Pregenerated sensors for E2F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018983Ensembl transcript IDs: ENSMUST00000061721.6
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCCCTGAGGGTAGGTGGAAGGCCTCTCAGACCCCGTCACCCCTaGGTACACCTCTCTGGACACGTGGCCTTGGTTAAGCCCATTCTC | + |
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Preference number: 1 (lower is better) Translates to: GSLRVGGRPLRPRHP*VHLSGHVALVKPIL Trigger: GAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACGGGGTCTGAGAGGCCTTCCACCTACCCTCAGGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 90 bp | AAGGCTGGAAGAGAGCCGCGCAGACGGAGGGTGACACCTGGTGTCTaGTGTCCCCCATCTGGGCAGAGAGCCTGTCAATCTGTCTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: KAGREPRRRRVTPGV*CPPSGQRACQSVCE Trigger: CTCACAGACAGATTGACAGGCTCTCTGCCCAGATGGGGGACACCAGACACCAGGTGTCACCCTCCGTCTGCGCGGCTCTCTTCCAGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 90 bp | CCTAAGGAAGGCTGGAAGAGAGCCGCGCAGACGGAGGGTGACACCTaGTGTCTGGTGTCCCCCATCTGGGCAGAGAGCCTGTCAATCTGT | + |
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Preference number: 1 (lower is better) Translates to: PKEGWKRAAQTEGDT*CLVSPIWAESLSIC Trigger: ACAGATTGACAGGCTCTCTGCCCAGATGGGGGACACCAGACACCAGGTGTCACCCTCCGTCTGCGCGGCTCTCTTCCAGCCTTCCTTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR GCA 90 bp | CTATGGGCAGAACAAGAGAGACCAAGAGCTCTTCCCAGATCCCCATaGCAGGAGAGGTGGCAGGCGCCAGCCTATCCCGTCATGAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LWAEQERPRALPRSP*QERWQAPAYPVMSC Trigger: GCAGCTCATGACGGGATAGGCTGGCGCCTGCCACCTCTCCTGGCATGGGGATCTGGGAAGAGCTCTTGGTCTCTCTTGTTCTGCCCATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR TCA 90 bp | TGCTGGTGGTTCAAGGCAGGACTTTGGGTGAAACCAGGAGGTAGGTaGCCCACATGGAGTCCCAACCCAGGGACTCCAGACCTTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: CWWFKAGLWVKPGGR*PTWSPNPGTPDLPT Trigger: GGTGGGAAGGTCTGGAGTCCCTGGGTTGGGACTCCATGTGGGTCACCTACCTCCTGGTTTCACCCAAAGTCCTGCCTTGAACCACCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR GCA 90 bp | GCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTaGCGTCTCCTGACCACAGGAACCCTGGATGGTCAGTCTATGGGC | + |
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Preference number: 1 (lower is better) Translates to: AHSPCLERRGRKADS*RLLTTGTLDGQSMG Trigger: GCCCATAGACTGACCATCCAGGGTTCCTGTGGTCAGGAGACGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR TCA 90 bp | CATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGTCTCCTaGCCACAGGAACCCTGGATGGTCAGTCTATGGGCAGAACAAGAG | + |
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Preference number: 1 (lower is better) Translates to: HAWKGEEEKRTLAVS*PQEPWMVSLWAEQE Trigger: CTCTTGTTCTGCCCATAGACTGACCATCCAGGGTTCCTGTGGTCAGGAGACGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR GCA 90 bp | CACACCGATGGCGGCATGAGCAAACTCTTTACAACACGGAATCTGTaGAGAAGAGAGGCTGAGGCCTCACAGGGAGGGGAAACCACACTG | + |
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Preference number: 1 (lower is better) Translates to: HTDGGMSKLFTTRNL*RREAEASQGGETTL Trigger: CAGTGTGGTTTCCCCTCCCTGTGAGGCCTCAGCCTCTCTTCTGCACAGATTCCGTGTTGTAAAGAGTTTGCTCATGCCGCCATCGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 90 bp | TCTCCTCCACCCAGAGCCCAAGGCACAGAGGTCAGATATCTCTGTTaGCGCACAGCTAAACGGCAAAGACCAGGAAACAGCAATGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SPPPRAQGTEVRYLC*RTAKRQRPGNSNAV Trigger: GACAGCATTGCTGTTTCCTGGTCTTTGCCGTTTAGCTGTGCGCCAACAGAGATATCTGACCTCTGTGCCTTGGGCTCTGGGTGGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 90 bp | AAGAAAAGCGGACTCTTGCCGTCTCCTGACCACAGGAACCCTGGATaGTCAGTCTATGGGCAGAACAAGAGAGACCAAGAGCTCTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KKSGLLPSPDHRNPG*SVYGQNKRDQELFP Trigger: TGGGAAGAGCTCTTGGTCTCTCTTGTTCTGCCCATAGACTGACCATCCAGGGTTCCTGTGGTCAGGAGACGGCAAGAGTCCGCTTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR TCA 90 bp | CCAGGGATATCAGCAGGGGACACTGGTAGGGCTGGGAAACTTCCCTaGAGAAAGTATTCCCCTCAGAAAGAAACTGGTAGCTTTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: PGISAGDTGRAGKLP*RKYSPQKETGSFPT Trigger: GGTGGGAAAGCTACCAGTTTCTTTCTGAGGGGAATACTTTCTTCAGGGAAGTTTCCCAGCCCTACCAGTGTCCCCTGCTGATATCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR TCA 90 bp | AAACCTGTCACCAAGCTCCTGTCACATCTGACCTTGGAAGTGAAGTaGGGGCTTTGGGACAGTGGGTGTTTAAGGAATCTTCCCCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: KPVTKLLSHLTLEVK*GLWDSGCLRNLPPP Trigger: TGGAGGGGGAAGATTCCTTAAACACCCACTGTCCCAAAGCCCTCACTTCACTTCCAAGGTCAGATGTGACAGGAGCTTGGTGACAGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 90 bp | CCTGTCACATCTGACCTTGGAAGTGAAGTGAGGGCTTTGGGACAGTaGGTGTTTAAGGAATCTTCCCCCTCCAACTGCAACCAAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: PVTSDLGSEVRALGQ*VFKESSPSNCNQET Trigger: TGTTTCTTGGTTGCAGTTGGAGGGGGAAGATTCCTTAAACACCCACTGTCCCAAAGCCCTCACTTCACTTCCAAGGTCAGATGTGACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR GCA 90 bp | AGGGCTTTGGGACAGTGGGTGTTTAAGGAATCTTCCCCCTCCAACTaGAACCAAGAAACAAAAATAATCCTCCCAGGGAAACATGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RALGQWVFKESSPSN*NQETKIILPGKHGQ Trigger: CTGCCCATGTTTCCCTGGGAGGATTATTTTTGTTTCTTGGTTGCAGTTGGAGGGGGAAGATTCCTTAAACACCCACTGTCCCAAAGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR GCA 90 bp | GAGCCGCCATTATTTAATGCCCAATTATCACAACAGAATGAAACTTaGTGGTGGTTCAAGGCAGGACTTTGGGTGAAACCAGGAGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: EPPLFNAQLSQQNET*WWFKAGLWVKPGGR Trigger: CCTACCTCCTGGTTTCACCCAAAGTCCTGCCTTGAACCACCAGCAAGTTTCATTCTGTTGTGATAATTGGGCATTAAATAATGGCGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 90 bp | GGATGGAGGAGATGGAGAATTCCAAGCCGGTGCCTTGGCTGGGCCTaGCATTTTCTAAAATTACAAAGCCTAAGTGCAATTAATTCAAGC | + |
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Preference number: 1 (lower is better) Translates to: GWRRWRIPSRCLGWA*HFLKLQSLSAINSS Trigger: GCTTGAATTAATTGCACTTAGGCTTTGTAATTTTAGAAAATGCCAGGCCCAGCCAAGGCACCGGCTTGGAATTCTCCATCTCCTCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 90 bp | TCTCTAGGATGGAGGAGATGGAGAATTCCAAGCCGGTGCCTTGGCTaGGCCTGGCATTTTCTAAAATTACAAAGCCTAAGTGCAATTAAT | + |
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Preference number: 1 (lower is better) Translates to: SLGWRRWRIPSRCLG*AWHFLKLQSLSAIN Trigger: ATTAATTGCACTTAGGCTTTGTAATTTTAGAAAATGCCAGGCCCAGCCAAGGCACCGGCTTGGAATTCTCCATCTCCTCCATCCTAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCTCAGACCCCGTCACCCCTGGGTACACCTCTCTGGACACGTGGCCTTGGAGGTCTCTGACCTCCTaGGGAAGGGCATCTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GLSDPVTPGYTSLDTWPWRSLTS*GRASRR Trigger: CCTCCTAGATGCCCTTCCTCAGGAGGTCAGAGACCT...CCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACGGGGTCTGAGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCTCTTCTCGCTAAGCCAAGCTCTCCTCCACCCAGAGCCCAAGGCACAGTGTGCGCTTAGGCACTaGGCGTGGGTGGGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: AALFSLSQALLHPEPKAQCALRH*AWVGLS Trigger: AGACAGGCCCACCCACGCCCAGTGCCTAAGCGCACA...CTGTGCCTTGGGCTCTGGGTGGAGGAGAGCTTGGCTTAGCGAGAAGAGGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGAAGTCAGGGTCCCCCTaGCCCTCAGAAGGAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTKSGSP*PSEGGS Trigger: ACTGCCTCCTTCTGAGGGGCAGGGGGACCCTGACTT...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | AAACCCAGGCTCCCTGAGGGTAGGTGGAAGGCCTCTCAGACCCCGTCACCCCTGCTCAGAAGGAGGCAGTaGGCCCTTTCCCTGAACATG | + |
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Preference number: 2 (lower is better) Translates to: KPRLPEGRWKASQTPSPLLRRRQ*ALSLNM Trigger: CATGTTCAGGGAAAGGGCTCACTGCCTCCTTCTGAG...CAGGGGTGACGGGGTCTGAGAGGCCTTCCACCTACCCTCAGGGAGCCTGGGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGCACCTTCCAGGTCTCTaGCCTCCTGAGGAAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTHLPGL*PPEEGH Trigger: ATGCCCTTCCTCAGGAGGTCAGAGACCTGGAAGGTG...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAGAACAAGAGAGACCAAGAGCTCTTCCCAGATCCCCATGCCAGGAGAGGCGCCCTAAGGAAGGCTaGAAGAGAGCCGCGCAGACG | + |
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Preference number: 2 (lower is better) Translates to: WAEQERPRALPRSPCQERRPKEG*KRAAQT Trigger: CGTCTGCGCGGCTCTCTTCCAGCCTTCCTTAGGGCG...CCTCTCCTGGCATGGGGATCTGGGAAGAGCTCTTGGTCTCTCTTGTTCTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGTCTCACGGGCGTGGCCTCCTaGTTTTCCCAGGAGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AHSPCLERRGRKADSCRLTGVAS*FSQELF Trigger: GAAGAGCTCCTGGGAAAAGCAGGAGGCCACGCCCGT...GAGACGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAGAACAAGAGAGACCAAGAGCTCTTCCCAGATCCCCATGCCAGGAGAGGGTGACACCTGGTGTCTaGTGTCCCCCATCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: WAEQERPRALPRSPCQERVTPGV*CPPSGQ Trigger: CTGCCCAGATGGGGGACACCAGACACCAGGTGTCAC...CCTCTCCTGGCATGGGGATCTGGGAAGAGCTCTTGGTCTCTCTTGTTCTGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGGCCAGACCTGTAGCCACCACGGTCCCTGAAGAGCCTTGTGGGAGAAGAACCAGGAAACAGCAATaGTGTCTCCGGCCTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: RLARPVATTVPEEPCGRRTRKQQ*CLRPHV Trigger: CACATGAGGCCGGAGACAGCATTGCTGTTTCCTGGT...TCTTCTCCCACAAGGCTCTTCAGGGACCGTGGTGGCTACAGGTCTGGCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAGAACAAGAGAGACCAAGAGCTCTTCCCAGATCCCCATGCCAGGAGAGGCCTCCCAGGGAAACATaGGCAGACCCCAGGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: WAEQERPRALPRSPCQERPPRET*ADPRVF Trigger: AAACACCCTGGGGTCTGCCCATGTTTCCCTGGGAGG...CCTCTCCTGGCATGGGGATCTGGGAAGAGCTCTTGGTCTCTCTTGTTCTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | TTAAGCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGAGTGAGCCCTTTCCCTaGACATGGCCACCTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: LSPFSMPGKARKKSGLLPSEPFP*TWPPAP Trigger: GGGTGCAGGTGGCCATGTTCAGGGAAAGGGCTCACT...CGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAACTTAGGCACTGGGCGTaGGTGGGCCTGTCTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKLRHWA*VGLSEE Trigger: CTCCTCAGACAGGCCCACCCACGCCCAGTGCCTAAG...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACACCTCTCTGGACACGTGGCCTTGGTTAAGCCCATTCTCCATGCCTGGCCCGAAGCACTCCAGTaGGGAAAGGTGCAAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: WVHLSGHVALVKPILHAWPEALQ*GKVQTC Trigger: ACAGGTTTGCACCTTTCCCCACTGGAGTGCTTCGGG...CCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | GCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGTCTCCTAGGATGGAGGAGATaGAGAATTCCAAGCCGGTGC | + |
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Preference number: 2 (lower is better) Translates to: AHSPCLERRGRKADSCRLLGWRR*RIPSRC Trigger: GCACCGGCTTGGAATTCTCCATCTCCTCCATCCTAG...GAGACGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCCACCCAGAGCCCAAGGCACAGAGGTCAGATATCTCTGTTGGCGCACAGTGGGTGGGCCTGTCTaGGGAGAAACTAGAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: SPPPRAQGTEVRYLCWRTVGGPV*GETRTN Trigger: ATTTGTTCTAGTTTCTCCTCAGACAGGCCCACCCAC...TGTGCGCCAACAGAGATATCTGACCTCTGTGCCTTGGGCTCTGGGTGGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTCCACCCAGAGCCCAAGGCACAGAGGTCAGATATCTCTGTTGGCGCACACCCATTCTCCATGCCTaGAAAGGCGAGGAAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SPPPRAQGTEVRYLCWRTPILHA*KGEEEK Trigger: CTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGG...TGTGCGCCAACAGAGATATCTGACCTCTGTGCCTTGGGCTCTGGGTGGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGTCTTCCCCCTCCAACTaGAACCAAGAAACAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTSSPSN*NQETKI Trigger: TATTTTTGTTTCTTGGTTGCAGTTGGAGGGGGAAGA...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAAGCGTTAAGTGCTTCTTaGAAAAGTCAGGGTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKALSAS*KSQGPP Trigger: AGGGGGACCCTGACTTTTTCAAGAAGCACTTAACGC...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAAGCTGGGAAACTTCCCTaGAGAAAGTATTCCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKAGKLP*RKYSPQ Trigger: CTGAGGGGAATACTTTCTTCAGGGAAGTTTCCCAGC...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCTCTTCTCGCTAAGCCAAGCTCTCCTCCACCCAGAGCCCAAGGCACAGCATATGTCAAAAGGTTaGACACTCGGTGTAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: AALFSLSQALLHPEPKAQHMSKG*TLGVKI Trigger: TATTTTTACACCGAGTGTCCAACCTTTTGACATATG...CTGTGCCTTGGGCTCTGGGTGGAGGAGAGCTTGGCTTAGCGAGAAGAGGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAATGGATGGTCAGTCTATaGGCAGAACAAGAGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKWMVSL*AEQERP Trigger: TGGTCTCTCTTGTTCTGCCCATAGACTGACCATCCA...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCCTAAGTGCAATTAATTCAAGCAAACTGGATAGTCCCCTCAAGACCCAGCTGTCAATCTGTCTGTaGGGAGGTAGACAGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSLSAINSSKLDSPLKTQLSICL*GGRQMQ Trigger: CTGCATCTGTCTACCTCCTCACAGACAGATTGACAG...CTGGGTCTTGAGGGGACTATCCAGTTTGCTTGAATTAATTGCACTTAGGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGGAGTCCCCAGGGATCTGCGCTGGGTCTTTTaGCTGAACTTGAATCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SKPIYKFNSAKCSGVPRDLRWVF*LNLNLD Trigger: GTCCAGATTCAAGTTCAGTCAAAAGACCCAGCGCAG...ATCCCTGGGGACTCCAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CCA 90 bp | TTCAATGGTGCATCTCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGCTGGTGTCCCCCATCTaGGCAGAGAGCCTGTCAATC | + |
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Preference number: 2 (lower is better) Translates to: FNGASPSLFTSLILLNALLVSPI*AESLSI Trigger: GATTGACAGGCTCTCTGCCCAGATGGGGGACACCAG...CAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGAGATGCACCATTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CAA 90 bp | CTGAGGGTGAACTTTAGAGACGACGAGGTCACATATGTCAAAAGGTaGGACACTCGGTGTAAAAATAGACAAATTTCAAGTGTGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LRVNFRDDEVTYVKR*DTRCKNRQISSVCG Trigger: CCCACACACACTTGAAATTTGTCTATTTTTACACCGAGTGTCCAACCTTTTGACATATGTGACCTCGTCGTCTCTAAAGTTCACCCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCTAAGTGCAATTAATTCAAGCAAACTGGATAGTCCCCTCAAGACCCAGTACAAAGGCGTTAAGTaGTTCTTGAAAAAGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSLSAINSSKLDSPLKTQYKGVK*FLKKSG Trigger: CCCTGACTTTTTCAAGAAGCACTTAACGCCTTTGTA...CTGGGTCTTGAGGGGACTATCCAGTTTGCTTGAATTAATTGCACTTAGGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 72 bp | GGCTGGAAGAGAGCCGCGCAGACGGAGGGTGACACCTaGTGTCTGGTGTCCCCCATCTGGGCAGAGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GWKRAAQTEGDT*CLVSPIWAESL Trigger: CAGGCTCTCTGCCCAGATGGGGGACACCAGACACCAGGTGTCACCCTCCGTCTGCGCGGCTCTCTTCCAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR-3UTR CAA 90 bp | GGCCTCTCAGACCCCGTCACCCCTGGGTACACCTCTCTGGACACGTGGCCTTGGAGGAAGCCAGCCCCCTaGGCTACCTCCCCCAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: GLSDPVTPGYTSLDTWPWRKPAP*ATSPRV Trigger: TACTCTGGGGGAGGTAGCCAAGGGGGCTGGCTTCCT...CCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACGGGGTCTGAGAGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR TCA 72 bp | AGGTGGCAGGCGCCAGCCTATCCCGTCATGAGCTGCTaGGGCCTAGTCTGCAGGGAAGAGCACCCCACCCCT | + |
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Preference number: 3 (lower is better) Translates to: RWQAPAYPVMSC*GLVCREEHPTP Trigger: AGGGGTGGGGTGCTCTTCCCTGCAGACTAGGCCTCAGCAGCTCATGACGGGATAGGCTGGCGCCTGCCACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| 3UTR CCA 72 bp | AGAGAGCCGCGCAGACGGAGGGTGACACCTGGTGTCTaGTGTCCCCCATCTGGGCAGAGAGCCTGTCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: REPRRRRVTPGV*CPPSGQRACQS Trigger: AGATTGACAGGCTCTCTGCCCAGATGGGGGACACCAGACACCAGGTGTCACCCTCCGTCTGCGCGGCTCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR TCA 72 bp | TCCCTGAACATGGCCACCTGCACCCGTAGTCCTTCATaGAGGGGTCGGAGGTCAGAAGAGGAGGGTCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLNMATCTRSPS*RGRRSEEEGQG Trigger: GCCCTGACCCTCCTCTTCTGACCTCCGACCCCTTCATGAAGGACTACGGGTGCAGGTGGCCATGTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | AGGGTAGGTGGAAGGCCTCTCAGACCCCGTCACCCCTaGGTACACCTCTCTGGACACGTGGCCTTGGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RVGGRPLRPRHP*VHLSGHVALVK Trigger: CTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACGGGGTCTGAGAGGCCTTCCACCTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | GTCACCCCTGGGTACACCTCTCTGGACACGTGGCCTTaGTTAAGCCCATTCTCCATGCCTGGAAAGGCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTPGYTSLDTWP*LSPFSMPGKAR Trigger: CCTCGCCTTTCCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | GACCCCGTCACCCCTGGGTACACCTCTCTGGACACGTaGCCTTGGTTAAGCCCATTCTCCATGCCTGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DPVTPGYTSLDT*PWLSPFSMPGK Trigger: CTTTCCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCCTCTTCTCGCTAAGCCAAGCTCTCCTCCACCCAGAGCCCAAGGCACAGGGCGTTAAGTGCTTCTaGAAAAAGTCAGGGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AALFSLSQALLHPEPKAQGVKCF*KKSGSP Trigger: GGGGGACCCTGACTTTTTCAAGAAGCACTTAACGCC...CTGTGCCTTGGGCTCTGGGTGGAGGAGAGCTTGGCTTAGCGAGAAGAGGGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTACACCTCTCTGGACACGTGGCCTTGGTTAAGCCCATTCTCCATGCCTGGTTCCAAGCCGGTGCCTaGGCTGGGCCTGGCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WVHLSGHVALVKPILHAWFQAGA*AGPGIF Trigger: GAAAATGCCAGGCCCAGCCAAGGCACCGGCTTGGAA...CCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCTCAGACCCCGTCACCCCTGGGTACACCTCTCTGGACACGTGGCCTTGGACCCCAGGGTGTTTCTaGTTTTCTTCTCACTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLSDPVTPGYTSLDTWPWTPGCF*FSSHSS Trigger: AGAGGAGTGAGAAGAAAACAAGAAACACCCTGGGGT...CCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACGGGGTCTGAGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGAGTGAAGTGAGGGCTTaGGGACAGTGGGTGTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTSEVRA*GQWVFK Trigger: CTTAAACACCCACTGTCCCAAAGCCCTCACTTCACT...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR GCA 72 bp | CCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTaGCGTCTCCTGACCACAGGAACCCTGGATGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCLERRGRKADS*RLLTTGTLDGQ Trigger: CTGACCATCCAGGGTTCCTGTGGTCAGGAGACGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR TCA 72 bp | TTCAAGGCAGGACTTTGGGTGAAACCAGGAGGTAGGTaGCCCACATGGAGTCCCAACCCAGGGACTCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FKAGLWVKPGGR*PTWSPNPGTPD Trigger: GTCTGGAGTCCCTGGGTTGGGACTCCATGTGGGTCACCTACCTCCTGGTTTCACCCAAAGTCCTGCCTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | GGACACGTGGCCTTGGTTAAGCCCATTCTCCATGCCTaGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: GHVALVKPILHA*KGEEEKRTLAV Trigger: GACGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR GCA 72 bp | GGCGGCATGAGCAAACTCTTTACAACACGGAATCTGTaGAGAAGAGAGGCTGAGGCCTCACAGGGAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGMSKLFTTRNL*RREAEASQGGE Trigger: TTCCCCTCCCTGTGAGGCCTCAGCCTCTCTTCTGCACAGATTCCGTGTTGTAAAGAGTTTGCTCATGCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | GGACTCTTGCCGTCTCCTGACCACAGGAACCCTGGATaGTCAGTCTATGGGCAGAACAAGAGAGACCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLLPSPDHRNPG*SVYGQNKRDQE Trigger: CTCTTGGTCTCTCTTGTTCTGCCCATAGACTGACCATCCAGGGTTCCTGTGGTCAGGAGACGGCAAGAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR TCA 72 bp | CCACTCCTCACAGCCACACAGAGAAGGGACTCAGCCTaGCATCTTCAATGGTGCATCTCCAAGCCTATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PLLTATQRRDSA*HLQWCISKPIY Trigger: GTAAATAGGCTTGGAGATGCACCATTGAAGATGTCAGGCTGAGTCCCTTCTCTGTGTGGCTGTGAGGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | TCTGACCTTGGAAGTGAAGTGAGGGCTTTGGGACAGTaGGTGTTTAAGGAATCTTCCCCCTCCAACTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SDLGSEVRALGQ*VFKESSPSNCN Trigger: GTTGCAGTTGGAGGGGGAAGATTCCTTAAACACCCACTGTCCCAAAGCCCTCACTTCACTTCCAAGGTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | AGGATGGAGGAGATGGAGAATTCCAAGCCGGTGCCTTaGCTGGGCCTGGCATTTTCTAAAATTACAAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RMEEMENSKPVP*LGLAFSKITKP Trigger: AGGCTTTGTAATTTTAGAAAATGCCAGGCCCAGCCAAGGCACCGGCTTGGAATTCTCCATCTCCTCCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR TCA 72 bp | ACCAAGCTCCTGTCACATCTGACCTTGGAAGTGAAGTaGGGGCTTTGGGACAGTGGGTGTTTAAGGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TKLLSHLTLEVK*GLWDSGCLRNL Trigger: AAGATTCCTTAAACACCCACTGTCCCAAAGCCCTCACTTCACTTCCAAGGTCAGATGTGACAGGAGCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | TGGAGGAGATGGAGAATTCCAAGCCGGTGCCTTGGCTaGGCCTGGCATTTTCTAAAATTACAAAGCCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: WRRWRIPSRCLG*AWHFLKLQSLS Trigger: ACTTAGGCTTTGTAATTTTAGAAAATGCCAGGCCCAGCCAAGGCACCGGCTTGGAATTCTCCATCTCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | TTTAATGCCCAATTATCACAACAGAATGAAACTTGCTaGTGGTTCAAGGCAGGACTTTGGGTGAAACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FNAQLSQQNETC*WFKAGLWVKPG Trigger: TCCTGGTTTCACCCAAAGTCCTGCCTTGAACCACCAGCAAGTTTCATTCTGTTGTGATAATTGGGCATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR GCA 72 bp | TTATTTAATGCCCAATTATCACAACAGAATGAAACTTaGTGGTGGTTCAAGGCAGGACTTTGGGTGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: LFNAQLSQQNET*WWFKAGLWVKP Trigger: TGGTTTCACCCAAAGTCCTGCCTTGAACCACCAGCAAGTTTCATTCTGTTGTGATAATTGGGCATTAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CCA 72 bp | ACTTTAGAGACGACGAGGTCACATATGTCAAAAGGTTaGACACTCGGTGTAAAAATAGACAAATTTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLETTRSHMSKG*TLGVKIDKFQV Trigger: CACTTGAAATTTGTCTATTTTTACACCGAGTGTCCAACCTTTTGACATATGTGACCTCGTCGTCTCTAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | CGTCATGAGCTGCTGAGGCCTAGTCTGCAGGGAAGAGCACCCCACCCCTGCCCCTGGCCCTCGGGTCCGTaGGGAGTGGCGTCGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHELLRPSLQGRAPHPCPWPSGP*GVASRQ Trigger: CTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCA...GGGGCAGGGGTGGGGTGCTCTTCCCTGCAGACTAGGCCTCAGCAGCTCATGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGCGGGTCCGTGGGGAGTaGCGTCGAGGCAGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTRVRGE*RRGRCP Trigger: TGGGCACCTGCCTCGACGCCACTCCCCACGGACCCG...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | CGTCATGAGCTGCTGAGGCCTAGTCTGCAGGGAAGAGCACCCCACCCCTGCCCCGGTCCAACTTCCTTTTaGCCGGCAGCCGGCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHELLRPSLQGRAPHPCPGPTSF*PAAGLR Trigger: CCGCAGGCCGGCTGCCGGCCAAAAGGAAGTTGGACC...GGGGCAGGGGTGGGGTGCTCTTCCCTGCAGACTAGGCCTCAGCAGCTCATGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGGCTCCCTGAGGGTAGGTGGAAGGCCTCTCAGACCCCGTCACCCCTGCTTGGCAGGACTGTCTaGCTCCTGCCCCTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRLPEGRWKASQTPSPLLGRTV*LLPLLW Trigger: CCAGAGGAGGGGCAGGAGCCAGACAGTCCTGCCAAG...CAGGGGTGACGGGGTCTGAGAGGCCTTCCACCTACCCTCAGGGAGCCTGGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | CGTCATGAGCTGCTGAGGCCTAGTCTGCAGGGAAGAGCACCCCACCCCTGCCCCGTTGGCCGCCAGGATTaGGGACAGGAACTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHELLRPSLQGRAPHPCPVGRQD*GQELVL Trigger: GAGGACCAGTTCCTGTCCCCAATCCTGGCGGCCAAC...GGGGCAGGGGTGGGGTGCTCTTCCCTGCAGACTAGGCCTCAGCAGCTCATGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR TCA 90 bp | CGTCATGAGCTGCTGAGGCCTAGTCTGCAGGGAAGAGCACCCCACCCCTGCCCCAGTCGAAGAGGTCACTaGTGCCTTCCCCCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHELLRPSLQGRAPHPCPSRRGH*CLPPRP Trigger: TGGACGAGGGGGAAGGCATCAGTGACCTCTTCGACT...GGGGCAGGGGTGGGGTGCTCTTCCCTGCAGACTAGGCCTCAGCAGCTCATGACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGTCCCAGAGTCAGTGCTaGAGCCCGGCTGAGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTSQSQC*SPAERS Trigger: ACTGCGCTCAGCCGGGCTGCAGCACTGACTCTGGGA...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGCCAGACCTGTAGCCACCACGGTCCCTGAAGAGCCTTGTGGGAGAAGACAGCCGGCCTGCGGGTaGACATCGCACAATTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLARPVATTVPEEPCGRRQPACG*TSHNLA Trigger: GGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCTG...TCTTCTCCCACAAGGCTCTTCAGGGACCGTGGTGGCTACAGGTCTGGCCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | TGGGTACACCTCTCTGGACACGTGGCCTTGGTTAAGCCCATTCTCCATGCCTGGGGACTGTCTGGCTCCTaGCCCTCCTCTGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WVHLSGHVALVKPILHAWGLSGS*PSSGHR Trigger: CCTGTGCCCAGAGGAGGGGCAGGAGCCAGACAGTCC...CCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCCAGACCTGTAGCCACCACGGTCCCTGAAGAGCCTTGTGGGAGAAGATCTGTGGTGGGGCCTTaGCCGCAATCACTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLARPVATTVPEEPCGRRSVVGP*PQSLSA Trigger: AGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGA...TCTTCTCCCACAAGGCTCTTCAGGGACCGTGGTGGCTACAGGTCTGGCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | TTAAGCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGTGCCCCAACTGCTGCTaGCTGGAGGGTCGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPFSMPGKARKKSGLLPCPNCC*LEGRVG Trigger: CCCCACCCGACCCTCCAGGCAGCAGCAGTTGGGGCA...CGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGCTTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CAA 72 bp | CGTCACCCCTGGGTACACCTCTCTGGACACGTGGCCTaGGTTAAGCCCATTCTCCATGCCTGGAAAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RHPWVHLSGHVA*VKPILHAWKGE Trigger: CTCGCCTTTCCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | TTAAGCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGGGCAGAGCTGGGGGCTaGTCAGACCCGAAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSPFSMPGKARKKSGLLPGRAGG*SDPKAT Trigger: TGTGGCCTTCGGGTCTGAGCAGCCCCCAGCTCTGCC...CGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | TTAAGCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGTGGCGTCGAGGCAGGTaGCCAGCGCCACAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPFSMPGKARKKSGLLPWRRGR*PAPQRK Trigger: CTTCCTCTGTGGCGCTGGGCACCTGCCTCGACGCCA...CGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCTCTTCTCGCTAAGCCAAGCTCTCCTCCACCCAGAGCCCAAGGCACAGACCGCAATCACTGTCTaGTCCTTGAAGTTGCCTACG | + |
|
Preference number: 4 (lower is better) Translates to: AALFSLSQALLHPEPKAQTAITV*SLKLPT Trigger: CGTAGGCAACTTCAAGGAGCAGACAGTGATTGCGGT...CTGTGCCTTGGGCTCTGGGTGGAGGAGAGCTTGGCTTAGCGAGAAGAGGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCCACCCAGAGCCCAAGGCACAGAGGTCAGATATCTCTGTTGGCGCACAGGATGCACTTCCCCTTaGGGGTCCGGAATTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPPPRAQGTEVRYLCWRTGCTSP*GSGIQG Trigger: TCCCTGAATTCCGGACCCCCAAGGGGAAGTGCATCC...TGTGCGCCAACAGAGATATCTGACCTCTGTGCCTTGGGCTCTGGGTGGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | AAACCCAGGCTCCCTGAGGGTAGGTGGAAGGCCTCTCAGACCCCGTCACCCCTGATTGGGGACAGGAACTaGTCCTCAGTCTGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPRLPEGRWKASQTPSPLIGDRN*SSVCCR Trigger: TCTACAACAGACTGAGGACCAGTTCCTGTCCCCAAT...CAGGGGTGACGGGGTCTGAGAGGCCTTCCACCTACCCTCAGGGAGCCTGGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR TCA 90 bp | TGGGTACACCTCTCTGGACACGTGGCCTTGGTTAAGCCCATTCTCCATGCCTGGGGGAGCAACTCTGAATaGGCTGGTCCAAGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVHLSGHVALVKPILHAWGSNSE*AGPRSA Trigger: AGCAGACCTTGGACCAGCTCATTCAGAGTTGCTCCC...CCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR TCA 90 bp | TGGGTACACCTCTCTGGACACGTGGCCTTGGTTAAGCCCATTCTCCATGCCTGGTCACTGTCTGCTCCTTaGAGTTGCCTACGGCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVHLSGHVALVKPILHAWSLSAP*SCLRHG Trigger: TCCGTGCCGTAGGCAACTTCAAGGAGCAGACAGTGA...CCAGGCATGGAGAATGGGCTTAACCAAGGCCACGTGTCCAGAGAGGTGTACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTATCTTCAAAATGATCAAACCCCACAAGACTGCATATTTCCTAGGAGCAGGTGGTGGCGGTGGTaGCCGGGCAGAGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRYLQNDQTPQDCIFPRSRWWRW*PGRAGG Trigger: GCCCCCAGCTCTGCCCGGCCACCACCGCCACCACCT...GCTCCTAGGAAATATGCAGTCTTGTGGGGTTTGATCATTTTGAAGATACCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | TTAAGCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGCTTCCCCCTCGTCCATaGCCCACAGGTATTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPFSMPGKARKKSGLLPLPPRP*PTGIRP Trigger: AGGACGAATACCTGTGGGGCATGGACGAGGGGGAAG...CGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGCTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAACCAGCATGTTGTCAGTaGCTTCCAAGGGGACGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKPACCQ*LPRGRG Trigger: CCCTCGTCCCCTTGGAAGCCACTGACAACATGCTGG...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CAA 72 bp | GGTGAGTCGCTGACCACTCCTCGGACAGGACTAAGTTaGTGGCACCAGGAAGCTGACTCGAGGATAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GESLTTPRTGLS*WHQEADSRIRQ Trigger: TTGTCTTATCCTCGAGTCAGCTTCCTGGTGCCACAAACTTAGTCCTGTCCGAGGAGTGGTCAGCGACTCACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | CCCAGGTATCTTCAAAATGATCAAACCCCACAAGACTGCATATTTCCTAGGAGCCGATCCCAGAGTCAGTaGTGCAGCCCGGCTGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRYLQNDQTPQDCIFPRSRSQSQ*CSPAER Trigger: GCGCTCAGCCGGGCTGCAGCACTGACTCTGGGATCG...GCTCCTAGGAAATATGCAGTCTTGTGGGGTTTGATCATTTTGAAGATACCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGGAGTCCCCAGGGATGTGGCCGGGCAGAGCTaGGGGCTGCTCAGACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKPIYKFNSAKCSGVPRDVAGQS*GLLRPE Trigger: TTCGGGTCTGAGCAGCCCCCAGCTCTGCCCGGCCAC...ATCCCTGGGGACTCCAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR TCA 90 bp | TACATTGGGAGGCTCAGGAAAGATAAGACATCCAATAGGAAGCCAGCCCCCTTGCTTCGGTCAGGTGCTTaGAGCTCAGGGAGCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIGRLRKDKTSNRKPAPLLRSGA*SSGSNS Trigger: AGAGTTGCTCCCTGAGCTTCAAGCACCTGACCGAAG...CAAGGGGGCTGGCTTCCTATTGGATGTCTTATCTTTCCTGAGCCTCCCAATGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGGAGTCCCCAGGGATGCGAAGTGTAGTAGGTaGTGGCGGTGGTGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPIYKFNSAKCSGVPRDAKCSR*WRWWPG Trigger: GCCCGGCCACCACCGCCACCACCTACTACACTTCGC...ATCCCTGGGGACTCCAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | CCCAGGTATCTTCAAAATGATCAAACCCCACAAGACTGCATATTTCCTAGGAGCAACCATCCACGCGGATaGACTTCCCCTTGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRYLQNDQTPQDCIFPRSNHPRG*TSPWGS Trigger: GGACCCCCAAGGGGAAGTGCATCCGCGTGGATGGTT...GCTCCTAGGAAATATGCAGTCTTGTGGGGTTTGATCATTTTGAAGATACCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAATTATCTTCGGTCAGGTaGTTGAAGCTCAGGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKLSSVR*LKLREQ Trigger: TTGCTCCCTGAGCTTCAAGCACCTGACCGAAGATAA...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGGAGTCCCCAGGGATGCACATCGCACAATTTaGCCCTCGGGTCCGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKPIYKFNSAKCSGVPRDAHRTI*PSGPWG Trigger: TCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGC...ATCCCTGGGGACTCCAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | TACATTGGGAGGCTCAGGAAAGATAAGACATCCAATAGGAAGCCAGCCCCCTTGTTCCAATCTTGTCTGTaGTGGGGCCTTGACCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YIGRLRKDKTSNRKPAPLFQSCL*WGLDRN Trigger: ATTGCGGTCAAGGCCCCACCACAGACAAGATTGGAA...CAAGGGGGCTGGCTTCCTATTGGATGTCTTATCTTTCCTGAGCCTCCCAATGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | CAAAGCCTAAGTGCAATTAATTCAAGCAAACTGGATAGTCCCCTCAAGACCCAGAGCTGGTCCAAGGTCTaGTCGGCATTCATCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLSAINSSKLDSPLKTQSWSKV*SAFISS Trigger: GGAGCTGATGAATGCCGAGCAGACCTTGGACCAGCT...CTGGGTCTTGAGGGGACTATCCAGTTTGCTTGAATTAATTGCACTTAGGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR TCA 90 bp | TCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGGAGTCCCCAGGGATTGGACTTCTTGCGGATaGGCTGGATACCCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKPIYKFNSAKCSGVPRDWTSCG*AGYPPA Trigger: TGCTGGAGGGTATCCAGCTCATCCGCAAGAAGTCCA...ATCCCTGGGGACTCCAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTATCTTCAAAATGATCAAACCCCACAAGACTGCATATTTCCTAGGAGCTTCTTGCGGATGAGCTaGATACCCTCCAGCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRYLQNDQTPQDCIFPRSFLRMS*IPSSTL Trigger: CAACGTGCTGGAGGGTATCCAGCTCATCCGCAAGAA...GCTCCTAGGAAATATGCAGTCTTGTGGGGTTTGATCATTTTGAAGATACCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| 3UTR CAA 72 bp | AGCACTCTAAGGAACTTAAAGAGGTCTCAAGTATCATaGGCAAGAAAGAGGTGTGAGCTTGTTCCCACGCTA | + |
|
Preference number: 4 (lower is better) Translates to: STLRNLKRSQVS*ARKRCELVPTL Trigger: TAGCGTGGGAACAAGCTCACACCTCTTTCTTGCCAATGATACTTGAGACCTCTTTAAGTTCCTTAGAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR GCA 90 bp | TTCAATGGTGCATCTCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGCTTCAAATAGTTCCCTaGCTACCCACTGGATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FNGASPSLFTSLILLNALLQIVP*LPTGCC Trigger: ACAACATCCAGTGGGTAGGCAGGGAACTATTTGAAG...CAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGAGATGCACCATTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS-3UTR CCA 90 bp | TTCAATGGTGCATCTCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGACAGGTAGACTTCAATaGGGCCTTGGGTACTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FNGASPSLFTSLILLNALTGRLQ*GLGYSL Trigger: TAAAGAGTACCCAAGGCCCCATTGAAGTCTACCTGT...CAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGAGATGCACCATTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 90 bp | AGCCGGCCTGCGGGTGCACATCGCACAATTTGGCCCTCGGGTCCGTaGGGAGTGGCGTCGAGGCAGGTGCCCAGCGCCACAGAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRPAGAHRTIWPSGP*GVASRQVPSATEEG Trigger: GCCTTCCTCTGTGGCGCTGGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS GCA 90 bp | AAGTGTAGTAGGTGGTGGCGGTGGTGGCCGGGCAGAGCTGGGGGCTaGTCAGACCCGAAGGCCACAGCTCGGTGGGGTTCAGCGCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KCSRWWRWWPGRAGG*SDPKATARWGSAPA Trigger: TGCCGGCGCTGAACCCCACCGAGCTGTGGCCTTCGGGTCTGAGCAGCCCCCAGCTCTGCCCGGCCACCACCGCCACCACCTACTACACTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 90 bp | TTCCTTTTGGCCGGCAGCCGGCCTGCGGGTGCACATCGCACAATTTaGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLAGSRPAGAHRTI*PSGPWGVASRQVPS Trigger: GCTGGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCTGCCGGCCAAAAGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 90 bp | CTGCGGGTGCACATCGCACAATTTGGCCCTCGGGTCCGTGGGGAGTaGCGTCGAGGCAGGTGCCCAGCGCCACAGAGGAAGGCACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRVHIAQFGPRVRGE*RRGRCPAPQRKAPS Trigger: AGACGGTGCCTTCCTCTGTGGCGCTGGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS GCA 90 bp | GCACAATTTGGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTaGCCAGCGCCACAGAGGAAGGCACCGTCTGCGTGTAAAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQFGPRVRGEWRRGR*PAPQRKAPSACKAK Trigger: CTTCGCTTTACACGCAGACGGTGCCTTCCTCTGTGGCGCTGGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | AAACCCAGGCTCCCTGAGGGTAGGTGGAAGGCCTCTCAGACCCCGTCACCCCTGTGCACATCGCACAATTaGGCCCTCGGGTCCGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KPRLPEGRWKASQTPSPLCTSHN*ALGSVG Trigger: CCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCA...CAGGGGTGACGGGGTCTGAGAGGCCTTCCACCTACCCTCAGGGAGCCTGGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGAGGTCCAACTTCCTTTaGGCCGGCAGCCGGCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTRSNFL*AGSRPA Trigger: CGCAGGCCGGCTGCCGGCCAAAAGGAAGTTGGACCT...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | GGCCTCTCAGACCCCGTCACCCCTGGGTACACCTCTCTGGACACGTGGCCTTGGAGTTGGCCGCCAGGATaGGGGACAGGAACTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLSDPVTPGYTSLDTWPWSWPPG*GTGTGP Trigger: AGGACCAGTTCCTGTCCCCAATCCTGGCGGCCAACT...CCAAGGCCACGTGTCCAGAGAGGTGTACCCAGGGGTGACGGGGTCTGAGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | GAAGAGCCTTGTGGGAGAAGAGACGACCTGGGTGAGGTGGGGCCTCTGGGTACGGGAGACTTGGGGGTTTaGGGGCTTGGCAAACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: EEPCGRRDDLGEVGPLGTGDLGV*GLGKPS Trigger: GGATGGTTTGCCAAGCCCCAAAACCCCCAAGTCTCC...CGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTCTTCTCCCACAAGGCTCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 90 bp | CAGTCTGTTGTAGAAGAGGGTGTGACAGCTCCAGCATGTTGTCAGTaGCTTCCAAGGGGACGAGGGATGGGGCTGGCGGCAGTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSVVEEGVTAPACCQ*LPRGRGMGLAAVVV Trigger: CACCACCACTGCCGCCAGCCCCATCCCTCGTCCCCTTGGAAGCCACTGACAACATGCTGGAGCTGTCACACCCTCTTCTACAACAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS CCA 90 bp | CTGCAGGTTCTCCTCGGCCCTGTCCGGCACTTCCAATCTTGTCTGTaGTGGGGCCTTGACCGCAATCACTGTCTGCTCCTTGAAGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQVLLGPVRHFQSCL*WGLDRNHCLLLEVA Trigger: GGCAACTTCAAGGAGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGACAAGATTGGAAGTGCCGGACAGGGCCGAGGAGAACCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | AGGCTGGCCAGACCTGTAGCCACCACGGTCCCTGAAGAGCCTTGTGGGAGAAGATCTTCGGTCAGGTGCTaGAAGCTCAGGGAGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RLARPVATTVPEEPCGRRSSVRC*KLREQL Trigger: GAGTTGCTCCCTGAGCTTCAAGCACCTGACCGAAGA...TCTTCTCCCACAAGGCTCTTCAGGGACCGTGGTGGCTACAGGTCTGGCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS CCA 90 bp | CAGGTTCTCCTCGGCCCTGTCCGGCACTTCCAATCTTGTCTGTGGTaGGGCCTTGACCGCAATCACTGTCTGCTCCTTGAAGTTGCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: QVLLGPVRHFQSCLW*GLDRNHCLLLEVAY Trigger: GTAGGCAACTTCAAGGAGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGACAAGATTGGAAGTGCCGGACAGGGCCGAGGAGAACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | TTAAGCCCATTCTCCATGCCTGGAAAGGCGAGGAAGAAAAGCGGACTCTTGCCGCGGATGCACTTCCCCTaGGGGGTCCGGAATTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPFSMPGKARKKSGLLPRMHFP*GVRNSG Trigger: CCCTGAATTCCGGACCCCCAAGGGGAAGTGCATCCG...CGGCAAGAGTCCGCTTTTCTTCCTCGCCTTTCCAGGCATGGAGAATGGGCTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | TGGGCAGAACAAGAGAGACCAAGAGCTCTTCCCAGATCCCCATGCCAGGAGAGGGACAGCTCCAGCATGTaGTCAGTGGCTTCCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WAEQERPRALPRSPCQERDSSSM*SVASKG Trigger: CCCCTTGGAAGCCACTGACAACATGCTGGAGCTGTC...CCTCTCCTGGCATGGGGATCTGGGAAGAGCTCTTGGTCTCTCTTGTTCTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | TACATTGGGAGGCTCAGGAAAGATAAGACATCCAATAGGAAGCCAGCCCCCTTGGTCTGTGGTGGGGCCTaGACCGCAATCACTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YIGRLRKDKTSNRKPAPLVCGGA*TAITVC Trigger: GCAGACAGTGATTGCGGTCAAGGCCCCACCACAGAC...CAAGGGGGCTGGCTTCCTATTGGATGTCTTATCTTTCCTGAGCCTCCCAATGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAAGTCTGCTCCTTGAAGTaGCCTACGGCACGGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKVCSLK*PTARIS Trigger: GGATATCCGTGCCGTAGGCAACTTCAAGGAGCAGAC...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | CCAACCCAGGGACTCCAGACCTTCCCACCCCCAGGTATCTTCAAAATGATCAAAATCACTGTCTGCTCCTaGAAGTTGCCTACGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: PTQGLQTFPPPGIFKMIKITVCS*KLPTAR Trigger: CCGTGCCGTAGGCAACTTCAAGGAGCAGACAGTGAT...TTTGATCATTTTGAAGATACCTGGGGGTGGGAAGGTCTGGAGTCCCTGGGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS TCA 90 bp | TTGGCATTATCTTCGGTCAGGTGCTTGAAGCTCAGGGAGCAACTCTaGATGAGCTGGTCCAAGGTCTGCTCGGCATTCATCAGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LALSSVRCLKLREQL*MSWSKVCSAFISSF Trigger: GAAGGAGCTGATGAATGCCGAGCAGACCTTGGACCAGCTCATTCAGAGTTGCTCCCTGAGCTTCAAGCACCTGACCGAAGATAATGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | TTCAATGGTGCATCTCCAAGCCTATTTACAAGTTTAATTCTGCTAAATGCTCTGGAGGGGAGCGCCTCCTaGGCAGGACTGTCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FNGASPSLFTSLILLNALEGSAS*AGLSGS Trigger: GGAGCCAGACAGTCCTGCCAAGGAGGCGCTCCCCTC...CAGAGCATTTAGCAGAATTAAACTTGTAAATAGGCTTGGAGATGCACCATTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS-3UTR CAA 90 bp | CCCAGGTATCTTCAAAATGATCAAACCCCACAAGACTGCATATTTCCTAGGAGCCACTGGATGTTGTTTTaGGACTTCTTGCGGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRYLQNDQTPQDCIFPRSHWMLF*DFLRMS Trigger: GCTCATCCGCAAGAAGTCCAAAAACAACATCCAGTG...GCTCCTAGGAAATATGCAGTCTTGTGGGGTTTGATCATTTTGAAGATACCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS CCA 72 bp | GCCGGCAGCCGGCCTGCGGGTGCACATCGCACAATTTaGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGSRPAGAHRTI*PSGPWGVASRQ Trigger: CTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCTGCCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS CAA 72 bp | GGCCGGCAGCCGGCCTGCGGGTGCACATCGCACAATTaGGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRQPACGCTSHN*ALGSVGSGVEA Trigger: TGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCTGCCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CAA 90 bp | CTTCCTTTTGGCCGGCAGCCGGCCTGCGGGTGCACATCGCACAATTaGGCCCTCGGGTCCGTGGGGAGTGGCGTCGAGGCAGGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPFGRQPACGCTSHN*ALGSVGSGVEAGAQ Trigger: CTGGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCTGCCGGCCAAAAGGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS CCA 72 bp | GCGGGTGCACATCGCACAATTTGGCCCTCGGGTCCGTaGGGAGTGGCGTCGAGGCAGGTGCCCAGCGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: AGAHRTIWPSGP*GVASRQVPSAT Trigger: TGTGGCGCTGGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS GCA 72 bp | GTCCAACTTCCTTTTGGCCGGCAGCCGGCCTGCGGGTaGACATCGCACAATTTGGCCCTCGGGTCCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQLPFGRQPACG*TSHNLALGSVG Trigger: CCCCACGGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCTGCCGGCCAAAAGGAAGTTGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 72 bp | CACATCGCACAATTTGGCCCTCGGGTCCGTGGGGAGTaGCGTCGAGGCAGGTGCCCAGCGCCACAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HIAQFGPRVRGE*RRGRCPAPQRK Trigger: CTTCCTCTGTGGCGCTGGGCACCTGCCTCGACGCCACTCCCCACGGACCCGAGGGCCAAATTGTGCGATGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS GCA 72 bp | CTCCAGGTCCAACTTCCTTTTGGCCGGCAGCCGGCCTaGGGGTGCACATCGCACAATTTGGCCCTCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQVQLPFGRQPA*GCTSHNLALGS Trigger: GGACCCGAGGGCCAAATTGTGCGATGTGCACCCGCAGGCCGGCTGCCGGCCAAAAGGAAGTTGGACCTGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 72 bp | AAGGCACCGTCTGCGTGTAAAGCGAAGTGTAGTAGGTaGTGGCGGTGGTGGCCGGGCAGAGCTGGGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KAPSACKAKCSR*WRWWPGRAGGC Trigger: GCAGCCCCCAGCTCTGCCCGGCCACCACCGCCACCACCTACTACACTTCGCTTTACACGCAGACGGTGCCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CAA 72 bp | GTAGGCCTCCCAATGCCCTCCAGGTCCAACTTCCTTTaGGCCGGCAGCCGGCCTGCGGGTGCACATCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: VGLPMPSRSNFL*AGSRPAGAHRT Trigger: TGTGCGATGTGCACCCGCAGGCCGGCTGCCGGCCAAAAGGAAGTTGGACCTGGAGGGCATTGGGAGGCCTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CAA 90 bp | TCCTCGGCCCTGTCCGGCACTTCCAATCTTGTCTGTGGTGGGGCCTaGACCGCAATCACTGTCTGCTCCTTGAAGTTGCCTACGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SSALSGTSNLVCGGA*TAITVCSLKLPTAR Trigger: CCGTGCCGTAGGCAACTTCAAGGAGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGACAAGATTGGAAGTGCCGGACAGGGCCGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 72 bp | CTCCTCGGCCCTGTCCGGCACTTCCAATCTTGTCTGTaGTGGGGCCTTGACCGCAATCACTGTCTGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLGPVRHFQSCL*WGLDRNHCLLL Trigger: AAGGAGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGACAAGATTGGAAGTGCCGGACAGGGCCGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CAA 90 bp | TGGTCCTCAGTCTGTTGTAGAAGAGGGTGTGACAGCTCCAGCATGTaGTCAGTGGCTTCCAAGGGGACGAGGGATGGGGCTGGCGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WSSVCCRRGCDSSSM*SVASKGTRDGAGGS Trigger: ACTGCCGCCAGCCCCATCCCTCGTCCCCTTGGAAGCCACTGACAACATGCTGGAGCTGTCACACCCTCTTCTACAACAGACTGAGGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CCA 72 bp | CTCGGCCCTGTCCGGCACTTCCAATCTTGTCTGTGGTaGGGCCTTGACCGCAATCACTGTCTGCTCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGPVRHFQSCLW*GLDRNHCLLLE Trigger: TTCAAGGAGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGACAAGATTGGAAGTGCCGGACAGGGCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS GCA 72 bp | CTTGTCTGTGGTGGGGCCTTGACCGCAATCACTGTCTaGTCCTTGAAGTTGCCTACGGCACGGATATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVCGGALTAITV*SLKLPTARISW Trigger: CCAGGATATCCGTGCCGTAGGCAACTTCAAGGAGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
||
| CDS CAA 72 bp | GTCTGTTGTAGAAGAGGGTGTGACAGCTCCAGCATGTaGTCAGTGGCTTCCAAGGGGACGAGGGATGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VCCRRGCDSSSM*SVASKGTRDGA Trigger: AGCCCCATCCCTCGTCCCCTTGGAAGCCACTGACAACATGCTGGAGCTGTCACACCCTCTTCTACAACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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| CDS CAA 72 bp | CTGTCCGGCACTTCCAATCTTGTCTGTGGTGGGGCCTaGACCGCAATCACTGTCTGCTCCTTGAAGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSGTSNLVCGGA*TAITVCSLKLP Trigger: AGGCAACTTCAAGGAGCAGACAGTGATTGCGGTCAAGGCCCCACCACAGACAAGATTGGAAGTGCCGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061721.6 |
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