Pregenerated sensors for E2F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027490Ensembl transcript IDs: ENSMUST00000000894.6, ENSMUST00000103145.11
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTGCTGCCCTGCAAACCCAGCCAGGCAAGCTGTACCACCCGGCCTaGCTGACACACAGGATTCTGAAAGCAGGCAGCCACCCTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LAALQTQPGKLYHPA*LTHRILKAGSHPGP Trigger: AGGCCCAGGGTGGCTGCCTGCTTTCAGAATCCTGTGTGTCAGCCAGGCCGGGTGGTACAGCTTGCCTGGCTGGGTTTGCAGGGCAGCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR GCA 90 bp | TCCAATGAGGCAGGAAGGATGGCCCAGGGCAGGAGGCTCCAAAGCTaGAGACAGGTGGGCATCTCCAGACACCCTGAATCCCTAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: SNEAGRMAQGRRLQS*RQVGISRHPESLGF Trigger: GAAGCCTAGGGATTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTGGGCCATCCTTCCTGCCTCATTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 90 bp | GGGACAGAGGGTATGGATCGTGCTATTCCAATGAGGCAGGAAGGATaGCCCAGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCT | + |
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Preference number: 1 (lower is better) Translates to: GTEGMDRAIPMRQEG*PRAGGSKAADRWAS Trigger: AGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTGGGCCATCCTTCCTGCCTCATTGGAATAGCACGATCCATACCCTCTGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR GCA 90 bp | CCAAGGCCCTCACGTACCCTCCCCATCTCAGATCCCCTGGATACATaGGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCATC | + |
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Preference number: 1 (lower is better) Translates to: PRPSRTLPISDPLDT*GWSTGTKGLFLQPI Trigger: GATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGAGGGCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 90 bp | GCAGTCAGCCAAGGCCCTCACGTACCCTCCCCATCTCAGATCCCCTaGATACATGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: AVSQGPHVPSPSQIP*IHAAGVLVQRDCFS Trigger: GGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGAGGGCCTTGGCTGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 90 bp | TACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTaGTACAAAGGGACTGTTTCTCCAGCCCATCCATGGCTGTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: YPPHLRSPGYMRLEY*YKGTVSPAHPWLSV Trigger: GACTGACAGCCATGGATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 90 bp | GGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGGGTaGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCAT | + |
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Preference number: 1 (lower is better) Translates to: GNRTVRKQIKVQTGG*GGQQRSTPAIGRTH Trigger: ATGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 90 bp | GTCTGCTCAATGTGGCAGCAACCAAACCCCAGAGCTAGAAGCTATTaGGACAGAGGGTATGGATCGTGCTATTCCAATGAGGCAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VCSMWQQPNPRARSY*DRGYGSCYSNEAGR Trigger: CCTTCCTGCCTCATTGGAATAGCACGATCCATACCCTCTGTCCCAATAGCTTCTAGCTCTGGGGTTTGGTTGCTGCCACATTGAGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR GCA 90 bp | AAATCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTaGAGACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: KSKQEGTELLGNKSK*RLEGGEDSRGALQP Trigger: TGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | GCATACCCACCCCTCCTGGCCGCAGTCAGCCAAGGCCCTCACGTACCCTCCCCAACCCCAGGCACACAGTaGGCAGTGTGGGGTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: AYPPLLAAVSQGPHVPSPTPGTQ*AVWGAC Trigger: GCATGCACCCCACACTGCGCACTGTGTGCCTGGGGT...TGGGGAGGGTACGTGAGGGCCTTGGCTGACTGCGGCCAGGAGGGGTGGGTATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | GCATACCCACCCCTCCTGGCCGCAGTCAGCCAAGGCCCTCACGTACCCTCCCCAAAGCAGTGCTCTTGCTaGCCTGCAAACCCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AYPPLLAAVSQGPHVPSPKQCSC*PANPAR Trigger: CCTGGCTGGGTTTGCAGGGCAGCAAGAGCACTGCTT...TGGGGAGGGTACGTGAGGGCCTTGGCTGACTGCGGCCAGGAGGGGTGGGTATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCAATGAGGCAGGAAGGATaGCCCAGGGCAGGAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: DWRVGRTAEEHSSHRKDAMRQEG*PRAGGS Trigger: GGAGCCTCCTGCCCTGGGCCATCCTTCCTGCCTCAT...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCCACCGTGCGCAGTGTGGGGTaGATGCACACACACTGTACA | + |
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Preference number: 2 (lower is better) Translates to: GPHRAPAARTPKVQLEPTVRSVG*MHTHCT Trigger: TGTACAGTGTGTGTGCATGCACCCCACACTGCGCAC...GGTGGGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCAACCCCAGGCACACAGTaGGCAGTGTGGGGTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: PWIHAAGVLVQRDCFSSPTPGTQ*AVWGAC Trigger: GCATGCACCCCACACTGCGCACTGTGTGCCTGGGGT...TGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCAGCAGTGTGGGGTGCATaGACACACACTGTACAACAT | + |
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Preference number: 2 (lower is better) Translates to: DWRVGRTAEEHSSHRKDAAVWGA*THTVQH Trigger: ATGTTGTACAGTGTGTGTGCATGCACCCCACACTGC...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCAAAGCAGTGCTCTTGCTaGCCTGCAAACCCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PWIHAAGVLVQRDCFSSPKQCSC*PANPAR Trigger: CCTGGCTGGGTTTGCAGGGCAGCAAGAGCACTGCTT...TGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTTCTCCAGCCCATCCATaGCTGTCAGTCTGTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SRTLPISDPLDTCGWSTGSPAHP*LSVCLP Trigger: AGGGAGACAGACTGACAGCCATGGATGGGCTGGAGA...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGAGCAGGCAGCCACCCTaGGCCTCACAGGGCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SKQEGTELLGNKSKCRLESRQPP*ASQGPC Trigger: GCAGGGGCCCTGTGAGGCCCAGGGTGGCTGCCTGCT...CTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCAACCAAACCCCAGAGCTAGAAGCTATTGGGACAGAGGGTATGGATCGAAAGCTGCAGACAGGTaGGCATCTCCAGACACCCTG | + |
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Preference number: 2 (lower is better) Translates to: WQQPNPRARSYWDRGYGSKAADR*ASPDTL Trigger: CAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTT...CGATCCATACCCTCTGTCCCAATAGCTTCTAGCTCTGGGGTTTGGTTGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTATCCATGCACACATGTaGACACACCAGGATGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SRTLPISDPLDTCGWSTGIHAHM*THQDVS Trigger: AGACACATCCTGGTGTGTCCACATGTGTGCATGGAT...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCACTTCCCATTTTGGTCTaGTCAATGTGGCAGCAACCA | + |
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Preference number: 2 (lower is better) Translates to: PWIHAAGVLVQRDCFSSPLPILV*SMWQQP Trigger: TGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAG...TGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGATTAAGGTATCACCCATaGCCCCCACCCTTTGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LPISDPLDTCGWSTGTKGLRYHP*PPPFAY Trigger: ATAAGCAAAGGGTGGGGGGCATGGGTGATACCTTAA...TCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCATTAAGGTATCACCCATaGCCCCCACCCTTTGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: PWIHAAGVLVQRDCFSSPLRYHP*PPPFAY Trigger: ATAAGCAAAGGGTGGGGGGCATGGGTGATACCTTAA...TGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCACACATACAGATGTGTTCACCTTCATTCCCGGGCACACGTGCACATACCTTCCCATTTTGGTCTaGTCAATGTGGCAGCAACCA | + |
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Preference number: 2 (lower is better) Translates to: CSTHTDVFTFIPGHTCTYLPILV*SMWQQP Trigger: TGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAG...GTATGTGCACGTGTGCCCGGGAATGAAGGTGAACACATCTGTATGTGTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCACACATACAGATGTGTTCACCTTCATTCCCGGGCACACGTGCACATACACATCCTTCCCATTTTaGTCTGCTCAATGTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSTHTDVFTFIPGHTCTYTSFPF*SAQCGS Trigger: GCTGCCACATTGAGCAGACCAAAATGGGAAGGATGT...GTATGTGCACGTGTGCCCGGGAATGAAGGTGAACACATCTGTATGTGTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | GGGTTACAAACTGAAAGGAAATTAAGTCAGATAGGAAGAGGGAGTGAACATTCCGTGCAGACTGGAGGGTaGGGAGGACAGCAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GLQTERKLSQIGRGSEHSVQTGG*GGQQRS Trigger: GCTCCTCTGCTGTCCTCCCCACCCTCCAGTCTGCAC...GGAATGTTCACTCCCTCTTCCTATCTGACTTAATTTCCTTTCAGTTTGTAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGGTGCGCAGTGTGGGGTaGATGCACACACACTGTACA | + |
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Preference number: 2 (lower is better) Translates to: SKQEGTELLGNKSKCRLEVRSVG*MHTHCT Trigger: TGTACAGTGTGTGTGCATGCACCCCACACTGCGCAC...CTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | GGGTTACAAACTGAAAGGAAATTAAGTCAGATAGGAAGAGGGAGTGAACATTCCGTGCTCTTGCTGCCCTaGAAACCCAGCCAGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GLQTERKLSQIGRGSEHSVLLLP*KPSQAS Trigger: GCTTGCCTGGCTGGGTTTGCAGGGCAGCAAGAGCAC...GGAATGTTCACTCCCTCTTCCTATCTGACTTAATTTCCTTTCAGTTTGTAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAAGGAAATTAAGTCAGATAGGAAGAGGGAGTGAACATTCCCTCCAACACAAAGCTGCAGACAGGTaGGCATCTCCAGACACCCTG | + |
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Preference number: 2 (lower is better) Translates to: TERKLSQIGRGSEHSLQHKAADR*ASPDTL Trigger: CAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTT...GTGTTGGAGGGAATGTTCACTCCCTCTTCCTATCTGACTTAATTTCCTTTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| 3UTR-3UTR GCA 90 bp | GGGTTACAAACTGAAAGGAAATTAAGTCAGATAGGAAGAGGGAGTGAACATTCCGATCCCCTGGATACATaGGGCTGGAGTACTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: GLQTERKLSQIGRGSEHSDPLDT*GWSTGT Trigger: TGTACCAGTACTCCAGCCGCATGTATCCAGGGGATC...GGAATGTTCACTCCCTCTTCCTATCTGACTTAATTTCCTTTCAGTTTGTAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGACATCCTTCCCATTTTaGTCTGCTCAATGTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SKQEGTELLGNKSKCRLETSFPF*SAQCGS Trigger: GCTGCCACATTGAGCAGACCAAAATGGGAAGGATGT...CTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR GCA 72 bp | GCAGGAAGGATGGCCCAGGGCAGGAGGCTCCAAAGCTaGAGACAGGTGGGCATCTCCAGACACCCTGAATCC | + |
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Preference number: 3 (lower is better) Translates to: AGRMAQGRRLQS*RQVGISRHPES Trigger: GGATTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTGGGCCATCCTTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 72 bp | CTGCAAACCCAGCCAGGCAAGCTGTACCACCCGGCCTaGCTGACACACAGGATTCTGAAAGCAGGCAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LQTQPGKLYHPA*LTHRILKAGSH Trigger: GTGGCTGCCTGCTTTCAGAATCCTGTGTGTCAGCCAGGCCGGGTGGTACAGCTTGCCTGGCTGGGTTTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 72 bp | CAAGGCCCTCACGTACCCTCCCCATCTCAGATCCCCTaGATACATGCGGCTGGAGTACTGGTACAAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QGPHVPSPSQIP*IHAAGVLVQRD Trigger: GTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGAGGGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR GCA 72 bp | AGCTTCGATCGGAAAACTTTTAAGCAGTGCTCTTGCTaGCCTGCAAACCCAGCCAGGCAAGCTGTACCACCC | + |
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Preference number: 3 (lower is better) Translates to: SFDRKTFKQCSC*PANPARQAVPP Trigger: GGGTGGTACAGCTTGCCTGGCTGGGTTTGCAGGGCAGCAAGAGCACTGCTTAAAAGTTTTCCGATCGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR GCA 72 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATaGGGCTGGAGTACTGGTACAAAGGGACTGTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SRTLPISDPLDT*GWSTGTKGLFL Trigger: GAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 72 bp | CATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTaGTACAAAGGGACTGTTTCTCCAGCCCATCCATGG | + |
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Preference number: 3 (lower is better) Translates to: HLRSPGYMRLEY*YKGTVSPAHPW Trigger: CCATGGATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 72 bp | ATGTGGCAGCAACCAAACCCCAGAGCTAGAAGCTATTaGGACAGAGGGTATGGATCGTGCTATTCCAATGAG | + |
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Preference number: 3 (lower is better) Translates to: MWQQPNPRARSY*DRGYGSCYSNE Trigger: CTCATTGGAATAGCACGATCCATACCCTCTGTCCCAATAGCTTCTAGCTCTGGGGTTTGGTTGCTGCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CCA 72 bp | TGCATGCACACACACTGTACAACATCCTTCCCATTTTaGTCTGCTCAATGTGGCAGCAACCAAACCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CMHTHCTTSFPF*SAQCGSNQTPE Trigger: CTCTGGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGTACAGTGTGTGTGCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR GCA 72 bp | CATACAGATGTGTTCACCTTCATTCCCGGGCACACGTaGACATACACATACATACACACACACACACACACA | + |
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Preference number: 3 (lower is better) Translates to: HTDVFTFIPGHT*TYTYIHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTATGTATGTGTATGTGCACGTGTGCCCGGGAATGAAGGTGAACACATCTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR GCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCACTGGGTGGCGGCCTCTaGCCCGGAATGGCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: DWRVGRTAEEHSSHRKDALGGGL*PGMAHC Trigger: GCAGTGGGCCATTCCGGGGCAGAGGCCGCCACCCAG...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR TCA 90 bp | GCATACCCACCCCTCCTGGCCGCAGTCAGCCAAGGCCCTCACGTACCCTCCCCAAACATGCTCCAGGAGTaGGTCAGCAGCCACCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AYPPLLAAVSQGPHVPSPNMLQE*VSSHQW Trigger: CCACTGGTGGCTGCTGACTCACTCCTGGAGCATGTT...TGGGGAGGGTACGTGAGGGCCTTGGCTGACTGCGGCCAGGAGGGGTGGGTATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CCA 90 bp | GCATACCCACCCCTCCTGGCCGCAGTCAGCCAAGGCCCTCACGTACCCTCCCCATCCACAGCTTGTAGTTaGGTCTCAGGAGGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AYPPLLAAVSQGPHVPSPSTACS*VSGGAL Trigger: CAAGGCCCCTCCTGAGACCCAACTACAAGCTGTGGA...TGGGGAGGGTACGTGAGGGCCTTGGCTGACTGCGGCCAGGAGGGGTGGGTATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CCA 90 bp | TGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCATCCATGGCTGTAATCGCGAGGGCCAGTaGGCGGCGCGGCGGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: CGWSTGTKGLFLQPIHGCNREGQ*AARRGA Trigger: AGCTCCCCGCCGCGCCGCCCACTGGCCCTCGCGATT...ACAGCCATGGATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| CDS-3UTR CCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTGGGGCGCCTGCGGCGTaGCGAAGAGCAGCACGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SRTLPISDPLDTCGWSTGGAPAA*RRAARQ Trigger: CTGACGTGCTGCTCTTCGCCACGCCGCAGGCGCCCC...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| CDS-3UTR TCA 90 bp | GGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCCACCAACGACACCGTCAGCTaGGCGGCTCAGCAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPHRAPAARTPKVQLEPTNDTVS*AAQQLQ Trigger: TTGGAGCTGCTGAGCCGCTCAGCTGACGGTGTCGTT...GGTGGGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | GCATACCCACCCCTCCTGGCCGCAGTCAGCCAAGGCCCTCACGTACCCTCCCCACCACCATGGTGTGGCTaGCTAGCCACTGGATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AYPPLLAAVSQGPHVPSPPPWCG*LATGYD Trigger: ATCATATCCAGTGGCTAGGCAGCCACACCATGGTGG...TGGGGAGGGTACGTGAGGGCCTTGGCTGACTGCGGCCAGGAGGGGTGGGTATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTGGATGTGGAGGGAGGTaGTGGTGGAGGCCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTLPISDPLDTCGWSTGGCGGR*WWRPCW Trigger: CCAGCAGGGCCTCCACCATCACCTCCCTCCACATCC...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCATGCTGCTCACTCTCCTaGAGTTGCTGCAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DWRVGRTAEEHSSHRKDACCSLS*SCCRSW Trigger: CCAGGACCTGCAGCAACTGCAGGAGAGTGAGCAGCA...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | CCCTGGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCTGCTGCTCACTCTCCTaGAGTTGCTGCAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWASQGPCSKDTKSAVRACCSLS*SCCRSW Trigger: CCAGGACCTGCAGCAACTGCAGGAGAGTGAGCAGCA...GGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | GCATACCCACCCCTCCTGGCCGCAGTCAGCCAAGGCCCTCACGTACCCTCCCCATCCTCCGAAAGCAGTTaGAGCTGTGTGGTACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AYPPLLAAVSQGPHVPSPSSESS*SCVVQM Trigger: CATCTGTACCACACAGCTGCAACTGCTTTCGGAGGA...TGGGGAGGGTACGTGAGGGCCTTGGCTGACTGCGGCCAGGAGGGGTGGGTATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAATTTTCACACCTTTCCCTaGGTGGCGGCCTCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSKAADRWASPDTLNFHTFP*VAASAP Trigger: CGGGGCAGAGGCCGCCACCCAGGGAAAGGTGTGAAA...ATTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | GGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCCACCTGGACTTCTTGGCAATaGGCTGGATGCCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPHRAPAARTPKVQLEPTWTSWQ*AGCPPG Trigger: TCCTGGAGGGCATCCAGCTCATTGCCAAGAAGTCCA...GGTGGGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCATGGACTTCTTGGCAATaGGCTGGATGCCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DWRVGRTAEEHSSHRKDAWTSWQ*AGCPPG Trigger: TCCTGGAGGGCATCCAGCTCATTGCCAAGAAGTCCA...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | TGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCATCCATGGCTGTGGATGTGGAGGGAGGTaGTGGTGGAGGCCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGWSTGTKGLFLQPIHGCGCGGR*WWRPCW Trigger: CCAGCAGGGCCTCCACCATCACCTCCCTCCACATCC...ACAGCCATGGATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAACAGGGTCTGCAATGCTaGGAAGGTCCTGGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGRRLQSCRQVGISRHPEQGLQC*EGPGRS Trigger: TGACCTGCCAGGACCTTCGCAGCATTGCAGACCCTG...TTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTCTGCAGGGTCTGCAATaGTGCGAAGGTCCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTLPISDPLDTCGWSTGLQGLQ*CEGPGR Trigger: CCTGCCAGGACCTTCGCAGCATTGCAGACCCTGCAG...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCAGGCAATACTGCTTCTTaGTCCAGGCCCAACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DWRVGRTAEEHSSHRKDAGNTAS*SRPNRD Trigger: ATCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCC...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | GGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCCACCCATCCGTGGCAATACTaGTTCTTGCTCCAGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPHRAPAARTPKVQLEPTHPWQY*FLLQAQ Trigger: TTGGGCCTGGAGCAAGAAGCAGTATTGCCACGGATG...GGTGGGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | ATGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCATCCATGGCTGTTTCACACCTTTCCCTaGGTGGCGGCCTCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MRLEYWYKGTVSPAHPWLFHTFP*VAASAP Trigger: CGGGGCAGAGGCCGCCACCCAGGGAAAGGTGTGAAA...CAGCCATGGATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAAATCCCCACCATGGTGTaGCTGCCTAGCCACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: QGRRLQSCRQVGISRHPEIPTMV*LPSHWI Trigger: TATCCAGTGGCTAGGCAGCCACACCATGGTGGGGAT...TTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAACAGGTGGCCCATCCGTaGCAATACTGCTTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGRRLQSCRQVGISRHPEQVAHP*QYCFLL Trigger: GAGCAAGAAGCAGTATTGCCACGGATGGGCCACCTG...TTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAATATCAGCCCCACCATCTaGAGCTGCGTGAAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSKAADRWASPDTLNISPTI*SCVKHF Trigger: GAAGTGCTTCACGCAGCTGCAGATGGTGGGGCTGAT...ATTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000894.6 |
||
| CDS-3UTR GCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTTCACTCTCCTGCAGTTaGTGCAGGTCCTGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTLPISDPLDTCGWSTGSLSCS*CRSWVR Trigger: CCTGACCCAGGACCTGCAGCAACTGCAGGAGAGTGA...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCGCAGTTGCAGCTGTGTaGTACAGATGTGCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PWASQGPCSKDTKSAVRAAVAAV*YRCASG Trigger: ACCTGATGCACATCTGTACCACACAGCTGCAACTGC...GGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTGGATGTCTCCTGGCATaGGGTCTTCCCAGGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLPISDPLDTCGWSTGGCLLA*GLPRAN Trigger: ATTAGCCCTGGGAAGACCTCATGCCAGGAGACATCC...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAATATGACCATCTGTTCTaGAGGGTCTGCAATGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QGRRLQSCRQVGISRHPEYDHLF*RVCNAA Trigger: CGCAGCATTGCAGACCCTGCAGAACAGATGGTCATA...TTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCAGCTCCAAGAAGCGTTTaGTGGTCAGATTTAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DWRVGRTAEEHSSHRKDAAPRSV*WSDLVR Trigger: CCTCACTAAATCTGACCACCAAACGCTTCTTGGAGC...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAATACCAGTGGTGACAGTTaGTCCTCTTCCATAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSKAADRWASPDTLNTSGDS*SSSIGT Trigger: GGTCCCTATGGAAGAGGACCAACTGTCACCACTGGT...ATTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | TGCAGCACACATACAGATGTGTTCACCTTCATTCCCGGGCACACGTGCACATACAACGACACCGTCAGCTaGGCGGCTCAGCAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSTHTDVFTFIPGHTCTYNDTVS*AAQQLQ Trigger: TTGGAGCTGCTGAGCCGCTCAGCTGACGGTGTCGTT...GTATGTGCACGTGTGCCCGGGAATGAAGGTGAACACATCTGTATGTGTGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGCTGGGTGGCGGCCTCTaGCCCGGAATGGCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQEGTELLGNKSKCRLELGGGL*PGMAHC Trigger: GCAGTGGGCCATTCCGGGGCAGAGGCCGCCACCCAG...CTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | TGCAGCACACATACAGATGTGTTCACCTTCATTCCCGGGCACACGTGCACATACCTGCAGGGTCTGCAATaGTGCGAAGGTCCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSTHTDVFTFIPGHTCTYLQGLQ*CEGPGR Trigger: CCTGCCAGGACCTTCGCAGCATTGCAGACCCTGCAG...GTATGTGCACGTGTGCCCGGGAATGAAGGTGAACACATCTGTATGTGTGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | CTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGACTGTTCTGCAGGGTCTaGAATGCTGCGAAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPISDPLDTCGWSTGTKGLFCRV*NAAKVL Trigger: CAGGACCTTCGCAGCATTGCAGACCCTGCAGAACAG...TCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | TCACGTACCCTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTGGCAATACTGCTTCTTaGTCCAGGCCCAACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTLPISDPLDTCGWSTGGNTAS*SRPNRD Trigger: ATCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCC...ACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAGGGTACGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | TGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCATCCATGGCTGTTCCACAGCTTGTAGTTaGGTCTCAGGAGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGWSTGTKGLFLQPIHGCSTACS*VSGGAL Trigger: CAAGGCCCCTCCTGAGACCCAACTACAAGCTGTGGA...ACAGCCATGGATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | CCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCACCTAGCCATAGGTTCTaGAGCAAGCCAGCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: PWIHAAGVLVQRDCFSSPPSHRF*SKPADI Trigger: GATGTCTGCTGGCTTGCTGCAGAACCTATGGCTAGG...TGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000894.6 |
||
| CDS-3UTR GCA 90 bp | TGCAGCACACATACAGATGTGTTCACCTTCATTCCCGGGCACACGTGCACATACCAGGGTCTGCAATGCTaGGAAGGTCCTGGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSTHTDVFTFIPGHTCTYQGLQC*EGPGRS Trigger: TGACCTGCCAGGACCTTCGCAGCATTGCAGACCCTG...GTATGTGCACGTGTGCCCGGGAATGAAGGTGAACACATCTGTATGTGTGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | GCGCAGTGTGGGGTGCATGCACACACACTGTACAACATCCTTCCCATTTTGGTCCTGTTCTGCAGGGTCTaGAATGCTGCGAAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQCGVHAHTLYNILPILVLFCRV*NAAKVL Trigger: CAGGACCTTCGCAGCATTGCAGACCCTGCAGAACAG...GACCAAAATGGGAAGGATGTTGTACAGTGTGTGTGCATGCACCCCACACTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCACCAAGAAGCGTTTGGTaGTCAGATTTAGTGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DWRVGRTAEEHSSHRKDAPRSVW*SDLVRF Trigger: AAACCTCACTAAATCTGACCACCAAACGCTTCTTGG...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | GCGCAGTGTGGGGTGCATGCACACACACTGTACAACATCCTTCCCATTTTGGTCCAGGTGGCCCATCCGTaGCAATACTGCTTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQCGVHAHTLYNILPILVQVAHP*QYCFLL Trigger: GAGCAAGAAGCAGTATTGCCACGGATGGGCCACCTG...GACCAAAATGGGAAGGATGTTGTACAGTGTGTGTGCATGCACCCCACACTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | TGCGGCTGGAGTACTGGTACAAAGGGACTGTTTCTCCAGCCCATCCATGGCTGTTTCTTGGCAATGAGCTaGATGCCCTCCAGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: CGWSTGTKGLFLQPIHGCFLAMS*MPSRTL Trigger: CAATGTCCTGGAGGGCATCCAGCTCATTGCCAAGAA...ACAGCCATGGATGGGCTGGAGAAACAGTCCCTTTGTACCAGTACTCCAGCCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | GCGCAGTGTGGGGTGCATGCACACACACTGTACAACATCCTTCCCATTTTGGTCACCAGTGGTGACAGTTaGTCCTCTTCCATAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AQCGVHAHTLYNILPILVTSGDS*SSSIGT Trigger: GGTCCCTATGGAAGAGGACCAACTGTCACCACTGGT...GACCAAAATGGGAAGGATGTTGTACAGTGTGTGTGCATGCACCCCACACTGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | ACAACATCCTTCCCATTTTGGTCTGCTCAATGTGGCAGCAACCAAACCCCAGAGAGCAGCCACCAGTGGTaGCAGTTGGTCCTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTSFPFWSAQCGSNQTPESSHQW*QLVLFH Trigger: ATGGAAGAGGACCAACTGTCACCACTGGTGGCTGCT...CTCTGGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR TCA 90 bp | CTGTACAACATCCTTCCCATTTTGGTCTGCTCAATGTGGCAGCAACCAAACCCCAGCAGCCACCAGTGGTaGCAGTTGGTCCTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYNILPILVCSMWQQPNPSSHQW*QLVLFH Trigger: ATGGAAGAGGACCAACTGTCACCACTGGTGGCTGCT...GGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | AACCAAACCCCAGAGCTAGAAGCTATTGGGACAGAGGGTATGGATCGTGCTATTTCACTCTCCTGCAGTTaGTGCAGGTCCTGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQTPELEAIGTEGMDRAISLSCS*CRSWVR Trigger: CCTGACCCAGGACCTGCAGCAACTGCAGGAGAGTGA...AATAGCACGATCCATACCCTCTGTCCCAATAGCTTCTAGCTCTGGGGTTTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAAGCATAACTCCCTACCCACCATTGGGTCAGTTTTCTTCTCAAGGGGTCATCCGTGGCAATACTaGTTCTTGCTCCAGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPKHNSLPTIGSVFFSRGHPWQY*FLLQAQ Trigger: TTGGGCCTGGAGCAAGAAGCAGTATTGCCACGGATG...ACCCCTTGAGAAGAAAACTGACCCAATGGTGGGTAGGGAGTTATGCTTGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAATAAGTCTTCTTTAACATaGTCCAGGAGTGAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSKAADRWASPDTLNKSSLT*SRSESA Trigger: TGCTGACTCACTCCTGGAGCATGTTAAAGAAGACTT...ATTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS-3UTR GCA 90 bp | AACCAAACCCCAGAGCTAGAAGCTATTGGGACAGAGGGTATGGATCGTGCTATTGAGATGATGACGATCTaGGAGGAGTCGAGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NQTPELEAIGTEGMDRAIEMMTI*EESSSR Trigger: GCGGCTGCTCGACTCCTCGCAGATCGTCATCATCTC...AATAGCACGATCCATACCCTCTGTCCCAATAGCTTCTAGCTCTGGGGTTTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAATCCAAGAAGCGTTTGGTaGTCAGATTTAGTGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAGGSKAADRWASPDTLNPRSVW*SDLVRF Trigger: AAACCTCACTAAATCTGACCACCAAACGCTTCTTGG...ATTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR GCA 90 bp | CTGTACAACATCCTTCCCATTTTGGTCTGCTCAATGTGGCAGCAACCAAACCCCTCCAACAAGCAACTGTaGGCACTCCCTAGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYNILPILVCSMWQQPNPSNKQL*ALPSHR Trigger: CCTATGGCTAGGGAGTGCGCACAGTTGCTTGTTGGA...GGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000894.6 |
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| CDS-3UTR GCA 90 bp | CTGTACAACATCCTTCCCATTTTGGTCTGCTCAATGTGGCAGCAACCAAACCCCCCACCATGGTGTGGCTaGCTAGCCACTGGATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYNILPILVCSMWQQPNPPPWCG*LATGYD Trigger: ATCATATCCAGTGGCTAGGCAGCCACACCATGGTGG...GGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGTACAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR TCA 90 bp | TCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGAACATGCTCCAGGAGTaGGTCAGCAGCCACCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKQEGTELLGNKSKCRLENMLQE*VSSHQW Trigger: CCACTGGTGGCTGCTGACTCACTCCTGGAGCATGTT...CTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR GCA 90 bp | ACAACATCCTTCCCATTTTGGTCTGCTCAATGTGGCAGCAACCAAACCCCAGAGTATGACCATCTGTTCTaGAGGGTCTGCAATGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TTSFPFWSAQCGSNQTPEYDHLF*RVCNAA Trigger: CGCAGCATTGCAGACCCTGCAGAACAGATGGTCATA...CTCTGGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| 3UTR CAA 72 bp | GTGCATGCACACACACTGTACAACATCCTTCCCATTTaGGTCTGCTCAATGTGGCAGCAACCAAACCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHAHTLYNILPI*VCSMWQQPNPR Trigger: TCTGGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGTACAGTGTGTGTGCATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR GCA 90 bp | TGGCAGCAACCAAACCCCAGAGCTAGAAGCTATTGGGACAGAGGGTATGGATCGAAGTCTTCTTTAACATaGTCCAGGAGTGAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQQPNPRARSYWDRGYGSKSSLT*SRSESA Trigger: TGCTGACTCACTCCTGGAGCATGTTAAAGAAGACTT...CGATCCATACCCTCTGTCCCAATAGCTTCTAGCTCTGGGGTTTGGTTGCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CCA 90 bp | ACTGAAAGGAAATTAAGTCAGATAGGAAGAGGGAGTGAACATTCCCTCCAACACATCCCCACCATGGTGTaGCTGCCTAGCCACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TERKLSQIGRGSEHSLQHIPTMV*LPSHWI Trigger: TATCCAGTGGCTAGGCAGCCACACCATGGTGGGGAT...GTGTTGGAGGGAATGTTCACTCCCTCTTCCTATCTGACTTAATTTCCTTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| CDS-3UTR CCA 90 bp | TCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGTTCTTGGCAATGAGCTaGATGCCCTCCAGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SKQEGTELLGNKSKCRLEFLAMS*MPSRTL Trigger: CAATGTCCTGGAGGGCATCCAGCTCATTGCCAAGAA...CTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR GCA 90 bp | ACTGAAAGGAAATTAAGTCAGATAGGAAGAGGGAGTGAACATTCCCTCCAACACTCCTCCGAAAGCAGTTaGAGCTGTGTGGTACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TERKLSQIGRGSEHSLQHSSESS*SCVVQM Trigger: CATCTGTACCACACAGCTGCAACTGCTTTCGGAGGA...GTGTTGGAGGGAATGTTCACTCCCTCTTCCTATCTGACTTAATTTCCTTTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
||
| CDS-3UTR CCA 90 bp | GGGTTACAAACTGAAAGGAAATTAAGTCAGATAGGAAGAGGGAGTGAACATTCCGCAGTTGCAGCTGTGTaGTACAGATGTGCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLQTERKLSQIGRGSEHSAVAAV*YRCASG Trigger: ACCTGATGCACATCTGTACCACACAGCTGCAACTGC...GGAATGTTCACTCCCTCTTCCTATCTGACTTAATTTCCTTTCAGTTTGTAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| CDS GCA 90 bp | CGGCCGAGAGCCGGGCGCGGTGCACTAGGCGCGGGTCGGGGCGCCTaGGGCGTGGCGAAGAGCAGCACGTCAGAATCGCGAGGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPRAGRGALGAGRGA*GVAKSSTSESRGPV Trigger: CACTGGCCCTCGCGATTCTGACGTGCTGCTCTTCGCCACGCCGCAGGCGCCCCGACCCGCGCCTAGTGCACCGCGCCCGGCTCTCGGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| CDS GCA 90 bp | AGCTGCGGGGCGCCGACATCGGGCGCGGTGGAGATGATGACGATCTaGGAGGAGTCGAGCAGCCGCAACGCGCCCGCCCCGAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCGAPTSGAVEMMTI*EESSSRNAPAPSRA Trigger: GGCCCTGCTCGGGGCGGGCGCGTTGCGGCTGCTCGACTCCTCGCAGATCGTCATCATCTCCACCGCGCCCGATGTCGGCGCCCCGCAGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| CDS TCA 90 bp | TGGCGGCCTCTGCCCCGGAATGGCCCACTGCTACCAGCGAGGTACTaGTGGTCAGTCTCCAGATCCAGCCTCCGTTTCACCGGCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WRPLPRNGPLLPARY*WSVSRSSLRFTGGR Trigger: CCGCCCGCCGGTGAAACGGAGGCTGGATCTGGAGACTGACCATCAGTACCTCGCTGGTAGCAGTGGGCCATTCCGGGGCAGAGGCCGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
||
| CDS-3UTR CAA 90 bp | GCATACCCACCCCTCCTGGCCGCAGTCAGCCAAGGCCCTCACGTACCCTCCCCACTCACTCTCCTGCAGTaGCTGCAGGTCCTGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AYPPLLAAVSQGPHVPSPLTLLQ*LQVLGQ Trigger: CTGACCCAGGACCTGCAGCAACTGCAGGAGAGTGAG...TGGGGAGGGTACGTGAGGGCCTTGGCTGACTGCGGCCAGGAGGGGTGGGTATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS TCA 90 bp | GCCAGAGTCTGCAGTCCGGTCCTCCCCAGAGGATGTCTCCTGGCATaGGGTCTTCCCAGGGCTAATCCCGTCTGCACTCTCCTCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARVCSPVLPRGCLLA*GLPRANPVCTLLRA Trigger: TGCCCGGAGGAGAGTGCAGACGGGATTAGCCCTGGGAAGACCTCATGCCAGGAGACATCCTCTGGGGAGGACCGGACTGCAGACTCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS GCA 90 bp | TCACACCTTTCCCTGGGTGGCGGCCTCTGCCCCGGAATGGCCCACTaGTACCAGCGAGGTACTGATGGTCAGTCTCCAGATCCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHLSLGGGLCPGMAH*YQRGTDGQSPDPAS Trigger: GGAGGCTGGATCTGGAGACTGACCATCAGTACCTCGCTGGTAGCAGTGGGCCATTCCGGGGCAGAGGCCGCCACCCAGGGAAAGGTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | GGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCCACCCTCACTCTCCTGCAGTaGCTGCAGGTCCTGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPHRAPAARTPKVQLEPTLTLLQ*LQVLGQ Trigger: CTGACCCAGGACCTGCAGCAACTGCAGGAGAGTGAG...GGTGGGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | GGGCCTCACAGGGCCCCTGCAGCAAGGACACCAAAAGTGCAGTTAGAGCCCACCCAGGCCCAACAGGGATaGACTGGGATCCAAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPHRAPAARTPKVQLEPTQAQQG*TGIQGW Trigger: CCAGCCTTGGATCCCAGTCAATCCCTGTTGGGCCTG...GGTGGGCTCTAACTGCACTTTTGGTGTCCTTGCTGCAGGGGCCCTGTGAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS TCA 90 bp | TGGCGGCCTCTGCCCCGGAATGGCCCACTGCTACCAGCGAGGTACTaGTGGTCAGTCTCCAGATCCAGCCTCCGTTTCACCTCCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRPLPRNGPLLPARY*WSVSRSSLRFTSNK Trigger: CTTGTTGGAGGTGAAACGGAGGCTGGATCTGGAGACTGACCATCAGTACCTCGCTGGTAGCAGTGGGCCATTCCGGGGCAGAGGCCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000894.6 |
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| CDS CCA 90 bp | CGGAGATTTCACACCTTTCCCTGGGTGGCGGCCTCTGCCCCGGAATaGCCCACTGCTACCAGCGAGGTACTGATGGTCAGTCTCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RRFHTFPWVAASAPE*PTATSEVLMVSLQI Trigger: GATCTGGAGACTGACCATCAGTACCTCGCTGGTAGCAGTGGGCCATTCCGGGGCAGAGGCCGCCACCCAGGGAAAGGTGTGAAATCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 90 bp | CTCACCCTCCTCGAGACCAAAGTGATAGTCAAGGGCCTCGTGGGGTaGGGAGAGGCTGATGAACTCCCCAGGGAGGAGCCCAGAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LTLLETKVIVKGLVG*GEADELPREEPREV Trigger: GACTTCTCTGGGCTCCTCCCTGGGGAGTTCATCAGCCTCTCCCCACCCCACGAGGCCCTTGACTATCACTTTGGTCTCGAGGAGGGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | GACTGGAGGGTGGGGAGGACAGCAGAGGAGCACTCCAGCCATAGGAAGGACGCATGGCAATACTGCTTCTaGCTCCAGGCCCAACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DWRVGRTAEEHSSHRKDAWQYCF*LQAQQG Trigger: TCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCCA...TGCGTCCTTCCTATGGCTGGAGTGCTCCTCTGCTGTCCTCCCCACCCTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS TCA 90 bp | TCCTCCGAAAGCAGTTGCAGCTGTGTGGTACAGATGTGCATCAGGTaGTCCAGCTGCTGCTCACTCTCCTGCAGTTGCTGCAGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSESSCSCVVQMCIR*SSCCSLSCSCCRSW Trigger: CCAGGACCTGCAGCAACTGCAGGAGAGTGAGCAGCAGCTGGATCACCTGATGCACATCTGTACCACACAGCTGCAACTGCTTTCGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 90 bp | CGACACCGTCAGCTGAGCGGCTCAGCAGCTCCAAGAAGCGTTTGGTaGTCAGATTTAGTGAGGTTTCATAGCGTGACTTCTCCCCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHRQLSGSAAPRSVW*SDLVRFHSVTSPPE Trigger: CTCCGGGGGAGAAGTCACGCTATGAAACCTCACTAAATCTGACCACCAAACGCTTCTTGGAGCTGCTGAGCCGCTCAGCTGACGGTGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 90 bp | TTAACATGCTCCAGGAGTGAGTCAGCAGCCACCAGTGGTGACAGTTaGTCCTCTTCCATAGGGACCCTCAGGTGGCCCATCCGTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTCSRSESAATSGDS*SSSIGTLRWPIRGN Trigger: ATTGCCACGGATGGGCCACCTGAGGGTCCCTATGGAAGAGGACCAACTGTCACCACTGGTGGCTGCTGACTCACTCCTGGAGCATGTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | GCGCAGTGTGGGGTGCATGCACACACACTGTACAACATCCTTCCCATTTTGGTCCAGGCCCAACAGGGATaGACTGGGATCCAAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQCGVHAHTLYNILPILVQAQQG*TGIQGW Trigger: CCAGCCTTGGATCCCAGTCAATCCCTGTTGGGCCTG...GACCAAAATGGGAAGGATGTTGTACAGTGTGTGTGCATGCACCCCACACTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS GCA 90 bp | TCAGTCTCCAGATCCAGCCTCCGTTTCACCTCCAACAAGCAACTGTaGGCACTCCCTAGCCATAGGTTCTGCAGCAAGCCAGCAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: SVSRSSLRFTSNKQL*ALPSHRFCSKPADI Trigger: GATGTCTGCTGGCTTGCTGCAGAACCTATGGCTAGGGAGTGCGCACAGTTGCTTGTTGGAGGTGAAACGGAGGCTGGATCTGGAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000894.6 |
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| CDS GCA 90 bp | CTGATGAACTCCCCAGGGAGGAGCCCAGAGAAGTCTTCTTTAACATaGTCCAGGAGTGAGTCAGCAGCCACCAGTGGTGACAGTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMNSPGRSPEKSSLT*SRSESAATSGDSWS Trigger: GGACCAACTGTCACCACTGGTGGCTGCTGACTCACTCCTGGAGCATGTTAAAGAAGACTTCTCTGGGCTCCTCCCTGGGGAGTTCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 90 bp | CAACGACACCGTCAGCTGAGCGGCTCAGCAGCTCCAAGAAGCGTTTaGTGGTCAGATTTAGTGAGGTTTCATAGCGTGACTTCTCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QRHRQLSGSAAPRSV*WSDLVRFHSVTSPP Trigger: CGGGGGAGAAGTCACGCTATGAAACCTCACTAAATCTGACCACCAAACGCTTCTTGGAGCTGCTGAGCCGCTCAGCTGACGGTGTCGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | CAGGGCAGGAGGCTCCAAAGCTGCAGACAGGTGGGCATCTCCAGACACCCTGAAAGCTCCAAGAAGCGTTaGGTGGTCAGATTTAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGRRLQSCRQVGISRHPESSKKR*VVRFSE Trigger: CTCACTAAATCTGACCACCAAACGCTTCTTGGAGCT...TTCAGGGTGTCTGGAGATGCCCACCTGTCTGCAGCTTTGGAGCCTCCTGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | CTCCCCATCTCAGATCCCCTGGATACATGCGGCTGGAGTACTGGTACAAAGGGAAGCTCCAAGAAGCGTTaGGTGGTCAGATTTAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPISDPLDTCGWSTGTKGSSKKR*VVRFSE Trigger: CTCACTAAATCTGACCACCAAACGCTTCTTGGAGCT...TCCCTTTGTACCAGTACTCCAGCCGCATGTATCCAGGGGATCTGAGATGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | TCAAAGCAGGAGGGAACAGAACTGTTAGGAAACAAATCAAAGTGCAGACTGGAGTGGCAATACTGCTTCTaGCTCCAGGCCCAACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKQEGTELLGNKSKCRLEWQYCF*LQAQQG Trigger: TCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCCA...CTCCAGTCTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS-3UTR CAA 90 bp | CTGTACAACATCCTTCCCATTTTGGTCTGCTCAATGTGGCAGCAACCAAACCCCAACATCAATGGGGCCTaGTTTGCTCTTAAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LYNILPILVCSMWQQPNPNINGA*FALKGD Trigger: ATCTCCCTTAAGAGCAAACAAGGCCCCATTGATGTT...GGGGTTTGGTTGCTGCCACATTGAGCAGACCAAAATGGGAAGGATGTTGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS GCA 72 bp | GCGCCGACATCGGGCGCGGTGGAGATGATGACGATCTaGGAGGAGTCGAGCAGCCGCAACGCGCCCGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: APTSGAVEMMTI*EESSSRNAPAP Trigger: CGGGGCGGGCGCGTTGCGGCTGCTCGACTCCTCGCAGATCGTCATCATCTCCACCGCGCCCGATGTCGGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103145.11 |
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| CDS GCA 72 bp | TCCCTGGGTGGCGGCCTCTGCCCCGGAATGGCCCACTaGTACCAGCGAGGTACTGATGGTCAGTCTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLGGGLCPGMAH*YQRGTDGQSPD Trigger: ATCTGGAGACTGACCATCAGTACCTCGCTGGTAGCAGTGGGCCATTCCGGGGCAGAGGCCGCCACCCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS GCA 72 bp | CCGGAGATTTCACACCTTTCCCTGGGTGGCGGCCTCTaGCCCGGAATGGCCCACTGCTACCAGCGAGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PEISHLSLGGGL*PGMAHCYQRGT Trigger: AGTACCTCGCTGGTAGCAGTGGGCCATTCCGGGGCAGAGGCCGCCACCCAGGGAAAGGTGTGAAATCTCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 72 bp | CTCGAGACCAAAGTGATAGTCAAGGGCCTCGTGGGGTaGGGAGAGGCTGATGAACTCCCCAGGGAGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LETKVIVKGLVG*GEADELPREEP Trigger: GGGCTCCTCCCTGGGGAGTTCATCAGCCTCTCCCCACCCCACGAGGCCCTTGACTATCACTTTGGTCTCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS TCA 72 bp | CTGCCCCGGAATGGCCCACTGCTACCAGCGAGGTACTaGTGGTCAGTCTCCAGATCCAGCCTCCGTTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LPRNGPLLPARY*WSVSRSSLRFT Trigger: GGTGAAACGGAGGCTGGATCTGGAGACTGACCATCAGTACCTCGCTGGTAGCAGTGGGCCATTCCGGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 72 bp | AGCTGCTGCTCACTCTCCTGCAGTTGCTGCAGGTCCTaGGTCAGGCCTTCAAGCCGCTTACCAATCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SCCSLSCSCCRS*VRPSSRLPIPT Trigger: GGTGGGGATTGGTAAGCGGCTTGAAGGCCTGACCCAGGACCTGCAGCAACTGCAGGAGAGTGAGCAGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS GCA 72 bp | CATAGGGACCCTCAGGTGGCCCATCCGTGGCAATACTaGTTCTTGCTCCAGGCCCAACAGGGATTGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRDPQVAHPWQY*FLLQAQQGLTG Trigger: CCCAGTCAATCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCCACGGATGGGCCACCTGAGGGTCCCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 72 bp | GTCCTCTTCCATAGGGACCCTCAGGTGGCCCATCCGTaGCAATACTGCTTCTTGCTCCAGGCCCAACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLFHRDPQVAHP*QYCFLLQAQQG Trigger: TCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCCACGGATGGGCCACCTGAGGGTCCCTATGGAAGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CAA 90 bp | GGTCACATAGGCCAGGCGCTGGGTGTCGGAGTCCTCCGAAAGCAGTaGCAGCTGTGTGGTACAGATGTGCATCAGGTGATCCAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GHIGQALGVGVLRKQ*QLCGTDVHQVIQLL Trigger: CAGCAGCTGGATCACCTGATGCACATCTGTACCACACAGCTGCAACTGCTTTCGGAGGACTCCGACACCCAGCGCCTGGCCTATGTGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CAA 90 bp | TTCCATAGGGACCCTCAGGTGGCCCATCCGTGGCAATACTGCTTCTaGCTCCAGGCCCAACAGGGATTGACTGGGATCCAAGGCTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FHRDPQVAHPWQYCF*LQAQQGLTGIQGWG Trigger: TCCCCAGCCTTGGATCCCAGTCAATCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCCACGGATGGGCCACCTGAGGGTCCCTATGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS TCA 72 bp | GGCAATACTGCTTCTTGCTCCAGGCCCAACAGGGATTaGCTGGGATCCAAGGCTGGGGATGTGGAGGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GNTASCSRPNRD*LGSKAGDVEGG Trigger: ACCTCCCTCCACATCCCCAGCCTTGGATCCCAGTCAATCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
||
| CDS CAA 72 bp | TGGCAATACTGCTTCTTGCTCCAGGCCCAACAGGGATaGACTGGGATCCAAGGCTGGGGATGTGGAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WQYCFLLQAQQG*TGIQGWGCGGR Trigger: CCTCCCTCCACATCCCCAGCCTTGGATCCCAGTCAATCCCTGTTGGGCCTGGAGCAAGAAGCAGTATTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 72 bp | GGGTGTCGGAGTCCTCCGAAAGCAGTTGCAGCTGTGTaGTACAGATGTGCATCAGGTGATCCAGCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GCRSPPKAVAAV*YRCASGDPAAA Trigger: AGCAGCAGCTGGATCACCTGATGCACATCTGTACCACACAGCTGCAACTGCTTTCGGAGGACTCCGACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS TCA 72 bp | AGCAGTTGCAGCTGTGTGGTACAGATGTGCATCAGGTaGTCCAGCTGCTGCTCACTCTCCTGCAGTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSCSCVVQMCIR*SSCCSLSCSCC Trigger: GCAGCAACTGCAGGAGAGTGAGCAGCAGCTGGATCACCTGATGCACATCTGTACCACACAGCTGCAACTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS GCA 72 bp | CTTCAAGCCGCTTACCAATCCCCACCATGGTGTGGCTaGCTAGCCACTGGATATGATTCTTGGACTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LQAAYQSPPWCG*LATGYDSWTSW Trigger: CCAAGAAGTCCAAGAATCATATCCAGTGGCTAGGCAGCCACACCATGGTGGGGATTGGTAAGCGGCTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 72 bp | CGTCAGCTGAGCGGCTCAGCAGCTCCAAGAAGCGTTTaGTGGTCAGATTTAGTGAGGTTTCATAGCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: RQLSGSAAPRSV*WSDLVRFHSVT Trigger: AGTCACGCTATGAAACCTCACTAAATCTGACCACCAAACGCTTCTTGGAGCTGCTGAGCCGCTCAGCTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CAA 72 bp | GAATCCACAGCTTGTAGTTGGGTCTCAGGAGGGGCCTaGATCACTATGACCATCTGTTCTGCAGGGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ESTACSWVSGGA*ITMTICSAGSA Trigger: TGCAGACCCTGCAGAACAGATGGTCATAGTGATCAAGGCCCCTCCTGAGACCCAACTACAAGCTGTGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CAA 90 bp | GTCTCTGAAGAATCCACAGCTTGTAGTTGGGTCTCAGGAGGGGCCTaGATCACTATGACCATCTGTTCTGCAGGGTCTGCAATGCTGCGA | + |
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Preference number: 6 (lower is better) Translates to: VSEESTACSWVSGGA*ITMTICSAGSAMLR Trigger: TCGCAGCATTGCAGACCCTGCAGAACAGATGGTCATAGTGATCAAGGCCCCTCCTGAGACCCAACTACAAGCTGTGGATTCTTCAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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| CDS CCA 72 bp | CAGCTGAGCGGCTCAGCAGCTCCAAGAAGCGTTTGGTaGTCAGATTTAGTGAGGTTTCATAGCGTGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: QLSGSAAPRSVW*SDLVRFHSVTS Trigger: AGAAGTCACGCTATGAAACCTCACTAAATCTGACCACCAAACGCTTCTTGGAGCTGCTGAGCCGCTCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000894.6 ENSMUST00000103145.11 |
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