Pregenerated sensors for DYTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069085Ensembl transcript IDs: ENSMUST00000090313.5
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTGCAGGCGATGGCCTTTaGCACAGGACTCCGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNISSYPPLQPFRDTMKAAGDGL*HRTPVA Trigger: AGCCACCGGAGTCCTGTGTCAAAGGCCATCGCCTGC...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTCCGGTGCTCTTGGGTaGACTTGGGCTGCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNISSYPPLQPFRDTMKASGALG*TWAAFP Trigger: GGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGA...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | GAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGAAGGCCCTGCACACCTaGTGGGCTCTACCATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENNQNISSYPPLQPFRDTKALHT*WALPYS Trigger: GCTGTATGGTAGAGCCCAGCAGGTGTGCAGGGCCTT...CGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAGCTGCTGCACAGAAATaGAGGTCTCTGTGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKAAAQK*RSLCSP Trigger: GGGAGAGCACAGAGACCTCCATTTCTGTGCAGCAGC...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAACGCCATAGAACCTGCTaGATCAGGAAGCTGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKRHRTC*IRKLSI Trigger: GATGGACAGCTTCCTGATTCAGCAGGTTCTATGGCG...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTGACTGTTTCCGCGGCTaGCAGGCGGTAGCAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFDCFRG*QAVASW Trigger: CCAACTTGCTACCGCCTGTCAGCCGCGGAAACAGTC...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGGACAGAGAAGGCCCTaGACACCTGCTGGGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VKENNQNISSYPPLQPFRGQRRP*TPAGLY Trigger: GTAGAGCCCAGCAGGTGTGCAGGGCCTTCTCTGTCC...TCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | GAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGGCTCTTGGGTGCACTTaGGCTGCATTTCCCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENNQNISSYPPLQPFRDTALGCT*AAFPIP Trigger: TGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGC...CGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTTAGGACATTTATACTaGAGGCAAAGCCTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNISSYPPLQPFRDTMKALGHLY*RQSLAG Trigger: GCCAGCCAGGCTTTGCCTTCAGTATAAATGTCCTAA...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAACACCAAGGGGCCTTTaGGTCTGGATTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKTPRGL*VWILLH Trigger: GTGAAGAAGAATCCAGACTCAAAGGCCCCTTGGTGT...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAGAAGGATGGAGTGGCTaGAACATTGCCTGTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKEGWSG*NIACRS Trigger: AGACCTACAGGCAATGTTGCAGCCACTCCATCCTTC...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTGAGCTCCGGTGCTCTTaGGTGCACTTGGGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFELRCS*VHLGCI Trigger: AATGCAGCCCAAGTGCACCCAAGAGCACCGGAGCTC...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTCAGGCGGTAGCAAGTTaGGAGCCACAAGAGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFQAVAS*EPQEDQ Trigger: CTGGTCCTCTTGTGGCTCCCAACTTGCTACCGCCTG...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTGACACAGGACTCCGGTaGCTGCTGTTTCCACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFDTGLR*LLFPLL Trigger: GAGCAGTGGAAACAGCAGCCACCGGAGTCCTGTGTC...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAGGAGAAGAAGAAGGATaGAGTGGCTGCAACATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKGEEEG*SGCNIA Trigger: GGCAATGTTGCAGCCACTCCATCCTTCTTCTTCTCC...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAAGCTCCCGGAGCTCCTaGAAAAGCTGCTGCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKENNQNISSYPPLQPFRSSRSS*KSCCTE Trigger: TTCTGTGCAGCAGCTTTTTCAGGAGCTCCGGGAGCT...TCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTGAAATTTCTCTTCCTTaGTTCCAGAGCTCAACACCC | + |
|
Preference number: 4 (lower is better) Translates to: QNISSYPPLQPFRDTMKAEISLP*FQSSTP Trigger: GGGTGTTGAGCTCTGGAATCAAGGAAGAGAAATTTC...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTGTATTCTCTGTTGCTaGCATCTGGACACATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNISSYPPLQPFRDTMKACILCC*HLDTFL Trigger: GAGGAATGTGTCCAGATGTCAGCAACAGAGAATACA...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAATTGGATGCTGTGGTTTaGGGAGAAGAAGAAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKLDAVV*GEEEGW Trigger: CCATCCTTCTTCTTCTCCTCAAACCACAGCATCCAA...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTAGAGTGTCCTGCTGGTaGGCAGATGGGGAACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSRVSCW*ADGELW Trigger: CCATAGTTCCCCATCTGCTCACCAGCAGGACACTCT...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCTCGGAAGCAGCTGTaGATAGCACTTTCCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RREVKENNQNISSYPPLQPRKQL*IALSTG Trigger: TCCCGTGGAAAGTGCTATCCACAGCTGCTTCCGAGG...TTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTCCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAACCCTCTGGCGTTTCTaGGGCAGGTTGTTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKENNQNISSYPPLQPFRTLWRF*GRLFLR Trigger: TCTCAGAAACAACCTGCCTCAGAAACGCCAGAGGGT...TCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAGCACAGATCGTAATTTaGAGGCTGTTCTATAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKAQIVI*RLFYRQ Trigger: CTGTCTATAGAACAGCCTTCAAATTACGATCTGTGC...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTGTGGGCAAGGTGATTTaGTCCACAAGGACAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFVGKVI*STRTEK Trigger: CTTCTCTGTCCTTGTGGATCAAATCACCTTGCCCAC...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTAAGGCATATGTGCCTTaGAATTTCTGCTTGTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: QNISSYPPLQPFRDTMKAKAYVP*NFCLYL Trigger: TAGGTACAAGCAGAAATTGCAAGGCACATATGCCTT...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTAGGTCTCGTCTCATCTaGTGTAGCTTGGTCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSRSRLI*CSLVHR Trigger: CCTATGGACCAAGCTACAGCAGATGAGACGAGACCT...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTCAGAGGCTCAGACTGTaGCCAAGACAGAAATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFQRLRL*PRQKFL Trigger: GAGAAATTTCTGTCTTGGGCACAGTCTGAGCCTCTG...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAGTGCCTTGCAATTTCTaGTTGTACCTATGTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKVPCNF*LYLCNC Trigger: ACAGTTACATAGGTACAAGCAGAAATTGCAAGGCAC...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAAGGCACTTTAGACAATaGTATCTCAGTCCTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKRHFRQ*YLSPMI Trigger: GATCATAGGACTGAGATACCATTGTCTAAAGTGCCT...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTTTCCCTGAACTTGCTTaGCATTTGTGCTTTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFFPELA*HLCFLS Trigger: GGACAGAAAGCACAAATGTCAAGCAAGTTCAGGGAA...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAATGTTTCCTAGTGCTTTaGAAAATGATCTCTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKCFLVL*KMISCG Trigger: ACCACAAGAGATCATTTTGCAAAGCACTAGGAAACA...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTTGTTCCTCTTTTCACTaGAGCTCTCCATCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSCSSFH*SSPSLS Trigger: GGAAAGAGATGGAGAGCTGCAGTGAAAAGAGGAACA...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTTCTGTTGCTGACATCTaGACACATTCCTCCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSSVADI*THSSIT Trigger: TGTGATGGAGGAATGTGTCCAGATGTCAGCAACAGA...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | GAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGAAGAATGGAAAATCTTaGATGCTGTGGTTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENNQNISSYPPLQPFRDTKNGKS*MLWFEE Trigger: CTCCTCAAACCACAGCATCCAAGATTTTCCATTCTT...CGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | GAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGGCTCAGCATCTTTTGTaGGTGATTTTGTTTCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENNQNISSYPPLQPFRDTAQHLL*VILFPS Trigger: ACTAGGAAACAAAATCACCCACAAAAGATGCTGAGC...CGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAAGCATCTTTTGTGGGTaGTTTTGTTTCCTAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKENNQNISSYPPLQPFRSIFCG*FCFLVL Trigger: AAGCACTAGGAAACAAAATCACCCACAAAAGATGCT...TCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAATGGAAAATCTTGGATaGTGTGGTTTGAGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKENNQNISSYPPLQPFRMENLG*CGLRRR Trigger: TCTTCTCCTCAAACCACAGCATCCAAGATTTTCCAT...TCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAAAAATCTTGGATGCTGTaGTTTGAGGAGAAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RREVKENNQNISSYPPLQKSWML*FEEKKK Trigger: CTTCTTCTTCTCCTCAAACCACAGCATCCAAGATTT...TTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTCCCTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAACGTTTAAGAATACCTaGTCCTGTTCTGTCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VKENNQNISSYPPLQPFRTFKNT*SCSVKH Trigger: ATGTTTGACAGAACAGGATCAGGTATTCTTAAACGT...TCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAATCATCTGGTAAAGAATaGAAAATCTTGGATGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RREVKENNQNISSYPPLQSSGKE*KILDAV Trigger: CACAGCATCCAAGATTTTCCATTCTTTACCAGATGA...TTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTCCCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR GCA 90 bp | GAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTTCTTTGTTTCAAATCTaGAGTTCTGTTCTTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVKENNQNISSYPPLQPFSLFQI*SSVLPV Trigger: TACAGGAAGAACAGAACTGCAGATTTGAAACAAAGA...AAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 90 bp | CAAAGCCTGGCTGGCCCGTGGCTAGCTGAGTCCCTTGAAGCCAGCTaGTCCAGCAGCCACTGTCTCCCCACAGCTCCTACCCTCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QSLAGPWLAESLEAS*SSSHCLPTAPTLWR Trigger: ACGCCAGAGGGTAGGAGCTGTGGGGAGACAGTGGCTGCTGGACCAGCTGGCTTCAAGGGACTCAGCTAGCCACGGGCCAGCCAGGCTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 90 bp | GAGAAGACTCAGGGTGAGCTCCGGTGCTCTTGGGTGCACTTGGGCTaGATTTCCCATCCCAGTGCGCTGAAACAGCTCCCGGAGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EKTQGELRCSWVHLG*ISHPSALKQLPELL Trigger: CAGGAGCTCCGGGAGCTGTTTCAGCGCACTGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGAGCTCACCCTGAGTCTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 90 bp | GCTCCGGTGCTCTTGGGTGCACTTGGGCTGCATTTCCCATCCCAGTaGGCTGAAACAGCTCCCGGAGCTCCTGAAAAAGCTGCTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: APVLLGALGLHFPSQ*AETAPGAPEKAAAQ Trigger: CTGTGCAGCAGCTTTTTCAGGAGCTCCGGGAGCTGTTTCAGCGCACTGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 90 bp | TGTTCTGTCAAACATGGCCATGAGAAGACTCAGGGTGAGCTCCGGTaGTCTTGGGTGCACTTGGGCTGCATTTCCCATCCCAGTGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSVKHGHEKTQGELR*SWVHLGCISHPSAL Trigger: CAGCGCACTGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGAGCTCACCCTGAGTCTTCTCATGGCCATGTTTGACAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 90 bp | GTCAAACATGGCCATGAGAAGACTCAGGGTGAGCTCCGGTGCTCTTaGGTGCACTTGGGCTGCATTTCCCATCCCAGTGCGCTGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: VKHGHEKTQGELRCS*VHLGCISHPSALKQ Trigger: CTGTTTCAGCGCACTGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGAGCTCACCCTGAGTCTTCTCATGGCCATGTTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 90 bp | GCTGAAACAGCTCCCGGAGCTCCTGAAAAAGCTGCTGCACAGAAATaGAGGTCTCTGTGCTCTCCCCAGAACGTCCACGCCATAGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: AETAPGAPEKAAAQK*RSLCSPQNVHAIEP Trigger: AGGTTCTATGGCGTGGACGTTCTGGGGAGAGCACAGAGACCTCCATTTCTGTGCAGCAGCTTTTTCAGGAGCTCCGGGAGCTGTTTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 90 bp | AGAGGGCTGTCCCCCGAGAGGGCAACCAGTGCAGCAGCCACAGGTTaGCGTTTAAGAATACCTGATCCTGTTCTGTCAAACATGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RGLSPERATSAAATG*RLRIPDPVLSNMAM Trigger: CATGGCCATGTTTGACAGAACAGGATCAGGTATTCTTAAACGTCAACCTGTGGCTGCTGCACTGGTTGCCCTCTCGGGGGACAGCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 90 bp | GCTCTTCTTGAGCTTGCATACCCTGGGGCTTTAGGACATTTATACTaGAGGCAAAGCCTGGCTGGCCCGTGGCTAGCTGAGTCCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALLELAYPGALGHLY*RQSLAGPWLAESLE Trigger: TTCAAGGGACTCAGCTAGCCACGGGCCAGCCAGGCTTTGCCTTCAGTATAAATGTCCTAAAGCCCCAGGGTATGCAAGCTCAAGAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 90 bp | GAGGGCAACCAGTGCAGCAGCCACAGGTTGACGTTTAAGAATACCTaGTCCTGTTCTGTCAAACATGGCCATGAGAAGACTCAGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGNQCSSHRLTFKNT*SCSVKHGHEKTQGE Trigger: CTCACCCTGAGTCTTCTCATGGCCATGTTTGACAGAACAGGATCAGGTATTCTTAAACGTCAACCTGTGGCTGCTGCACTGGTTGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 90 bp | CCTTTGACACAGGACTCCGGTGGCTGCTGTTTCCACTGCTCTTCTTaGGCTTGCATACCCTGGGGCTTTAGGACATTTATACTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLTQDSGGCCFHCSS*ACIPWGFRTFILKA Trigger: TGCCTTCAGTATAAATGTCCTAAAGCCCCAGGGTATGCAAGCTCAAGAAGAGCAGTGGAAACAGCAGCCACCGGAGTCCTGTGTCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 90 bp | GAAGGATGGAGTGGCTGCAACATTGCCTGTAGGTCTCGTCTCATCTaGTGTAGCTTGGTCCATAGGTTATCTTGGTTGGTTGTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGWSGCNIACRSRLI*CSLVHRLSWLVVSS Trigger: GGAGCTCACAACCAACCAAGATAACCTATGGACCAAGCTACAGCAGATGAGACGAGACCTACAGGCAATGTTGCAGCCACTCCATCCTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 90 bp | ACAGTGCTTGTAGCTCCTCATCTTCCAGGTTGTTCCTCTTTTCACTaGAGCTCTCCATCTCTTTCCCTGCTGAAAGTGTTTGAGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TVLVAPHLPGCSSFH*SSPSLSLLKVFEQG Trigger: TCCCTGCTCAAACACTTTCAGCAGGGAAAGAGATGGAGAGCTGCAGTGAAAAGAGGAACAACCTGGAAGATGAGGAGCTACAAGCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 90 bp | CACCTCCTCTCCGTATGCCATCATCTGGTAAAGAATGGAAAATCTTaGATGCTGTGGTTTGAGGAGAAGAAGAAGGATGGAGTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLLSVCHHLVKNGKS*MLWFEEKKKDGVAA Trigger: TGCAGCCACTCCATCCTTCTTCTTCTCCTCAAACCACAGCATCCAAGATTTTCCATTCTTTACCAGATGATGGCATACGGAGAGGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 90 bp | TACTTCAGTAGGAGGAATCTGGAGAGTGTCCTGCTGGTGAGCAGATaGGGAACTATGGACTTTGCTCAGCATCTTTTGTGGGTGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFSRRNLESVLLVSR*GTMDFAQHLLWVIL Trigger: CAAAATCACCCACAAAAGATGCTGAGCAAAGTCCATAGTTCCCCATCTGCTCACCAGCAGGACACTCTCCAGATTCCTCCTACTGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTGGAGTGGCTGCAACATaGCCTGTAGGTCTCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QNISSYPPLQPFRDTMKAGVAAT*PVGLVS Trigger: TGAGACGAGACCTACAGGCAATGTTGCAGCCACTCC...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | GAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGTGCTCTTGGGTGCACTaGGGCTGCATTTCCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: ENNQNISSYPPLQPFRDTCSWVH*GCISHP Trigger: GGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCA...CGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 90 bp | ATGCCATCATCTGGTAAAGAATGGAAAATCTTGGATGCTGTGGTTTaGGGAGAAGAAGAAGGATGGAGTGGCTGCAACATTGCCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: MPSSGKEWKILDAVV*GEEEGWSGCNIACR Trigger: CCTACAGGCAATGTTGCAGCCACTCCATCCTTCTTCTTCTCCTCAAACCACAGCATCCAAGATTTTCCATTCTTTACCAGATGATGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 90 bp | TGTAGGTCTCGTCTCATCTGCTGTAGCTTGGTCCATAGGTTATCTTaGTTGGTTGTGAGCTCCCGAATCTTTGTTTCAAATCTGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CRSRLICCSLVHRLS*LVVSSRIFVSNLQF Trigger: GAACTGCAGATTTGAAACAAAGATTCGGGAGCTCACAACCAACCAAGATAACCTATGGACCAAGCTACAGCAGATGAGACGAGACCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTGCTTTCTGTCCACCTaGGCAGAGTTAGGAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QNISSYPPLQPFRDTMKACFLST*AELGSS Trigger: ACTGCTTCCTAACTCTGCCAAGGTGGACAGAAAGCA...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 90 bp | GTCTCATCTGCTGTAGCTTGGTCCATAGGTTATCTTGGTTGGTTGTaGGCTCCCGAATCTTTGTTTCAAATCTGCAGTTCTGTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSAVAWSIGYLGWL*APESLFQICSSVLP Trigger: AGGAAGAACAGAACTGCAGATTTGAAACAAAGATTCGGGAGCTCACAACCAACCAAGATAACCTATGGACCAAGCTACAGCAGATGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 90 bp | CTGCAGTTCTGTTCTTCCTGTAAGGCATATGTGCCTTGCAATTTCTaGTTGTACCTATGTAACTGTTTCCTAAGGAGCCTTCTTTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQFCSSCKAYVPCNF*LYLCNCFLRSLLSL Trigger: CAGGGAAAGAAGGCTCCTTAGGAAACAGTTACATAGGTACAAGCAGAAATTGCAAGGCACATATGCCTTACAGGAAGAACAGAACTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTCTTGGATGCTGTGGTTaGAGGAGAAGAAGAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QNISSYPPLQPFRDTMKALGCCG*RRRRRM Trigger: CATCCTTCTTCTTCTCCTCAAACCACAGCATCCAAG...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAAGTCCATCAAGTCCAATaGGCAAAGAGTTTGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKVHQVQ*AKSLHR Trigger: TCTGTGCAAACTCTTTGCCAATTGGACTTGATGGAC...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | GTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGATCCCTAGTGACCCTCTaGATGTGGGAAGAGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VKENNQNISSYPPLQPFRSLVTL*MWEESP Trigger: AGGTGACTCTTCCCACATCAAGAGGGTCACTAGGGA...TCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 90 bp | GTTTCAAATCTGCAGTTCTGTTCTTCCTGTAAGGCATATGTGCCTTaGAATTTCTGCTTGTACCTATGTAACTGTTTCCTAAGGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSNLQFCSSCKAYVP*NFCLYLCNCFLRSL Trigger: AAGGCTCCTTAGGAAACAGTTACATAGGTACAAGCAGAAATTGCAAGGCACATATGCCTTACAGGAAGAACAGAACTGCAGATTTGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTCTTTTGTGGGTGATTTaGTTTCCTAGTGCTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QNISSYPPLQPFRDTMKALLWVI*FPSALQ Trigger: TTGCAAAGCACTAGGAAACAAAATCACCCACAAAAG...AGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTCACACCAAGGGGCCTTaGAGTCTGGATTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSHTKGP*SLDSSS Trigger: TGAAGAAGAATCCAGACTCAAAGGCCCCTTGGTGTG...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTCATAGGTTATCTTGGTaGGTTGTGAGCTCCCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSHRLSW*VVSSRI Trigger: GATTCGGGAGCTCACAACCAACCAAGATAACCTATG...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | TCGTACCCTCCACTTCAACCCTTTAGAGATACGATGAAGGCTTACTTCTTTAAATTGTTTCCTAGTGCTTaGCAAAATGATCTCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYPPLQPFRDTMKAYFFKLFPSA*QNDLLW Trigger: CCACAAGAGATCATTTTGCAAAGCACTAGGAAACAA...TTTAAAGAAGTAAGCCTTCATCGTATCTCTAAAGGGTTGAAGTGGAGGGTACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGAAGTTAAAGAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAAGAGCTTTCCCTGAACTaGCTTGACATTTGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RREVKENNQNISSYPPLQELSLN*LDICAF Trigger: GAAAGCACAAATGTCAAGCAAGTTCAGGGAAAGCTC...TTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTCTTTAACTTCCCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | GAAAATAACCAAAACATAAGTTCGTACCCTCCACTTCAACCCTTTAGAGATACGTTTGCTCAGCATCTTTaGTGGGTGATTTTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ENNQNISSYPPLQPFRDTFAQHL*WVILFP Trigger: AGGAAACAAAATCACCCACAAAAGATGCTGAGCAAA...CGTATCTCTAAAGGGTTGAAGTGGAGGGTACGAACTTATGTTTTGGTTATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTAGAAATTTCTCTTCCTaGATTCCAGAGCTCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSRNFSS*IPELNT Trigger: GGTGTTGAGCTCTGGAATCAAGGAAGAGAAATTTCT...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS-3UTR CAA 90 bp | CACCCTCAAAGTTTTATTCAATATAAAGGAACTAAGATAGCTGAGAAGGGAAGTGTTTTGTATTCTCTGTaGCTGACATCTGGACACATT | + |
|
Preference number: 5 (lower is better) Translates to: HPQSFIQYKGTKIAEKGSVLYSL*LTSGHI Trigger: AATGTGTCCAGATGTCAGCAACAGAGAATACAAAAC...ACTTCCCTTCTCAGCTATCTTAGTTCCTTTATATTGAATAAAACTTTGAGGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 72 bp | CAGGGTGAGCTCCGGTGCTCTTGGGTGCACTTGGGCTaGATTTCCCATCCCAGTGCGCTGAAACAGCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QGELRCSWVHLG*ISHPSALKQLP Trigger: CGGGAGCTGTTTCAGCGCACTGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGAGCTCACCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 90 bp | GGCCATGAGAAGACTCAGGGTGAGCTCCGGTGCTCTTGGGTGCACTaGGGCTGCATTTCCCATCCCAGTGCGCTGAAACAGCTCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHEKTQGELRCSWVH*GCISHPSALKQLPE Trigger: CTCCGGGAGCTGTTTCAGCGCACTGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGAGCTCACCCTGAGTCTTCTCATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | GGAAGGTTCTGCAGACACTGCACCGCACAGGGTGAGTaGCTGTTTCCGCGGCTGACAGGCGGTAGCAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GRFCRHCTAQGE*LFPRLTGGSKL Trigger: CAACTTGCTACCGCCTGTCAGCCGCGGAAACAGTCACTCACCCTGTGCGGTGCAGTGTCTGCAGAACCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | CCGGTTGTGATTCCCTTGCAGAGCAGGCGATGGCCTTaGACACAGGACTCCGGTGGCTGCTGTTTCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVVIPLQSRRWP*TQDSGGCCFHC Trigger: GCAGTGGAAACAGCAGCCACCGGAGTCCTGTGTCAAAGGCCATCGCCTGCTCTGCAAGGGAATCACAACCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 90 bp | GGGCTCTACCATACAGCTCCATGTCCATCAAAGGCTGCAGACCTGTaGGCGAGTCTAGGTCAAAGGCATCCAGGAGTCGGGGCAACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLYHTAPCPSKAADL*ASLGQRHPGVGATV Trigger: CACTGTTGCCCCGACTCCTGGATGCCTTTGACCTAGACTCGCCAACAGGTCTGCAGCCTTTGATGGACATGGAGCTGTATGGTAGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 72 bp | CTCTTGGGTGCACTTGGGCTGCATTTCCCATCCCAGTaGGCTGAAACAGCTCCCGGAGCTCCTGAAAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGALGLHFPSQ*AETAPGAPEKA Trigger: AGCTTTTTCAGGAGCTCCGGGAGCTGTTTCAGCGCACTGGGATGGGAAATGCAGCCCAAGTGCACCCAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 72 bp | AAACATGGCCATGAGAAGACTCAGGGTGAGCTCCGGTaGTCTTGGGTGCACTTGGGCTGCATTTCCCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: KHGHEKTQGELR*SWVHLGCISHP Trigger: GGGATGGGAAATGCAGCCCAAGTGCACCCAAGAGCACCGGAGCTCACCCTGAGTCTTCTCATGGCCATGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 72 bp | GCAGAGCAGGCGATGGCCTTTGACACAGGACTCCGGTaGCTGCTGTTTCCACTGCTCTTCTTGAGCTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AEQAMAFDTGLR*LLFPLLFLSLH Trigger: ATGCAAGCTCAAGAAGAGCAGTGGAAACAGCAGCCACCGGAGTCCTGTGTCAAAGGCCATCGCCTGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | GAGCTTGCATACCCTGGGGCTTTAGGACATTTATACTaGAGGCAAAGCCTGGCTGGCCCGTGGCTAGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ELAYPGALGHLY*RQSLAGPWLAE Trigger: CTCAGCTAGCCACGGGCCAGCCAGGCTTTGCCTTCAGTATAAATGTCCTAAAGCCCCAGGGTATGCAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | CATACAGCTCCATGTCCATCAAAGGCTGCAGACCTGTaGGCGAGTCTAGGTCAAAGGCATCCAGGAGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HTAPCPSKAADL*ASLGQRHPGVG Trigger: CCCGACTCCTGGATGCCTTTGACCTAGACTCGCCAACAGGTCTGCAGCCTTTGATGGACATGGAGCTGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | AGCAGTTCCCATTCTGGACCATCCCTAGTGACCCTCTaGATGTGGGAAGAGTCACCTCCTCTCCGTATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSHSGPSLVTL*MWEESPPLRMP Trigger: TGGCATACGGAGAGGAGGTGACTCTTCCCACATCAAGAGGGTCACTAGGGATGGTCCAGAATGGGAACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | GTGCTCTCCCCAGAACGTCCACGCCATAGAACCTGCTaGATCAGGAAGCTGTCCATCAAGTCCAATTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VLSPERPRHRTC*IRKLSIKSNWQ Trigger: TTGCCAATTGGACTTGATGGACAGCTTCCTGATTCAGCAGGTTCTATGGCGTGGACGTTCTGGGGAGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | GGCTCAGACTGTGCCCAAGACAGAAATTTCTCTTCCTaGATTCCAGAGCTCAACACCCCTCGGAAGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSDCAQDRNFSS*IPELNTPRKQL Trigger: CAGCTGCTTCCGAGGGGTGTTGAGCTCTGGAATCAAGGAAGAGAAATTTCTGTCTTGGGCACAGTCTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 90 bp | GAGTTAGGAAGCAGTTCCCATTCTGGACCATCCCTAGTGACCCTCTaGATGTGGGAAGAGTCACCTCCTCTCCGTATGCCATCATCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ELGSSSHSGPSLVTL*MWEESPPLRMPSSG Trigger: ACCAGATGATGGCATACGGAGAGGAGGTGACTCTTCCCACATCAAGAGGGTCACTAGGGATGGTCCAGAATGGGAACTGCTTCCTAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | AGTCCAGGCACTTTAGACAATGGTATCTCAGTCCTATaGTCGGGAAGGTTCTGCAGACACTGCACCGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SPGTLDNGISVL*SGRFCRHCTAQ Trigger: CTGTGCGGTGCAGTGTCTGCAGAACCTTCCCGATCATAGGACTGAGATACCATTGTCTAAAGTGCCTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | CAGGACTCCGGTGGCTGCTGTTTCCACTGCTCTTCTTaGGCTTGCATACCCTGGGGCTTTAGGACATTTATA | + |
|
Preference number: 6 (lower is better) Translates to: QDSGGCCFHCSS*ACIPWGFRTFI Trigger: TATAAATGTCCTAAAGCCCCAGGGTATGCAAGCTCAAGAAGAGCAGTGGAAACAGCAGCCACCGGAGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | ACTTCAGTAGGAGGAATCTGGAGAGTGTCCTGCTGGTaGGCAGATGGGGAACTATGGACTTTGCTCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TSVGGIWRVSCW*ADGELWTLLSI Trigger: GATGCTGAGCAAAGTCCATAGTTCCCCATCTGCTCACCAGCAGGACACTCTCCAGATTCCTCCTACTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 72 bp | AGGAGGAATCTGGAGAGTGTCCTGCTGGTGAGCAGATaGGGAACTATGGACTTTGCTCAGCATCTTTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRNLESVLLVSR*GTMDFAQHLLW Trigger: CCACAAAAGATGCTGAGCAAAGTCCATAGTTCCCCATCTGCTCACCAGCAGGACACTCTCCAGATTCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | CGGGGCAACAGTGCTTGTAGCTCCTCATCTTCCAGGTaGTTCCTCTTTTCACTGCAGCTCTCCATCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGNSACSSSSSR*FLFSLQLSISF Trigger: GAAAGAGATGGAGAGCTGCAGTGAAAAGAGGAACAACCTGGAAGATGAGGAGCTACAAGCACTGTTGCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | TCTGGATTCTTCTTCACTCCAAGTGGGCAAGGTGATTaGATCCACAAGGACAGAGAAGGCCCTGCACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGFFFTPSGQGD*IHKDREGPAHL Trigger: CAGGTGTGCAGGGCCTTCTCTGTCCTTGTGGATCAAATCACCTTGCCCACTTGGAGTGAAGAAGAATCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | TTTGAGGAGAAGAAGAAGGATGGAGTGGCTGCAACATaGCCTGTAGGTCTCGTCTCATCTGCTGTAGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FEEKKKDGVAAT*PVGLVSSAVAW Trigger: CCAAGCTACAGCAGATGAGACGAGACCTACAGGCAATGTTGCAGCCACTCCATCCTTCTTCTTCTCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 72 bp | GATCTGTTAGTAAGGCTCTCAAAACTCTTCGGGTCATaGGGGCTTGGGAATCATCGCCTCTCCTGTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DLLVRLSKLFGS*GLGNHRLSCSF Trigger: AAAAGAACAGGAGAGGCGATGATTCCCAAGCCCGCATGACCCGAAGAGTTTTGAGAGCCTTACTAACAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 72 bp | AGTGGCTGCAACATTGCCTGTAGGTCTCGTCTCATCTaGTGTAGCTTGGTCCATAGGTTATCTTGGTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SGCNIACRSRLI*CSLVHRLSWLV Trigger: AACCAACCAAGATAACCTATGGACCAAGCTACAGCAGATGAGACGAGACCTACAGGCAATGTTGCAGCCACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | TGTTTCCTAAGGAGCCTTCTTTCCCTGAGCAGAGTGTaGAGAGAGTCACGAGTCCTCCACAGCTCATTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: CFLRSLLSLSRV*RESRVLHSSFL Trigger: TAAGAATGAGCTGTGGAGGACTCGTGACTCTCTCAACACTCTGCTCAGGGAAAGAAGGCTCCTTAGGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | CAGTGCAGCAGCCACAGGTTGACGTTTAAGAATACCTaGTCCTGTTCTGTCAAACATGGCCATGAGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: QCSSHRLTFKNT*SCSVKHGHEKT Trigger: AGTCTTCTCATGGCCATGTTTGACAGAACAGGATCAGGTATTCTTAAACGTCAACCTGTGGCTGCTGCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | CCTCTTTTCACTGCAGCTCTCCATCTCTTTCCCTGCTaGAAGTGTTTGAGCAGGGATCTTTACTTCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLFTAALHLFPC*KCLSRDLYFSR Trigger: CCTACTGAAGTAAAGATCCCTGCTCAAACACTTTCAGCAGGGAAAGAGATGGAGAGCTGCAGTGAAAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 72 bp | AGCTCACAGATGTCAAAGTCCAGGCACTTTAGACAATaGTATCTCAGTCCTATGATCGGGAAGGTTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSQMSKSRHFRQ*YLSPMIGKVLQ Trigger: CTGCAGAACCTTCCCGATCATAGGACTGAGATACCATTGTCTAAAGTGCCTGGACTTTGACATCTGTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 72 bp | TGGACACATTCCTCCATCACAGTGTGTGACTTCTCGTaGGAATTTTTGTGGAGACCAGATAAGAAACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: WTHSSITVCDFS*EFLWRPDKKHS Trigger: GCTGTGTTTCTTATCTGGTCTCCACAAAAATTCCCACGAGAAGTCACACACTGTGATGGAGGAATGTGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | TCCTCCATCACAGTGTGTGACTTCTCGTGGGAATTTTaGTGGAGACCAGATAAGAAACACAGCTCACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSITVCDFSWEF*WRPDKKHSSQM Trigger: CATCTGTGAGCTGTGTTTCTTATCTGGTCTCCACAAAAATTCCCACGAGAAGTCACACACTGTGATGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 90 bp | CAGTTCTGTTCTTCCTGTAAGGCATATGTGCCTTGCAATTTCTGCTaGTACCTATGTAACTGTTTCCTAAGGAGCCTTCTTTCCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QFCSSCKAYVPCNFC*YLCNCFLRSLLSLS Trigger: GCTCAGGGAAAGAAGGCTCCTTAGGAAACAGTTACATAGGTACAAGCAGAAATTGCAAGGCACATATGCCTTACAGGAAGAACAGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | GCTGTAGCTTGGTCCATAGGTTATCTTGGTTGGTTGTaGGCTCCCGAATCTTTGTTTCAAATCTGCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVAWSIGYLGWL*APESLFQICSS Trigger: AGAACTGCAGATTTGAAACAAAGATTCGGGAGCTCACAACCAACCAAGATAACCTATGGACCAAGCTACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 72 bp | CGTCTCATCTGCTGTAGCTTGGTCCATAGGTTATCTTaGTTGGTTGTGAGCTCCCGAATCTTTGTTTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RLICCSLVHRLS*LVVSSRIFVSN Trigger: ATTTGAAACAAAGATTCGGGAGCTCACAACCAACCAAGATAACCTATGGACCAAGCTACAGCAGATGAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CCA 72 bp | CATCATCTGGTAAAGAATGGAAAATCTTGGATGCTGTaGTTTGAGGAGAAGAAGAAGGATGGAGTGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HHLVKNGKSWML*FEEKKKDGVAA Trigger: TGCAGCCACTCCATCCTTCTTCTTCTCCTCAAACCACAGCATCCAAGATTTTCCATTCTTTACCAGATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 72 bp | TGTTCTTCCTGTAAGGCATATGTGCCTTGCAATTTCTaGTTGTACCTATGTAACTGTTTCCTAAGGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSSCKAYVPCNF*LYLCNCFLRSL Trigger: AAGGCTCCTTAGGAAACAGTTACATAGGTACAAGCAGAAATTGCAAGGCACATATGCCTTACAGGAAGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS GCA 72 bp | CTGCAGTTCTGTTCTTCCTGTAAGGCATATGTGCCTTaGAATTTCTGCTTGTACCTATGTAACTGTTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LQFCSSCKAYVP*NFCLYLCNCFL Trigger: TAGGAAACAGTTACATAGGTACAAGCAGAAATTGCAAGGCACATATGCCTTACAGGAAGAACAGAACTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS CAA 72 bp | TCTTCCTGTAAGGCATATGTGCCTTGCAATTTCTGCTaGTACCTATGTAACTGTTTCCTAAGGAGCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSCKAYVPCNFC*YLCNCFLRSLL Trigger: AAGAAGGCTCCTTAGGAAACAGTTACATAGGTACAAGCAGAAATTGCAAGGCACATATGCCTTACAGGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||
| CDS TCA 72 bp | AGTCCAATTGGCAAAGAGTTTGCACAGATCGTAATTTaGAGGCTGTTCTATAGACAGAATTCTCAACTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SPIGKEFAQIVI*RLFYRQNSQLY Trigger: ATAGAGTTGAGAATTCTGTCTATAGAACAGCCTTCAAATTACGATCTGTGCAAACTCTTTGCCAATTGGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090313.5 |
||