Pregenerated sensors for DZIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042156Ensembl transcript IDs: ENSMUST00000004055.10, ENSMUST00000047208.12
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGACTGGGCTTTGTGACCTACAAACACCAACTGAATTTAAATGTTaGGTTTGGCCAGGTCCTTACCTGTCCTGGGGGCTGGGGGTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: RTGLCDLQTPTEFKC*VWPGPYLSWGLGVG Trigger: CCCCACCCCCAGCCCCCAGGACAGGTAAGGACCTGGCCAAACCCAACATTTAAATTCAGTTGGTGTTTGTAGGTCACAAAGCCCAGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| 3UTR CCA 90 bp | AATAACGGCTCATCTTTTTCTAGTGACCATCTCACAGGAATCAATTaGCAGTTACAACAGCTGCACATTATTCATAAAACATCCAAGATG | + |
|
Preference number: 1 (lower is better) Translates to: NNGSSFSSDHLTGIN*QLQQLHIIHKTSKM Trigger: CATCTTGGATGTTTTATGAATAATGTGCAGCTGTTGTAACTGCCAATTGATTCCTGTGAGATGGTCACTAGAAAAAGATGAGCCGTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR CAA 90 bp | TTGCTATGGTTGGAAACACTAAGAGCATTAGAGTCCTATAGGCTGTaGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTTCCGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLWLETLRALESYRL*TALMLAASAQASDV Trigger: CACATCGGAAGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAATGCTCTTAGTGTTTCCAACCATAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR-3UTR CCA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAACCGGCTTCCTTGCTATaGTTGGAAACACTAAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RHADRASELSGIKGTFKEPASLL*LETLRA Trigger: TGCTCTTAGTGTTTCCAACCATAGCAAGGAAGCCGG...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR-3UTR TCA 90 bp | TCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGATGCCAGGGCTTTGCCCTCTACTGGTACAGTAGGTaGATGACAGGAGACCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SQRYISRSGFVRCQGFALYWYSR*MTGDPK Trigger: TTTGGGGTCTCCTGTCATTCACCTACTGTACCAGTA...GAGGGCAAAGCCCTGGCATCTAACAAACCCTGACCTTGAAATGTATCTCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| 3UTR CAA 90 bp | TGTCATAAGAGACACCCTTGTTCAGAACCGGCTTCCTTGCTATGGTaGGAAACACTAAGAGCATTAGAGTCCTATAGGCTGTTGACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: CHKRHPCSEPASLLW*ETLRALESYRLLTA Trigger: TGCAGTCAACAGCCTATAGGACTCTAATGCTCTTAGTGTTTCCAACCATAGCAAGGAAGCCGGTTCTGAACAAGGGTGTCTCTTATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR-3UTR GCA 90 bp | CTAGATGGTAGCCACAATAGTCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGGCAGTTACAACAGCTaGACATTATTCATAAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: LDGSHNSHRDTFQGQGLLGSYNS*TLFIKH Trigger: ATGTTTTATGAATAATGTGCAGCTGTTGTAACTGCC...TAACAAACCCTGACCTTGAAATGTATCTCTGTGACTATTGTGGCTACCATCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTGGGGTGTGAAGGCATGGTGGTCAGGGAGGGGCCGCCTAAGCTCTGTCAATCTGGAACACAACTCTaGATTTCTACCCAAACCCGT | + |
|
Preference number: 3 (lower is better) Translates to: RVGCEGMVVREGPPKLCQSGTQL*ISTQTR Trigger: ACGGGTTTGGGTAGAAATCAAGAGTTGTGTTCCAGA...TTGACAGAGCTTAGGCGGCCCCTCCCTGACCACCATGCCTTCACACCCCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGAGAGTCCTATAGGCTGTaGACTGCACTGATGCTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: RKELVSNGMLTGPQSSVGESYRL*TALMLA Trigger: CGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTC...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR-3UTR CAA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAATGGACAGCTGACAGTTaGTTCTCGGCACTGTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RHADRASELSGIKGTFKEWTADS*FSALCY Trigger: GTAACACAGTGCCGAGAACAAACTGTCAGCTGTCCA...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR CCA 72 bp | CTTTGTGACCTACAAACACCAACTGAATTTAAATGTTaGGTTTGGCCAGGTCCTTACCTGTCCTGGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCDLQTPTEFKC*VWPGPYLSWGL Trigger: CAGCCCCCAGGACAGGTAAGGACCTGGCCAAACCCAACATTTAAATTCAGTTGGTGTTTGTAGGTCACAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| 3UTR TCA 72 bp | ACCCAAACCCGTAGTGACAATAAAAACCTGTTGATGTaGGAGATGGGAAGGCTGTTGATCTCTGCCCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: TQTRSDNKNLLM*EMGRLLISAHN Trigger: GTTGTGGGCAGAGATCAACAGCCTTCCCATCTCTCACATCAACAGGTTTTTATTGTCACTACGGGTTTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTATGGACAGCTGACAGTTaGTTCTCGGCACTGTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVWTADS*FSALCY Trigger: GTAACACAGTGCCGAGAACAAACTGTCAGCTGTCCA...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR CCA 72 bp | TCATCTTTTTCTAGTGACCATCTCACAGGAATCAATTaGCAGTTACAACAGCTGCACATTATTCATAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SSFSSDHLTGIN*QLQQLHIIHKT Trigger: TGTTTTATGAATAATGTGCAGCTGTTGTAACTGCCAATTGATTCCTGTGAGATGGTCACTAGAAAAAGATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGAGGGCCCCAGGCCCTCTaGACCTGGGTGCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGGPQAL*TWVQLG Trigger: CCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCC...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTTTCCCGAGGGTTCACTaGGCCCCAGGCCCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAFPRVH*APGPLH Trigger: GTGCAGAGGGCCTGGGGCCCAGTGAACCCTCGGGAA...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCGGGCCCCAGGCCCTCTaGACCTGGGTGCAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSGPQAL*TWVQLG Trigger: CCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCC...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAGTCGCGGCCGGAACTaGAAGAAGGGCAGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHADRASELSGIKGTFKESRGRN*KKGRGP Trigger: GGGCCCCCTGCCCTTCTTCCAGTTCCGGCCGCGACT...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTGGGTCTACCCCTGACTaGCAGTGCGGGCACTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAGSTPD*QCGHFS Trigger: CGAGAAGTGCCCGCACTGCCAGTCAGGGGTAGACCC...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGAAGCTGGGGTCCCGCTTaGCCGGAGGCGGCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGSWGPA*PEAAPS Trigger: AGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCT...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGACCCTCTGCACCTGGGTaGAGCTGGGGTCCCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGPSAPG*SWGPAW Trigger: CCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGG...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAAGTCGCGGCCGGAACTaGAAGAAGGGCAGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKSRGRN*KKGRGP Trigger: GGGCCCCCTGCCCTTCTTCCAGTTCCGGCCGCGACT...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACCTTGTCCACGTCGATaGCGCTCAGCCGCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSNGMLTGPQSSVGSKGPCPRR*RSAASS Trigger: ACTGGAGGCGGCTGAGCGCCATCGACGTGGACAAGG...TCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTGGTTTAGCTGCGAGGTaGGGAACTCCTGCGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAGLAAR*GTPASA Trigger: TGCACTCGCAGGAGTTCCTCACCTCGCAGCTAAACC...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGGTGTGAAGGCATGGTGGTCAGGGAGGGGCCGCCTAAGCTCTGTCAAATGTGGGACAGGAGCTaGCCCTTTTCCTTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGCEGMVVREGPPKLCQMWDRS*PFSLLC Trigger: ACACAGCAAGGAAAAGGGGCAGCTCCTGTCCCACAT...TTGACAGAGCTTAGGCGGCCCCTCCCTGACCACCATGCCTTCACACCCCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTGTGGGGAAGCTGGGTTaGCTTGGGTACTTCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAVGKLG*LGYFFG Trigger: CCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCAC...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAATTCCCGAGGGTTCACTaGGCCCCAGGCCCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKFPRVH*APGPLH Trigger: GTGCAGAGGGCCTGGGGCCCAGTGAACCCTCGGGAA...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTGAGAAGCGAACTGCATaGGAGTGCTGTGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAEKRTA*ECCADS Trigger: GGAGTCTGCACAGCACTCTCATGCAGTTCGCTTCTC...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGAGCCCCTCGGGGCTGTTaGCCAGAGGGTAGTAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGAPRGC*PEGSRR Trigger: ACGTCTACTACCCTCTGGCCAACAGCCCCGAGGGGC...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGACCTCCTTCAGCAGCTTaGTCTCGCCAGCCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGPPSAA*SRQPAW Trigger: CCAAGCAGGCTGGCGAGATCAAGCTGCTGAAGGAGG...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCGGGTCTACCCCTGACTaGCAGTGCGGGCACTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSGSTPD*QCGHFS Trigger: CGAGAAGTGCCCGCACTGCCAGTCAGGGGTAGACCC...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATTAGTCCTCAGCTCCTaGGGGGATGGGCTGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGLVLSS*GDGLVL Trigger: GAGCACCAGCCCATCCCCCCAGGAGCTGAGGACTAA...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTAACGGTCTGCTTTTGTaGGGAAGCTGGGTTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQANGLLL*GSWVAL Trigger: CAAGGCAACCCAGCTTCCCCACAAAAGCAGACCGTT...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCCCTCCTTCAGCAGCTTaGTCTCGCCAGCCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSPPSAA*SRQPAW Trigger: CCAAGCAGGCTGGCGAGATCAAGCTGCTGAAGGAGG...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATGTGCAGACTCCAGCTaGGACCTAGTGAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGCADSS*DLVSCS Trigger: GCTGCAGCTCACTAGGTCTCAGCTGGAGTCTGCACA...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTGAAGTCCTTCTTCCTTaGATTCCCGAGGGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAEVLLP*IPEGSL Trigger: CAGTGAACCCTCGGGAATTCAAGGAAGAAGGACTTC...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGATGCCAGGGCTTTGCCCTCGCCCCTCGGGGCTGTTaGCCAGAGGGTAGTAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRYISRSGFVRCQGFALAPRGC*PEGSRR Trigger: ACGTCTACTACCCTCTGGCCAACAGCCCCGAGGGGC...GAGGGCAAAGCCCTGGCATCTAACAAACCCTGACCTTGAAATGTATCTCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTTGGGGACACGGAAGATaGTCTTCTCTCAGCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAWGHGR*SSLSSV Trigger: TACTGAGCTGAGAGAAGACCATCTTCCGTGTCCCCA...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGAAGCTGTAGCATGTTCTaGAAGTCCTGGGGACACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSNGMLTGPQSSVGSKGSCSMF*KSWGHG Trigger: TCCGTGTCCCCAGGACTTCCAGAACATGCTACAGCT...TCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTGTCATGGAAGGGACATaGTGCCTGTCTGAAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAVMEGT*CLSEES Trigger: ACTCTCTTCAGACAGGCACCATGTCCCTTCCATGAC...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGGTGTGAAGGCATGGTGGTCAGGGAGGGGCCGCCTAAGCTCTGTCAAAGGCGTCTTGGTGGATaGAAACCTTCTGAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RVGCEGMVVREGPPKLCQRRLGG*KPSEKM Trigger: CATTTTCTCAGAAGGTTTCCATCCACCAAGACGCCT...TTGACAGAGCTTAGGCGGCCCCTCCCTGACCACCATGCCTTCACACCCCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTAGTCCGTGTCACTTTTaGCAGCGCTCTTTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQASPCHF*QRSFQS Trigger: ACTTTGGAAAGAGCGCTGTCAAAAGTGACACGGACT...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAGAGGTGAGGAACTCCTaGGAGTGCATCAGGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHADRASELSGIKGTFKEEVRNS*ECIRYS Trigger: CGAATACCTGATGCACTCGCAGGAGTTCCTCACCTC...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTATAATCAGCTCGTTCTaGTCCTGCAGTTTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQAIISSF*SCSFWP Trigger: AGGCCAGAAACTGCAGGAGCAGAACGAGCTGATTAT...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | CTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGAATGGAAGGGACATGGTaGCTGTCTGAAGAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVSNGMLTGPQSSVGSKGMEGTW*LSEESD Trigger: GTCACTCTCTTCAGACAGGCACCATGTCCCTTCCAT...TCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGAGGCACTGGTAATAGCTaGCCTTGGCCTCTATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSNGMLTGPQSSVGSKGGTGNS*PWPLSS Trigger: TGATGATAGAGGCCAAGGCCAGCTATTACCAGTGCC...TCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAGGGTACTTCTTCGGGTaGAAAGGTGGTCATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHADRASELSGIKGTFKEGYFFG*KGGHGR Trigger: CCTTCCATGACCACCTTTCCACCCGAAGAAGTACCC...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CTAGATGGTAGCCACAATAGTCACAGAGATACATTTCAAGGTCAGGGTTTGTTAAGCTGGGGTCCCGCTTaGCCGGAGGCGGCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDGSHNSHRDTFQGQGLLSWGPA*PEAAPS Trigger: AGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCT...TAACAAACCCTGACCTTGAAATGTATCTCTGTGACTATTGTGGCTACCATCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| 3UTR CAA 72 bp | TTGGAAACACTAAGAGCATTAGAGTCCTATAGGCTGTaGACTGCACTGATGCTGGCGGCCTCGGCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LETLRALESYRL*TALMLAASAQA Trigger: AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAATGCTCTTAGTGTTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAATGTGGGACAGGAGCTaGCCCTTTTCCTTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKMWDRS*PFSLLC Trigger: ACACAGCAAGGAAAAGGGGCAGCTCCTGTCCCACAT...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTAGGGATTCTCGGATTTaGTGGATGTCAGGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LESYRLLTALMLAASAQARDSRI*WMSGIC Trigger: ACAAATGCCTGACATCCAGCAAATCCGAGAATCCCT...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAGGTAATAGCTGGCCTTaGCCTCTATCATCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHADRASELSGIKGTFKEGNSWP*PLSSAA Trigger: AGCAGCTGATGATAGAGGCCAAGGCCAGCTATTACC...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCATGTCAATCTCCTTCTaGAGCCTGTCGGTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSMSISF*SLSVWA Trigger: GGCCCAGACCGACAGGCTCCAGAAGGAGATTGACAT...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGAAGCTGTAGCATGTTCTaGAAGTCCTGGGGACACGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGSCSMF*KSWGHG Trigger: TCCGTGTCCCCAGGACTTCCAGAACATGCTACAGCT...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAACTTCGGGTGGAAAGGTaGTCATGGAAGGGACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKLRVER*SWKGHG Trigger: ACCATGTCCCTTCCATGACCACCTTTCCACCCGAAG...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAGAAGCTGGGTTGCCTTaGGTACTTCTTCGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKEAGLP*VLLRVE Trigger: TTCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTC...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAGAAGTCCTTCTTCCTTaGATTCCCGAGGGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKEVLLP*IPEGSL Trigger: CAGTGAACCCTCGGGAATTCAAGGAAGAAGGACTTC...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCGAGGTGAGGAACTCCTaGGAGTGCATCAGGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSEVRNS*ECIRYS Trigger: CGAATACCTGATGCACTCGCAGGAGTTCCTCACCTC...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCATCTGTCCACTTGCTTaGCTGGCTGTCAAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSICPLA*LAVKQL Trigger: CAGCTGCTTGACAGCCAGGCAAGCAAGTGGACAGAT...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAATGGAAGGGACATGGTaGCTGTCTGAAGAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKMEGTW*LSEESD Trigger: GTCACTCTCTTCAGACAGGCACCATGTCCCTTCCAT...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | CTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACGTCATCAGCATCTGTaGACTTTAACTCTTGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LVSNGMLTGPQSSVGSKGRHQHL*TLTLAT Trigger: CGTTGCAAGAGTTAAAGTGCACAGATGCTGATGACG...TCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAGGTAATAGCTGGCCTTaGCCTCTATCATCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKGNSWP*PLSSAA Trigger: AGCAGCTGATGATAGAGGCCAAGGCCAGCTATTACC...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATGGGGACACGGAAGATaGTCTTCTCTCAGCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGWGHGR*SSLSSV Trigger: TACTGAGCTGAGAGAAGACCATCTTCCGTGTCCCCA...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAGTCATGGAAGGGACATaGTGCCTGTCTGAAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKVMEGT*CLSEES Trigger: ACTCTCTTCAGACAGGCACCATGTCCCTTCCATGAC...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCGTGGAAAGGTGGTCATaGAAGGGACATGGTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSVERWS*KGHGAC Trigger: ACAGGCACCATGTCCCTTCCATGACCACCTTTCCAC...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCGAGGTCCTCTTCATCTaGCTCCTCTTCCGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSEVLFI*LLFRAE Trigger: TTCAGCTCGGAAGAGGAGCCAGATGAAGAGGACCTC...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAATCTATCATCAGCTGCTaGGTGGACAGCATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKSIISC*VDSIFF Trigger: GAAGAAGATGCTGTCCACGCAGCAGCTGATGATAGA...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAGGGATTCTCGGATTTaGTGGATGTCAGGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHADRASELSGIKGTFKERDSRI*WMSGIC Trigger: ACAAATGCCTGACATCCAGCAAATCCGAGAATCCCT...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGATGCCAGGGCTTTGCCCTCTGCTCCTGCAGTTTCTaGCCTAACTCTTCTACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRYISRSGFVRCQGFALCSCSF*PNSSTR Trigger: GCGGGTAGAAGAGTTAGGCCAGAAACTGCAGGAGCA...GAGGGCAAAGCCCTGGCATCTAACAAACCCTGACCTTGAAATGTATCTCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGAGCTGATGCTGCTGTATaGTTTACTGGCAAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSNGMLTGPQSSVGSKGADAAV*FTGKFS Trigger: AGAGAATTTGCCAGTAAACCATACAGCAGCATCAGC...TCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGATGCCAGGGCTTTGCCCTCCTTCGGGTGGAAAGGTaGTCATGGAAGGGACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRYISRSGFVRCQGFALLRVER*SWKGHG Trigger: ACCATGTCCCTTCCATGACCACCTTTCCACCCGAAG...GAGGGCAAAGCCCTGGCATCTAACAAACCCTGACCTTGAAATGTATCTCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGATGCCAGGGCTTTGCCCTCGAAGCTGGGTTGCCTTaGGTACTTCTTCGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQRYISRSGFVRCQGFALEAGLP*VLLRVE Trigger: TTCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTC...GAGGGCAAAGCCCTGGCATCTAACAAACCCTGACCTTGAAATGTATCTCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAGGCGTCTTGGTGGATaGAAACCTTCTGAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RHADRASELSGIKGTFKERRLGG*KPSEKM Trigger: CATTTTCTCAGAAGGTTTCCATCCACCAAGACGCCT...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACACCCTCTGCACCTGGGTaGAGCTGGGGTCCCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTPSAPG*SWGPAW Trigger: CCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGG...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CTTAATAAGCAGCCACAGTCGCAGTGTGTGATGGAGGACTTTACTGGTACAGTACGAAGCTTCTCTATGTaGGACAGGAGCTGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNKQPQSQCVMEDFTGTVRSFSM*DRSCPF Trigger: AAAGGGGCAGCTCCTGTCCCACATAGAGAAGCTTCG...TACTGTACCAGTAAAGTCCTCCATCACACACTGCGACTGTGGCTGCTTATTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | CTTAATAAGCAGCCACAGTCGCAGTGTGTGATGGAGGACTTTACTGGTACAGTAGTGGAAAGGTGGTCATaGAAGGGACATGGTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNKQPQSQCVMEDFTGTVVERWS*KGHGAC Trigger: ACAGGCACCATGTCCCTTCCATGACCACCTTTCCAC...TACTGTACCAGTAAAGTCCTCCATCACACACTGCGACTGTGGCTGCTTATTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAACTCGGTTCGTTTTCATaGAGTCCTTCTTCCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKLGSFS*SPSSLN Trigger: ATTCAAGGAAGAAGGACTTCATGAAAACGAACCGAG...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCACAGCATCTTCTTCCTaGGTTTACACTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSTASSS*VYTPPS Trigger: TGAAGGAGGAGTGTAAACGCAGGAAGAAGATGCTGT...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | CTAGATGGTAGCCACAATAGTCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGTGGGGAAGCTGGGTTaGCTTGGGTACTTCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGSHNSHRDTFQGQGLLVGKLG*LGYFFG Trigger: CCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCAC...TAACAAACCCTGACCTTGAAATGTATCTCTGTGACTATTGTGGCTACCATCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCCGTCATCAGCATCTGTaGACTTTAACTCTTGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSRHQHL*TLTLAT Trigger: CGTTGCAAGAGTTAAAGTGCACAGATGCTGATGACG...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGACTTTGTAGGAACGCTTaGTTCATAAAGGCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGLCRNA*FIKALS Trigger: TGACAAGGCCTTTATGAACCAAGCGTTCCTACAAAG...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGAGCTGATGCTGCTGTATaGTTTACTGGCAAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKELVSNGMLTGPQSSVGADAAV*FTGKFS Trigger: AGAGAATTTGCCAGTAAACCATACAGCAGCATCAGC...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR CAA 72 bp | AGACACCCTTGTTCAGAACCGGCTTCCTTGCTATGGTaGGAAACACTAAGAGCATTAGAGTCCTATAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHPCSEPASLLW*ETLRALESYRL Trigger: CAGCCTATAGGACTCTAATGCTCTTAGTGTTTCCAACCATAGCAAGGAAGCCGGTTCTGAACAAGGGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTTGTGACCTACAAACACCAACTGAATTTAAATGTTGGGTTTGGCCAGGTCCTTTGCATGAGAGTGCTGTaGAGACTCCAGCTGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: FVTYKHQLNLNVGFGQVLCMRVL*RLQLRP Trigger: AGGTCTCAGCTGGAGTCTGCACAGCACTCTCATGCA...AAGGACCTGGCCAAACCCAACATTTAAATTCAGTTGGTGTTTGTAGGTCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCGATTCTCGGATTTGCTaGATGTCAGGCATTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSDSRIC*MSGICF Trigger: AAAACAAATGCCTGACATCCAGCAAATCCGAGAATC...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAGGTTTAGCTGCGAGGTaGGGAACTCCTGCGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTGLAAR*GTPASA Trigger: TGCACTCGCAGGAGTTCCTCACCTCGCAGCTAAACC...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR CAA 72 bp | ACATTTCAAGGTCAGGGTTTGTTAGATGCCAGGGCTTaGCCCTCTTATAAAGCTAGCCAAGCGGTTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TFQGQGLLDARA*PSYKASQAVFL Trigger: TAAGAAAACCGCTTGGCTAGCTTTATAAGAGGGCAAAGCCCTGGCATCTAACAAACCCTGACCTTGAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAGAGAAGCGAACTGCATaGGAGTGCTGTGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTEKRTA*ECCADS Trigger: GGAGTCTGCACAGCACTCTCATGCAGTTCGCTTCTC...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | CTAGATGGTAGCCACAATAGTCACAGAGATACATTTCAAGGTCAGGGTTTGTTAGCGCTCTTTCCAAAGTaGCTCATGCTGCTTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDGSHNSHRDTFQGQGLLALFPK*LMLLLG Trigger: ACCTAAAAGCAGCATGAGTCACTTTGGAAAGAGCGC...TAACAAACCCTGACCTTGAAATGTATCTCTGTGACTATTGTGGCTACCATCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | CTAGATGGTAGCCACAATAGTCACAGAGATACATTTCAAGGTCAGGGTTTGTTAATAATCAGCTCGTTCTaGTCCTGCAGTTTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDGSHNSHRDTFQGQGLLIISSF*SCSFWP Trigger: AGGCCAGAAACTGCAGGAGCAGAACGAGCTGATTAT...TAACAAACCCTGACCTTGAAATGTATCTCTGTGACTATTGTGGCTACCATCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCGTGCACTTTAACTCTTaGAACGATTCCTTTTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LHCRKELVSNGMLTGPQSVHFNS*NDSFLI Trigger: TATCAAAAAGGAATCGTTGCAAGAGTTAAAGTGCAC...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTACGAAGCTTCTCTATGTaGGACAGGAGCTGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVRSFSM*DRSCPF Trigger: AAAGGGGCAGCTCCTGTCCCACATAGAGAAGCTTCG...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTATGCTCCTGCAGTTTCTaGCCTAACTCTTCTACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVCSCSF*PNSSTR Trigger: GCGGGTAGAAGAGTTAGGCCAGAAACTGCAGGAGCA...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTAGGGTACTTCTTCGGGTaGAAAGGTGGTCATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVGYFFG*KGGHGR Trigger: CCTTCCATGACCACCTTTCCACCCGAAGAAGTACCC...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTAGAGGTCCTCTTCATCTaGCTCCTCTTCCGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVEVLFI*LLFRAE Trigger: TTCAGCTCGGAAGAGGAGCCAGATGAAGAGGACCTC...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| 3UTR CAA 72 bp | CACAATAGTCACAGAGATACATTTCAAGGTCAGGGTTaGTTAGATGCCAGGGCTTTGCCCTCTTATAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNSHRDTFQGQG*LDARALPSYKA Trigger: AGCTTTATAAGAGGGCAAAGCCCTGGCATCTAACAAACCCTGACCTTGAAATGTATCTCTGTGACTATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | TTTGTGACCTACAAACACCAACTGAATTTAAATGTTGGGTTTGGCCAGGTCCTTACAGCATCTTCTTCCTaGGTTTACACTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVTYKHQLNLNVGFGQVLTASSS*VYTPPS Trigger: TGAAGGAGGAGTGTAAACGCAGGAAGAAGATGCTGT...AAGGACCTGGCCAAACCCAACATTTAAATTCAGTTGGTGTTTGTAGGTCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACATGCATGAGAGTGCTGTaGAGACTCCAGCTGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTCMRVL*RLQLRP Trigger: AGGTCTCAGCTGGAGTCTGCACAGCACTCTCATGCA...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAATCTGTCCACTTGCTTaGCTGGCTGTCAAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTICPLA*LAVKQL Trigger: CAGCTGCTTGACAGCCAGGCAAGCAAGTGGACAGAT...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTAGGCACTGGTAATAGCTaGCCTTGGCCTCTATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVGTGNS*PWPLSS Trigger: TGATGATAGAGGCCAAGGCCAGCTATTACCAGTGCC...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | CTAGATGGTAGCCACAATAGTCACAGAGATACATTTCAAGGTCAGGGTTTGTTACTCGGTTCGTTTTCATaGAGTCCTTCTTCCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LDGSHNSHRDTFQGQGLLLGSFS*SPSSLN Trigger: ATTCAAGGAAGAAGGACTTCATGAAAACGAACCGAG...TAACAAACCCTGACCTTGAAATGTATCTCTGTGACTATTGTGGCTACCATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACATGGAGCCTGTCGGTCTaGGCCTTTGTATTATACTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTWSLSV*AFVLYS Trigger: CGAGTATAATACAAAGGCCCAGACCGACAGGCTCCA...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAGCGCTCTTTCCAAAGTaGCTCATGCTGCTTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTALFPK*LMLLLG Trigger: ACCTAAAAGCAGCATGAGTCACTTTGGAAAGAGCGC...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAAGTCCGTGTCACTTTTaGCAGCGCTCTTTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTSPCHF*QRSFQS Trigger: ACTTTGGAAAGAGCGCTGTCAAAAGTGACACGGACT...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTACTTTGTAGGAACGCTTaGTTCATAAAGGCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVLCRNA*FIKALS Trigger: TGACAAGGCCTTTATGAACCAAGCGTTCCTACAAAG...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAGATTCTCGGATTTGCTaGATGTCAGGCATTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTDSRIC*MSGICF Trigger: AAAACAAATGCCTGACATCCAGCAAATCCGAGAATC...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTAGTGCACTTTAACTCTTaGAACGATTCCTTTTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVVHFNS*NDSFLI Trigger: TATCAAAAAGGAATCGTTGCAAGAGTTAAAGTGCAC...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | GCAGTGTCAGGACGTCCACGGCGCCGGCAACCTTGTCCACGTCGATaGCGCTCAGCCGCCTCCAGTCCACGCTCTCCAGTCGCGGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVSGRPRRRQPCPRR*RSAASSPRSPVAAG Trigger: TCCGGCCGCGACTGGAGAGCGTGGACTGGAGGCGGCTGAGCGCCATCGACGTGGACAAGGTTGCCGGCGCCGTGGACGTCCTGACACTGC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | TCCTTGAATTCCCGAGGGTTCACTGGGCCCCAGGCCCTCTGCACCTaGGTGCAGCTGGGGTCCCGCTTGGCCGGAGGCGGCTCCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLNSRGFTGPQALCT*VQLGSRLAGGGSLC Trigger: GCAGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCCAGTGAACCCTCGGGAATTCAAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | CCCGAGGGTTCACTGGGCCCCAGGCCCTCTGCACCTGGGTGCAGCTaGGGTCCCGCTTGGCCGGAGGCGGCTCCCTCTGCTCTATTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PEGSLGPRPSAPGCS*GPAWPEAAPSALFY Trigger: GTAAAATAGAGCAGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCCAGTGAACCCTCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAACAGCTGGGGTCCCGCTaGGCCGGAGGCGGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKQLGSR*AGGGSL Trigger: GAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTG...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCCAGCTGGGGTCCCGCTaGGCCGGAGGCGGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHCRKELVSNGMLTGPQSQLGSR*AGGGSL Trigger: GAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTG...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 90 bp | GAGGTGAGGAACTCCTGCGAGTGCATCAGGTATTCGATCGTGAGCTaGGCCAGGCGGATCAGCTTCAGCAGCACTGGGTCTACCCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: EVRNSCECIRYSIVS*ARRISFSSTGSTPD Trigger: GTCAGGGGTAGACCCAGTGCTGCTGAAGCTGATCCGCCTGGCGCAGCTCACGATCGAATACCTGATGCACTCGCAGGAGTTCCTCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGGTGTGAAGGCATGGTGGTCAGGGAGGGGCCGCCTAAGCTCTGTCAATCCTCCTTCAGCAGCTaGATCTCGCCAGCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVGCEGMVVREGPPKLCQSSFSS*ISPACL Trigger: CAAGCAGGCTGGCGAGATCAAGCTGCTGAAGGAGGA...TTGACAGAGCTTAGGCGGCCCCTCCCTGACCACCATGCCTTCACACCCCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGGTGTGAAGGCATGGTGGTCAGGGAGGGGCCGCCTAAGCTCTGTCAAGGAAGCTGGGTTGCCTaGGGTACTTCTTCGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVGCEGMVVREGPPKLCQGSWVA*GTSSGG Trigger: TCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTCC...TTGACAGAGCTTAGGCGGCCCCTCCCTGACCACCATGCCTTCACACCCCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGGTGTGAAGGCATGGTGGTCAGGGAGGGGCCGCCTAAGCTCTGTCAATGTGGGGAAGCTGGGTaGCCTTGGGTACTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVGCEGMVVREGPPKLCQCGEAG*PWVLLR Trigger: CCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCACA...TTGACAGAGCTTAGGCGGCCCCTCCCTGACCACCATGCCTTCACACCCCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS TCA 90 bp | GTGACTCATGCTGCTTTTAGGTGGCTGTGTGGCAGCGGTGGCAAGTaGGTCTGGGGAGAGGTAAGCATGGAGGAGGTCCTCTTCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTHAAFRWLCGSGGK*VWGEVSMEEVLFIW Trigger: CCAGATGAAGAGGACCTCCTCCATGCTTACCTCTCCCCAGACTCACTTGCCACCGCTGCCACACAGCCACCTAAAAGCAGCATGAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 90 bp | TTCTCGTCCTCCAGCTTGCAGAAGGTGATGTTCATAATGTTCTCCTaGAGTGTCAGGACGTCCACGGCGCCGGCAACCTTGTCCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FSSSSLQKVMFIMFS*SVRTSTAPATLSTS Trigger: CGACGTGGACAAGGTTGCCGGCGCCGTGGACGTCCTGACACTGCAGGAGAACATTATGAACATCACCTTCTGCAAGCTGGAGGACGAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | TTAGAGTCCTATAGGCTGTTGACTGCACTGATGCTGGCGGCCTCGGCACAGGCTCTGAAGGGAGGCGTCTaGGTGGATGGAAACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LESYRLLTALMLAASAQALKGGV*VDGNLL Trigger: CAGAAGGTTTCCATCCACCAAGACGCCTCCCTTCAG...AGCCTGTGCCGAGGCCGCCAGCATCAGTGCAGTCAACAGCCTATAGGACTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 90 bp | CCCTCCGTCCAGTCCGTGTCACTTTTGACAGCGCTCTTTCCAAAGTaGCTCATGCTGCTTTTAGGTGGCTGTGTGGCAGCGGTGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSVQSVSLLTALFPK*LMLLLGGCVAAVAS Trigger: ACTTGCCACCGCTGCCACACAGCCACCTAAAAGCAGCATGAGTCACTTTGGAAAGAGCGCTGTCAAAAGTGACACGGACTGGACGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAGGAAGCTGGGTTGCCTaGGGTACTTCTTCGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHADRASELSGIKGTFKEGSWVA*GTSSGG Trigger: TCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTCC...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAATCCTCCTTCAGCAGCTaGATCTCGCCAGCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKSSFSS*ISPACL Trigger: CAAGCAGGCTGGCGAGATCAAGCTGCTGAAGGAGGA...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAATGTGGGGAAGCTGGGTaGCCTTGGGTACTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKCGEAG*PWVLLR Trigger: CCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCACA...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAATCGATCTGTCCACTaGCTTGCCTGGCTGTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHADRASELSGIKGTFKENRSVH*LAWLSS Trigger: GCTTGACAGCCAGGCAAGCAAGTGGACAGATCGATT...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAATGTCGGTCTGGGCCTTaGTATTATACTCGAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHADRASELSGIKGTFKECRSGP*YYTRGE Trigger: CTCACCTCGAGTATAATACAAAGGCCCAGACCGACA...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 90 bp | GACAGGAGCTGCCCCTTTTCCTTGCTGTGTTCTTCGTTGAGAACTTaGAATCGATCTGTCCACTTGCTTGCCTGGCTGTCAAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DRSCPFSLLCSSLRT*NRSVHLLAWLSSSC Trigger: ACAGCTGCTTGACAGCCAGGCAAGCAAGTGGACAGATCGATTTCAAGTTCTCAACGAAGAACACAGCAAGGAAAAGGGGCAGCTCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | CTATTGGTTCCAGTATGTGTGAAGAGAACACTTGCTCATGTACCATaGTCAGGCTGGATGCACCATCCAGATTCTGTGTGGCCGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVPVCVKRTLAHVP*SGWMHHPDSVWPRQ Trigger: CTGCCTCGGCCACACAGAATCTGGATGGTGCATCCAGCCTGACCATGGTACATGAGCAAGTGTTCTCTTCACACATACTGGAACCAATAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | GGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAACTCATAAACATCCCCTaGACCTTCTCCATCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GMLTGPQSSVGSKGLLRKLINIP*TFSISS Trigger: CGAGGAGATGGAGAAGGTCAAGGGGATGTTTATGAG...TTTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGAGTGCCTATGTTGGACTaGATCTGGATGTTAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSNGMLTGPQSSVGSKGVPMLD*IWMLDF Trigger: GAAGTCTAACATCCAGATCAAGTCCAACATAGGCAC...TCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAGTGACTAAGTTGCTCTaGAGTGTGCTCGGTTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RHADRASELSGIKGTFKEVTKLL*SVLGSF Trigger: AAACGAACCGAGCACACTCAAGAGCAACTTAGTCAC...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 90 bp | CTGCATTTCATAGTCCTTAGAGAAGCGAACTGCATGAGAGTGCTGTaGAGACTCCAGCTGAGACCTAGTGAGCTGCAGCTGTTCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHFIVLREANCMRVL*RLQLRPSELQLFLQ Trigger: TTGAAGGAACAGCTGCAGCTCACTAGGTCTCAGCTGGAGTCTGCACAGCACTCTCATGCAGTTCGCTTCTCTAAGGACTATGAAATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | TCAAGCAGCTGTAGCATGTTCTGGAAGTCCTGGGGACACGGAAGATaGTCTTCTCTCAGCTCAGTAACGTCTCTTAAGGTGCCTATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSMFWKSWGHGR*SSLSSVTSLKVPML Trigger: CAACATAGGCACCTTAAGAGACGTTACTGAGCTGAGAGAAGACCATCTTCCGTGTCCCCAGGACTTCCAGAACATGCTACAGCTGCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | TTATCAGTAAACACAGTTCTCTGTCTGACCAACGGTCTGCTTTTGTaGGGAAGCTGGGTTGCCTTGGGTACTTCTTCGGGTGGAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSVNTVLCLTNGLLL*GSWVALGTSSGGKV Trigger: CACCTTTCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCACAAAAGCAGACCGTTGGTCAGACAGAGAACTGTGTTTACTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | GTGTCAGCAGGGTTCATTCCCGGCACTGCTTTATTCCCACTTCCTTaGGGTAAAGCCATGGTCTCAACAGTGTCAGTCTGTATCGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VSAGFIPGTALFPLP*GKAMVSTVSVCIVM Trigger: CATTACGATACAGACTGACACTGTTGAGACCATGGCTTTACCCCAAGGAAGTGGGAATAAAGCAGTGCCGGGAATGAACCCTGCTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTAACGGCGCCGGCAACCTaGTCCACGTCGATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVTAPAT*STSMAL Trigger: GAGCGCCATCGACGTGGACAAGGTTGCCGGCGCCGT...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATTCTCGTCCTCCAGCTaGCAGAAGGTGATGTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: RKELVSNGMLTGPQSSVGFSSSS*QKVMFI Trigger: TATGAACATCACCTTCTGCAAGCTGGAGGACGAGAA...TCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | TTACACTGCAGAAAAGAACTCGTTAGTAACGGCATGCTGACAGGGCCTCAGAGCCAGTCCGTGTCACTTTaGACAGCGCTCTTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHCRKELVSNGMLTGPQSQSVSL*TALFPK Trigger: CTTTGGAAAGAGCGCTGTCAAAAGTGACACGGACTG...GCTCTGAGGCCCTGTCAGCATGCCGTTACTAACGAGTTCTTTTCTGCAGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 90 bp | TCCTCCATCTTACAGATCAGCTGGTGCTCGAGGGATTCTCGGATTTaGTGGATGTCAGGCATTTGTTTTGCTAGGTCATGTCTGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SSILQISWCSRDSRI*WMSGICFARSCLAT Trigger: AGTTGCCAGACATGACCTAGCAAAACAAATGCCTGACATCCAGCAAATCCGAGAATCCCTCGAGCACCAGCTGATCTGTAAGATGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAACGGCGCCGGCAACCTaGTCCACGTCGATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTTAPAT*STSMAL Trigger: GAGCGCCATCGACGTGGACAAGGTTGCCGGCGCCGT...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAACTTAAGGTGCCTATGTaGGACTTGATCTGGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RHADRASELSGIKGTFKELKVPM*DLIWML Trigger: TAACATCCAGATCAAGTCCAACATAGGCACCTTAAG...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 90 bp | CTGTCTGAAGAGAGTGACACTTTTTCCTCCATCTTACAGATCAGCTaGTGCTCGAGGGATTCTCGGATTTGCTGGATGTCAGGCATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSEESDTFSSILQIS*CSRDSRICWMSGIC Trigger: ACAAATGCCTGACATCCAGCAAATCCGAGAATCCCTCGAGCACCAGCTGATCTGTAAGATGGAGGAAAAAGTGTCACTCTCTTCAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CTTAATAAGCAGCCACAGTCGCAGTGTGTGATGGAGGACTTTACTGGTACAGTACTCATAAACATCCCCTaGACCTTCTCCATCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LNKQPQSQCVMEDFTGTVLINIP*TFSISS Trigger: CGAGGAGATGGAGAAGGTCAAGGGGATGTTTATGAG...TACTGTACCAGTAAAGTCCTCCATCACACACTGCGACTGTGGCTGCTTATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTAATCTCGCCAGCCTGCTaGGTGAGCAGCTGCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVISPAC*VSSCLL Trigger: GAGCAAGCAGCTGCTCACCAAGCAGGCTGGCGAGAT...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CGGCATGCTGACAGGGCCTCAGAGCTCAGTGGGATCAAAGGGACTTTTAAGGAAAAGAAAGTTCTTCTATaGGTTCCAGTATGTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHADRASELSGIKGTFKEKKVLL*VPVCVK Trigger: CTTCACACATACTGGAACCAATAGAAGAACTTTCTT...TTCCTTAAAAGTCCCTTTGATCCCACTGAGCTCTGAGGCCCTGTCAGCATGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | TTTGTGACCTACAAACACCAACTGAATTTAAATGTTGGGTTTGGCCAGGTCCTTCTGAAGGGAGGCGTCTaGGTGGATGGAAACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FVTYKHQLNLNVGFGQVLLKGGV*VDGNLL Trigger: CAGAAGGTTTCCATCCACCAAGACGCCTCCCTTCAG...AAGGACCTGGCCAAACCCAACATTTAAATTCAGTTGGTGTTTGTAGGTCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS TCA 90 bp | ATGCTGCTGTATGGTTTACTGGCAAATTCTCTAATCTGCTGCTTCTaGCTGATAATCAGCTCGTTCTGCTCCTGCAGTTTCTGGCCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: MLLYGLLANSLICCF*LIISSFCSCSFWPN Trigger: GTTAGGCCAGAAACTGCAGGAGCAGAACGAGCTGATTATCAGTCAGAAGCAGCAGATTAGAGAATTTGCCAGTAAACCATACAGCAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 90 bp | TCTGAAGAGAGTGACACTTTTTCCTCCATCTTACAGATCAGCTGGTaGTCGAGGGATTCTCGGATTTGCTGGATGTCAGGCATTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEESDTFSSILQISW*SRDSRICWMSGICF Trigger: AAAACAAATGCCTGACATCCAGCAAATCCGAGAATCCCTCGAGCACCAGCTGATCTGTAAGATGGAGGAAAAAGTGTCACTCTCTTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | CTTAATAAGCAGCCACAGTCGCAGTGTGTGATGGAGGACTTTACTGGTACAGTAGTGCCTATGTTGGACTaGATCTGGATGTTAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNKQPQSQCVMEDFTGTVVPMLD*IWMLDF Trigger: GAAGTCTAACATCCAGATCAAGTCCAACATAGGCAC...TACTGTACCAGTAAAGTCCTCCATCACACACTGCGACTGTGGCTGCTTATTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | TTTGTGACCTACAAACACCAACTGAATTTAAATGTTGGGTTTGGCCAGGTCCTTAATCGATCTGTCCACTaGCTTGCCTGGCTGTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVTYKHQLNLNVGFGQVLNRSVH*LAWLSS Trigger: GCTTGACAGCCAGGCAAGCAAGTGGACAGATCGATT...AAGGACCTGGCCAAACCCAACATTTAAATTCAGTTGGTGTTTGTAGGTCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047208.12 |
||
| CDS GCA 90 bp | GAAGAAAGTTCTTCTATTGGTTCCAGTATGTGTGAAGAGAACACTTaGTCATGTACCATGGTCAGGCTGGATGCACCATCCAGATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EESSSIGSSMCEENT*SCTMVRLDAPSRFC Trigger: ACAGAATCTGGATGGTGCATCCAGCCTGACCATGGTACATGAGCAAGTGTTCTCTTCACACATACTGGAACCAATAGAAGAACTTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTACAGTCCGTGTCACTTTaGACAGCGCTCTTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVQSVSL*TALFPK Trigger: CTTTGGAAAGAGCGCTGTCAAAAGTGACACGGACTG...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACATGTCGGTCTGGGCCTTaGTATTATACTCGAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTCRSGP*YYTRGE Trigger: CTCACCTCGAGTATAATACAAAGGCCCAGACCGACA...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACATTCTCGTCCTCCAGCTaGCAGAAGGTGATGTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTFSSSS*QKVMFI Trigger: TATGAACATCACCTTCTGCAAGCTGGAGGACGAGAA...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AAGAGTTTTTATGACTTAAAGGATACGTTGTTTTTACACAGTGGACAGCTGACAGTGACTAAGTTGCTCTaGAGTGTGCTCGGTTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSFYDLKDTLFLHSGQLTVTKLL*SVLGSF Trigger: AAACGAACCGAGCACACTCAAGAGCAACTTAGTCAC...TGTCAGCTGTCCACTGTGTAAAAACAACGTATCCTTTAAGTCATAAAAACTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS-3UTR CAA 90 bp | AGTTTGAAGAGACGACAGGATTGTTTTAACATAAGAACTACCAATGGGACAGTACTTAAGGTGCCTATGTaGGACTTGATCTGGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLKRRQDCFNIRTTNGTVLKVPM*DLIWML Trigger: TAACATCCAGATCAAGTCCAACATAGGCACCTTAAG...TACTGTCCCATTGGTAGTTCTTATGTTAAAACAATCCTGTCGTCTCTTCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | TCCCGAGGGTTCACTGGGCCCCAGGCCCTCTGCACCTaGGTGCAGCTGGGGTCCCGCTTGGCCGGAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRGFTGPQALCT*VQLGSRLAGGG Trigger: GCCGCCTCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCCAGTGAACCCTCGGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | TCACTGGGCCCCAGGCCCTCTGCACCTGGGTGCAGCTaGGGTCCCGCTTGGCCGGAGGCGGCTCCCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGPRPSAPGCS*GPAWPEAAPSA Trigger: AGCAGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCCAGTGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | GGACGTCCACGGCGCCGGCAACCTTGTCCACGTCGATaGCGCTCAGCCGCCTCCAGTCCACGCTCTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GRPRRRQPCPRR*RSAASSPRSPV Trigger: GACTGGAGAGCGTGGACTGGAGGCGGCTGAGCGCCATCGACGTGGACAAGGTTGCCGGCGCCGTGGACGTCC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | TTGAATTCCCGAGGGTTCACTGGGCCCCAGGCCCTCTaGACCTGGGTGCAGCTGGGGTCCCGCTTGGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LNSRGFTGPQAL*TWVQLGSRLAG Trigger: TCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCCAGTGAACCCTCGGGAATTCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 72 bp | TCCTGCAGTGTCAGGACGTCCACGGCGCCGGCAACCTaGTCCACGTCGATGGCGCTCAGCCGCCTCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSVRTSTAPAT*STSMALSRLQS Trigger: GGACTGGAGGCGGCTGAGCGCCATCGACGTGGACAAGGTTGCCGGCGCCGTGGACGTCCTGACACTGCAGGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | AGGCCCTCTGCACCTGGGTGCAGCTGGGGTCCCGCTTaGCCGGAGGCGGCTCCCTCTGCTCTATTTTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPSAPGCSWGPA*PEAAPSALFYS Trigger: GGAGTAAAATAGAGCAGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 72 bp | CAGGCCCTCTGCACCTGGGTGCAGCTGGGGTCCCGCTaGGCCGGAGGCGGCTCCCTCTGCTCTATTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: QALCTWVQLGSR*AGGGSLCSILL Trigger: GAGTAAAATAGAGCAGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | CGCCTATGGCAGAGGCGTCAGGCCCCTCGGGGCTGTTaGCCAGAGGGTAGTAGACGTGCTTCTGGAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLWQRRQAPRGC*PEGSRRASGRA Trigger: TGCCCTTCCAGAAGCACGTCTACTACCCTCTGGCCAACAGCCCCGAGGGGCCTGACGCCTCTGCCATAGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 90 bp | ATAATGTTCTCCTGCAGTGTCAGGACGTCCACGGCGCCGGCAACCTaGTCCACGTCGATGGCGCTCAGCCGCCTCCAGTCCACGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IMFSCSVRTSTAPAT*STSMALSRLQSTLS Trigger: GGAGAGCGTGGACTGGAGGCGGCTGAGCGCCATCGACGTGGACAAGGTTGCCGGCGCCGTGGACGTCCTGACACTGCAGGAGAACATTAT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 72 bp | CAGGCGGATCAGCTTCAGCAGCACTGGGTCTACCCCTaGCTGGCAGTGCGGGCACTTCTCGTCCTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QADQLQQHWVYP*LAVRALLVLQL Trigger: AAGCTGGAGGACGAGAAGTGCCCGCACTGCCAGTCAGGGGTAGACCCAGTGCTGCTGAAGCTGATCCGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | CGGATCAGCTTCAGCAGCACTGGGTCTACCCCTGACTaGCAGTGCGGGCACTTCTCGTCCTCCAGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RISFSSTGSTPD*QCGHFSSSSLQ Trigger: CTGCAAGCTGGAGGACGAGAAGTGCCCGCACTGCCAGTCAGGGGTAGACCCAGTGCTGCTGAAGCTGATCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | TTCCCCAGCTCCCGCTCCAGGTTAGTCCTCAGCTCCTaGGGGGATGGGCTGGTGCTCGACGGTTTCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: FPSSRSRLVLSS*GDGLVLDGFLK Trigger: CTTAAGGAAACCGTCGAGCACCAGCCCATCCCCCCAGGAGCTGAGGACTAACCTGGAGCGGGAGCTGGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | CCATGGTCAGGCTGGATGCACCATCCAGATTCTGTGTaGCCGAGGCAGTCATGGGTGTGGTTGGTGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PWSGWMHHPDSV*PRQSWVWLVQP Trigger: CGGCTGCACCAACCACACCCATGACTGCCTCGGCCACACAGAATCTGGATGGTGCATCCAGCCTGACCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | ATGAAGTCCTTCTTCCTTGAATTCCCGAGGGTTCACTaGGCCCCAGGCCCTCTGCACCTGGGTGCAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MKSFFLEFPRVH*APGPLHLGAAG Trigger: CCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCCAGTGAACCCTCGGGAATTCAAGGAAGAAGGACTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 72 bp | GGCGCAGCCTCTCCTCCACCAGGTTTAGCTGCGAGGTaGGGAACTCCTGCGAGTGCATCAGGTATTCGATCG | + |
|
Preference number: 6 (lower is better) Translates to: GAASPPPGLAAR*GTPASASGIRS Trigger: CGATCGAATACCTGATGCACTCGCAGGAGTTCCTCACCTCGCAGCTAAACCTGGTGGAGGAGAGGCTGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 72 bp | GCTGCTTTTAGGTGGCTGTGTGGCAGCGGTGGCAAGTaGGTCTGGGGAGAGGTAAGCATGGAGGAGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAFRWLCGSGGK*VWGEVSMEEVL Trigger: GAGGACCTCCTCCATGCTTACCTCTCCCCAGACTCACTTGCCACCGCTGCCACACAGCCACCTAAAAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | AGGCTCAGGCGCAGCCTCTCCTCCACCAGGTTTAGCTaGGAGGTGAGGAACTCCTGCGAGTGCATCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RLRRSLSSTRFS*EVRNSCECIRY Trigger: ATACCTGATGCACTCGCAGGAGTTCCTCACCTCGCAGCTAAACCTGGTGGAGGAGAGGCTGCGCCTGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | AACTCCTGCGAGTGCATCAGGTATTCGATCGTGAGCTaGGCCAGGCGGATCAGCTTCAGCAGCACTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSCECIRYSIVS*ARRISFSSTGS Trigger: AGACCCAGTGCTGCTGAAGCTGATCCGCCTGGCGCAGCTCACGATCGAATACCTGATGCACTCGCAGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | GTGGGGAAGCTGGGTTGCCTTGGGTACTTCTTCGGGTaGAAAGGTGGTCATGGAAGGGACATGGTGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGKLGCLGYFFG*KGGHGRDMVPV Trigger: GACAGGCACCATGTCCCTTCCATGACCACCTTTCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | TGGGGAGAGGTAAGCATGGAGGAGGTCCTCTTCATCTaGCTCCTCTTCCGAGCTGAAGGGAGGCGTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WGEVSMEEVLFI*LLFRAEGRRLG Trigger: ACCAAGACGCCTCCCTTCAGCTCGGAAGAGGAGCCAGATGAAGAGGACCTCCTCCATGCTTACCTCTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 90 bp | GGGTCTACCCCTGACTGGCAGTGCGGGCACTTCTCGTCCTCCAGCTaGCAGAAGGTGATGTTCATAATGTTCTCCTGCAGTGTCAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GSTPDWQCGHFSSSS*QKVMFIMFSCSVRT Trigger: CGTCCTGACACTGCAGGAGAACATTATGAACATCACCTTCTGCAAGCTGGAGGACGAGAAGTGCCCGCACTGCCAGTCAGGGGTAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 72 bp | GTGTGCTCGGTTCGTTTTCATGAAGTCCTTCTTCCTTaGATTCCCGAGGGTTCACTGGGCCCCAGGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VCSVRFHEVLLP*IPEGSLGPRPS Trigger: AGAGGGCCTGGGGCCCAGTGAACCCTCGGGAATTCAAGGAAGAAGGACTTCATGAAAACGAACCGAGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | TCCAGCTTGCAGAAGGTGATGTTCATAATGTTCTCCTaGAGTGTCAGGACGTCCACGGCGCCGGCAACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLQKVMFIMFS*SVRTSTAPATL Trigger: CAAGGTTGCCGGCGCCGTGGACGTCCTGACACTGCAGGAGAACATTATGAACATCACCTTCTGCAAGCTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | GCTGGGTTGCCTTGGGTACTTCTTCGGGTGGAAAGGTaGTCATGGAAGGGACATGGTGCCTGTCTGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGLPWVLLRVER*SWKGHGACLKR Trigger: TCTCTTCAGACAGGCACCATGTCCCTTCCATGACCACCTTTCCACCCGAAGAAGTACCCAAGGCAACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | CCAACGGTCTGCTTTTGTGGGGAAGCTGGGTTGCCTTaGGTACTTCTTCGGGTGGAAAGGTGGTCATGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PTVCFCGEAGLP*VLLRVERWSWK Trigger: CTTCCATGACCACCTTTCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCACAAAAGCAGACCGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | TCTGACCAACGGTCTGCTTTTGTGGGGAAGCTGGGTTaGCTTGGGTACTTCTTCGGGTGGAAAGGTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SDQRSAFVGKLG*LGYFFGWKGGH Trigger: ATGACCACCTTTCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCACAAAAGCAGACCGTTGGTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | TTGCTTGCCTGGCTGTCAAGCAGCTGTAGCATGTTCTaGAAGTCCTGGGGACACGGAAGATGGTCTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLAWLSSSCSMF*KSWGHGRWSSL Trigger: GAGAGAAGACCATCTTCCGTGTCCCCAGGACTTCCAGAACATGCTACAGCTGCTTGACAGCCAGGCAAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | ATAGTCCTTAGAGAAGCGAACTGCATGAGAGTGCTGTaGAGACTCCAGCTGAGACCTAGTGAGCTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IVLREANCMRVL*RLQLRPSELQL Trigger: CAGCTGCAGCTCACTAGGTCTCAGCTGGAGTCTGCACAGCACTCTCATGCAGTTCGCTTCTCTAAGGACTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | TTGCCTTGGGTACTTCTTCGGGTGGAAAGGTGGTCATaGAAGGGACATGGTGCCTGTCTGAAGAGAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LPWVLLRVERWS*KGHGACLKRVT Trigger: TGTCACTCTCTTCAGACAGGCACCATGTCCCTTCCATGACCACCTTTCCACCCGAAGAAGTACCCAAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | AACACAGTTCTCTGTCTGACCAACGGTCTGCTTTTGTaGGGAAGCTGGGTTGCCTTGGGTACTTCTTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: NTVLCLTNGLLL*GSWVALGTSSG Trigger: ACCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCACAAAAGCAGACCGTTGGTCAGACAGAGAACTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 90 bp | GGACAGGAGCTGCCCCTTTTCCTTGCTGTGTTCTTCGTTGAGAACTaGAAATCGATCTGTCCACTTGCTTGCCTGGCTGTCAAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQELPLFLAVFFVEN*KSICPLACLAVKQL Trigger: CAGCTGCTTGACAGCCAGGCAAGCAAGTGGACAGATCGATTTCAAGTTCTCAACGAAGAACACAGCAAGGAAAAGGGGCAGCTCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | ACTTCTTCGGGTGGAAAGGTGGTCATGGAAGGGACATaGTGCCTGTCTGAAGAGAGTGACACTTTTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSSGGKVVMEGT*CLSEESDTFSS Trigger: GGAGGAAAAAGTGTCACTCTCTTCAGACAGGCACCATGTCCCTTCCATGACCACCTTTCCACCCGAAGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | GGGTTCATTCCCGGCACTGCTTTATTCCCACTTCCTTaGGGTAAAGCCATGGTCTCAACAGTGTCAGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GFIPGTALFPLP*GKAMVSTVSVC Trigger: ACAGACTGACACTGTTGAGACCATGGCTTTACCCCAAGGAAGTGGGAATAAAGCAGTGCCGGGAATGAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 72 bp | CCATTTCACTTCCCTCCGTCCAGTCCGTGTCACTTTTaGCAGCGCTCTTTCCAAAGTGACTCATGCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PFHFPPSSPCHF*QRSFQSDSCCF Trigger: AAAGCAGCATGAGTCACTTTGGAAAGAGCGCTGTCAAAAGTGACACGGACTGGACGGAGGGAAGTGAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | AGTGACACTTTTTCCTCCATCTTACAGATCAGCTGGTaGTCGAGGGATTCTCGGATTTGCTGGATGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SDTFSSILQISW*SRDSRICWMSG Trigger: GCCTGACATCCAGCAAATCCGAGAATCCCTCGAGCACCAGCTGATCTGTAAGATGGAGGAAAAAGTGTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | AGCTGCAGCTGTTCCTTCAACATGTCAATCTCCTTCTaGAGCCTGTCGGTCTGGGCCTTTGTATTATACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SCSCSFNMSISF*SLSVWAFVLYS Trigger: CGAGTATAATACAAAGGCCCAGACCGACAGGCTCCAGAAGGAGATTGACATGTTGAAGGAACAGCTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | TGTAGCATGTTCTGGAAGTCCTGGGGACACGGAAGATaGTCTTCTCTCAGCTCAGTAACGTCTCTTAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSMFWKSWGHGR*SSLSSVTSLKV Trigger: CACCTTAAGAGACGTTACTGAGCTGAGAGAAGACCATCTTCCGTGTCCCCAGGACTTCCAGAACATGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | CAGATCAGCTGGTGCTCGAGGGATTCTCGGATTTGCTaGATGTCAGGCATTTGTTTTGCTAGGTCATGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QISWCSRDSRIC*MSGICFARSCL Trigger: CAGACATGACCTAGCAAAACAAATGCCTGACATCCAGCAAATCCGAGAATCCCTCGAGCACCAGCTGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 72 bp | TGTCAATCTCCTTCTGGAGCCTGTCGGTCTGGGCCTTaGTATTATACTCGAGGTGAGAGTCTTCAGTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: CQSPSGACRSGP*YYTRGESLQYG Trigger: GCCATACTGAAGACTCTCACCTCGAGTATAATACAAAGGCCCAGACCGACAGGCTCCAGAAGGAGATTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 72 bp | CTGCCCCTTTTCCTTGCTGTGTTCTTCGTTGAGAACTaGAAATCGATCTGTCCACTTGCTTGCCTGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPLFLAVFFVEN*KSICPLACLAV Trigger: GACAGCCAGGCAAGCAAGTGGACAGATCGATTTCAAGTTCTCAACGAAGAACACAGCAAGGAAAAGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | ATTGAGCTTCGAAGCTTCTCTATGTGGGACAGGAGCTaGCCCTTTTCCTTGCTGTGTTCTTCGTTGAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: IELRSFSMWDRS*PFSLLCSSLRT Trigger: AGTTCTCAACGAAGAACACAGCAAGGAAAAGGGGCAGCTCCTGTCCCACATAGAGAAGCTTCGAAGCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | GAGAGTGACACTTTTTCCTCCATCTTACAGATCAGCTaGTGCTCGAGGGATTCTCGGATTTGCTGGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ESDTFSSILQIS*CSRDSRICWMS Trigger: TGACATCCAGCAAATCCGAGAATCCCTCGAGCACCAGCTGATCTGTAAGATGGAGGAAAAAGTGTCACTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 90 bp | CCCGCCTCTTGTAGAAGACATTATCTGCACTTAAATCCTTCATCATaGAGCTTCGAAGCTTCTCTATGTGGGACAGGAGCTGCCCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PASCRRHYLHLNPSS*SFEASLCGTGAAPF Trigger: AAAAGGGGCAGCTCCTGTCCCACATAGAGAAGCTTCGAAGCTCAATGATGAAGGATTTAAGTGCAGATAATGTCTTCTACAAGAGGCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | TTACAGATCAGCTGGTGCTCGAGGGATTCTCGGATTTaGTGGATGTCAGGCATTTGTTTTGCTAGGTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LQISWCSRDSRI*WMSGICFARSC Trigger: ACATGACCTAGCAAAACAAATGCCTGACATCCAGCAAATCCGAGAATCCCTCGAGCACCAGCTGATCTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | AAATCCTTCATCATTGAGCTTCGAAGCTTCTCTATGTaGGACAGGAGCTGCCCCTTTTCCTTGCTGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KSFIIELRSFSM*DRSCPFSLLCS Trigger: AGAACACAGCAAGGAAAAGGGGCAGCTCCTGTCCCACATAGAGAAGCTTCGAAGCTCAATGATGAAGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CCA 72 bp | CTCCTCTTCCGAGCTGAAGGGAGGCGTCTTGGTGGATaGAAACCTTCTGAGAAAATGACTTTCTTTGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LLFRAEGRRLGG*KPSEKMTFFGI Trigger: AATACCAAAGAAAGTCATTTTCTCAGAAGGTTTCCATCCACCAAGACGCCTCCCTTCAGCTCGGAAGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS TCA 72 bp | ACTAAGTTGCTCTTGAGTGTGCTCGGTTCGTTTTCATaGAGTCCTTCTTCCTTGAATTCCCGAGGGTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: TKLLLSVLGSFS*SPSSLNSRGFT Trigger: AGTGAACCCTCGGGAATTCAAGGAAGAAGGACTTCATGAAAACGAACCGAGCACACTCAAGAGCAACTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS GCA 72 bp | TCAGGCATTTGTTTTGCTAGGTCATGTCTGGCAACTTaGATGGCTTTAAGCGATCTATTCAAGATCTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGICFARSCLAT*MALSDLFKISH Trigger: GTGCGAGATCTTGAATAGATCGCTTAAAGCCATGCAAGTTGCCAGACATGACCTAGCAAAACAAATGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 90 bp | GCTCATTTTCTCGACCTTTTTCCTCCTCTGAAGAAAGTTCTTCTATaGGTTCCAGTATGTGTGAAGAGAACACTTGCTCATGTACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: AHFLDLFPPLKKVLL*VPVCVKRTLAHVPW Trigger: CCATGGTACATGAGCAAGTGTTCTCTTCACACATACTGGAACCAATAGAAGAACTTTCTTCAGAGGAGGAAAAAGGTCGAGAAAATGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 72 bp | TCTCTCAGCTCAGTAACGTCTCTTAAGGTGCCTATGTaGGACTTGATCTGGATGTTAGACTTCTGTATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSSVTSLKVPM*DLIWMLDFCIS Trigger: AGAAATACAGAAGTCTAACATCCAGATCAAGTCCAACATAGGCACCTTAAGAGACGTTACTGAGCTGAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 72 bp | CTCGACCTTTTTCCTCCTCTGAAGAAAGTTCTTCTATaGGTTCCAGTATGTGTGAAGAGAACACTTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LDLFPPLKKVLL*VPVCVKRTLAH Trigger: ATGAGCAAGTGTTCTCTTCACACATACTGGAACCAATAGAAGAACTTTCTTCAGAGGAGGAAAAAGGTCGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||
| CDS CAA 72 bp | AGCTCAGTAACGTCTCTTAAGGTGCCTATGTTGGACTaGATCTGGATGTTAGACTTCTGTATTTCTAACAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSVTSLKVPMLD*IWMLDFCISNN Trigger: GTTGTTAGAAATACAGAAGTCTAACATCCAGATCAAGTCCAACATAGGCACCTTAAGAGACGTTACTGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004055.10 ENSMUST00000047208.12 |
||