAAGCATCTAACCCCGTGTGACCTAAGGTCCACCAACCAGCCTCTGCGAGAAGCATCCTCTGTCTTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGTGGGAACGCTATTCTaGGAAGTTAACTGGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTVGTLF*EVNWKG Trigger: ACCCTTCCAGTTAACTTCCAAGAATAGCGTTCCCAC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR GCA 72 bp | AGGAGTAACAAGGGAGTCGCCCTGGCATTCTATCAGTaGATTTCCCGTCTCCTGACCTCCCTTAGTCCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RSNKGVALAFYQ*ISRLLTSLSPN Trigger: GTTTGGACTAAGGGAGGTCAGGAGACGGGAAATGCACTGATAGAATGCCAGGGCGACTCCCTTGTTACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR CCA 72 bp | AGTCCAAACTCACCCACTCACAGTGGATTCGGAGAATaGGTTCTGGCTAGAACTAGTCCAACCCCCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SPNSPTHSGFGE*VLARTSPTPRH Trigger: GTGTCTGGGGGTTGGACTAGTTCTAGCCAGAACCCATTCTCCGAATCCACTGTGAGTGGGTGAGTTTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAACTTCAAGCTTGCATTaGTGGCAGAATTCCATTCCG | + |
|
Preference number: 3 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTTSSLH*WQNSIP Trigger: CGGAATGGAATTCTGCCACAAATGCAAGCTTGAAGT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR CCA 72 bp | GCAAGACAGAGGATGCTTCTCGCAGAGGCTGGTTGGTaGACCTTAGGTCACACGGGGTTAGATGCTTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ARQRMLLAEAGW*TLGHTGLDAFY Trigger: ATAAAAAGCATCTAACCCCGTGTGACCTAAGGTCCACCAACCAGCCTCTGCGAGAAGCATCCTCTGTCTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTATGCACATCTTCTCACTaGCTGACTCATCAGGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLCTSSH*LTHQED Trigger: ATCTTCCTGATGAGTCAGCAAGTGAGAAGATGTGCA...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCGTGGGAACGCTATTCTaGGAAGTTAACTGGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FEVLCHIQHQDKMALATCVGTLF*EVNWKG Trigger: ACCCTTCCAGTTAACTTCCAAGAATAGCGTTCCCAC...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR GCA 72 bp | AGAATTCCATTCCGTGGTAGCAGACTCACAAAGACATaGATTCTGCAAGAGAAGGCACGGCTTGAACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RIPFRGSRLTKT*ILQEKARLELL Trigger: CAGCAGTTCAAGCCGTGCCTTCTCTTGCAGAATGCATGTCTTTGTGAGTCTGCTACCACGGAATGGAATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTACTCATCAGGAAGATTaGGGAGCCTGGGACCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KPLNWRKSYYALRERLKTTHQED*GAWDQA Trigger: TGCCTGGTCCCAGGCTCCCAAATCTTCCTGATGAGT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACAGGACAAGATGGCCCTaGCCACCTGCCAGTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KYGITIRIVSTRKVNQTHRTRWP*PPASGN Trigger: GTTCCCACTGGCAGGTGGCAAGGGCCATCTTGTCCT...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR CCA 72 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTaGAGAAAGTCTTATTATGCATTGAGAGAACGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLTLCTPVKPLN*RKSYYALRERL Trigger: CAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACACTCATCAGGAAGATTaGGGAGCCTGGGACCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KYGITIRIVSTRKVNQTHTHQED*GAWDQA Trigger: TGCCTGGTCCCAGGCTCCCAAATCTTCCTGATGAGT...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTGTGGGAACGCTATTCTaGGAAGTTAACTGGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KPLNWRKSYYALRERLKTVGTLF*EVNWKG Trigger: ACCCTTCCAGTTAACTTCCAAGAATAGCGTTCCCAC...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTTGCACATCTTCTCACTaGCTGACTCATCAGGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KPLNWRKSYYALRERLKTCTSSH*LTHQED Trigger: ATCTTCCTGATGAGTCAGCAAGTGAGAAGATGTGCA...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTACTTCAAGCTTGCATTaGTGGCAGAATTCCATTCCG | + |
|
Preference number: 3 (lower is better) Translates to: KPLNWRKSYYALRERLKTTSSLH*WQNSIP Trigger: CGGAATGGAATTCTGCCACAAATGCAAGCTTGAAGT...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR CCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAGTGCCCTTTTGTCCATaGAGGCTGCAGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTVPFCP*RLQRRR Trigger: CCGCCGCCGCTGCAGCCTCCATGGACAAAAGGGCAC...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTAGCAGCCCGACTCTGCTaGAGGGTCCTTGTGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLAARLC*RVLVAW Trigger: CCACGCCACAAGGACCCTCCAGCAGAGTCGGGCTGC...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCGGTGCTGGTGGCTGCTaGAGCAGCCCGACTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FEVLCHIQHQDKMALATCGAGGC*SSPTLL Trigger: CAGCAGAGTCGGGCTGCTGCAGCAGCCACCAGCACC...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR GCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACACATCCTCAGACAGACTaGAGCCCATCCACTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTHPQTD*SPSTGR Trigger: ACGTCCAGTGGATGGGCTGCAGTCTGTCTGAGGATG...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| 3UTR CAA 72 bp | GGAGGCAAGACAGAGGATGCTTCTCGCAGAGGCTGGTaGGTGGACCTTAGGTCACACGGGGTTAGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGKTEDASRRGW*VDLRSHGVRCF Trigger: AAAGCATCTAACCCCGTGTGACCTAAGGTCCACCAACCAGCCTCTGCGAGAAGCATCCTCTGTCTTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR TCA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACACTTCCAGCACGTTGGTaGTGTCGTAAATCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTLPARW*CRKSSS Trigger: AGAGGAGGATTTACGACATCACCAACGTGCTGGAAG...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTACATCCTCAGACAGACTaGAGCCCATCCACTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLHPQTD*SPSTGR Trigger: ACGTCCAGTGGATGGGCTGCAGTCTGTCTGAGGATG...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCCATCGAAGAGGTCACTaGTGCCCTCTTCCTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEVLCHIQHQDKMALATCHRRGH*CPLPPP Trigger: TGGGGGAGGAAGAGGGCATCAGTGACCTCTTCGATG...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTTGGCGGCCGGCTCCGTaGCGGGGACACTGGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPLNWRKSYYALRERLKTWRPAP*RGHWGE Trigger: TTCTCCCCAGTGTCCCCGGCACGGAGCCGGCCGCCA...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTGCCGCCGCGTCCTGGTaGTGGTGGCTGCTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPLNWRKSYYALRERLKTAAASW*WWLLQQ Trigger: CTGCTGCAGCAGCCACCAGCACCAGGACGCGGCGGC...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGCGGTCACCAGGTACTaGTCCAGGGCGGGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYAVTRY*SRAGWI Trigger: GATCCAGCCCGCCCTGGAGCAGTACCTGGTGACCGC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTACTGCAGCCCATCCACTaGACGTTGTTCTTAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLLQPIH*TLFLDF Trigger: GAAGTCTAAGAACAACGTCCAGTGGATGGGCTGCAG...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTAGCAGTCACTATGTCCTaGGTTGTTAGAAGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLAVTMS*VVRSQV Trigger: GACTTGGCTTCTAACAACTCAGGACATAGTGACTGC...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR GCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACGGATCTGGATGTACGTaGCCGGGGCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KYGITIRIVSTRKVNQTHGSGCT*PGRRRR Trigger: CCGCCGCCGCCGCCCCGGGCACGTACATCCAGATCC...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCCACCTTGAGCACCTCTaGTGCCTTGTTCAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FEVLCHIQHQDKMALATCHLEHL*CLVQIQ Trigger: CTGGATCTGAACAAGGCAGCAGAGGTGCTCAAGGTG...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR CCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACGCCGCGTCCTGGTGCTaGTGGCTGCTGCAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KYGITIRIVSTRKVNQTHAASWC*WLLQQP Trigger: GGGCTGCTGCAGCAGCCACCAGCACCAGGACGCGGC...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATCATCCTCAGACAGACTaGAGCCCATCCACTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYHPQTD*SPSTGR Trigger: ACGTCCAGTGGATGGGCTGCAGTCTGTCTGAGGATG...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATCACCTTGAGCACCTCTaGTGCCTTGTTCAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYHLEHL*CLVQIQ Trigger: CTGGATCTGAACAAGGCAGCAGAGGTGCTCAAGGTG...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR CCA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACGTCAGGGCGCCACTTTaGAGGGAGGTGGCACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KYGITIRIVSTRKVNQTHVRAPL*REVAQD Trigger: GTCCTGTGCCACCTCCCTCCAAAGTGGCGCCCTGAC...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR TCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATCTTCCAGCACGTTGGTaGTGTCGTAAATCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYLPARW*CRKSSS Trigger: AGAGGAGGATTTACGACATCACCAACGTGCTGGAAG...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTCACCTTGAGCACCTCTaGTGCCTTGTTCAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPLNWRKSYYALRERLKTHLEHL*CLVQIQ Trigger: CTGGATCTGAACAAGGCAGCAGAGGTGCTCAAGGTG...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTCACACTGTGTACGCCAGTTAAGCCCCTTAACTGGAGAAAGTCTTATTATGCAGTCACTATGTCCTaGGTTGTTAGAAGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLTLCTPVKPLNWRKSYYAVTMS*VVRSQV Trigger: GACTTGGCTTCTAACAACTCAGGACATAGTGACTGC...ATAATAAGACTTTCTCCAGTTAAGGGGCTTAACTGGCGTACACAGTGTGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR CAA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACAAGCACCTCTGCTGCCTaGTTCAGATCCAGGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTSTSAA*FRSRTP Trigger: TGGGGTCCTGGATCTGAACAAGGCAGCAGAGGTGCT...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTCATCCAAAAAGGCTGTGGAGGCTCTTGCCGCCTCCTAGTGGGACACTAGCTAGCAGTGCCCTTTaGTCCATGGAGGCTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLHPKRLWRLLPPPSGTLASSAL*SMEAAA Trigger: CGCTGCAGCCTCCATGGACAAAAGGGCACTGCTAGC...TAGTGTCCCACTAGGAGGCGGCAAGAGCCTCCACAGCCTTTTTGGATGAAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
||
| CDS-3UTR CAA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCAGCACCTCTGCTGCCTaGTTCAGATCCAGGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FEVLCHIQHQDKMALATCSTSAA*FRSRTP Trigger: TGGGGTCCTGGATCTGAACAAGGCAGCAGAGGTGCT...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS-3UTR CAA 90 bp | GTCACCCAGCCTCCTCCGCAAGGCATCTTCCTCAGATCCCTTCTCACACACACATCACTATGTCCTGAGTaGTTAGAAGCCAAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTQPPPQGIFLRSLLTHTSLCPE*LEAKSL Trigger: CAAAGACTTGGCTTCTAACAACTCAGGACATAGTGA...TGTGTGTGTGAGAAGGGATCTGAGGAAGATGCCTTGCGGAGGAGGCTGGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
||
| CDS TCA 90 bp | CAGAGGAGAGAGGTTTGCTGTAGAAACCGAGCAGTCACTATGTCCTaGGTTGTTAGAAGCCAAGTCTTTGGAAGTGGGCTTGGGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: QRREVCCRNRAVTMS*VVRSQVFGSGLGDI Trigger: AATATCCCCAAGCCCACTTCCAAAGACTTGGCTTCTAACAACTCAGGACATAGTGACTGCTCGGTTTCTACAGCAAACCTCTCTCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| CDS-3UTR CAA 90 bp | AAATACGGCATCACAATACGAATAGTTTCAACAAGAAAAGTCAACCAAACACACGGTCAGGGCGCCACTTaGGAGGGAGGTGGCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: KYGITIRIVSTRKVNQTHGQGAT*EGGGTG Trigger: TCCTGTGCCACCTCCCTCCAAAGTGGCGCCCTGACC...GTGTGTTTGGTTGACTTTTCTTGTTGAAACTATTCGTATTGTGATGCCGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
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| CDS-3UTR CAA 90 bp | TTTGAGGTACTATGCCATATTCAACACCAGGACAAGATGGCCCTTGCCACCTGCTCACTATGTCCTGAGTaGTTAGAAGCCAAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: FEVLCHIQHQDKMALATCSLCPE*LEAKSL Trigger: CAAAGACTTGGCTTCTAACAACTCAGGACATAGTGA...GCAGGTGGCAAGGGCCATCTTGTCCTGGTGTTGAATATGGCATAGTACCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| CDS-3UTR CAA 90 bp | AAGCCCCTTAACTGGAGAAAGTCTTATTATGCATTGAGAGAACGCTTGAAGACTTTAGAAGCCAAGTCTTaGGAAGTGGGCTTGGGGATA | + |
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Preference number: 5 (lower is better) Translates to: KPLNWRKSYYALRERLKTLEAKS*EVGLGI Trigger: TATCCCCAAGCCCACTTCCAAAGACTTGGCTTCTAA...AGTCTTCAAGCGTTCTCTCAATGCATAATAAGACTTTCTCCAGTTAAGGGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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| CDS GCA 72 bp | CTGATGGCCACTCTCGCCCAGTTCCAGCCTTCGCTTTaGCGGTGGGCCACCGCCGCCGCCGCGTCCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LMATLAQFQPSL*RWATAAAASWC Trigger: GCACCAGGACGCGGCGGCGGCGGTGGCCCACCGGCAAAGCGAAGGCTGGAACTGGGCGAGAGTGGCCATCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
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| CDS CAA 72 bp | ACTGATGGCCACTCTCGCCCAGTTCCAGCCTTCGCTTaGCCGGTGGGCCACCGCCGCCGCCGCGTCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TDGHSRPVPAFA*PVGHRRRRVLV Trigger: CACCAGGACGCGGCGGCGGCGGTGGCCCACCGGCAAAGCGAAGGCTGGAACTGGGCGAGAGTGGCCATCAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102948.11 |
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| CDS TCA 72 bp | GAGGTTTGCTGTAGAAACCGAGCAGTCACTATGTCCTaGGTTGTTAGAAGCCAAGTCTTTGGAAGTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EVCCRNRAVTMS*VVRSQVFGSGL Trigger: AAGCCCACTTCCAAAGACTTGGCTTCTAACAACTCAGGACATAGTGACTGCTCGGTTTCTACAGCAAACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102948.11 ENSMUST00000221536.2 ENSMUST00000222730.2 |
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