RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYSF (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033788

Ensembl transcript IDs: ENSMUST00000081904.7, ENSMUST00000089595.12, ENSMUST00000113818.8, ENSMUST00000113821.8, ENSMUST00000113823.8, ENSMUST00000153860.4, ENSMUST00000168387.8, ENSMUST00000203695.3, ENSMUST00000203803.3, ENSMUST00000204354.3, ENSMUST00000204591.3, ENSMUST00000204987.3

Found 991 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGAGGAGTGTTGGGTTAGGGGAGAAAGAGAAGATGAAAATAACGTaGTTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCC +
Preference number: 1 (lower is better)
Translates to: QRSVGLGEKEKMKIT*FPRTPWTCARPPGP
Trigger: GGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCTAACCCAACACTCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
3UTR CCA 90 bp GTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTaGGTTAGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAG +
Preference number: 1 (lower is better)
Translates to: VCFILRKPRVYPEEC*VRGEREDENNVIPK
Trigger: CTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCTAACCCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
3UTR TCA 90 bp TGTAGACACATAGCAATATATTTTCTGGTTCTGTCTGCTTTATACTaGGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGTTAGGGGAG +
Preference number: 1 (lower is better)
Translates to: CRHIAIYFLVLSALY*ESQEFIQRSVGLGE
Trigger: CTCCCCTAACCCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACCAGAAAATATATTGCTATGTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113818.8
ENSMUST00000113821.8
3UTR-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGCCAGGAGGCAGCCTaGACCCCCTTCTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVGQEAA*TPFSRA
Trigger: TGCTCTGGAGAAGGGGGTGCAGGCTGCCTCCTGGCC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
3UTR-3UTR GCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGCCAGGAGGCAGCCTaGACCCCCTTCTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLGQEAA*TPFSRA
Trigger: TGCTCTGGAGAAGGGGGTGCAGGCTGCCTCCTGGCC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
3UTR-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGGCCAGGAGGCAGCCTaGACCCCCTTCTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAGQEAA*TPFSRA
Trigger: TGCTCTGGAGAAGGGGGTGCAGGCTGCCTCCTGGCC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
3UTR-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGCCAGGAGGCAGCCTaGACCCCCTTCTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPGQEAA*TPFSRA
Trigger: TGCTCTGGAGAAGGGGGTGCAGGCTGCCTCCTGGCC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGCTGCCCCGGGTCAGTaGGAACCAGGCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGAAPGQ*EPGQAG
Trigger: CCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATCCGGCAGGCTGTTCTaGGGCTCCTCGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEASGRLF*GSSARA
Trigger: TGCCCTGGCCGAGGAGCCCCAGAACAGCCTGCCGGA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGCTGCCCCGGGTCAGTaGGAACCAGGCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVAAPGQ*EPGQAG
Trigger: CCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCTTCCCACAGTTCCTaGCGCAGTAGCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEASHSS*RSSWGP
Trigger: GGGGCCCCAGCTACTGCGGCAGGAACTGTGGGAAGC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGCTGTACTGGGTGGTaGAGGCCAAGGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGCTGW*RPRAGR
Trigger: CCTGCCTGCCCTTGGCCTCCACCACCCAGTACAGCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCACCGCCCGGCTGTACTaGGTGGTGGAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGTARLY*VVEAKG
Trigger: GCCCTTGGCCTCCACCACCCAGTACAGCCGGGCGGT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCCTGCCGCAGTAGCTaGGGCCCCGCCGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSCRSS*GPAGRR
Trigger: TCTTCTCCCGGCGGGGCCCCAGCTACTGCGGCAGGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGCTGCCCCGGGTCAGTaGGAACCAGGCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLAAPGQ*EPGQAG
Trigger: CCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCTGCCCCGGGTCAGTaGGAACCAGGCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASAAPGQ*EPGQAG
Trigger: CCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTTCACCCCAGGCAGCTaGCGCCCCTCTATCACCTGG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEFTPGS*RPSITW
Trigger: CCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCTCGCCCTCGGCCTCTaGCTGCCTGTGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGLALGL*LPVPLQ
Trigger: CTGAAGAGGCACAGGCAGGCAGAGGCCGAGGGCGAG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCACCGCCCGGCTGTACTaGGTGGTGGAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSTARLY*VVEAKG
Trigger: GCCCTTGGCCTCCACCACCCAGTACAGCCGGGCGGT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTCCTGCCGCAGTAGCTaGGGCCCCGCCGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVSCRSS*GPAGRR
Trigger: TCTTCTCCCGGCGGGGCCCCAGCTACTGCGGCAGGA...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCCTGCCGCAGTAGCTaGGGCCCCGCCGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSCRSS*GPAGRR
Trigger: TCTTCTCCCGGCGGGGCCCCAGCTACTGCGGCAGGA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTCGGGGGCATGGGGATaGCTGGATCTTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQESGAWG*LDLLGG
Trigger: CCCTCCCAGAAGATCCAGCCATCCCCATGCCCCCGA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGACACAGTAGGTCTGTaGGAGCCCACAGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEDTVGL*EPTASP
Trigger: GGGGCTCGCTGTGGGCTCCCACAGACCTACTGTGTC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCCACAGTGTCATTGTaGGTGAGGCGGTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEATVSL*VRRSQS
Trigger: GGACTGGGACCGCCTCACTCACAATGACACTGTGGC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGATCTGGGAAGCCCGTaGACTCTCGGGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEDLGSP*TLGDCH
Trigger: ATGGCAGTCCCCGAGAGTTCACGGGCTTCCCAGATC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGATCTGGGAAGCCCGTaGACTCTCGGGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEADLGSP*TLGDCH
Trigger: ATGGCAGTCCCCGAGAGTTCACGGGCTTCCCAGATC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGCGGTCAGCGACCCTaGGGAGCTGGTTTTGGATCT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGGQRP*GAGFGS
Trigger: AGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCCCTCGGCCTCTGCCTaGCTGTGCCTCTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGPSASA*LCLFSA
Trigger: AGCACTGAAGAGGCACAGGCAGGCAGAGGCCGAGGG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCTCGCCCTCGGCCTCTaGCTGCCTGTGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSLALGL*LPVPLQ
Trigger: CTGAAGAGGCACAGGCAGGCAGAGGCCGAGGGCGAG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCTTGTCATCCACCATaGCGCCCAGGGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSCHPP*RPGPPR
Trigger: TCGAGGGGGCCCTGGGCGGCATGGTGGATGACAAGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGGGCCTTGATCCTGTaGTGCTGGCAGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAGALIL*CWQKRW
Trigger: CCACCTCTTCTGCCAGCAGCACAGGATCAAGGCCCC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCAGGGGCACAGCTCCTaGGGGTGGCGTGTAGGACAC +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVQGHSS*GWRVGH
Trigger: GTGTCCTACACGCCACCCCCAGGAGCTGTGCCCCTG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACCGCCCGGCTGTACTaGGTGGTGGAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTARLY*VVEAKG
Trigger: GCCCTTGGCCTCCACCACCCAGTACAGCCGGGCGGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTCCGGCAGGCTGTTCTaGGGCTCCTCGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAASGRLF*GSSARA
Trigger: TGCCCTGGCCGAGGAGCCCCAGAACAGCCTGCCGGA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTCCGGCAGGCTGTTCTaGGGCTCCTCGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSGRLF*GSSARA
Trigger: TGCCCTGGCCGAGGAGCCCCAGAACAGCCTGCCGGA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTCCTGCCGCAGTAGCTaGGGCCCCGCCGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASSCRSS*GPAGRR
Trigger: TCTTCTCCCGGCGGGGCCCCAGCTACTGCGGCAGGA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGTTCATCCCGACCTTaGCCAGCAGGCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAGSSRP*PAGRSS
Trigger: TGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCTAGCAGAGGTGCGTTaGAGCTGGCAGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGLAEVR*SWQRGW
Trigger: CCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCACACAGGCTGGCTTTaGGGTAGCCTCTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSHTGWL*GSLWPP
Trigger: CGGGGGCCAGAGGCTACCTCAAAGCCAGCCTGTGTG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCACACAGGCTGGCTTTaGGGTAGCCTCTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASHTGWL*GSLWPP
Trigger: CGGGGGCCAGAGGCTACCTCAAAGCCAGCCTGTGTG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACACACAGGCTGGCTTTaGGGTAGCCTCTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGHTGWL*GSLWPP
Trigger: CGGGGGCCAGAGGCTACCTCAAAGCCAGCCTGTGTG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCACACAGGCTGGCTTTaGGGTAGCCTCTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAHTGWL*GSLWPP
Trigger: CGGGGGCCAGAGGCTACCTCAAAGCCAGCCTGTGTG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAAGCTCATCTGTCAACTaGGCCACCAGGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEASSSVN*ATRAST
Trigger: TGTGGACGCCCTGGTGGCTCAGTTGACAGATGAGCT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGTCTGGGGGTATGGTaGTGCTGTACTCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGLGVW*CCTPSL
Trigger: AAGGCTGGGAGTACAGCATCACCATACCCCCAGACC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGTGCTTCCATCTGGCTaGGGTCCCTCCTGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVVLPSG*GPSCAV
Trigger: GACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCAC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCCAGGGCACGGAGATaGAGAAGCCAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASARARR*RSQSSA
Trigger: GGCCGAGGACTGGCTTCTGCATCTCCGTGCCCTGGC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCCAGGGCACGGAGATaGAGAAGCCAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAARARR*RSQSSA
Trigger: GGCCGAGGACTGGCTTCTGCATCTCCGTGCCCTGGC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGCTTCCCACAGTTCCTaGCGCAGTAGCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLASHSS*RSSWGP
Trigger: GGGGCCCCAGCTACTGCGGCAGGAACTGTGGGAAGC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCTTCCCACAGTTCCTaGCGCAGTAGCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAASHSS*RSSWGP
Trigger: GGGGCCCCAGCTACTGCGGCAGGAACTGTGGGAAGC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGCCTCTGCCTGCCTGTaGCTCTTCAGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAASACL*LFSASI
Trigger: GATGGAAGCACTGAAGAGGCACAGGCAGGCAGAGGC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTCGCCCTCGGCCTCTaGCTGCCTGTGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASLALGL*LPVPLQ
Trigger: CTGAAGAGGCACAGGCAGGCAGAGGCCGAGGGCGAG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGAGGGCAAACACAGCTaGAGGTCCCGTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEEGKHS*RSRLLQ
Trigger: CTGGAGAAGACGGGACCTGCAGCTGTGTTTGCCCTC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTCTTGTCATCCACCATaGCGCCCAGGGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVSCHPP*RPGPPR
Trigger: TCGAGGGGGCCCTGGGCGGCATGGTGGATGACAAGA...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAAATCAGGCTGGCAACTaGATCGCTGCGCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEANQAGN*IAAPVL
Trigger: AAGGACCGGCGCAGCGATCCAGTTGCCAGCCTGATT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAAAGGACCTCCTGGAGTaGGATCTTGGCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAKDLLE*DLGFPQ
Trigger: CTGGGGGAAGCCAAGATCCCACTCCAGGAGGTCCTT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCACAGCTCCTGGGGGTaGCGTGTAGGACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVHSSWG*RVGHLQ
Trigger: CTGCAGGTGTCCTACACGCCACCCCCAGGAGCTGTG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCAGGGGCACAGCTCCTaGGGGTGGCGTGTAGGACAC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSQGHSS*GWRVGH
Trigger: GTGTCCTACACGCCACCCCCAGGAGCTGTGCCCCTG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACAGGGGCACAGCTCCTaGGGGTGGCGTGTAGGACAC +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLQGHSS*GWRVGH
Trigger: GTGTCCTACACGCCACCCCCAGGAGCTGTGCCCCTG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCAGGGGCACAGCTCCTaGGGGTGGCGTGTAGGACAC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAQGHSS*GWRVGH
Trigger: GTGTCCTACACGCCACCCCCAGGAGCTGTGCCCCTG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAGGGGCACAGCTCCTaGGGGTGGCGTGTAGGACAC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASQGHSS*GWRVGH
Trigger: GTGTCCTACACGCCACCCCCAGGAGCTGTGCCCCTG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGGCTGTACTGGGTGGTaGAGGCCAAGGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSGCTGW*RPRAGR
Trigger: CCTGCCTGCCCTTGGCCTCCACCACCCAGTACAGCC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGCTGTACTGGGTGGTaGAGGCCAAGGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEGCTGW*RPRAGR
Trigger: CCTGCCTGCCCTTGGCCTCCACCACCCAGTACAGCC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATTCAGTGCTTCCATCTaGCTGAGGTCCCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAFSASI*LRSLLR
Trigger: GCGCAGGAGGGACCTCAGCCAGATGGAAGCACTGAA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCACTCCACCACGAGGCTaGGGGAAGAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGTPPRG*GKRCWP
Trigger: TGGCCAGCATCTCTTCCCCCAGCCTCGTGGTGGAGT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCACACTGACCCACAACTaGCCGGCGGCCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSTLTHN*PAAKLA
Trigger: CGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGGCATGGGGATGGCTaGATCTTCTGGGAGGGGATA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAGHGDG*IFWEGI
Trigger: TATCCCCTCCCAGAAGATCCAGCCATCCCCATGCCC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTCGGGGGCATGGGGATaGCTGGATCTTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVSGAWG*LDLLGG
Trigger: CCCTCCCAGAAGATCCAGCCATCCCCATGCCCCCGA...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCACTGGGCCCAGGTGTaGGTTTGGGAGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSHWAQV*VWESAS
Trigger: GCTGGCAGACTCCCAAACCCACACCTGGGCCCAGTG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTTCACCCCAGGCAGCTaGCGCCCCTCTATCACCTGG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEFTPGS*RPSITW
Trigger: CCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTTCACCCCAGGCAGCTaGCGCCCCTCTATCACCTGG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSFTPGS*RPSITW
Trigger: CCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATGTCCTAAGGGAGCGTaGGTCCACCACCGTGATGAA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEACPKGA*VHHRDE
Trigger: TTCATCACGGTGGTGGACTCACGCTCCCTTAGGACA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGCCACAGTGTCATTGTaGGTGAGGCGGTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVATVSL*VRRSQS
Trigger: GGACTGGGACCGCCTCACTCACAATGACACTGTGGC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAGCTCATCTGTCAACTaGGCCACCAGGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSSSVN*ATRAST
Trigger: TGTGGACGCCCTGGTGGCTCAGTTGACAGATGAGCT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAGCCGGAGCAGGTACTaGTCAAGGTGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSRSRY*SRWVAE
Trigger: TTCTGCCACCCACCTTGATCAGTACCTGCTCCGGCT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCTTCCATCTGGCTaGGGTCCCTCCTGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLVLPSG*GPSCAV
Trigger: GACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCAC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGTGCTTCCATCTGGCTaGGGTCCCTCCTGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASVLPSG*GPSCAV
Trigger: GACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCAC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACCTCCTGGACAGGAATaGGAGGCTCCTTGTCATCGA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAPPGQE*EAPCHR
Trigger: TCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATGCTCCACCAGTCAATaGACTCCTCCTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEACSTSQ*TPPPGQ
Trigger: CTGTCCAGGAGGAGGAGTTCATTGACTGGTGGAGCA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTGCTCCACCAGTCAATaGACTCCTCCTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQECSTSQ*TPPPGQ
Trigger: CTGTCCAGGAGGAGGAGTTCATTGACTGGTGGAGCA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGACACGAACCTCCAGTTaGAATTGCCCTCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQETRTSS*NCPPHP
Trigger: TGGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCACATTGGGGAGGTTaGTGGCCCTTGCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSHWGG*WPLPAS
Trigger: GCTTGCTGGCAAGGGCCAGCAACCTCCCCAATGTGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACTCGGAGGAACACTGTaGCTTCAGAGCCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEALGGTL*LQSQVD
Trigger: GTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGCCAGGGCACGGAGATaGAGAAGCCAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWARARR*RSQSSA
Trigger: GGCCGAGGACTGGCTTCTGCATCTCCGTGCCCTGGC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCCAGTTCCCGACCAGTaGCAGCTTTGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEPVPDQ*QLCLVL
Trigger: GAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCCTCGGCCTCTGCCTaGCTGTGCCTCTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPPSASA*LCLFSA
Trigger: AGCACTGAAGAGGCACAGGCAGGCAGAGGCCGAGGG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACCCTCGGCCTCTGCCTaGCTGTGCCTCTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLPSASA*LCLFSA
Trigger: AGCACTGAAGAGGCACAGGCAGGCAGAGGCCGAGGG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCCTCGGCCTCTGCCTaGCTGTGCCTCTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASPSASA*LCLFSA
Trigger: AGCACTGAAGAGGCACAGGCAGGCAGAGGCCGAGGG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCTCGCCCTCGGCCTCTaGCTGCCTGTGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWLALGL*LPVPLQ
Trigger: CTGAAGAGGCACAGGCAGGCAGAGGCCGAGGGCGAG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGAGGGCAAACACAGCTaGAGGTCCCGTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGEGKHS*RSRLLQ
Trigger: CTGGAGAAGACGGGACCTGCAGCTGTGTTTGCCCTC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCTTGTCATCCACCATaGCGCCCAGGGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSCHPP*RPGPPR
Trigger: TCGAGGGGGCCCTGGGCGGCATGGTGGATGACAAGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACTGATGACACAGGACTaGACTGTCTGCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEALMTQD*TVCPPH
Trigger: GTGTGGTGGGCAGACAGTGCAGTCCTGTGTCATCAG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGTCCTTCTTCACATTaGGGAGGTTGCTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAGPSSH*GGCWPL
Trigger: CAAGGGCCAGCAACCTCCCCAATGTGAAGAAGGACC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCTCGAAAAATCAGGCTaGCAACTGGATCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQELEKSG*QLDRCA
Trigger: GGCGCAGCGATCCAGTTGCCAGCCTGATTTTTCGAG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCAGAGAGGCTGGGGGTaGCAAGGACCTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPQRGWG*QGPPGV
Trigger: CACTCCAGGAGGTCCTTGCCACCCCCAGCCTCTCTG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAGAGAGGCTGGGGGTaGCAAGGACCTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASQRGWG*QGPPGV
Trigger: CACTCCAGGAGGTCCTTGCCACCCCCAGCCTCTCTG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCACAGCTCCTGGGGGTaGCGTGTAGGACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAHSSWG*RVGHLQ
Trigger: CTGCAGGTGTCCTACACGCCACCCCCAGGAGCTGTG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCACAGCTCCTGGGGGTaGCGTGTAGGACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASHSSWG*RVGHLQ
Trigger: CTGCAGGTGTCCTACACGCCACCCCCAGGAGCTGTG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACACAGCTCCTGGGGGTaGCGTGTAGGACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGHSSWG*RVGHLQ
Trigger: CTGCAGGTGTCCTACACGCCACCCCCAGGAGCTGTG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAGCTTCAGGCAGAAGTaGGCTCCTCGAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSFRQK*APRRAT
Trigger: TGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCCAAGGGCAGGCAGGTaGTGTCGAACTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGPRAGR*CRTCSR
Trigger: ACGGGAACAAGTTCGACACCACCTGCCTGCCCTTGG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGCCTTCAGAGCCAAGTaGACCTGCTCCAGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAAFRAK*TCSRLA
Trigger: AGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGAAGGTATCTCGTaGATGTCACACAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEAEGIS*MSHRGW
Trigger: CCAGCCCCTGTGTGACATCCACGAGATACCTTCTGC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGTCCTTGTCCATGGCTaGCAGGTCTCGGGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSVLVHG*QVSGLV
Trigger: TACCAGGCCCGAGACCTGCCAGCCATGGACAAGGAC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGTCCTTGTCCATGGCTaGCAGGTCTCGGGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVVLVHG*QVSGLV
Trigger: TACCAGGCCCGAGACCTGCCAGCCATGGACAAGGAC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGAAGGAGACGATaGCGTAGGGATCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEAGRRR*RRDQRR
Trigger: CCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGCAGGAAGGAGACGATaGCGTAGGGATCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAAGRRR*RRDQRR
Trigger: CCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGCCGGCGGCCAAACTaGCGATTATCAATGACCTTG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGRRPN*RLSMTL
Trigger: CAAGGTCATTGATAATCGCCAGTTTGGCCGCCGGCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGCCGGCGGCCAAACTaGCGATTATCAATGACCTTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAGRRPN*RLSMTL
Trigger: CAAGGTCATTGATAATCGCCAGTTTGGCCGCCGGCC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCACACTGACCCACAACTaGCCGGCGGCCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSTLTHN*PAAKLA
Trigger: CGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTACACTGACCCACAACTaGCCGGCGGCCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASTLTHN*PAAKLA
Trigger: CGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGT...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCGGGGGCATGGGGATaGCTGGATCTTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSGAWG*LDLLGG
Trigger: CCCTCCCAGAAGATCCAGCCATCCCCATGCCCCCGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAATTGTCTCGGGGGCATaGGGATGGCTGGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAIVSGA*GWLDLL
Trigger: CAGAAGATCCAGCCATCCCCATGCCCCCGAGACAAT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGATTGTCTCGGGGGCATaGGGATGGCTGGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEIVSGA*GWLDLL
Trigger: CAGAAGATCCAGCCATCCCCATGCCCCCGAGACAAT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGACACAGTAGGTCTGTaGGAGCCCACAGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASDTVGL*EPTASP
Trigger: GGGGCTCGCTGTGGGCTCCCACAGACCTACTGTGTC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGACACAGTAGGTCTGTaGGAGCCCACAGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGDTVGL*EPTASP
Trigger: GGGGCTCGCTGTGGGCTCCCACAGACCTACTGTGTC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCACTGGGCCCAGGTGTaGGTTTGGGAGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAHWAQV*VWESAS
Trigger: GCTGGCAGACTCCCAAACCCACACCTGGGCCCAGTG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCACTGGGCCCAGGTGTaGGTTTGGGAGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSHWAQV*VWESAS
Trigger: GCTGGCAGACTCCCAAACCCACACCTGGGCCCAGTG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACACTGGGCCCAGGTGTaGGTTTGGGAGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGHWAQV*VWESAS
Trigger: GCTGGCAGACTCCCAAACCCACACCTGGGCCCAGTG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCTTCACCAGCTTCATaGCAGCGTAGTTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEASPAS*QRSSGR
Trigger: CCTTCCCGAACTACGCTGCCATGAAGCTGGTGAAGC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCTAGCAGAGGTGCGTTaGAGCTGGCAGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPLAEVR*SWQRGW
Trigger: CCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCTAGCAGAGGTGCGTTaGAGCTGGCAGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAALAEVR*SWQRGW
Trigger: CCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCCACAGTGTCATTGTaGGTGAGGCGGTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASATVSL*VRRSQS
Trigger: GGACTGGGACCGCCTCACTCACAATGACACTGTGGC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCCACAGTGTCATTGTaGGTGAGGCGGTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAATVSL*VRRSQS
Trigger: GGACTGGGACCGCCTCACTCACAATGACACTGTGGC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGATCTGGGAAGCCCGTaGACTCTCGGGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPDLGSP*TLGDCH
Trigger: ATGGCAGTCCCCGAGAGTTCACGGGCTTCCCAGATC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGATCTGGGAAGCCCGTaGACTCTCGGGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAADLGSP*TLGDCH
Trigger: ATGGCAGTCCCCGAGAGTTCACGGGCTTCCCAGATC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGATCTGGGAAGCCCGTaGACTCTCGGGGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGDLGSP*TLGDCH
Trigger: ATGGCAGTCCCCGAGAGTTCACGGGCTTCCCAGATC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCTGCAGCATTGTGGCTaGGTAGAAGGCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQELQHCG*VEGSKE
Trigger: CTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGCGGTCAGCGACCCTaGGGAGCTGGTTTTGGATCT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGGGQRP*GAGFGS
Trigger: AGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGCGGTCAGCGACCCTaGGGAGCTGGTTTTGGATCT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPGGQRP*GAGFGS
Trigger: AGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCAGCTCATCTGTCAACTaGGCCACCAGGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSSSVN*ATRAST
Trigger: TGTGGACGCCCTGGTGGCTCAGTTGACAGATGAGCT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAGCCGGAGCAGGTACTaGTCAAGGTGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVSRSRY*SRWVAE
Trigger: TTCTGCCACCCACCTTGATCAGTACCTGCTCCGGCT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGTGCTTCCATCTGGCTaGGGTCCCTCCTGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWVLPSG*GPSCAV
Trigger: GACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCAC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCACACGAACCTCCAGTTaGAATTGCCCTCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGTRTSS*NCPPHP
Trigger: TGGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTAGCAGTAGGCATCGCTaGTGTCGGAGTCCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSSRHR*CRSPGC
Trigger: ACACCCCGGACTCCGACATCAGCGATGCCTACTGCT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCGAGTTCGCTTGGTCTaGCCAGCAGCTGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVRVRLV*PAAVTL
Trigger: CAAGGTCACAGCTGCTGGGCAGACCAAGCGAACTCG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCCAGTTCCCGACCAGTaGCAGCTTTGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGPVPDQ*QLCLVL
Trigger: GAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGCCTCTGCCTGCCTGTaGCTCTTCAGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVASACL*LFSASI
Trigger: GATGGAAGCACTGAAGAGGCACAGGCAGGCAGAGGC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGAAGGCATCTGTCTTaGGGTACTCCAGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGRHLS*GTPGGT
Trigger: AGTTCCACCTGGAGTACCGCAAGACAGATGCCTTCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACAGGACTGCACTGTCTaGCCACCACACTCCACCACG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLQDCTV*PPHSTT
Trigger: CGTGGTGGAGTGTGGTGGGCAGACAGTGCAGTCCTG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCAGGACTGCACTGTCTaGCCACCACACTCCACCACG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPQDCTV*PPHSTT
Trigger: CGTGGTGGAGTGTGGTGGGCAGACAGTGCAGTCCTG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCTGATGACACAGGACTaGACTGTCTGCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGLMTQD*TVCPPH
Trigger: GTGTGGTGGGCAGACAGTGCAGTCCTGTGTCATCAG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGGGGCCTTGATCCTGTaGTGCTGGCAGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAGALIL*CWQKRW
Trigger: CCACCTCTTCTGCCAGCAGCACAGGATCAAGGCCCC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGGCCTTGATCCTGTaGTGCTGGCAGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGGALIL*CWQKRW
Trigger: CCACCTCTTCTGCCAGCAGCACAGGATCAAGGCCCC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGGCCGTGACTCCACATaGTCAGGAACCAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGGRDST*SGTKPC
Trigger: ACAAGGCTTGGTTCCTGAGCATGTGGAGTCACGGCC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGGTCCTTCTTCACATTaGGGAGGTTGCTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGGPSSH*GGCWPL
Trigger: CAAGGGCCAGCAACCTCCCCAATGTGAAGAAGGACC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCCTGGAGTGGGATCTTaGCTTCCCCCAGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSPGVGS*LPPGTC
Trigger: ACAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAAGGACCTCCTGGAGTaGGATCTTGGCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVKDLLE*DLGFPQ
Trigger: CTGGGGGAAGCCAAGATCCCACTCCAGGAGGTCCTT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCAGAGAGGCTGGGGGTaGCAAGGACCTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWQRGWG*QGPPGV
Trigger: CACTCCAGGAGGTCCTTGCCACCCCCAGCCTCTCTG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACCCACAGCAGCACTCTaGTCCAGGAACGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGPTAAL*SRNGSA
Trigger: AGCTGAGCCGTTCCTGGACCAGAGTGCTGCTGTGGG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCCACAGCAGCACTCTaGTCCAGGAACGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPPTAAL*SRNGSA
Trigger: AGCTGAGCCGTTCCTGGACCAGAGTGCTGCTGTGGG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCCCACAGCAGCACTCTaGTCCAGGAACGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSPTAAL*SRNGSA
Trigger: AGCTGAGCCGTTCCTGGACCAGAGTGCTGCTGTGGG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCCAAGGGCAGGCAGGTaGTGTCGAACTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVPRAGR*CRTCSR
Trigger: ACGGGAACAAGTTCGACACCACCTGCCTGCCCTTGG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCCAAGGGCAGGCAGGTaGTGTCGAACTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSPRAGR*CRTCSR
Trigger: ACGGGAACAAGTTCGACACCACCTGCCTGCCCTTGG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCATGTCACACAGGGGCTaGCTGCAGTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSMSHRG*LQSARS
Trigger: GCTCCTTGCAGACTGCAGCCAGCCCCTGTGTGACAT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGCAGAAGGTATCTCGTaGATGTCACACAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGAEGIS*MSHRGW
Trigger: CCAGCCCCTGTGTGACATCCACGAGATACCTTCTGC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGTCCTTGTCCATGGCTaGCAGGTCTCGGGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASVLVHG*QVSGLV
Trigger: TACCAGGCCCGAGACCTGCCAGCCATGGACAAGGAC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTGTCCATGGCTaGCAGGTCTCGGGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLVLVHG*QVSGLV
Trigger: TACCAGGCCCGAGACCTGCCAGCCATGGACAAGGAC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGCCTCCCTTTGAGGTaGTGGGTAAGGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGLPLR*WVRQIC
Trigger: ACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACTCCACCACGAGGCTaGGGGAAGAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTPPRG*GKRCWP
Trigger: TGGCCAGCATCTCTTCCCCCAGCCTCGTGGTGGAGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTACTCCACCACGAGGCTaGGGGAAGAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPTPPRG*GKRCWP
Trigger: TGGCCAGCATCTCTTCCCCCAGCCTCGTGGTGGAGT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCACTCCACCACGAGGCTaGGGGAAGAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSTPPRG*GKRCWP
Trigger: TGGCCAGCATCTCTTCCCCCAGCCTCGTGGTGGAGT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGGCCGGCGGCCAAACTaGCGATTATCAATGACCTTG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGGRRPN*RLSMTL
Trigger: CAAGGTCATTGATAATCGCCAGTTTGGCCGCCGGCC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGACACAGTAGGTCTGTaGGAGCCCACAGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWDTVGL*EPTASP
Trigger: GGGGCTCGCTGTGGGCTCCCACAGACCTACTGTGTC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCACTTCTCAGCCGTCTTaGCTGGCTTGGGCATTCGGT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGTSQPS*LAWAFG
Trigger: ACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGGTTCATCCCGACCTTaGCCAGCAGGCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSGSSRP*PAGRSS
Trigger: TGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGGTTCATCCCGACCTTaGCCAGCAGGCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAGSSRP*PAGRSS
Trigger: TGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCATGGTGCTGTCACTaGGCAGGGACCAAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPPWCCH*AGTKSQ
Trigger: CTGAGACTTGGTCCCTGCTCAGTGACAGCACCATGG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081904.7
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCTATCACCTGGACTCTaGTCTGGAAGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGLSPGL*SGSPVA
Trigger: AGCCACAGGACTTCCAGATCAGAGTCCAGGTGATAG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGATGTTCTGGTTCCACTaGGGGTTAGCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEMFWFH*GLAVFS
Trigger: GGAGAAGACAGCTAACCCTCAGTGGAACCAGAACAT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACTCCCTTTCCTGTGTTaGGCTCTGCATAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEALPFLC*ALHKDL
Trigger: CAGATCCTTATGCAGAGCTCAACACAGGAAAGGGAG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGGCGGTCAGCGACCCTaGGGAGCTGGTTTTGGATCT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWGGQRP*GAGFGS
Trigger: AGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGAGCTCATCTGTCAACTaGGCCACCAGGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEESSSVN*ATRAST
Trigger: TGTGGACGCCCTGGTGGCTCAGTTGACAGATGAGCT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTAGCCGGAGCAGGTACTaGTCAAGGTGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSRSRY*SRWVAE
Trigger: TTCTGCCACCCACCTTGATCAGTACCTGCTCCGGCT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCGGAGCAGGTACTaGTCAAGGTGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSSRSRY*SRWVAE
Trigger: TTCTGCCACCCACCTTGATCAGTACCTGCTCCGGCT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGGTCTGGGGGTATGGTaGTGCTGTACTCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAGLGVW*CCTPSL
Trigger: AAGGCTGGGAGTACAGCATCACCATACCCCCAGACC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCCTCCTGGACAGGAATaGGAGGCTCCTTGTCATCGA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSPPGQE*EAPCHR
Trigger: TCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGAGGTTGCTGGCCCTTaGCAGCAAGCAACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSEVAGP*QQATEH
Trigger: ATGCTCTGTTGCTTGCTGGCAAGGGCCAGCAACCTC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTCACATTGGGGAGGTTaGTGGCCCTTGCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSHWGG*WPLPAS
Trigger: GCTTGCTGGCAAGGGCCAGCAACCTCCCCAATGTGA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCGAGTTCGCTTGGTCTaGCCAGCAGCTGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSRVRLV*PAAVTL
Trigger: CAAGGTCACAGCTGCTGGGCAGACCAAGCGAACTCG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCGAGTTCGCTTGGTCTaGCCAGCAGCTGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAARVRLV*PAAVTL
Trigger: CAAGGTCACAGCTGCTGGGCAGACCAAGCGAACTCG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGAGGTCTTCCACCTTCTaGTCACTGTGTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQERSSTF*SLCSTS
Trigger: ACTGGTGGAACACAGTGAGCAGAAGGTGGAAGACCT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGACACGCTTGTCACCCTaGAGCATCCAGATGATGATG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQETRLSP*SIQMMM
Trigger: CATCATCATCTGGATGCTGCAGGGTGACAAGCGTGT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGCCTCTGCCTGCCTGTaGCTCTTCAGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSASACL*LFSASI
Trigger: GATGGAAGCACTGAAGAGGCACAGGCAGGCAGAGGC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGGAAGGCATCTGTCTTaGGGTACTCCAGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGGRHLS*GTPGGT
Trigger: AGTTCCACCTGGAGTACCGCAAGACAGATGCCTTCC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGAGGGCAAACACAGCTaGAGGTCCCGTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGEGKHS*RSRLLQ
Trigger: CTGGAGAAGACGGGACCTGCAGCTGTGTTTGCCCTC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCAGGACTGCACTGTCTaGCCACCACACTCCACCACG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWQDCTV*PPHSTT
Trigger: CGTGGTGGAGTGTGGTGGGCAGACAGTGCAGTCCTG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGCCTTGATCCTGTGCTaGTGGCAGAAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPALILC*WQKRWR
Trigger: CCTCCACCTCTTCTGCCAGCAGCACAGGATCAAGGC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGCCTTGATCCTGTGCTaGTGGCAGAAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSALILC*WQKRWR
Trigger: CCTCCACCTCTTCTGCCAGCAGCACAGGATCAAGGC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCCTTGATCCTGTGCTaGTGGCAGAAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAALILC*WQKRWR
Trigger: CCTCCACCTCTTCTGCCAGCAGCACAGGATCAAGGC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCACGTGCTGGGATCTTaGTCTCTGTCTTGTCGAGTC +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGHVLGS*SLSCRV
Trigger: GACTCGACAAGACAGAGAGCAAGATCCCAGCACGTG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACATTGGGGAGGTTGCTaGCCCTTGCCAGCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGHWGGC*PLPASN
Trigger: GTTGCTTGCTGGCAAGGGCCAGCAACCTCCCCAATG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCATTGGGGAGGTTGCTaGCCCTTGCCAGCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASHWGGC*PLPASN
Trigger: GTTGCTTGCTGGCAAGGGCCAGCAACCTCCCCAATG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCATTGGGGAGGTTGCTaGCCCTTGCCAGCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSHWGGC*PLPASN
Trigger: GTTGCTTGCTGGCAAGGGCCAGCAACCTCCCCAATG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAATCAGGCTGGCAACTaGATCGCTGCGCCGGTCCTT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAANQAGN*IAAPVL
Trigger: AAGGACCGGCGCAGCGATCCAGTTGCCAGCCTGATT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACCTGGAGTGGGATCTTaGCTTCCCCCAGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLPGVGS*LPPGTC
Trigger: ACAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTGGAGTGGGATCTTaGCTTCCCCCAGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEPGVGS*LPPGTC
Trigger: ACAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTAAGGACCTCCTGGAGTaGGATCTTGGCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASKDLLE*DLGFPQ
Trigger: CTGGGGGAAGCCAAGATCCCACTCCAGGAGGTCCTT...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAAGGACCTCCTGGAGTaGGATCTTGGCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSKDLLE*DLGFPQ
Trigger: CTGGGGGAAGCCAAGATCCCACTCCAGGAGGTCCTT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGTGGCAAGGACCTCCTaGAGTGGGATCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSVARTS*SGILAS
Trigger: GGAAGCCAAGATCCCACTCCAGGAGGTCCTTGCCAC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGTGGCAAGGACCTCCTaGAGTGGGATCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPVARTS*SGILAS
Trigger: GGAAGCCAAGATCCCACTCCAGGAGGTCCTTGCCAC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTGGCAAGGACCTCCTaGAGTGGGATCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGVARTS*SGILAS
Trigger: GGAAGCCAAGATCCCACTCCAGGAGGTCCTTGCCAC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGTGGCAAGGACCTCCTaGAGTGGGATCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASVARTS*SGILAS
Trigger: GGAAGCCAAGATCCCACTCCAGGAGGTCCTTGCCAC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGAGCTTCAGGCAGAAGTaGGCTCCTCGAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEESFRQK*APRRAT
Trigger: TGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGCTTCAGGCAGAAGTaGGCTCCTCGAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAASFRQK*APRRAT
Trigger: TGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACATCCTGCAGCATTGTaGCTGAGTAGAAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAHPAAL*LSRRQQ
Trigger: TTGCTGCCTTCTACTCAGCCACAATGCTGCAGGATG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCCAAGGGCAGGCAGGTaGTGTCGAACTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAPRAGR*CRTCSR
Trigger: ACGGGAACAAGTTCGACACCACCTGCCTGCCCTTGG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCATGTCACACAGGGGCTaGCTGCAGTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSMSHRG*LQSARS
Trigger: GCTCCTTGCAGACTGCAGCCAGCCCCTGTGTGACAT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATGTCACACAGGGGCTaGCTGCAGTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAMSHRG*LQSARS
Trigger: GCTCCTTGCAGACTGCAGCCAGCCCCTGTGTGACAT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGATGTCACACAGGGGCTaGCTGCAGTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEMSHRG*LQSARS
Trigger: GCTCCTTGCAGACTGCAGCCAGCCCCTGTGTGACAT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTGCTCCAGGGCAGTaGAGAGCTCACTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEPAPGQ*RAHYGQ
Trigger: TTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCTGCTCCAGGGCAGTaGAGAGCTCACTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPPAPGQ*RAHYGQ
Trigger: TTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACCTGCTCCAGGGCAGTaGAGAGCTCACTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGPAPGQ*RAHYGQ
Trigger: TTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATTCAGTGCTTCCATCTaGCTGAGGTCCCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLFSASI*LRSLLR
Trigger: GCGCAGGAGGGACCTCAGCCAGATGGAAGCACTGAA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGCAGGAAGGAGACGATaGCGTAGGGATCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSAGRRR*RRDQRR
Trigger: CCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGAACCATGTAGATGTTaGCCTCCCTTTGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEEPCRC*PPFEVV
Trigger: CACCACCTCAAAGGGAGGCCAACATCTACATGGTTC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGAACCATGTAGATGTTaGCCTCCCTTTGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAEPCRC*PPFEVV
Trigger: CACCACCTCAAAGGGAGGCCAACATCTACATGGTTC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAGGCCAGGATCTCAATaGCAGTACGTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGRPGSQ*QYVGEL
Trigger: CAGCTCTCCAACGTACTGCCATTGAGATCCTGGCCT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTGGGGGAAGAGATGCTaGCCATCTGATAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEWGKRC*PSDSSS
Trigger: TGAAGAGCTATCAGATGGCCAGCATCTCTTCCCCCA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGGCATGGGGATGGCTaGATCTTCTGGGAGGGGATA +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEGHGDG*IFWEGI
Trigger: TATCCCCTCCCAGAAGATCCAGCCATCCCCATGCCC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACCCCTGCTCGATATCTaGCTGCAGAGGACTATAAAG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAPLLDI*LQRTIK
Trigger: CTTTATAGTCCTCTGCAGCCAGATATCGAGCAGGGG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGAAGACCACACGTGCTaGGATCTTGCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEEDHTC*DLALCL
Trigger: AAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGGTTCATCCCGACCTTaGCCAGCAGGCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWGSSRP*PAGRSS
Trigger: TGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGCTTCACCAGCTTCATaGCAGCGTAGTTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVASPAS*QRSSGR
Trigger: CCTTCCCGAACTACGCTGCCATGAAGCTGGTGAAGC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTCGTCTCATGGTCCTTaGCCACCACGAGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVSSHGP*PPREVL
Trigger: CAGAACTTCTCGTGGTGGTCAAGGACCATGAGACGA...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTATCACCTGGACTCTaGTCTGGAAGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVLSPGL*SGSPVA
Trigger: AGCCACAGGACTTCCAGATCAGAGTCCAGGTGATAG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATGTCCTAAGGGAGCGTaGGTCCACCACCGTGATGAA +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGCPKGA*VHHRDE
Trigger: TTCATCACGGTGGTGGACTCACGCTCCCTTAGGACA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTGTCCTAAGGGAGCGTaGGTCCACCACCGTGATGAA +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPCPKGA*VHHRDE
Trigger: TTCATCACGGTGGTGGACTCACGCTCCCTTAGGACA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTGTCCTAAGGGAGCGTaGGTCCACCACCGTGATGAA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAACPKGA*VHHRDE
Trigger: TTCATCACGGTGGTGGACTCACGCTCCCTTAGGACA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCTCCCTTTCCTGTGTTaGGCTCTGCATAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGLPFLC*ALHKDL
Trigger: CAGATCCTTATGCAGAGCTCAACACAGGAAAGGGAG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCACTGTCTTCTGGCTTTaGTGCAGGAAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGTVFWL*CRKETM
Trigger: CATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCAAAGCCAGGGATGTaGTGGATGGCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSKPGM*WMAGFS
Trigger: AGAGAAGCCAGCCATCCATCACATCCCTGGCTTTGA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGGATGGACTCTCTGCTaGGTATGGGTCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSGWTLC*VWVAQE
Trigger: TTCCTGTGCGACCCATACTCAGCAGAGAGTCCATCC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGGATGGACTCTCTGCTaGGTATGGGTCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAGWTLC*VWVAQE
Trigger: TTCCTGTGCGACCCATACTCAGCAGAGAGTCCATCC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCCTCCTGGACAGGAATaGGAGGCTCCTTGTCATCGA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSPPGQE*EAPCHR
Trigger: TCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTGCTCCACCAGTCAATaGACTCCTCCTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSCSTSQ*TPPPGQ
Trigger: CTGTCCAGGAGGAGGAGTTCATTGACTGGTGGAGCA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCCCCGGTAGAGCTTaGAGGTGTTACAAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSCPGRA*RCYKSR
Trigger: CCGACTTTTGTAACACCTTCAAGCTCTACCGGGGCA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTACACGAACCTCCAGTTaGAATTGCCCTCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPTRTSS*NCPPHP
Trigger: TGGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATCTTGTACGGGGAGGTaGACCACAGGAAAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEASCTGR*TTGKKY
Trigger: ATACTTCTTTCCTGTGGTTCACCTCCCCGTACAAGA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGAGGTTGCTGGCCCTTaGCAGCAAGCAACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSEVAGP*QQATEH
Trigger: ATGCTCTGTTGCTTGCTGGCAAGGGCCAGCAACCTC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGAGGTTGCTGGCCCTTaGCAGCAAGCAACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPEVAGP*QQATEH
Trigger: ATGCTCTGTTGCTTGCTGGCAAGGGCCAGCAACCTC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTCTTCTCCAGGATCTTaGTGCAGAGCATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQESSPGS*CRAFSQ
Trigger: CTGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTCGGAGGAACACTGTaGCTTCAGAGCCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEELGGTL*LQSQVD
Trigger: GTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTCGGAGGAACACTGTaGCTTCAGAGCCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASLGGTL*LQSQVD
Trigger: GTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGCTGGCTGCAGTCTaGAAGGAGCTCATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGGLAAV*KELICQ
Trigger: TTGACAGATGAGCTCCTTGCAGACTGCAGCCAGCCC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATTCAGAAAGATGGTCTaGAGCTTCCCACAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAFRKMV*SFPQFL
Trigger: CAGGAACTGTGGGAAGCTGCAGACCATCTTTCTGAA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCCAGTTCCCGACCAGTaGCAGCTTTGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAPVPDQ*QLCLVL
Trigger: GAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCAGTTCCCGACCAGTaGCAGCTTTGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASPVPDQ*QLCLVL
Trigger: GAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTGATGACACAGGACTaGACTGTCTGCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSLMTQD*TVCPPH
Trigger: GTGTGGTGGGCAGACAGTGCAGTCCTGTGTCATCAG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGATACAGGCTCCAGGGTaGAAGGGATGTAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEIQAPG*KGCSYP
Trigger: AGGATAACTACATCCCTTGCACCCTGGAGCCTGTAT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGCCGTGACTCCACATaGTCAGGAACCAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPGRDST*SGTKPC
Trigger: ACAAGGCTTGGTTCCTGAGCATGTGGAGTCACGGCC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGGCCGTGACTCCACATaGTCAGGAACCAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAGRDST*SGTKPC
Trigger: ACAAGGCTTGGTTCCTGAGCATGTGGAGTCACGGCC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCTCGAAAAATCAGGCTaGCAACTGGATCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAALEKSG*QLDRCA
Trigger: GGCGCAGCGATCCAGTTGCCAGCCTGATTTTTCGAG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACAGCAGCTTTCTAGGTaGGGCAGAGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAQQLSR*GRASFS
Trigger: AGAAAAAGAAGCTCTGCCCCACCTAGAAAGCTGCTG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGCTTCAGGCAGAAGTaGGCTCCTCGAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWSFRQK*APRRAT
Trigger: TGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTGTGTTCCACCAGTTTaGTCTCCAGGGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQECVPPV*SPGTTE
Trigger: TTCTGTTGTCCCTGGAGACCAAACTGGTGGAACACA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCATGCTGACCTCGAACTaGATGGCGTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVMLTSN*MASSTS
Trigger: GGATGTGGATGACGCCATCCAGTTCGAGGTCAGCAT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCCTTCAGAGCCAAGTaGACCTGCTCCAGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASAFRAK*TCSRLA
Trigger: AGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCAGAAGGTATCTCGTaGATGTCACACAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASAEGIS*MSHRGW
Trigger: CCAGCCCCTGTGTGACATCCACGAGATACCTTCTGC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGCAGAAGGTATCTCGTaGATGTCACACAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSAEGIS*MSHRGW
Trigger: CCAGCCCCTGTGTGACATCCACGAGATACCTTCTGC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCACTGATCAAGGTGGGTaGCAGAAGGTATCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGTDQGG*QKVSRG
Trigger: TCCACGAGATACCTTCTGCCACCCACCTTGATCAGT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTTCAGTGCTTCCATCTaGCTGAGGTCCCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWFSASI*LRSLLR
Trigger: GCGCAGGAGGGACCTCAGCCAGATGGAAGCACTGAA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGCAGGAAGGAGACGATaGCGTAGGGATCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEAGRRR*RRDQRR
Trigger: CCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGGAAGGAGACGATaGCGTAGGGATCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGAGRRR*RRDQRR
Trigger: CCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCATCCGTTCCAGGCTTaGCTGACAAATACAGCGACC +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSHPFQA*LTNTAT
Trigger: GGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGCCTCCCTTTGAGGTaGTGGGTAAGGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVGLPLR*WVRQIC
Trigger: ACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCTTGACCACAATAGGTaGACAGTAGAGGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQELDHNR*TVEVLS
Trigger: AGAGAGGACCTCTACTGTCCACCTATTGTGGTCAAG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGGCCGGCGGCCAAACTaGCGATTATCAATGACCTTG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSGRRPN*RLSMTL
Trigger: CAAGGTCATTGATAATCGCCAGTTTGGCCGCCGGCC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGCCGGCGGCCAAACTaGCGATTATCAATGACCTTG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLGRRPN*RLSMTL
Trigger: CAAGGTCATTGATAATCGCCAGTTTGGCCGCCGGCC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATTCTCCGATGACAGATaGATCATCTGTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAFSDDR*IICLLL
Trigger: CAGGAGGAGACAGATGATCCATCTGTCATCGGAGAA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCATTGTCTCGGGGGCATaGGGATGGCTGGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSIVSGA*GWLDLL
Trigger: CAGAAGATCCAGCCATCCCCATGCCCCCGAGACAAT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATTGTCTCGGGGGCATaGGGATGGCTGGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAIVSGA*GWLDLL
Trigger: CAGAAGATCCAGCCATCCCCATGCCCCCGAGACAAT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAATTGTCTCGGGGGCATaGGGATGGCTGGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLIVSGA*GWLDLL
Trigger: CAGAAGATCCAGCCATCCCCATGCCCCCGAGACAAT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGTCACACTTGCCATTaGGGTCCTTGGGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGGHTCH*GPWAVS
Trigger: GCTTACAGCCCAAGGACCCCAATGGCAAGTGTGACC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGTCACACTTGCCATTaGGGTCCTTGGGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEGHTCH*GPWAVS
Trigger: GCTTACAGCCCAAGGACCCCAATGGCAAGTGTGACC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGGTCACACTTGCCATTaGGGTCCTTGGGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASGHTCH*GPWAVS
Trigger: GCTTACAGCCCAAGGACCCCAATGGCAAGTGTGACC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGAGAAGGCATCCTTCTTaGCAACAGCACAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQERRHPS*QQHRLA
Trigger: AGCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACTTCTCAGCCGTCTTaGCTGGCTTGGGCATTCGGT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTSQPS*LAWAFG
Trigger: ACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGACTTCTCAGCCGTCTTaGCTGGCTTGGGCATTCGGT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEETSQPS*LAWAFG
Trigger: ACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAACTTCTCAGCCGTCTTaGCTGGCTTGGGCATTCGGT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLTSQPS*LAWAFG
Trigger: ACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGCTTCACCAGCTTCATaGCAGCGTAGTTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLASPAS*QRSSGR
Trigger: CCTTCCCGAACTACGCTGCCATGAAGCTGGTGAAGC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCTTCACCAGCTTCATaGCAGCGTAGTTCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASASPAS*QRSSGR
Trigger: CCTTCCCGAACTACGCTGCCATGAAGCTGGTGAAGC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCGTCTCATGGTCCTTaGCCACCACGAGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSSHGP*PPREVL
Trigger: CAGAACTTCTCGTGGTGGTCAAGGACCATGAGACGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTCGTCTCATGGTCCTTaGCCACCACGAGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSSSHGP*PPREVL
Trigger: CAGAACTTCTCGTGGTGGTCAAGGACCATGAGACGA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTCGTCTCATGGTCCTTaGCCACCACGAGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEESSHGP*PPREVL
Trigger: CAGAACTTCTCGTGGTGGTCAAGGACCATGAGACGA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTATCACCTGGACTCTaGTCTGGAAGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEELSPGL*SGSPVA
Trigger: AGCCACAGGACTTCCAGATCAGAGTCCAGGTGATAG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCTATCACCTGGACTCTaGTCTGGAAGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPLSPGL*SGSPVA
Trigger: AGCCACAGGACTTCCAGATCAGAGTCCAGGTGATAG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTATCACCTGGACTCTaGTCTGGAAGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSLSPGL*SGSPVA
Trigger: AGCCACAGGACTTCCAGATCAGAGTCCAGGTGATAG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAGCCAAAGATCTGCTTaGCGTTGTCCATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSQRSA*RCPSQH
Trigger: ATGCTGTGATGGACAACGTCAAGCAGATCTTTGGCT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCATGTTCTGGTTCCACTaGGGGTTAGCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSMFWFH*GLAVFS
Trigger: GGAGAAGACAGCTAACCCTCAGTGGAACCAGAACAT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCCTTTCCTGTGTTaGGCTCTGCATAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVLPFLC*ALHKDL
Trigger: CAGATCCTTATGCAGAGCTCAACACAGGAAAGGGAG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTGCAGCATTGTGGCTaGGTAGAAGGCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASLQHCG*VEGSKE
Trigger: CTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACTGCAGCATTGTGGCTaGGTAGAAGGCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLLQHCG*VEGSKE
Trigger: CTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAAATACAGCGACCCATaGACTCGTCAGCACCATAGG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVKYSDP*TRQHHR
Trigger: CCTATGGTGCTGACGAGTTCATGGGTCGCTGTATTT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTCAAAGCCAGGGATGTaGTGGATGGCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSKPGM*WMAGFS
Trigger: AGAGAAGCCAGCCATCCATCACATCCCTGGCTTTGA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTCAAAGCCAGGGATGTaGTGGATGGCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASSKPGM*WMAGFS
Trigger: AGAGAAGCCAGCCATCCATCACATCCCTGGCTTTGA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTGCTCCACCAGTCAATaGACTCCTCCTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWCSTSQ*TPPPGQ
Trigger: CTGTCCAGGAGGAGGAGTTCATTGACTGGTGGAGCA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATGCCCCGGTAGAGCTTaGAGGTGTTACAAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLCPGRA*RCYKSR
Trigger: CCGACTTTTGTAACACCTTCAAGCTCTACCGGGGCA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATGCCCCGGTAGAGCTTaGAGGTGTTACAAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGCPGRA*RCYKSR
Trigger: CCGACTTTTGTAACACCTTCAAGCTCTACCGGGGCA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCATAATCGTAGAGTGTaGTCTTCAGGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEHNRRV*SSGPSP
Trigger: TGGAGAAGGACCTGAAGATCACACTCTACGATTATG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCTCCAGGATCTTGCTaGAGAGCATTTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSPGSC*RAFSQQ
Trigger: TTGCTGGGAAAATGCTCTGCAGCAAGATCCTGGAGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAGGTCTTCCACCTTCTaGTCACTGTGTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVRSSTF*SLCSTS
Trigger: ACTGGTGGAACACAGTGAGCAGAAGGTGGAAGACCT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCTCGGAGGAACACTGTaGCTTCAGAGCCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWLGGTL*LQSQVD
Trigger: GTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGAAGGCATCTGTCTTaGGGTACTCCAGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEGRHLS*GTPGGT
Trigger: AGTTCCACCTGGAGTACCGCAAGACAGATGCCTTCC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATCCCATAGTCAAAGATaGAGGAGATTGTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEASHSQR*RRLWVC
Trigger: ACAGACCCACAATCTCCTGCATCTTTGACTATGGGA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCACGTGCTGGGATCTTaGTCTCTGTCTTGTCGAGTC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASHVLGS*SLSCRV
Trigger: GACTCGACAAGACAGAGAGCAAGATCCCAGCACGTG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCACGTGCTGGGATCTTaGTCTCTGTCTTGTCGAGTC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSHVLGS*SLSCRV
Trigger: GACTCGACAAGACAGAGAGCAAGATCCCAGCACGTG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCTTCCCATCGTCTCATaGTCCTTGACCACCACGAGA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAALPIVS*SLTTTR
Trigger: TCTCGTGGTGGTCAAGGACCATGAGACGATGGGAAG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGCAGCTTTCTAGGTaGGGCAGAGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGQQLSR*GRASFS
Trigger: AGAAAAAGAAGCTCTGCCCCACCTAGAAAGCTGCTG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCACATACCCAAGTAGGTaGTGGCCACAGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGTYPSR*WPQCHC
Trigger: ACAATGACACTGTGGCCACCACCTACTTGGGTATGT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTGTGTTCCACCAGTTTaGTCTCCAGGGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGCVPPV*SPGTTE
Trigger: TTCTGTTGTCCCTGGAGACCAAACTGGTGGAACACA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCATCCTGCAGCATTGTaGCTGAGTAGAAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVHPAAL*LSRRQQ
Trigger: TTGCTGCCTTCTACTCAGCCACAATGCTGCAGGATG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAATGCTGACCTCGAACTaGATGGCGTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGMLTSN*MASSTS
Trigger: GGATGTGGATGACGCCATCCAGTTCGAGGTCAGCAT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATGCTGACCTCGAACTaGATGGCGTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAMLTSN*MASSTS
Trigger: GGATGTGGATGACGCCATCCAGTTCGAGGTCAGCAT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCACTGATCAAGGTGGGTaGCAGAAGGTATCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSTDQGG*QKVSRG
Trigger: TCCACGAGATACCTTCTGCCACCCACCTTGATCAGT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTTGCGGTACTCCAGGTaGAACTTCCAGCCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASLRYSR*NFQPKR
Trigger: TCTCTTCGGCTGGAAGTTCCACCTGGAGTACCGCAA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTTGCGGTACTCCAGGTaGAACTTCCAGCCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPLRYSR*NFQPKR
Trigger: TCTCTTCGGCTGGAAGTTCCACCTGGAGTACCGCAA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTTGCGGTACTCCAGGTaGAACTTCCAGCCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEELRYSR*NFQPKR
Trigger: TCTCTTCGGCTGGAAGTTCCACCTGGAGTACCGCAA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGGGTTTGATCCCAGGTaGGATTCAGGGTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSGFDPR*DSGCSS
Trigger: AGAAGAACACCCTGAATCCCACCTGGGATCAAACCC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCATCCGTTCCAGGCTTaGCTGACAAATACAGCGACC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSHPFQA*LTNTAT
Trigger: GGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGCTGCCCCGGGTCAGTaGGAACCAGGCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRAAPGQ*EPGQAG
Trigger: CCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGCCTCCCTTTGAGGTaGTGGGTAAGGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGGLPLR*WVRQIC
Trigger: ACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGAACCATGTAGATGTTaGCCTCCCTTTGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSEPCRC*PPFEVV
Trigger: CACCACCTCAAAGGGAGGCCAACATCTACATGGTTC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTAGGCCAGGATCTCAATaGCAGTACGTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPRPGSQ*QYVGEL
Trigger: CAGCTCTCCAACGTACTGCCATTGAGATCCTGGCCT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGCCAGGATCTCAATaGCAGTACGTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAARPGSQ*QYVGEL
Trigger: CAGCTCTCCAACGTACTGCCATTGAGATCCTGGCCT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGGGGGAAGAGATGCTaGCCATCTGATAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSWGKRC*PSDSSS
Trigger: TGAAGAGCTATCAGATGGCCAGCATCTCTTCCCCCA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTCTCCAGGGAGCGAATaGTACACTGACCCACAACTG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEESPGSE*YTDPQL
Trigger: CAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTCTCCAGGGAGCGAATaGTACACTGACCCACAACTG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSPGSE*YTDPQL
Trigger: CAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCTCCAGGGAGCGAATaGTACACTGACCCACAACTG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSPGSE*YTDPQL
Trigger: CAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTATGAACTCCTCCTCCTaGACAGGAATGAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASMNSSS*TGMRGS
Trigger: GGAGCCTCTCATTCCTGTCCAGGAGGAGGAGTTCAT...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATGAACTCCTCCTCCTaGACAGGAATGAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAMNSSS*TGMRGS
Trigger: GGAGCCTCTCATTCCTGTCCAGGAGGAGGAGTTCAT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCATGAACTCCTCCTCCTaGACAGGAATGAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSMNSSS*TGMRGS
Trigger: GGAGCCTCTCATTCCTGTCCAGGAGGAGGAGTTCAT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTGCCATTGGGGTCCTTaGGCTGTAAGCCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSCHWGP*AVSQML
Trigger: GAGCATTTGGCTTACAGCCCAAGGACCCCAATGGCA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTGCCATTGGGGTCCTTaGGCTGTAAGCCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAACHWGP*AVSQML
Trigger: GAGCATTTGGCTTACAGCCCAAGGACCCCAATGGCA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATGCCATTGGGGTCCTTaGGCTGTAAGCCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGCHWGP*AVSQML
Trigger: GAGCATTTGGCTTACAGCCCAAGGACCCCAATGGCA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAGAAGGCATCCTTCTTaGCAACAGCACAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGRRHPS*QQHRLA
Trigger: AGCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCATTGTCCCAGATCTaGAAGACCACACGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSLSQI*KTTRAG
Trigger: CCCAGCACGTGTGGTCTTCCAGATCTGGGACAATGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTCATTGTCCCAGATCTaGAAGACCACACGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSLSQI*KTTRAG
Trigger: CCCAGCACGTGTGGTCTTCCAGATCTGGGACAATGA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCATTGTCCCAGATCTaGAAGACCACACGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLSLSQI*KTTRAG
Trigger: CCCAGCACGTGTGGTCTTCCAGATCTGGGACAATGA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCAAGGTGTCATCCAGCTaGTCCAAGGAGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSKVSSS*SKEHFS
Trigger: TGAGAAGTGCTCCTTGGACCAGCTGGATGACACCTT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGACACAAACCATTCTaGGTGGAAGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVGHKPF*VEGVIQ
Trigger: CTGGATGACACCTTCCACCCAGAATGGTTTGTGTCC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGGTCAGTGGCTTGTaGACTCTTGAGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEQVSGL*TLEYTC
Trigger: GCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTAGAGGAATACCTTTaGGGTCCCACTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEELEEYL*GPTQSP
Trigger: AGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTAGAGGAATACCTTTaGGGTCCCACTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSLEEYL*GPTQSP
Trigger: AGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACTAGAGGAATACCTTTaGGGTCCCACTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGLEEYL*GPTQSP
Trigger: AGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAAGAAGTTCTGAGCTCTaGTCTAGAGGAATACCTTTG +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEARSSEL*SRGIPL
Trigger: CAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGAGAAAAGAGTCTCATTaGAGAGTGGGCTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQERKESH*RVGYFP
Trigger: AGGGAAATAGCCCACTCTTCAATGAGACTCTTTTCT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCCTCAGCAAACTGATTaGATTCCTTCTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGPQQTD*IPSHPQ
Trigger: CTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATTTCCCTCAGCAAACTaGTTGAATTCCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAFPSAN*LNSFSS
Trigger: GGATGAGAAGGAATTCAATCAGTTTGCTGAGGGAAA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCATCAACAGCCCGATTaGGGTCTGTGGACCATTCTT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSHQQPD*GLWTIL
Trigger: AAGAATGGTCCACAGACCTCAATCGGGCTGTTGATG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCATCAACAGCCCGATTaGGGTCTGTGGACCATTCTT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPHQQPD*GLWTIL
Trigger: AAGAATGGTCCACAGACCTCAATCGGGCTGTTGATG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCATCAACAGCCCGATTaGGGTCTGTGGACCATTCTT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEHQQPD*GLWTIL
Trigger: AAGAATGGTCCACAGACCTCAATCGGGCTGTTGATG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACTGTCTTCTGGCTTTaGTGCAGGAAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTVFWL*CRKETM
Trigger: CATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGAAATACAGCGACCCATaGACTCGTCAGCACCATAGG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEKYSDP*TRQHHR
Trigger: CCTATGGTGCTGACGAGTTCATGGGTCGCTGTATTT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCCCTATGGAGATCTTaGTGTAAGGGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSLWRS*CKGHTC
Trigger: GCAAGTGTGACCCTTACATCAAGATCTCCATAGGGA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCATAATCGTAGAGTGTaGTCTTCAGGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGHNRRV*SSGPSP
Trigger: TGGAGAAGGACCTGAAGATCACACTCTACGATTATG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTGTTCTCCAGGTCTATaGCCGTCTCCCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASCSPGL*PSPQSS
Trigger: AGAAGATTGGGGAGACGGTCATAGACCTGGAGAACA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATCAAAGCCAAAGATCTaGTTGACGTTGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEASKPKI*LTLSIT
Trigger: TGTGATGGACAACGTCAAGCAGATCTTTGGCTTTGA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCTCCAGGATCTTGCTaGAGAGCATTTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSPGSC*RAFSQQ
Trigger: TTGCTGGGAAAATGCTCTGCAGCAAGATCCTGGAGA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGTCTTCCACCTTCTaGTCACTGTGTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAARSSTF*SLCSTS
Trigger: ACTGGTGGAACACAGTGAGCAGAAGGTGGAAGACCT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAAGGTCTTCCACCTTCTaGTCACTGTGTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLRSSTF*SLCSTS
Trigger: ACTGGTGGAACACAGTGAGCAGAAGGTGGAAGACCT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTAGGTCTTCCACCTTCTaGTCACTGTGTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPRSSTF*SLCSTS
Trigger: ACTGGTGGAACACAGTGAGCAGAAGGTGGAAGACCT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAACACGCTTGTCACCCTaGAGCATCCAGATGATGATG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLTRLSP*SIQMMM
Trigger: CATCATCATCTGGATGCTGCAGGGTGACAAGCGTGT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGGAAGGCATCTGTCTTaGGGTACTCCAGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWGRHLS*GTPGGT
Trigger: AGTTCCACCTGGAGTACCGCAAGACAGATGCCTTCC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCCCATAGTCAAAGATaGAGGAGATTGTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSHSQR*RRLWVC
Trigger: ACAGACCCACAATCTCCTGCATCTTTGACTATGGGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGATCCTTGAAGTTTCATaGATCTCAAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEILEVS*ISKPGM
Trigger: CATCCCTGGCTTTGAGATGCATGAAACTTCAAGGAT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCATACAGGCTCCAGGGTaGAAGGGATGTAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVIQAPG*KGCSYP
Trigger: AGGATAACTACATCCCTTGCACCCTGGAGCCTGTAT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAAGTCTCATTGAAGAGTaGGCTATTTCCCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEASLIEE*AISLLD
Trigger: ATCCAGAAGGGAAATAGCCCACTCTTCAATGAGACT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTACCCAAGTAGGTGGTaGCCACAGTGTCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASYPSRW*PQCHCE
Trigger: CTCACAATGACACTGTGGCCACCACCTACTTGGGTA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTACCCAAGTAGGTGGTaGCCACAGTGTCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPYPSRW*PQCHCE
Trigger: CTCACAATGACACTGTGGCCACCACCTACTTGGGTA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATACCCAAGTAGGTGGTaGCCACAGTGTCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGYPSRW*PQCHCE
Trigger: CTCACAATGACACTGTGGCCACCACCTACTTGGGTA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCATCCTGCAGCATTGTaGCTGAGTAGAAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSHPAAL*LSRRQQ
Trigger: TTGCTGCCTTCTACTCAGCCACAATGCTGCAGGATG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGATGCTGACCTCGAACTaGATGGCGTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWMLTSN*MASSTS
Trigger: GGATGTGGATGACGCCATCCAGTTCGAGGTCAGCAT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACTGATCAAGGTGGGTaGCAGAAGGTATCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTDQGG*QKVSRG
Trigger: TCCACGAGATACCTTCTGCCACCCACCTTGATCAGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCACTGATCAAGGTGGGTaGCAGAAGGTATCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSTDQGG*QKVSRG
Trigger: TCCACGAGATACCTTCTGCCACCCACCTTGATCAGT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGGGTTTGATCCCAGGTaGGATTCAGGGTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASGFDPR*DSGCSS
Trigger: AGAAGAACACCCTGAATCCCACCTGGGATCAAACCC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGGTTTGATCCCAGGTaGGATTCAGGGTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLGFDPR*DSGCSS
Trigger: AGAAGAACACCCTGAATCCCACCTGGGATCAAACCC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCATCCGTTCCAGGCTTaGCTGACAAATACAGCGACC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWHPFQA*LTNTAT
Trigger: GGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGGCCTCCCTTTGAGGTaGTGGGTAAGGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWGLPLR*WVRQIC
Trigger: ACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGAACCATGTAGATGTTaGCCTCCCTTTGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASEPCRC*PPFEVV
Trigger: CACCACCTCAAAGGGAGGCCAACATCTACATGGTTC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTGGGGGAAGAGATGCTaGCCATCTGATAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSWGKRC*PSDSSS
Trigger: TGAAGAGCTATCAGATGGCCAGCATCTCTTCCCCCA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGATGAACTCCTCCTCCTaGACAGGAATGAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWMNSSS*TGMRGS
Trigger: GGAGCCTCTCATTCCTGTCCAGGAGGAGGAGTTCAT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGATGGCTGGATCTTCTaGGAGGGGATAAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEADGWIF*EGINFE
Trigger: TTCAAAATTTATCCCCTCCCAGAAGATCCAGCCATC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACAATCTTCTCATCCTTaGAGAGCAGGTCATAATCGT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAQSSHP*RAGHNR
Trigger: ACGATTATGACCTGCTCTCCAAGGATGAGAAGATTG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCCCCTGCTCGATATCTaGCTGCAGAGGACTATAAAG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSPLLDI*LQRTIK
Trigger: CTTTATAGTCCTCTGCAGCCAGATATCGAGCAGGGG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCCCTGCTCGATATCTaGCTGCAGAGGACTATAAAG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPPLLDI*LQRTIK
Trigger: CTTTATAGTCCTCTGCAGCCAGATATCGAGCAGGGG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCCGGCCCAGCACCTTTaGAAATATGTCAATCCACAT +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVPAQHL*KYVNPH
Trigger: ATGTGGATTGACATATTTCCAAAGGTGCTGGGCCGG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGAAGACCACACGTGCTaGGATCTTGCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPEDHTC*DLALCL
Trigger: AAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGAAGACCACACGTGCTaGGATCTTGCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAEDHTC*DLALCL
Trigger: AAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAAGGTGTCATCCAGCTaGTCCAAGGAGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSKVSSS*SKEHFS
Trigger: TGAGAAGTGCTCCTTGGACCAGCTGGATGACACCTT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAAAGGTGTCATCCAGCTaGTCCAAGGAGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLKVSSS*SKEHFS
Trigger: TGAGAAGTGCTCCTTGGACCAGCTGGATGACACCTT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACAAACCATTCTGGGTaGAAGGTGTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTNHSG*KVSSSW
Trigger: CCAGCTGGATGACACCTTCCACCCAGAATGGTTTGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGACAAACCATTCTGGGTaGAAGGTGTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEETNHSG*KVSSSW
Trigger: CCAGCTGGATGACACCTTCCACCCAGAATGGTTTGT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGACACAAACCATTCTaGGTGGAAGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEGHKPF*VEGVIQ
Trigger: CTGGATGACACCTTCCACCCAGAATGGTTTGTGTCC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAAGCCAAAGATCTGCTTaGCGTTGTCCATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLSQRSA*RCPSQH
Trigger: ATGCTGTGATGGACAACGTCAAGCAGATCTTTGGCT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGAGCCAAAGATCTGCTTaGCGTTGTCCATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEESQRSA*RCPSQH
Trigger: ATGCTGTGATGGACAACGTCAAGCAGATCTTTGGCT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCTCCCTTTCCTGTGTTaGGCTCTGCATAAGGATCTG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWLPFLC*ALHKDL
Trigger: CAGATCCTTATGCAGAGCTCAACACAGGAAAGGGAG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCCTCAGCAAACTGATTaGATTCCTTCTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSPQQTD*IPSHPQ
Trigger: CTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTTTCCCTCAGCAAACTaGTTGAATTCCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGFPSAN*LNSFSS
Trigger: GGATGAGAAGGAATTCAATCAGTTTGCTGAGGGAAA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCATCAACAGCCCGATTaGGGTCTGTGGACCATTCTT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWHQQPD*GLWTIL
Trigger: AAGAATGGTCCACAGACCTCAATCGGGCTGTTGATG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTCCCTATGGAGATCTTaGTGTAAGGGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPSLWRS*CKGHTC
Trigger: GCAAGTGTGACCCTTACATCAAGATCTCCATAGGGA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCCCTATGGAGATCTTaGTGTAAGGGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLSLWRS*CKGHTC
Trigger: GCAAGTGTGACCCTTACATCAAGATCTCCATAGGGA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTCTTGTACGGGGAGGTaGACCACAGGAAAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSSCTGR*TTGKKY
Trigger: ATACTTCTTTCCTGTGGTTCACCTCCCCGTACAAGA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCAAAGCCAAAGATCTaGTTGACGTTGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSKPKI*LTLSIT
Trigger: TGTGATGGACAACGTCAAGCAGATCTTTGGCTTTGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTCTCCAGGATCTTGCTaGAGAGCATTTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAASPGSC*RAFSQQ
Trigger: TTGCTGGGAAAATGCTCTGCAGCAAGATCCTGGAGA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTCTTCTCCAGGATCTTaGTGCAGAGCATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSSSPGS*CRAFSQ
Trigger: CTGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCTTCTCCAGGATCTTaGTGCAGAGCATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSSPGS*CRAFSQ
Trigger: CTGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGACACGCTTGTCACCCTaGAGCATCCAGATGATGATG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWTRLSP*SIQMMM
Trigger: CATCATCATCTGGATGCTGCAGGGTGACAAGCGTGT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTTCAGAAAGATGGTCTaGAGCTTCCCACAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEFRKMV*SFPQFL
Trigger: CAGGAACTGTGGGAAGCTGCAGACCATCTTTCTGAA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATTCAGAAAGATGGTCTaGAGCTTCCCACAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGFRKMV*SFPQFL
Trigger: CAGGAACTGTGGGAAGCTGCAGACCATCTTTCTGAA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGATACAGGCTCCAGGGTaGAAGGGATGTAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEIQAPG*KGCSYP
Trigger: AGGATAACTACATCCCTTGCACCCTGGAGCCTGTAT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAATACAGGCTCCAGGGTaGAAGGGATGTAGTTATCCT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGIQAPG*KGCSYP
Trigger: AGGATAACTACATCCCTTGCACCCTGGAGCCTGTAT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTGCACATCTGTCTTCTaGTTGTGTTCTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVCTSVF*LCSSNP
Trigger: GGGATTCGAAGAACACAAGCAGAAGACAGATGTGCA...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCCTTTCACTGTCTTCTaGTCAAAAAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGPFTVF*SKRDTN
Trigger: GTTTGTGTCCCTTTTTGAGCAGAAGACAGTGAAAGG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCAGCAGCTTTCTAGGTaGGGCAGAGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAQQLSR*GRASFS
Trigger: AGAAAAAGAAGCTCTGCCCCACCTAGAAAGCTGCTG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCAGCTTTCTAGGTaGGGCAGAGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEQQLSR*GRASFS
Trigger: AGAAAAAGAAGCTCTGCCCCACCTAGAAAGCTGCTG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACATACCCAAGTAGGTaGTGGCCACAGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAATYPSR*WPQCHC
Trigger: ACAATGACACTGTGGCCACCACCTACTTGGGTATGT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAACATACCCAAGTAGGTaGTGGCCACAGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLTYPSR*WPQCHC
Trigger: ACAATGACACTGTGGCCACCACCTACTTGGGTATGT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATGTGTTCCACCAGTTTaGTCTCCAGGGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGCVPPV*SPGTTE
Trigger: TTCTGTTGTCCCTGGAGACCAAACTGGTGGAACACA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATGTGTTCCACCAGTTTaGTCTCCAGGGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLCVPPV*SPGTTE
Trigger: TTCTGTTGTCCCTGGAGACCAAACTGGTGGAACACA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCATCCTGCAGCATTGTaGCTGAGTAGAAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWHPAAL*LSRRQQ
Trigger: TTGCTGCCTTCTACTCAGCCACAATGCTGCAGGATG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGACCGCCCGGCTGTACTaGGTGGTGGAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWTARLY*VVEAKG
Trigger: GCCCTTGGCCTCCACCACCCAGTACAGCCGGGCGGT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTTGACCACAATAGGTaGACAGTAGAGGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASLDHNR*TVEVLS
Trigger: AGAGAGGACCTCTACTGTCCACCTATTGTGGTCAAG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACTTGACCACAATAGGTaGACAGTAGAGGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLLDHNR*TVEVLS
Trigger: AGAGAGGACCTCTACTGTCCACCTATTGTGGTCAAG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTTCTCCGATGACAGATaGATCATCTGTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSFSDDR*IICLLL
Trigger: CAGGAGGAGACAGATGATCCATCTGTCATCGGAGAA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTTCTCCGATGACAGATaGATCATCTGTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEFSDDR*IICLLL
Trigger: CAGGAGGAGACAGATGATCCATCTGTCATCGGAGAA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAATCTTCTCATCCTTaGAGAGCAGGTCATAATCGT +
Preference number: 4 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGQSSHP*RAGHNR
Trigger: ACGATTATGACCTGCTCTCCAAGGATGAGAAGATTG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCCCCTGCTCGATATCTaGCTGCAGAGGACTATAAAG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWPLLDI*LQRTIK
Trigger: CTTTATAGTCCTCTGCAGCCAGATATCGAGCAGGGG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACCGGCCCAGCACCTTTaGAAATATGTCAATCCACAT +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLPAQHL*KYVNPH
Trigger: ATGTGGATTGACATATTTCCAAAGGTGCTGGGCCGG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTAGAAGGCATCCTTCTTaGCAACAGCACAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPRRHPS*QQHRLA
Trigger: AGCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTAGAAGGCATCCTTCTTaGCAACAGCACAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASRRHPS*QQHRLA
Trigger: AGCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCT...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAAGGTGTCATCCAGCTaGTCCAAGGAGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWKVSSS*SKEHFS
Trigger: TGAGAAGTGCTCCTTGGACCAGCTGGATGACACCTT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGGACACAAACCATTCTaGGTGGAAGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWGHKPF*VEGVIQ
Trigger: CTGGATGACACCTTCCACCCAGAATGGTTTGTGTCC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCAGAAAAGAGTCTCATTaGAGAGTGGGCTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSRKESH*RVGYFP
Trigger: AGGGAAATAGCCCACTCTTCAATGAGACTCTTTTCT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCTCAGCAAACTGATTaGATTCCTTCTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPPQQTD*IPSHPQ
Trigger: CTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACCTCAGCAAACTGATTaGATTCCTTCTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLPQQTD*IPSHPQ
Trigger: CTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTTCCCTCAGCAAACTaGTTGAATTCCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSFPSAN*LNSFSS
Trigger: GGATGAGAAGGAATTCAATCAGTTTGCTGAGGGAAA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTCTTGTACGGGGAGGTaGACCACAGGAAAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWSCTGR*TTGKKY
Trigger: ATACTTCTTTCCTGTGGTTCACCTCCCCGTACAAGA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGCCAGGGCACGGAGATaGAGAAGCCAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTARARR*RSQSSA
Trigger: GGCCGAGGACTGGCTTCTGCATCTCCGTGCCCTGGC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGCCAGGGCACGGAGATaGAGAAGCCAGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWARARR*RSQSSA
Trigger: GGCCGAGGACTGGCTTCTGCATCTCCGTGCCCTGGC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTCCCATAGTCAAAGATaGAGGAGATTGTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSSHSQR*RRLWVC
Trigger: ACAGACCCACAATCTCCTGCATCTTTGACTATGGGA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCATCCTTGAAGTTTCATaGATCTCAAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVILEVS*ISKPGM
Trigger: CATCCCTGGCTTTGAGATGCATGAAACTTCAAGGAT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCATCCTTGAAGTTTCATaGATCTCAAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSILEVS*ISKPGM
Trigger: CATCCCTGGCTTTGAGATGCATGAAACTTCAAGGAT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATGCACATCTGTCTTCTaGTTGTGTTCTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGCTSVF*LCSSNP
Trigger: GGGATTCGAAGAACACAAGCAGAAGACAGATGTGCA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATGCACATCTGTCTTCTaGTTGTGTTCTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLCTSVF*LCSSNP
Trigger: GGGATTCGAAGAACACAAGCAGAAGACAGATGTGCA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATTCATGTTCACTTTCTaGAACAATCTCCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAFMFTF*NNLQGH
Trigger: ATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCAGTCTCATTGAAGAGTaGGCTATTTCCCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSLIEE*AISLLD
Trigger: ATCCAGAAGGGAAATAGCCCACTCTTCAATGAGACT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGACATACCCAAGTAGGTaGTGGCCACAGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWTYPSR*WPQCHC
Trigger: ACAATGACACTGTGGCCACCACCTACTTGGGTATGT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGACCGCCCGGCTGTACTaGGTGGTGGAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMTARLY*VVEAKG
Trigger: GCCCTTGGCCTCCACCACCCAGTACAGCCGGGCGGT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTTCTCCGATGACAGATaGATCATCTGTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWFSDDR*IICLLL
Trigger: CAGGAGGAGACAGATGATCCATCTGTCATCGGAGAA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCAATCTTCTCATCCTTaGAGAGCAGGTCATAATCGT +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSQSSHP*RAGHNR
Trigger: ACGATTATGACCTGCTCTCCAAGGATGAGAAGATTG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTTCACCCCAGGCAGCTaGCGCCCCTCTATCACCTGG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTFTPGS*RPSITW
Trigger: CCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCACACAGGCTGGCTTTaGGGTAGCCTCTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMHTGWL*GSLWPP
Trigger: CGGGGGCCAGAGGCTACCTCAAAGCCAGCCTGTGTG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTTTCCCTCAGCAAACTaGTTGAATTCCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEFPSAN*LNSFSS
Trigger: GGATGAGAAGGAATTCAATCAGTTTGCTGAGGGAAA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGTGCTTCCATCTGGCTaGGGTCCCTCCTGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRVLPSG*GPSCAV
Trigger: GACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCAC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGTAACATCACTTCCATaGAGAGAGTACAGACATCAA +
Preference number: 4 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSVTSLP*REYRHQ
Trigger: TTGATGTCTGTACTCTCTTCATGGAAGTGATGTTAC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTCAAAGCCAAAGATCTaGTTGACGTTGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEESKPKI*LTLSIT
Trigger: TGTGATGGACAACGTCAAGCAGATCTTTGGCTTTGA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGCTTCCCACAGTTCCTaGCGCAGTAGCTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMASHSS*RSSWGP
Trigger: GGGGCCCCAGCTACTGCGGCAGGAACTGTGGGAAGC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCTCGCCCTCGGCCTCTaGCTGCCTGTGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMLALGL*LPVPLQ
Trigger: CTGAAGAGGCACAGGCAGGCAGAGGCCGAGGGCGAG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTCTTGTCATCCACCATaGCGCCCAGGGCCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWSCHPP*RPGPPR
Trigger: TCGAGGGGGCCCTGGGCGGCATGGTGGATGACAAGA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTCCCATAGTCAAAGATaGAGGAGATTGTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWSHSQR*RRLWVC
Trigger: ACAGACCCACAATCTCCTGCATCTTTGACTATGGGA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCCTTGAAGTTTCATaGATCTCAAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAILEVS*ISKPGM
Trigger: CATCCCTGGCTTTGAGATGCATGAAACTTCAAGGAT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTGCACATCTGTCTTCTaGTTGTGTTCTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWCTSVF*LCSSNP
Trigger: GGGATTCGAAGAACACAAGCAGAAGACAGATGTGCA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTTCACTGTCTTCTaGTCAAAAAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASPFTVF*SKRDTN
Trigger: GTTTGTGTCCCTTTTTGAGCAGAAGACAGTGAAAGG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCCTTTCACTGTCTTCTaGTCAAAAAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSPFTVF*SKRDTN
Trigger: GTTTGTGTCCCTTTTTGAGCAGAAGACAGTGAAAGG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCAGAGAGGCTGGGGGTaGCAAGGACCTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRQRGWG*QGPPGV
Trigger: CACTCCAGGAGGTCCTTGCCACCCCCAGCCTCTCTG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCACAGCTCCTGGGGGTaGCGTGTAGGACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRHSSWG*RVGHLQ
Trigger: CTGCAGGTGTCCTACACGCCACCCCCAGGAGCTGTG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAAGTCTCATTGAAGAGTaGGCTATTTCCCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSLIEE*AISLLD
Trigger: ATCCAGAAGGGAAATAGCCCACTCTTCAATGAGACT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGATATTTCAGAAAGATaGTCTGCAGCTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSDISER*SAASHS
Trigger: ACTGTGGGAAGCTGCAGACCATCTTTCTGAAATATC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGATATTTCAGAAAGATaGTCTGCAGCTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEDISER*SAASHS
Trigger: ACTGTGGGAAGCTGCAGACCATCTTTCTGAAATATC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGACACTGACCCACAACTaGCCGGCGGCCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWTLTHN*PAAKLA
Trigger: CGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGATGGCTGGATCTTCTaGGAGGGGATAAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLDGWIF*EGINFE
Trigger: TTCAAAATTTATCCCCTCCCAGAAGATCCAGCCATC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGATGGCTGGATCTTCTaGGAGGGGATAAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAADGWIF*EGINFE
Trigger: TTCAAAATTTATCCCCTCCCAGAAGATCCAGCCATC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTCGGGGGCATGGGGATaGCTGGATCTTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWSGAWG*LDLLGG
Trigger: CCCTCCCAGAAGATCCAGCCATCCCCATGCCCCCGA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAATCTTCTCATCCTTaGAGAGCAGGTCATAATCGT +
Preference number: 4 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEQSSHP*RAGHNR
Trigger: ACGATTATGACCTGCTCTCCAAGGATGAGAAGATTG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGAAGTTCTGAGCTCTaGTCTAGAGGAATACCTTTG +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWRSSEL*SRGIPL
Trigger: CAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCTAGCAGAGGTGCGTTaGAGCTGGCAGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWLAEVR*SWQRGW
Trigger: CCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCTAGCAGAGGTGCGTTaGAGCTGGCAGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRLAEVR*SWQRGW
Trigger: CCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTTCACCCCAGGCAGCTaGCGCCCCTCTATCACCTGG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMFTPGS*RPSITW
Trigger: CCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGCCACAGTGTCATTGTaGGTGAGGCGGTCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWATVSL*VRRSQS
Trigger: GGACTGGGACCGCCTCACTCACAATGACACTGTGGC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGTAACATCACTTCCATaGAGAGAGTACAGACATCAA +
Preference number: 4 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAVTSLP*REYRHQ
Trigger: TTGATGTCTGTACTCTCTTCATGGAAGTGATGTTAC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGTAACATCACTTCCATaGAGAGAGTACAGACATCAA +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASVTSLP*REYRHQ
Trigger: TTGATGTCTGTACTCTCTTCATGGAAGTGATGTTAC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTCAAAGCCAAAGATCTaGTTGACGTTGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWSKPKI*LTLSIT
Trigger: TGTGATGGACAACGTCAAGCAGATCTTTGGCTTTGA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCAGGACTGCACTGTCTaGCCACCACACTCCACCACG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTQDCTV*PPHSTT
Trigger: CGTGGTGGAGTGTGGTGGGCAGACAGTGCAGTCCTG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCAGGACTGCACTGTCTaGCCACCACACTCCACCACG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWQDCTV*PPHSTT
Trigger: CGTGGTGGAGTGTGGTGGGCAGACAGTGCAGTCCTG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGGGCCTTGATCCTGTaGTGCTGGCAGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGALIL*CWQKRW
Trigger: CCACCTCTTCTGCCAGCAGCACAGGATCAAGGCCCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCCTTTCACTGTCTTCTaGTCAAAAAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWPFTVF*SKRDTN
Trigger: GTTTGTGTCCCTTTTTGAGCAGAAGACAGTGAAAGG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTTCATGTTCACTTTCTaGAACAATCTCCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVFMFTF*NNLQGH
Trigger: ATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAA...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCAGAGAGGCTGGGGGTaGCAAGGACCTCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMQRGWG*QGPPGV
Trigger: CACTCCAGGAGGTCCTTGCCACCCCCAGCCTCTCTG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCCCACAGCAGCACTCTaGTCCAGGAACGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRPTAAL*SRNGSA
Trigger: AGCTGAGCCGTTCCTGGACCAGAGTGCTGCTGTGGG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGATATTTCAGAAAGATaGTCTGCAGCTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWDISER*SAASHS
Trigger: ACTGTGGGAAGCTGCAGACCATCTTTCTGAAATATC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCACTCCACCACGAGGCTaGGGGAAGAGATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTTPPRG*GKRCWP
Trigger: TGGCCAGCATCTCTTCCCCCAGCCTCGTGGTGGAGT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGACACTGACCCACAACTaGCCGGCGGCCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMTLTHN*PAAKLA
Trigger: CGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGACACAGTAGGTCTGTaGGAGCCCACAGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMDTVGL*EPTASP
Trigger: GGGGCTCGCTGTGGGCTCCCACAGACCTACTGTGTC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAGCCGGAGCAGGTACTaGTCAAGGTGGGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTSRSRY*SRWVAE
Trigger: TTCTGCCACCCACCTTGATCAGTACCTGCTCCGGCT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGTCTGGGGGTATGGTaGTGCTGTACTCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGLGVW*CCTPSL
Trigger: AAGGCTGGGAGTACAGCATCACCATACCCCCAGACC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGAGCAGTAGGCATCGCTaGTGTCGGAGTCCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMSSRHR*CRSPGC
Trigger: ACACCCCGGACTCCGACATCAGCGATGCCTACTGCT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCGAGTTCGCTTGGTCTaGCCAGCAGCTGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRRVRLV*PAAVTL
Trigger: CAAGGTCACAGCTGCTGGGCAGACCAAGCGAACTCG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGCCTCTGCCTGCCTGTaGCTCTTCAGTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTASACL*LFSASI
Trigger: GATGGAAGCACTGAAGAGGCACAGGCAGGCAGAGGC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGAGGGCAAACACAGCTaGAGGTCCCGTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWEGKHS*RSRLLQ
Trigger: CTGGAGAAGACGGGACCTGCAGCTGTGTTTGCCCTC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGAGGGCAAACACAGCTaGAGGTCCCGTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTEGKHS*RSRLLQ
Trigger: CTGGAGAAGACGGGACCTGCAGCTGTGTTTGCCCTC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGCCTTGATCCTGTGCTaGTGGCAGAAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWALILC*WQKRWR
Trigger: CCTCCACCTCTTCTGCCAGCAGCACAGGATCAAGGC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTTCATGTTCACTTTCTaGAACAATCTCCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASFMFTF*NNLQGH
Trigger: ATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGGACCTCCTGGAGTaGGATCTTGGCTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRKDLLE*DLGFPQ
Trigger: CTGGGGGAAGCCAAGATCCCACTCCAGGAGGTCCTT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGAGCTTCAGGCAGAAGTaGGCTCCTCGAAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWSFRQK*APRRAT
Trigger: TGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCCAAGGGCAGGCAGGTaGTGTCGAACTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTPRAGR*CRTCSR
Trigger: ACGGGAACAAGTTCGACACCACCTGCCTGCCCTTGG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCATGTCACACAGGGGCTaGCTGCAGTCTGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTMSHRG*LQSARS
Trigger: GCTCCTTGCAGACTGCAGCCAGCCCCTGTGTGACAT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCCTGCTCCAGGGCAGTaGAGAGCTCACTATGGCCAA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWPAPGQ*RAHYGQ
Trigger: TTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGGGCATGGGGATGGCTaGATCTTCTGGGAGGGGATA +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTGHGDG*IFWEGI
Trigger: TATCCCCTCCCAGAAGATCCAGCCATCCCCATGCCC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGGCATGGGGATGGCTaGATCTTCTGGGAGGGGATA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGHGDG*IFWEGI
Trigger: TATCCCCTCCCAGAAGATCCAGCCATCCCCATGCCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGGGCATGGGGATGGCTaGATCTTCTGGGAGGGGATA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRGHGDG*IFWEGI
Trigger: TATCCCCTCCCAGAAGATCCAGCCATCCCCATGCCC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTGTCCTAAGGGAGCGTaGGTCCACCACCGTGATGAA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRCPKGA*VHHRDE
Trigger: TTCATCACGGTGGTGGACTCACGCTCCCTTAGGACA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGAGCTCATCTGTCAACTaGGCCACCAGGGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMSSSVN*ATRAST
Trigger: TGTGGACGCCCTGGTGGCTCAGTTGACAGATGAGCT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGGATGGACTCTCTGCTaGGTATGGGTCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTGWTLC*VWVAQE
Trigger: TTCCTGTGCGACCCATACTCAGCAGAGAGTCCATCC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGGATGGACTCTCTGCTaGGTATGGGTCGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRGWTLC*VWVAQE
Trigger: TTCCTGTGCGACCCATACTCAGCAGAGAGTCCATCC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCCTCCTGGACAGGAATaGGAGGCTCCTTGTCATCGA +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTPPGQE*EAPCHR
Trigger: TCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGACACGAACCTCCAGTTaGAATTGCCCTCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWTRTSS*NCPPHP
Trigger: TGGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCTCGGAGGAACACTGTaGCTTCAGAGCCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRLGGTL*LQSQVD
Trigger: GTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGGGCTGGCTGCAGTCTaGAAGGAGCTCATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRGLAAV*KELICQ
Trigger: TTGACAGATGAGCTCCTTGCAGACTGCAGCCAGCCC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGGCTGGCTGCAGTCTaGAAGGAGCTCATCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGLAAV*KELICQ
Trigger: TTGACAGATGAGCTCCTTGCAGACTGCAGCCAGCCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCTGATGACACAGGACTaGACTGTCTGCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRLMTQD*TVCPPH
Trigger: GTGTGGTGGGCAGACAGTGCAGTCCTGTGTCATCAG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCTGATGACACAGGACTaGACTGTCTGCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTLMTQD*TVCPPH
Trigger: GTGTGGTGGGCAGACAGTGCAGTCCTGTGTCATCAG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGCCGTGACTCCACATaGTCAGGAACCAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGRDST*SGTKPC
Trigger: ACAAGGCTTGGTTCCTGAGCATGTGGAGTCACGGCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTTCATGTTCACTTTCTaGAACAATCTCCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWFMFTF*NNLQGH
Trigger: ATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCTCGAAAAATCAGGCTaGCAACTGGATCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWLEKSG*QLDRCA
Trigger: GGCGCAGCGATCCAGTTGCCAGCCTGATTTTTCGAG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGCCTTCAGAGCCAAGTaGACCTGCTCCAGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRAFRAK*TCSRLA
Trigger: AGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGCCTTCAGAGCCAAGTaGACCTGCTCCAGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWAFRAK*TCSRLA
Trigger: AGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTTCAGTGCTTCCATCTaGCTGAGGTCCCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMFSASI*LRSLLR
Trigger: GCGCAGGAGGGACCTCAGCCAGATGGAAGCACTGAA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGACTTCTCAGCCGTCTTaGCTGGCTTGGGCATTCGGT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWTSQPS*LAWAFG
Trigger: ACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTCGTCTCATGGTCCTTaGCCACCACGAGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTSSHGP*PPREVL
Trigger: CAGAACTTCTCGTGGTGGTCAAGGACCATGAGACGA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTCAAAGCCAGGGATGTaGTGGATGGCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWSKPGM*WMAGFS
Trigger: AGAGAAGCCAGCCATCCATCACATCCCTGGCTTTGA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCCTCCTGGACAGGAATaGGAGGCTCCTTGTCATCGA +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMPPGQE*EAPCHR
Trigger: TCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTGCTCCACCAGTCAATaGACTCCTCCTCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMCSTSQ*TPPPGQ
Trigger: CTGTCCAGGAGGAGGAGTTCATTGACTGGTGGAGCA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTGCCCCGGTAGAGCTTaGAGGTGTTACAAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTCPGRA*RCYKSR
Trigger: CCGACTTTTGTAACACCTTCAAGCTCTACCGGGGCA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGGAAGGCATCTGTCTTaGGGTACTCCAGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRGRHLS*GTPGGT
Trigger: AGTTCCACCTGGAGTACCGCAAGACAGATGCCTTCC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCTTCCCATCGTCTCATaGTCCTTGACCACCACGAGA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWLPIVS*SLTTTR
Trigger: TCTCGTGGTGGTCAAGGACCATGAGACGATGGGAAG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGATGCTGACCTCGAACTaGATGGCGTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWMLTSN*MASSTS
Trigger: GGATGTGGATGACGCCATCCAGTTCGAGGTCAGCAT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTTGCGGTACTCCAGGTaGAACTTCCAGCCGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWLRYSR*NFQPKR
Trigger: TCTCTTCGGCTGGAAGTTCCACCTGGAGTACCGCAA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGCCTCCCTTTGAGGTaGTGGGTAAGGCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGLPLR*WVRQIC
Trigger: ACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAGGCCAGGATCTCAATaGCAGTACGTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTRPGSQ*QYVGEL
Trigger: CAGCTCTCCAACGTACTGCCATTGAGATCCTGGCCT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGAGGCCAGGATCTCAATaGCAGTACGTTGGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWRPGSQ*QYVGEL
Trigger: CAGCTCTCCAACGTACTGCCATTGAGATCCTGGCCT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTCTCCAGGGAGCGAATaGTACACTGACCCACAACTG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRSPGSE*YTDPQL
Trigger: CAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTGCCATTGGGGTCCTTaGGCTGTAAGCCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTCHWGP*AVSQML
Trigger: GAGCATTTGGCTTACAGCCCAAGGACCCCAATGGCA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGGTCACACTTGCCATTaGGGTCCTTGGGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMGHTCH*GPWAVS
Trigger: GCTTACAGCCCAAGGACCCCAATGGCAAGTGTGACC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTCATTGTCCCAGATCTaGAAGACCACACGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTSLSQI*KTTRAG
Trigger: CCCAGCACGTGTGGTCTTCCAGATCTGGGACAATGA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCAGGTCAGTGGCTTGTaGACTCTTGAGTACACCTGC +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWQVSGL*TLEYTC
Trigger: GCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCTAGAGGAATACCTTTaGGGTCCCACTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTLEEYL*GPTQSP
Trigger: AGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGATGTTCTGGTTCCACTaGGGGTTAGCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWMFWFH*GLAVFS
Trigger: GGAGAAGACAGCTAACCCTCAGTGGAACCAGAACAT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCTGCAGCATTGTGGCTaGGTAGAAGGCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMLQHCG*VEGSKE
Trigger: CTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCATCAACAGCCCGATTaGGGTCTGTGGACCATTCTT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTHQQPD*GLWTIL
Trigger: AAGAATGGTCCACAGACCTCAATCGGGCTGTTGATG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAATACAGCGACCCATaGACTCGTCAGCACCATAGG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRKYSDP*TRQHHR
Trigger: CCTATGGTGCTGACGAGTTCATGGGTCGCTGTATTT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTGTTCTCCAGGTCTATaGCCGTCTCCCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWCSPGL*PSPQSS
Trigger: AGAAGATTGGGGAGACGGTCATAGACCTGGAGAACA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCACACGCTTGTCACCCTaGAGCATCCAGATGATGATG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRTRLSP*SIQMMM
Trigger: CATCATCATCTGGATGCTGCAGGGTGACAAGCGTGT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCACGTGCTGGGATCTTaGTCTCTGTCTTGTCGAGTC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMHVLGS*SLSCRV
Trigger: GACTCGACAAGACAGAGAGCAAGATCCCAGCACGTG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCTTCCCATCGTCTCATaGTCCTTGACCACCACGAGA +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMLPIVS*SLTTTR
Trigger: TCTCGTGGTGGTCAAGGACCATGAGACGATGGGAAG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTACCCAAGTAGGTGGTaGCCACAGTGTCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTYPSRW*PQCHCE
Trigger: CTCACAATGACACTGTGGCCACCACCTACTTGGGTA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGGGTTTGATCCCAGGTaGGATTCAGGGTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTGFDPR*DSGCSS
Trigger: AGAAGAACACCCTGAATCCCACCTGGGATCAAACCC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGAACCATGTAGATGTTaGCCTCCCTTTGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMREPCRC*PPFEVV
Trigger: CACCACCTCAAAGGGAGGCCAACATCTACATGGTTC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTGGGGGAAGAGATGCTaGCCATCTGATAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWWGKRC*PSDSSS
Trigger: TGAAGAGCTATCAGATGGCCAGCATCTCTTCCCCCA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTGCCATTGGGGTCCTTaGGCTGTAAGCCAAATGCTC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMCHWGP*AVSQML
Trigger: GAGCATTTGGCTTACAGCCCAAGGACCCCAATGGCA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCCCCTGCTCGATATCTaGCTGCAGAGGACTATAAAG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTPLLDI*LQRTIK
Trigger: CTTTATAGTCCTCTGCAGCCAGATATCGAGCAGGGG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGAAGACCACACGTGCTaGGATCTTGCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTEDHTC*DLALCL
Trigger: AAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGACAAACCATTCTGGGTaGAAGGTGTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWTNHSG*KVSSSW
Trigger: CCAGCTGGATGACACCTTCCACCCAGAATGGTTTGT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCACAAACCATTCTGGGTaGAAGGTGTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTTNHSG*KVSSSW
Trigger: CCAGCTGGATGACACCTTCCACCCAGAATGGTTTGT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGACACAAACCATTCTaGGTGGAAGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGHKPF*VEGVIQ
Trigger: CTGGATGACACCTTCCACCCAGAATGGTTTGTGTCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCTAGAGGAATACCTTTaGGGTCCCACTCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMLEEYL*GPTQSP
Trigger: AGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAGCCAAAGATCTGCTTaGCGTTGTCCATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTSQRSA*RCPSQH
Trigger: ATGCTGTGATGGACAACGTCAAGCAGATCTTTGGCT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAGCCAAAGATCTGCTTaGCGTTGTCCATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRSQRSA*RCPSQH
Trigger: ATGCTGTGATGGACAACGTCAAGCAGATCTTTGGCT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGATGTTCTGGTTCCACTaGGGGTTAGCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMMFWFH*GLAVFS
Trigger: GGAGAAGACAGCTAACCCTCAGTGGAACCAGAACAT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGACTGTCTTCTGGCTTTaGTGCAGGAAGGAGACGATG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMTVFWL*CRKETM
Trigger: CATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTGTTCTCCAGGTCTATaGCCGTCTCCCCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMCSPGL*PSPQSS
Trigger: AGAAGATTGGGGAGACGGTCATAGACCTGGAGAACA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTCTTGTACGGGGAGGTaGACCACAGGAAAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRSCTGR*TTGKKY
Trigger: ATACTTCTTTCCTGTGGTTCACCTCCCCGTACAAGA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTCTTGTACGGGGAGGTaGACCACAGGAAAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWSCTGR*TTGKKY
Trigger: ATACTTCTTTCCTGTGGTTCACCTCCCCGTACAAGA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTCTCCAGGATCTTGCTaGAGAGCATTTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRSPGSC*RAFSQQ
Trigger: TTGCTGGGAAAATGCTCTGCAGCAAGATCCTGGAGA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTCTTCTCCAGGATCTTaGTGCAGAGCATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRSSPGS*CRAFSQ
Trigger: CTGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTTCAGAAAGATGGTCTaGAGCTTCCCACAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTFRKMV*SFPQFL
Trigger: CAGGAACTGTGGGAAGCTGCAGACCATCTTTCTGAA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAGGTCATTTCCAGCTTaGCCGCCAACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTRSFPA*PPTSSS
Trigger: AGAAGAAGATGTTGGCGGGCAAGCTGGAAATGACCT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGAGGTCATTTCCAGCTTaGCCGCCAACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWRSFPA*PPTSSS
Trigger: AGAAGAAGATGTTGGCGGGCAAGCTGGAAATGACCT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCAGCAGCTTTCTAGGTaGGGCAGAGCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRQQLSR*GRASFS
Trigger: AGAAAAAGAAGCTCTGCCCCACCTAGAAAGCTGCTG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGACATACCCAAGTAGGTaGTGGCCACAGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWTYPSR*WPQCHC
Trigger: ACAATGACACTGTGGCCACCACCTACTTGGGTATGT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTGTGTTCCACCAGTTTaGTCTCCAGGGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRCVPPV*SPGTTE
Trigger: TTCTGTTGTCCCTGGAGACCAAACTGGTGGAACACA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCTTGACCACAATAGGTaGACAGTAGAGGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWLDHNR*TVEVLS
Trigger: AGAGAGGACCTCTACTGTCCACCTATTGTGGTCAAG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCCGGCCCAGCACCTTTaGAAATATGTCAATCCACAT +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTPAQHL*KYVNPH
Trigger: ATGTGGATTGACATATTTCCAAAGGTGCTGGGCCGG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCCGGCCCAGCACCTTTaGAAATATGTCAATCCACAT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRPAQHL*KYVNPH
Trigger: ATGTGGATTGACATATTTCCAAAGGTGCTGGGCCGG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGAAGACCACACGTGCTaGGATCTTGCTCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMEDHTC*DLALCL
Trigger: AAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGGACACAAACCATTCTaGGTGGAAGGTGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMGHKPF*VEGVIQ
Trigger: CTGGATGACACCTTCCACCCAGAATGGTTTGTGTCC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCATAATCGTAGAGTGTaGTCTTCAGGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWHNRRV*SSGPSP
Trigger: TGGAGAAGGACCTGAAGATCACACTCTACGATTATG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCATAATCGTAGAGTGTaGTCTTCAGGTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRHNRRV*SSGPSP
Trigger: TGGAGAAGGACCTGAAGATCACACTCTACGATTATG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTTCAGAAAGATGGTCTaGAGCTTCCCACAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMFRKMV*SFPQFL
Trigger: CAGGAACTGTGGGAAGCTGCAGACCATCTTTCTGAA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTCCCATAGTCAAAGATaGAGGAGATTGTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWSHSQR*RRLWVC
Trigger: ACAGACCCACAATCTCCTGCATCTTTGACTATGGGA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGAGGTCATTTCCAGCTTaGCCGCCAACATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMRSFPA*PPTSSS
Trigger: AGAAGAAGATGTTGGCGGGCAAGCTGGAAATGACCT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTTCTCCGATGACAGATaGATCATCTGTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMFSDDR*IICLLL
Trigger: CAGGAGGAGACAGATGATCCATCTGTCATCGGAGAA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCCGGCCCAGCACCTTTaGAAATATGTCAATCCACAT +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMPAQHL*KYVNPH
Trigger: ATGTGGATTGACATATTTCCAAAGGTGCTGGGCCGG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAGAAGTTCTGAGCTCTaGTCTAGAGGAATACCTTTG +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRRSSEL*SRGIPL
Trigger: CAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAGAAAAGAGTCTCATTaGAGAGTGGGCTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRRKESH*RVGYFP
Trigger: AGGGAAATAGCCCACTCTTCAATGAGACTCTTTTCT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGAGAAAAGAGTCTCATTaGAGAGTGGGCTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWRKESH*RVGYFP
Trigger: AGGGAAATAGCCCACTCTTCAATGAGACTCTTTTCT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCCTCAGCAAACTGATTaGATTCCTTCTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMPQQTD*IPSHPQ
Trigger: CTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTCAAAGCCAAAGATCTaGTTGACGTTGTCCATCACA +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTSKPKI*LTLSIT
Trigger: TGTGATGGACAACGTCAAGCAGATCTTTGGCTTTGA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTGCACATCTGTCTTCTaGTTGTGTTCTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMCTSVF*LCSSNP
Trigger: GGGATTCGAAGAACACAAGCAGAAGACAGATGTGCA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCCTTTCACTGTCTTCTaGTCAAAAAGGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTPFTVF*SKRDTN
Trigger: GTTTGTGTCCCTTTTTGAGCAGAAGACAGTGAAAGG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAGTCTCATTGAAGAGTaGGCTATTTCCCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRSLIEE*AISLLD
Trigger: ATCCAGAAGGGAAATAGCCCACTCTTCAATGAGACT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGATATTTCAGAAAGATaGTCTGCAGCTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: GSVCFILRKPRVYPEECWDISER*SAASHS
Trigger: ACTGTGGGAAGCTGCAGACCATCTTTCTGAAATATC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGATGGCTGGATCTTCTaGGAGGGGATAAATTTTGAA +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRDGWIF*EGINFE
Trigger: TTCAAAATTTATCCCCTCCCAGAAGATCCAGCCATC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGAGAAGTTCTGAGCTCTaGTCTAGAGGAATACCTTTG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMRSSEL*SRGIPL
Trigger: CAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR TCA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGTAACATCACTTCCATaGAGAGAGTACAGACATCAA +
Preference number: 4 (lower is better)
Translates to: REDENNVIPKNSMDMRKTVTSLP*REYRHQ
Trigger: TTGATGTCTGTACTCTCTTCATGGAAGTGATGTTAC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGATCCTTGAAGTTTCATaGATCTCAAAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMILEVS*ISKPGM
Trigger: CATCCCTGGCTTTGAGATGCATGAAACTTCAAGGAT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CCA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCAATCTTCTCATCCTTaGAGAGCAGGTCATAATCGT +
Preference number: 4 (lower is better)
Translates to: RGEREDENNVIPKNSMDMQSSHP*RAGHNR
Trigger: ACGATTATGACCTGCTCTCCAAGGATGAGAAGATTG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR GCA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTTCATGTTCACTTTCTaGAACAATCTCCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GEREDENNVIPKNSMDMRFMFTF*NNLQGH
Trigger: ATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS GCA 90 bp GTCATCCACCATGCCGCCCAGGGCCCCCTCGAGGGCAAACACAGCTaGAGGTCCCGTCTTCTCCAGCGGCTCCATGCGGCGGCGCCAGCG +
Preference number: 5 (lower is better)
Translates to: VIHHAAQGPLEGKHS*RSRLLQRLHAAAPA
Trigger: CGCTGGCGCCGCCGCATGGAGCCGCTGGAGAAGACGGGACCTGCAGCTGTGTTTGCCCTCGAGGGGGCCCTGGGCGGCATGGTGGATGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GAACGCTGCCAGCAGCTCGCCGGCAGGCTGGCTGCCCCGGGTCAGTaGGAACCAGGCCAGGCGGGGCATCCGTTCCAGGCTTGGCTGACA +
Preference number: 5 (lower is better)
Translates to: ERCQQLAGRLAAPGQ*EPGQAGHPFQAWLT
Trigger: TGTCAGCCAAGCCTGGAACGGATGCCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGCCAGCCTGCCGGCGAGCTGCTGGCAGCGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp TCTCTCTGGATAAGCTCGAACGCTGCCAGCAGCTCGCCGGCAGGCTaGCTGCCCCGGGTCAGTGGGAACCAGGCCAGGCGGGGCATCCGT +
Preference number: 5 (lower is better)
Translates to: SLWISSNAASSSPAG*LPRVSGNQARRGIR
Trigger: ACGGATGCCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGCCAGCCTGCCGGCGAGCTGCTGGCAGCGTTCGAGCTTATCCAGAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 90 bp CCTCGGCCTCTGCCTGCCTGTGCCTCTTCAGTGCTTCCATCTGGCTaGGGTCCCTCCTGCGCAGTCGGACCCAGCGTCGACGCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: PRPLPACASSVLPSG*GPSCAVGPSVDACE
Trigger: CTCACAGGCGTCGACGCTGGGTCCGACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCACTGAAGAGGCACAGGCAGGCAGAGGCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GGCTTCCTGGGTGTGGTCGGTCCCCCTGGGCCCACAGCAGCACTCTaGTCCAGGAACGGCTCAGCTTCATCTCCAGTCAGGCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GFLGVVGPPGPTAAL*SRNGSASSPVRPWS
Trigger: GGACCAGGGCCTGACTGGAGATGAAGCTGAGCCGTTCCTGGACCAGAGTGCTGCTGTGGGCCCAGGGGGACCGACCACACCCAGGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GGGAGGAGGGTGGGAAGGTGGCTTCCTGGGTGTGGTCGGTCCCCCTaGGCCCACAGCAGCACTCTGGTCCAGGAACGGCTCAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: GRRVGRWLPGCGRSP*AHSSTLVQERLSFI
Trigger: GATGAAGCTGAGCCGTTCCTGGACCAGAGTGCTGCTGTGGGCCCAGGGGGACCGACCACACCCAGGAAGCCACCTTCCCACCCTCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 90 bp GAGAGGCCCCCGTGGGTTGCTGCTTGGCGTCTAGCAGAGGTGCGTTaGAGCTGGCAGAGAGGCTGGGGGTGGCAAGGACCTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: ERPPWVAAWRLAEVR*SWQRGWGWQGPPGV
Trigger: CACTCCAGGAGGTCCTTGCCACCCCCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAGACGCCAAGCAGCAACCCACGGGGGCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GCACTCTGGTCCAGGAACGGCTCAGCTTCATCTCCAGTCAGGCCCTaGTCCTCGGTGTCTTCCTCCCCTCCTGTGTCCGTGGGGACCGGC +
Preference number: 5 (lower is better)
Translates to: ALWSRNGSASSPVRP*SSVSSSPPVSVGTG
Trigger: GCCGGTCCCCACGGACACAGGAGGGGAGGAAGACACCGAGGACCAGGGCCTGACTGGAGATGAAGCTGAGCCGTTCCTGGACCAGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000113823.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204591.3
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACGGTACACGGGGGCCTaGATCCTGTGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEARYTGA*ILCCWQ
Trigger: CTGCCAGCAGCACAGGATCAAGGCCCCCGTGTACCG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGGTTCATCCCGACCTaGGCCAGCAGGCCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGFIPT*ASRPLF
Trigger: GAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGCCCAGGTGTGGGTTaGGGAGTCTGCCAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGPGVG*GVCQPL
Trigger: TAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGCCCAGGTGTGGGTTaGGGAGTCTGCCAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAGPGVG*GVCQPL
Trigger: TAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATGGATCCGAGTTCGCTaGGTCTGCCCAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAWIRVR*VCPAAV
Trigger: CACAGCTGCTGGGCAGACCAAGCGAACTCGGATCCA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTGGATCCGAGTTCGCTaGGTCTGCCCAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEWIRVR*VCPAAV
Trigger: CACAGCTGCTGGGCAGACCAAGCGAACTCGGATCCA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACAGCGAGCCCCAAACTaGGACAGCAGCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAQRAPN*DSSLFS
Trigger: GGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCGGTACACGGGGGCCTaGATCCTGTGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVRYTGA*ILCCWQ
Trigger: CTGCCAGCAGCACAGGATCAAGGCCCCCGTGTACCG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCACTTCTCAGCCGTCTaGGCTGGCTTGGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEHFSAV*AGLGIR
Trigger: CCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACACTTCTCAGCCGTCTaGGCTGGCTTGGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAHFSAV*AGLGIR
Trigger: CCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGGTTCATCCCGACCTaGGCCAGCAGGCCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVGFIPT*ASRPLF
Trigger: GAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp CCGGCCACTTCTTCCCAGAGTATCTCGTGTCCATGGTGCTGTCACTaGGCAGGGACCAAGTCTCAGCCCGGCTCTGTCCCCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: PATSSQSISCPWCCH*AGTKSQPGSVPHQA
Trigger: TGCCTGGTGGGGGACAGAGCCGGGCTGAGACTTGGTCCCTGCTCAGTGACAGCACCATGGACACGAGATACTCTGGGAAGAAGTGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000113823.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204591.3
CDS CCA 90 bp AGGGCGTCCACATCCTCGGAGGAACACTGTGCCTTCAGAGCCAAGTaGACCTGCTCCAGGTTAGCTTCCAGGCGGTCAGCGACCCTGAGG +
Preference number: 5 (lower is better)
Translates to: RASTSSEEHCAFRAK*TCSRLASRRSATLR
Trigger: CCTCAGGGTCGCTGACCGCCTGGAAGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAGGATGTGGACGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GCACTCTGGTCCAGGAACGGCTCAGCTTCATCTCCAGTCAGGCCCTaGTCCTCGGTGTCTTCCTCCCCTCCTGTGTCAGGCACCAGATCC +
Preference number: 5 (lower is better)
Translates to: ALWSRNGSASSPVRP*SSVSSSPPVSGTRS
Trigger: GGATCTGGTGCCTGACACAGGAGGGGAGGAAGACACCGAGGACCAGGGCCTGACTGGAGATGAAGCTGAGCCGTTCCTGGACCAGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000204354.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCCTGGAGTGGGATCTaGGCTTCCCCCAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSWSGI*ASPRNL
Trigger: CAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCACGGAAGGCATCTGTCTaGCGGTACTCCAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEARKASV*RYSRWN
Trigger: GTTCCACCTGGAGTACCGCAAGACAGATGCCTTCCG...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCGGAAGGCATCTGTCTaGCGGTACTCCAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQERKASV*RYSRWN
Trigger: GTTCCACCTGGAGTACCGCAAGACAGATGCCTTCCG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGCGAGCCCCAAACTaGGACAGCAGCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGQRAPN*DSSLFS
Trigger: GGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTCCGTGGGGTGATGTaGAAGGGAGGTCCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSFRGVM*KGGPGR
Trigger: CCGGCCTGGACCTCCCTTCAACATCACCCCACGGAA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGGCTTGGGCATTCGGTaGAGATCCAGCTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEGLGIR*RSSCRE
Trigger: CTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGCCGTCTTGGCTGGCTaGGGCATTCGGTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGAVLAG*GIRLRS
Trigger: GGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGGTTCATCCCGACCTaGGCCAGCAGGCCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLGFIPT*ASRPLF
Trigger: GAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS CCA 90 bp TCCATCTGTGGTAAGTCCTCAGCCCGGAAGAGCTTCAGGCAGAAGTaGGCTCCTCGAAGGGCCACACCGGTGGGCCTAAGCAGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SICGKSSARKSFRQK*APRRATPVGLSRLP
Trigger: AGGCAACCTGCTTAGGCCCACCGGTGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCTCTTCCGGGCTGAGGACTTACCACAGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GGGCACGGAGATGCAGAAGCCAGTCCTCGGCCTGCTCCAGGGCAGTaGAGAGCTCACTATGGCCAAGCTTCAAGGCCAGAGCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GHGDAEASPRPAPGQ*RAHYGQASRPEQLL
Trigger: AAGAAGCTGCTCTGGCCTTGAAGCTTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGGCCGAGGACTGGCTTCTGCATCTCCGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp CCGGGTCAGTGGGAACCAGGCCAGGCGGGGCATCCGTTCCAGGCTTaGCTGACAAATACAGCGACCCATGAACTCGTCAGCACCATAGGT +
Preference number: 5 (lower is better)
Translates to: PGQWEPGQAGHPFQA*LTNTATHELVSTIG
Trigger: ACCTATGGTGCTGACGAGTTCATGGGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGCCCCGCCTGGCCTGGTTCCCACTGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCCTGGAGTGGGATCTaGGCTTCCCCCAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSWSGI*ASPRNL
Trigger: CAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGGA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCGGAAGGCATCTGTCTaGCGGTACTCCAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGRKASV*RYSRWN
Trigger: GTTCCACCTGGAGTACCGCAAGACAGATGCCTTCCG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGTCAGAGAAGGAGTCCTaGTCCATGGCTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQESEKES*SMAGRS
Trigger: AGACCTGCCAGCCATGGACAAGGACTCCTTCTCTGA...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGCATCCGTTCCAGGCTaGGCTGACAAATACAGCGAC +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAASVPG*ADKYSD
Trigger: GTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGATGTTGGCCTCCCTTaGAGGTGGTGGGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEDVGLP*RWWVRQ
Trigger: TTGCCTTACCCACCACCTCAAAGGGAGGCCAACATC...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCAGCGAGCCCCAAACTaGGACAGCAGCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVQRAPN*DSSLFS
Trigger: GGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGCCCAGGTGTGGGTTaGGGAGTCTGCCAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLGPGVG*GVCQPL
Trigger: TAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAAGGAACCAAGCCTTGTaGCTGAAGGACATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEARNQAL*LKDMQG
Trigger: GCCCTGCATGTCCTTCAGCAACAAGGCTTGGTTCCT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGAGGAACCAAGCCTTGTaGCTGAAGGACATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQERNQAL*LKDMQG
Trigger: GCCCTGCATGTCCTTCAGCAACAAGGCTTGGTTCCT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGAACACGAACCTCCAGTaGAAATTGCCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQENTNLQ*KLPSPP
Trigger: GGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGTT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGGCAACAGCACAGACTaGCTCAGCAGGCAGATAGTC +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAGNSTD*LSRQIV
Trigger: GACTATCTGCCTGCTGAGCAAGTCTGTGCTGTTGCC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS GCA 90 bp TGTCAACTGAGCCACCAGGGCGTCCACATCCTCGGAGGAACACTGTaGCTTCAGAGCCAAGTGGACCTGCTCCAGGTTAGCTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: CQLSHQGVHILGGTL*LQSQVDLLQVSFQA
Trigger: CGCCTGGAAGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAGGATGTGGACGCCCTGGTGGCTCAGTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 90 bp ACTCGTCAGCACCATAGGTGTCGTGGTCATAGAGCTCCACCACGATaGAGGGCGGATGCTCGGCGATACTGGCTGGCTCGCCGAAGATCT +
Preference number: 5 (lower is better)
Translates to: TRQHHRCRGHRAPPR*RADARRYWLARRRS
Trigger: AGATCTTCGGCGAGCCAGCCAGTATCGCCGAGCATCCGCCCTGCATCGTGGTGGAGCTCTATGACCACGACACCTATGGTGCTGACGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GGAAGGAGACGATGGCGTAGGGATCAGAGAAGGAGTCCTTGTCCATaGCTGGCAGGTCTCGGGCCTGGTACAGGTAGCAGCGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: GRRRWRRDQRRSPCP*LAGLGPGTGSSADG
Trigger: ACCATCTGCGCTGCTACCTGTACCAGGCCCGAGACCTGCCAGCCATGGACAAGGACTCCTTCTCTGATCCCTACGCCATCGTCTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGGAGGTTGCTGGCCCTaGCCAGCAAGCAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASGGCWP*PASNRA
Trigger: TGCTCTGTTGCTTGCTGGCAAGGGCCAGCAACCTCC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGGAGGTTGCTGGCCCTaGCCAGCAAGCAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSGGCWP*PASNRA
Trigger: TGCTCTGTTGCTTGCTGGCAAGGGCCAGCAACCTCC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTCCTGGAGTGGGATCTaGGCTTCCCCCAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEESWSGI*ASPRNL
Trigger: CAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGGA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCCTGGAGTGGGATCTaGGCTTCCCCCAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSWSGI*ASPRNL
Trigger: CAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCTAGCAGAGGTGCGTaGAAGCTGGCAGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSSSRGA*KLAERL
Trigger: CAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAGA...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTGGATCCGAGTTCGCTaGGTCTGCCCAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASWIRVR*VCPAAV
Trigger: CACAGCTGCTGGGCAGACCAAGCGAACTCGGATCCA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCCACATCCTGCAGCATaGTGGCTGAGTAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGPHPAA*WLSRRQ
Trigger: CTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGCTGTACTCCCAGCCTaGTTCATCAACAGCCCGATT +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAAVLPA*FINSPI
Trigger: AATCGGGCTGTTGATGAACAAGGCTGGGAGTACAGC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCGGAAGGCATCTGTCTaGCGGTACTCCAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSRKASV*RYSRWN
Trigger: GTTCCACCTGGAGTACCGCAAGACAGATGCCTTCCG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGAGCCCCAAACTaGGACAGCAGCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEQRAPN*DSSLFS
Trigger: GGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGGCAACAGCACAGACTaGCTCAGCAGGCAGATAGTC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGGNSTD*LSRQIV
Trigger: GACTATCTGCCTGCTGAGCAAGTCTGTGCTGTTGCC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCAGAAGGCATCCTTCTaGGCAACAGCACAGACTTGC +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEQKASF*ATAQTC
Trigger: GCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCTG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGGCTTGGGCATTCGGTaGAGATCCAGCTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSGLGIR*RSSCRE
Trigger: CTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGCTTGGGCATTCGGTaGAGATCCAGCTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVGLGIR*RSSCRE
Trigger: CTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGCCGTCTTGGCTGGCTaGGGCATTCGGTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPAVLAG*GIRLRS
Trigger: GGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCCGTCTTGGCTGGCTaGGGCATTCGGTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAAVLAG*GIRLRS
Trigger: GGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGCCGTCTTGGCTGGCTaGGGCATTCGGTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEAVLAG*GIRLRS
Trigger: GGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACACTTCTCAGCCGTCTaGGCTGGCTTGGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLHFSAV*AGLGIR
Trigger: CCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCACTTCTCAGCCGTCTaGGCTGGCTTGGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASHFSAV*AGLGIR
Trigger: CCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGGGGAGGAAGCCCAGGTaGTCGTCCAGGTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWGRKPR*SSRSVA
Trigger: AGCCACTGACCTGGACGACAACCTGGGCTTCCTCCC...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp GGGAGCCGGGTCTGGTTCTCGAACACCTCCTCCACGAAGCTCAGATaGCCAGCGTCAGCATCATGGAGTAGGGTCTTCTCTGGACACACG +
Preference number: 5 (lower is better)
Translates to: GSRVWFSNTSSTKLR*PASASWSRVFSGHT
Trigger: CGTGTGTCCAGAGAAGACCCTACTCCATGATGCTGACGCTGGTCATCTGAGCTTCGTGGAGGAGGTGTTCGAGAACCAGACCCGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp AGAAGCCAGTCCTCGGCCTGCTCCAGGGCAGTGGAGAGCTCACTATaGCCAAGCTTCAAGGCCAGAGCAGCTTCTTTGATCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RSQSSACSRAVESSL*PSFKARAASLIWLR
Trigger: CCTGAGCCAGATCAAAGAAGCTGCTCTGGCCTTGAAGCTTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGGCCGAGGACTGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTTTCACATTGGGGAGGTaGCTGGCCCTTGCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPFTLGR*LALASK
Trigger: CTTGCTGGCAAGGGCCAGCAACCTCCCCAATGTGAA...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTTCACATTGGGGAGGTaGCTGGCCCTTGCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEFTLGR*LALASK
Trigger: CTTGCTGGCAAGGGCCAGCAACCTCCCCAATGTGAA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCGGTCCTTCTTCACATaGGGGAGGTTGCTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAARSFFT*GRLLAL
Trigger: AAGGGCCAGCAACCTCCCCAATGTGAAGAAGGACCG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCGGTCCTTCTTCACATaGGGGAGGTTGCTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPRSFFT*GRLLAL
Trigger: AAGGGCCAGCAACCTCCCCAATGTGAAGAAGGACCG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCATCTAGAGGAATACCTTaGAGGTCCCACTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEASRGIP*RSHSKP
Trigger: GGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGA...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAATCGTCTCATGGTCCTaGACCACCACGAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAIVSWS*TTTRSS
Trigger: AGAACTTCTCGTGGTGGTCAAGGACCATGAGACGAT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCTAGCAGAGGTGCGTaGAAGCTGGCAGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLSSRGA*KLAERL
Trigger: CAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAGA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATCTAGCAGAGGTGCGTaGAAGCTGGCAGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGSSRGA*KLAERL
Trigger: CAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAGA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTCTAGCAGAGGTGCGTaGAAGCTGGCAGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAASSRGA*KLAERL
Trigger: CAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAGA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAGTCTTCTCCAGGATCTaGCTGCAGAGCATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAVFSRI*LQSIFP
Trigger: TGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGAC...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCTGTGTTCCACCAGTTaGGTCTCCAGGGACAACAGA +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGLCSTS*VSRDNR
Trigger: TCTGTTGTCCCTGGAGACCAAACTGGTGGAACACAG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGCTGTACTCCCAGCCTaGTTCATCAACAGCCCGATT +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGAVLPA*FINSPI
Trigger: AATCGGGCTGTTGATGAACAAGGCTGGGAGTACAGC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGAAGGCATCTGTCTaGCGGTACTCCAGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASRKASV*RYSRWN
Trigger: GTTCCACCTGGAGTACCGCAAGACAGATGCCTTCCG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGCACTGTCTTCTGGCTTaGATGCAGGAAGGAGACGAT +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEHCLLA*MQEGDD
Trigger: ATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTG...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCAGCTGATGGAATaGTCTCGGGGGCATGGGGAT +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSSQLME*SRGHGD
Trigger: ATCCCCATGCCCCCGAGACAATTCCATCAGCTGGCT...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGCCAGCTGATGGAATaGTCTCGGGGGCATGGGGAT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAASQLME*SRGHGD
Trigger: ATCCCCATGCCCCCGAGACAATTCCATCAGCTGGCT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGTCACACTTGCCATaGGGGTCCTTGGGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGGSHLP*GSLGCK
Trigger: CTTACAGCCCAAGGACCCCAATGGCAAGTGTGACCC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGTCACACTTGCCATaGGGGTCCTTGGGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPGSHLP*GSLGCK
Trigger: CTTACAGCCCAAGGACCCCAATGGCAAGTGTGACCC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGGGTCACACTTGCCATaGGGGTCCTTGGGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSGSHLP*GSLGCK
Trigger: CTTACAGCCCAAGGACCCCAATGGCAAGTGTGACCC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGGTCACACTTGCCATaGGGGTCCTTGGGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEGSHLP*GSLGCK
Trigger: CTTACAGCCCAAGGACCCCAATGGCAAGTGTGACCC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGGGTCACACTTGCCATaGGGGTCCTTGGGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASGSHLP*GSLGCK
Trigger: CTTACAGCCCAAGGACCCCAATGGCAAGTGTGACCC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAACACGAACCTCCAGTaGAAATTGCCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVNTNLQ*KLPSPP
Trigger: GGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGTT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGCAACAGCACAGACTaGCTCAGCAGGCAGATAGTC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVGNSTD*LSRQIV
Trigger: GACTATCTGCCTGCTGAGCAAGTCTGTGCTGTTGCC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGAAGGCATCCTTCTaGGCAACAGCACAGACTTGC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGQKASF*ATAQTC
Trigger: GCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCTG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGCTTGGGCATTCGGTaGAGATCCAGCTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPGLGIR*RSSCRE
Trigger: CTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGGCTTGGGCATTCGGTaGAGATCCAGCTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSGLGIR*RSSCRE
Trigger: CTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp GGCGGGGCATCCGTTCCAGGCTTGGCTGACAAATACAGCGACCCATaGACTCGTCAGCACCATAGGTGTCGTGGTCATAGAGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: GGASVPGLADKYSDP*TRQHHRCRGHRAPP
Trigger: TGGTGGAGCTCTATGACCACGACACCTATGGTGCTGACGAGTTCATGGGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGCCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GGTGTCATCCAGCTGGTCCAAGGAGCACTTCTCAGCCGTCTTGGCTaGCTTGGGCATTCGGTTGAGATCCAGCTGCAGAGAGCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: GVIQLVQGALLSRLG*LGHSVEIQLQRAQK
Trigger: TTTCTGGGCTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTGCTCCTTGGACCAGCTGGATGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCTCTAGAGGAATACCTTaGAGGTCCCACTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGSRGIP*RSHSKP
Trigger: GGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGA...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGGCAAAGCCAAAGATCTGCTaGACGTTGTCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: RPPGPRAMEEQLVLGQEAKPKIC*TLSITA
Trigger: TGCTGTGATGGACAACGTCAAGCAGATCTTTGGCTT...TGCCTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCCACATCCTGCAGCATaGTGGCTGAGTAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPPHPAA*WLSRRQ
Trigger: CTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCACATCCTGCAGCATaGTGGCTGAGTAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEPHPAA*WLSRRQ
Trigger: CTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCCACATCCTGCAGCATaGTGGCTGAGTAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAPHPAA*WLSRRQ
Trigger: CTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCAGAGAAGGAGTCCTaGTCCATGGCTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLSEKES*SMAGRS
Trigger: AGACCTGCCAGCCATGGACAAGGACTCCTTCTCTGA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTCAGAGAAGGAGTCCTaGTCCATGGCTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASSEKES*SMAGRS
Trigger: AGACCTGCCAGCCATGGACAAGGACTCCTTCTCTGA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTCAGAGAAGGAGTCCTaGTCCATGGCTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAASEKES*SMAGRS
Trigger: AGACCTGCCAGCCATGGACAAGGACTCCTTCTCTGA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGATAGAAGATGAGGGTTaGATCCCAGGTGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEIEDEG*IPGGIQ
Trigger: CTGAATCCCACCTGGGATCAAACCCTCATCTTCTAT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTGCATCCGTTCCAGGCTaGGCTGACAAATACAGCGAC +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASASVPG*ADKYSD
Trigger: GTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGC...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCATCCGTTCCAGGCTaGGCTGACAAATACAGCGAC +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAASVPG*ADKYSD
Trigger: GTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGCATCCGTTCCAGGCTaGGCTGACAAATACAGCGAC +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLASVPG*ADKYSD
Trigger: GTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGATGTTGGCCTCCCTTaGAGGTGGTGGGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEDVGLP*RWWVRQ
Trigger: TTGCCTTACCCACCACCTCAAAGGGAGGCCAACATC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGATGTTGGCCTCCCTTaGAGGTGGTGGGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGDVGLP*RWWVRQ
Trigger: TTGCCTTACCCACCACCTCAAAGGGAGGCCAACATC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCGATGTTGGCCTCCCTTaGAGGTGGTGGGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSDVGLP*RWWVRQ
Trigger: TTGCCTTACCCACCACCTCAAAGGGAGGCCAACATC...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGCCAGCTGATGGAATaGTCTCGGGGGCATGGGGAT +
Preference number: 5 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWSQLME*SRGHGD
Trigger: ATCCCCATGCCCCCGAGACAATTCCATCAGCTGGCT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTAGGAACCAAGCCTTGTaGCTGAAGGACATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPRNQAL*LKDMQG
Trigger: GCCCTGCATGTCCTTCAGCAACAAGGCTTGGTTCCT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAAGGAACCAAGCCTTGTaGCTGAAGGACATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLRNQAL*LKDMQG
Trigger: GCCCTGCATGTCCTTCAGCAACAAGGCTTGGTTCCT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCAGAAGGCATCCTTCTaGGCAACAGCACAGACTTGC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVQKASF*ATAQTC
Trigger: GCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCTG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp GCAGCTGTGACCTTGACCACAGGCTTAATATTCACCCCAGGCAGCTaGCGCCCCTCTATCACCTGGACTCTGATCTGGAAGTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: AAVTLTTGLIFTPGS*RPSITWTLIWKSCG
Trigger: GCCACAGGACTTCCAGATCAGAGTCCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAATATTAAGCCTGTGGTCAAGGTCACAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 90 bp TGGAGAGCTCACTATGGCCAAGCTTCAAGGCCAGAGCAGCTTCTTTaGTCTGGCTCAGGTGACGGGTGCGTAGCCGGAGCAGGTACTGAT +
Preference number: 5 (lower is better)
Translates to: WRAHYGQASRPEQLL*SGSGDGCVAGAGTD
Trigger: ATCAGTACCTGCTCCGGCTACGCACCCGTCACCTGAGCCAGATCAAAGAAGCTGCTCTGGCCTTGAAGCTTGGCCATAGTGAGCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 90 bp GAGTATGGGTCGCACAGGAAGTTCTCCAGGGAGCGAATGGTACACTaGCCCACAACTGGCCGGCGGCCAAACTGGCGATTATCAATGACC +
Preference number: 5 (lower is better)
Translates to: EYGSHRKFSRERMVH*PTTGRRPNWRLSMT
Trigger: GGTCATTGATAATCGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGAACTTCCTGTGCGACCCATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp CCGCAGGCCCCAGGCCAGGATCTCAATGGCAGTACGTTGGAGAGCTaGCTTAATGTTCTGGGGAACCATGTAGATGTTGGCCTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: PQAPGQDLNGSTLES*LNVLGNHVDVGLPL
Trigger: CAAAGGGAGGCCAACATCTACATGGTTCCCCAGAACATTAAGCCAGCTCTCCAACGTACTGCCATTGAGATCCTGGCCTGGGGCCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp TCTCTGCTGAGTATGGGTCGCACAGGAAGTTCTCCAGGGAGCGAATaGTACACTGACCCACAACTGGCCGGCGGCCAAACTGGCGATTAT +
Preference number: 5 (lower is better)
Translates to: SLLSMGRTGSSPGSE*YTDPQLAGGQTGDY
Trigger: ATAATCGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGAACTTCCTGTGCGACCCATACTCAGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GAGCTGATCTCTCCACTGATTTGGTCCAGAGACACAGTAGGTCTGTaGGAGCCCACAGCGAGCCCCAAACTTGGACAGCAGCCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: ELISPLIWSRDTVGL*EPTASPKLGQQPVL
Trigger: GAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTGTGGGCTCCCACAGACCTACTGTGTCTCTGGACCAAATCAGTGGAGAGATCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp CAAATCTGTGTCCTCCGTCTCAAAGCCAGGGATGTGATGGATGGCTaGCTTCTCTCTCTGGATAAGCTCGAACGCTGCCAGCAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: QICVLRLKARDVMDG*LLSLDKLERCQQLA
Trigger: GGCGAGCTGCTGGCAGCGTTCGAGCTTATCCAGAGAGAGAAGCCAGCCATCCATCACATCCCTGGCTTTGAGACGGAGGACACAGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203803.3
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTCTAGAGGAATACCTTaGAGGTCCCACTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVSRGIP*RSHSKP
Trigger: GGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGA...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCCAGCAGCTGTGACCTaGACCACAGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSPAAVT*TTGLIF
Trigger: GAATATTAAGCCTGTGGTCAAGGTCACAGCTGCTGG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGTCTTCTCCAGGATCTaGCTGCAGAGCATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVVFSRI*LQSIFP
Trigger: TGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGAC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGTCTTCTCCAGGATCTaGCTGCAGAGCATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSVFSRI*LQSIFP
Trigger: TGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGAC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGAGGAAGCCCAGGTaGTCGTCCACTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGGRKPR*SSTSIS
Trigger: AGAAATAGAAGTGGACGACAACCTGGGCTTCCTCCC...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081904.7
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACTGTGTTCCACCAGTTaGGTCTCCAGGGACAACAGA +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLLCSTS*VSRDNR
Trigger: TCTGTTGTCCCTGGAGACCAAACTGGTGGAACACAG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTGTGTTCCACCAGTTaGGTCTCCAGGGACAACAGA +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSLCSTS*VSRDNR
Trigger: TCTGTTGTCCCTGGAGACCAAACTGGTGGAACACAG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTCTGTGTTCCACCAGTTaGGTCTCCAGGGACAACAGA +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPLCSTS*VSRDNR
Trigger: TCTGTTGTCCCTGGAGACCAAACTGGTGGAACACAG...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCCACATCCTGCAGCATaGTGGCTGAGTAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWPHPAA*WLSRRQ
Trigger: CTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGCTGTACTCCCAGCCTaGTTCATCAACAGCCCGATT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAAVLPA*FINSPI
Trigger: AATCGGGCTGTTGATGAACAAGGCTGGGAGTACAGC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCACTGTCTTCTGGCTTaGATGCAGGAAGGAGACGAT +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVHCLLA*MQEGDD
Trigger: ATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTTTGCCATTGGGGTCCTaGGGCTGTAAGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASLPLGS*GCKPNA
Trigger: AGCATTTGGCTTACAGCCCAAGGACCCCAATGGCAA...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTTGCCATTGGGGTCCTaGGGCTGTAAGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAALPLGS*GCKPNA
Trigger: AGCATTTGGCTTACAGCCCAAGGACCCCAATGGCAA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTTGCCATTGGGGTCCTaGGGCTGTAAGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSLPLGS*GCKPNA
Trigger: AGCATTTGGCTTACAGCCCAAGGACCCCAATGGCAA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATTGCCATTGGGGTCCTaGGGCTGTAAGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLLPLGS*GCKPNA
Trigger: AGCATTTGGCTTACAGCCCAAGGACCCCAATGGCAA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGAAGGCATCCTTCTaGGCAACAGCACAGACTTGC +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEQKASF*ATAQTC
Trigger: GCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCTG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAGAAGGCATCCTTCTaGGCAACAGCACAGACTTGC +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASQKASF*ATAQTC
Trigger: GCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCTG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTACACGTGCTGGGATCTaGCTCTCTGTCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASTRAGI*LSVLSS
Trigger: ACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGT...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp ATGAGGACTGGATGGAGAAGGCGTCAGGTTAGTGGGGCCCAAGCTTaGCAGCCCATCTGTAAGCTGGACAGGAATGAGAGGCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: MRTGWRRRQVSGAQA*QPICKLDRNERLLV
Trigger: GACAAGGAGCCTCTCATTCCTGTCCAGCTTACAGATGGGCTGTCAAGCTTGGGCCCCACTAACCTGACGCCTTCTCCATCCAGTCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153860.4
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 90 bp AAACTTGGGGTAGGTGAGGCCCGTTGTGCCCCAGTTCCCGACCAGTaGCAGCTTTGTCTGGTTCTCATACGTTTCGGCAAAGACAGAGAG +
Preference number: 5 (lower is better)
Translates to: KLGVGEARCAPVPDQ*QLCLVLIRFGKDRE
Trigger: CTCTCTGTCTTTGCCGAAACGTATGAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGGGGCACAACGGGCCTCACCTACCCCAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp ACTCTCGGGGACTGCCATAGAGGTTCACATAGCAGGGCCCAAAAGTaGGGAGGAAGCCCAGGTTGTCGTCCACTTCTATTTCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: TLGDCHRGSHSRAQK*GGSPGCRPLLFLLQ
Trigger: CTGGAGGAGAAATAGAAGTGGACGACAACCTGGGCTTCCTCCCCACTTTTGGGCCCTGCTATGTGAACCTCTATGGCAGTCCCCGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000113818.8
ENSMUST00000113823.8
ENSMUST00000204354.3
ENSMUST00000204591.3
CDS CCA 90 bp AAGAAGTATCGGGGCGCCTTGGATCCTCTAGCTTCGGATTCATGTTaGGTTCATCCCGACCTTGGCCAGCAGGCCGCTCTTCATGTTCAC +
Preference number: 5 (lower is better)
Translates to: KKYRGALDPLASDSC*VHPDLGQQAALHVH
Trigger: GTGAACATGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCCAACATGAATCCGAAGCTAGAGGATCCAAGGCGCCCCGATACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGGGTTCACACTGTTCTaGATGACTTTGGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGGFTLF*MTLVLF
Trigger: GAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCTAGAGGAATACCTTaGAGGTCCCACTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLSRGIP*RSHSKP
Trigger: GGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTATCGTCTCATGGTCCTaGACCACCACGAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASIVSWS*TTTRSS
Trigger: AGAACTTCTCGTGGTGGTCAAGGACCATGAGACGAT...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCGTCTCATGGTCCTaGACCACCACGAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAIVSWS*TTTRSS
Trigger: AGAACTTCTCGTGGTGGTCAAGGACCATGAGACGAT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCAGGAGAAGAAAAGAGTCTCATaGAAGAGTGGGCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: ARPPGPRAMEEQLVLGQEKKRVS*KSGLFP
Trigger: GGGAAATAGCCCACTCTTCAATGAGACTCTTTTCTT...CTCCTGGCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCCTTCAATGTCCTCTTaGTCTTCAGAAGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSPSMSS*SSEGSF
Trigger: GAAGGACCCTTCTGAAGACAAAGAGGACATTGAAGG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCAAGCCAAAGATCTGCTaGACGTTGTCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSKPKIC*TLSITA
Trigger: TGCTGTGATGGACAACGTCAAGCAGATCTTTGGCTT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTGTCTTCTCCAGGATCTaGCTGCAGAGCATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAVFSRI*LQSIFP
Trigger: TGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGAC...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTCATCAACAGCCCGATaGAGGTCTGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAASSTAR*RSVDHS
Trigger: AGAATGGTCCACAGACCTCAATCGGGCTGTTGATGA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATCATCAACAGCCCGATaGAGGTCTGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLSSTAR*RSVDHS
Trigger: AGAATGGTCCACAGACCTCAATCGGGCTGTTGATGA...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCTCATCAACAGCCCGATaGAGGTCTGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSSSTAR*RSVDHS
Trigger: AGAATGGTCCACAGACCTCAATCGGGCTGTTGATGA...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTCACTGTCTTCTGGCTTaGATGCAGGAAGGAGACGAT +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAHCLLA*MQEGDD
Trigger: ATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTG...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGACACGTGCTGGGATCTaGCTCTCTGTCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWTRAGI*LSVLSS
Trigger: ACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS GCA 90 bp TCCTTCTCATCCACAGAGAGCCCGAACCAGAGCTTGATCCGAATCTaGACGGGCATTCGGGCCCCAGGCATACCTTCCATAGGATATTTC +
Preference number: 5 (lower is better)
Translates to: SFSSTESPNQSLIRI*TGIRAPGIPSIGYF
Trigger: GAAATATCCTATGGAAGGTATGCCTGGGGCCCGAATGCCCGTGCAGATTCGGATCAAGCTCTGGTTCGGGCTCTCTGTGGATGAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp CAGCAGGAAGGTCTTCCACCTTCTGCTCACTGTGTTCCACCAGTTTaGTCTCCAGGGACAACAGAACCCTGCCTCGATAAGCCACACCTT +
Preference number: 5 (lower is better)
Translates to: QQEGLPPSAHCVPPV*SPGTTEPCLDKPHL
Trigger: AAGGTGTGGCTTATCGAGGCAGGGTTCTGTTGTCCCTGGAGACCAAACTGGTGGAACACAGTGAGCAGAAGGTGGAAGACCTTCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp TCCAGGTTAGCTTCCAGGCGGTCAGCGACCCTGAGGAGCTGGTTTTaGATCTCAATTCGATGGCTGATGTCTTCCCAGTATGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: SRLASRRSATLRSWF*ISIRWLMSSQYEDS
Trigger: GCTGTCCTCATACTGGGAAGACATCAGCCATCGAATTGAGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCCTGGAAGCTAACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp ACCTGCTCCAGGTTAGCTTCCAGGCGGTCAGCGACCCTGAGGAGCTaGTTTTGGATCTCAATTCGATGGCTGATGTCTTCCCAGTATGAG +
Preference number: 5 (lower is better)
Translates to: TCSRLASRRSATLRS*FWISIRWLMSSQYE
Trigger: CTCATACTGGGAAGACATCAGCCATCGAATTGAGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCCTGGAAGCTAACCTGGAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp TCTTCTCCACCACTGTCTTCTGGCTTTGATGCAGGAAGGAGACGATaGCGTAGGGATCAGAGAAGGAGTCCTTGTCCATGGCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SSPPLSSGFDAGRRR*RRDQRRSPCPWLAG
Trigger: ACCTGCCAGCCATGGACAAGGACTCCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTGGTGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp ATAGAGCTCCACCACGATGCAGGGCGGATGCTCGGCGATACTGGCTaGCTCGCCGAAGATCTCAATCTCATAGAAGATGAGGGTTTGATC +
Preference number: 5 (lower is better)
Translates to: IELHHDAGRMLGDTG*LAEDLNLIEDEGLI
Trigger: GATCAAACCCTCATCTTCTATGAGATTGAGATCTTCGGCGAGCCAGCCAGTATCGCCGAGCATCCGCCCTGCATCGTGGTGGAGCTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GCACAGGAAGTTCTCCAGGGAGCGAATGGTACACTGACCCACAACTaGCCGGCGGCCAAACTGGCGATTATCAATGACCTTGACCACAAT +
Preference number: 5 (lower is better)
Translates to: AQEVLQGANGTLTHN*PAAKLAIINDLDHN
Trigger: ATTGTGGTCAAGGTCATTGATAATCGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGAACTTCCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp GGCGTCAGGTTAGTGGGGCCCAAGCTTGACAGCCCATCTGTAAGCTaGACAGGAATGAGAGGCTCCTTGTCATCGATGTCAATCAGCACA +
Preference number: 5 (lower is better)
Translates to: GVRLVGPKLDSPSVS*TGMRGSLSSMSIST
Trigger: TGTGCTGATTGACATCGATGACAAGGAGCCTCTCATTCCTGTCCAGCTTACAGATGGGCTGTCAAGCTTGGGCCCCACTAACCTGACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153860.4
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCCTGTTCTTGATGACTTaGGTTCTCTTCTTTACCCCT +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGLFLMT*VLFFTP
Trigger: AGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAG...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCGGGTTCACACTGTTCTaGATGACTTTGGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVGFTLF*MTLVLF
Trigger: GAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCC...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCGGGTTCACACTGTTCTaGATGACTTTGGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSGFTLF*MTLVLF
Trigger: GAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCC...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAAGAAAAGAGTCTCATaGAAGAGTGGGCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGKKRVS*KSGLFP
Trigger: GGGAAATAGCCCACTCTTCAATGAGACTCTTTTCTT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTTCAATGTCCTCTTaGTCTTCAGAAGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEPSMSS*SSEGSF
Trigger: GAAGGACCCTTCTGAAGACAAAGAGGACATTGAAGG...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACCTTCAATGTCCTCTTaGTCTTCAGAAGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGPSMSS*SSEGSF
Trigger: GAAGGACCCTTCTGAAGACAAAGAGGACATTGAAGG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTAAGCCAAAGATCTGCTaGACGTTGTCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPKPKIC*TLSITA
Trigger: TGCTGTGATGGACAACGTCAAGCAGATCTTTGGCTT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAAAGCCAAAGATCTGCTaGACGTTGTCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLKPKIC*TLSITA
Trigger: TGCTGTGATGGACAACGTCAAGCAGATCTTTGGCTT...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGTCATCAACAGCCCGATaGAGGTCTGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWSSTAR*RSVDHS
Trigger: AGAATGGTCCACAGACCTCAATCGGGCTGTTGATGA...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTATAGAAGATGAGGGTTaGATCCCAGGTGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPIEDEG*IPGGIQ
Trigger: CTGAATCCCACCTGGGATCAAACCCTCATCTTCTAT...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTATAGAAGATGAGGGTTaGATCCCAGGTGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAIEDEG*IPGGIQ
Trigger: CTGAATCCCACCTGGGATCAAACCCTCATCTTCTAT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCGATTATCAATGACCTaGACCACAATAGGTGGACAG +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVRLSMT*TTIGGQ
Trigger: CTGTCCACCTATTGTGGTCAAGGTCATTGATAATCG...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCCGATTATCAATGACCTaGACCACAATAGGTGGACAG +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSRLSMT*TTIGGQ
Trigger: CTGTCCACCTATTGTGGTCAAGGTCATTGATAATCG...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCAAAGAGAATTTGTCATaGTCCCAGATCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGKENLS*SQIWKT
Trigger: GGTCTTCCAGATCTGGGACAATGACAAATTCTCTTT...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp CACAGCGAGCCCCAAACTTGGACAGCAGCCTGTTCTCCAGGTCTATaGCCGTCTCCCCAATCTTCTCATCCTTGGAGAGCAGGTCATAAT +
Preference number: 5 (lower is better)
Translates to: HSEPQTWTAACSPGL*PSPQSSHPWRAGHN
Trigger: ATTATGACCTGCTCTCCAAGGATGAGAAGATTGGGGAGACGGTCATAGACCTGGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 90 bp CTTCCCCTGCTCGATATCTGGCTGCAGAGGACTATAAAGAGGCCGTaGCTCCACATGCTCAGGAACCAAGCCTTGTTGCTGAAGGACATG +
Preference number: 5 (lower is better)
Translates to: LPLLDIWLQRTIKRP*LHMLRNQALLLKDM
Trigger: CATGTCCTTCAGCAACAAGGCTTGGTTCCTGAGCATGTGGAGTCACGGCCTCTTTATAGTCCTCTGCAGCCAGATATCGAGCAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 90 bp CCTGCAGCATTGTGGCTGAGTAGAAGGCAGCAAAGAGGGAATATTTaGGCCTCCGCAGGTACTTCTCCACACGCAGGATATCATCAGCAG +
Preference number: 5 (lower is better)
Translates to: PAALWLSRRQQRGNI*ASAGTSPHAGYHQQ
Trigger: CTGCTGATGATATCCTGCGTGTGGAGAAGTACCTGCGGAGGCGCAAATATTCCCTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAAGAAAAGAGTCTCATaGAAGAGTGGGCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVKKRVS*KSGLFP
Trigger: GGGAAATAGCCCACTCTTCAATGAGACTCTTTTCTT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGGCGGAGAGTCAAATACGTaGAAGAAAAGAGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: TCARPPGPRAMEEQLVLGGESNT*KKRVSL
Trigger: CAATGAGACTCTTTTCTTCAACGTATTTGACTCTCC...GCCCAGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCGGTACACGGGGGCCTaGATCCTGTGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRRYTGA*ILCCWQ
Trigger: CTGCCAGCAGCACAGGATCAAGGCCCCCGTGTACCG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCAAAGAGAATTTGTCATaGTCCCAGATCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: PWTCARPPGPRAMEEQLVKENLS*SQIWKT
Trigger: GGTCTTCCAGATCTGGGACAATGACAAATTCTCTTT...GACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCAAAGAGAATTTGTCATaGTCCCAGATCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: ELHGHAQDHQAPEQWRSSKENLS*SQIWKT
Trigger: GGTCTTCCAGATCTGGGACAATGACAAATTCTCTTT...GCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGGGTTCATCCCGACCTaGGCCAGCAGGCCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRGFIPT*ASRPLF
Trigger: GAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS GCA 90 bp TTCATCCCGACCTTGGCCAGCAGGCCGCTCTTCATGTTCACTTTCTaGAACAATCTCCAAGGTCATTTCCAGCTTGCCCGCCAACATCTT +
Preference number: 5 (lower is better)
Translates to: FIPTLASRPLFMFTF*NNLQGHFQLARQHL
Trigger: AAGATGTTGGCGGGCAAGCTGGAAATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp ACGCCTGTGAGTGTAATACATCTTCTCAACAGGGACCCAGTGTTTTaGCTTTCGGTCTGGGGGTATGGTGATGCTGTACTCCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: TPVSVIHLLNRDPVF*LSVWGYGDAVLPAL
Trigger: CAAGGCTGGGAGTACAGCATCACCATACCCCCAGACCGAAAGCCAAAACACTGGGTCCCTGTTGAGAAGATGTATTACACTCACAGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACTGTTCTTGATGACTTaGGTTCTCTTCTTTACCCCT +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLLFLMT*VLFFTP
Trigger: AGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAG...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCTGTTCTTGATGACTTaGGTTCTCTTCTTTACCCCT +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASLFLMT*VLFFTP
Trigger: AGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAG...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGACTGTTCTTGATGACTTaGGTTCTCTTCTTTACCCCT +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGLFLMT*VLFFTP
Trigger: AGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAG...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCCTGTTCTTGATGACTTaGGTTCTCTTCTTTACCCCT +
Preference number: 5 (lower is better)
Translates to: QELHGHAQDHQAPEQWRSLFLMT*VLFFTP
Trigger: AGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAG...GCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAAAGAAAAGAGTCTCATaGAAGAGTGGGCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGKKRVS*KSGLFP
Trigger: GGGAAATAGCCCACTCTTCAATGAGACTCTTTTCTT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACCAAGTTCTTCTTGTaGCTGTCAAAGCCAAAGATC +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTKFFL*LSKPKI
Trigger: GATCTTTGGCTTTGACAGCAACAAGAAGAACTTGGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp TCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTACCAAGTTCTTCTTGTaGCTGTCAAAGCCAAAGATC +
Preference number: 5 (lower is better)
Translates to: SMDMRKTTRPQSNGGAASTKFFL*LSKPKI
Trigger: GATCTTTGGCTTTGACAGCAACAAGAAGAACTTGGT...ACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACCAAGTTCTTCTTGTaGCTGTCAAAGCCAAAGATC +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAATKFFL*LSKPKI
Trigger: GATCTTTGGCTTTGACAGCAACAAGAAGAACTTGGT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGCGATTATCAATGACCTaGACCACAATAGGTGGACAG +
Preference number: 5 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWRLSMT*TTIGGQ
Trigger: CTGTCCACCTATTGTGGTCAAGGTCATTGATAATCG...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAACAGAAGCAAAGAATTaGCTCCACCAGTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGTEAKN*LHQSMN
Trigger: GTTCATTGACTGGTGGAGCAAATTCTTTGCTTCTGT...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGACAGAAGCAAAGAATTaGCTCCACCAGTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEETEAKN*LHQSMN
Trigger: GTTCATTGACTGGTGGAGCAAATTCTTTGCTTCTGT...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTACAGAAGCAAAGAATTaGCTCCACCAGTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAATEAKN*LHQSMN
Trigger: GTTCATTGACTGGTGGAGCAAATTCTTTGCTTCTGT...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGGTACACGGGGGCCTaGATCCTGTGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMRYTGA*ILCCWQ
Trigger: CTGCCAGCAGCACAGGATCAAGGCCCCCGTGTACCG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGGCCCAGGTGTGGGTTaGGGAGTCTGCCAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTGPGVG*GVCQPL
Trigger: TAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGGCCCAGGTGTGGGTTaGGGAGTCTGCCAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRGPGVG*GVCQPL
Trigger: TAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTTCCGTGGGGTGATGTaGAAGGGAGGTCCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTFRGVM*KGGPGR
Trigger: CCGGCCTGGACCTCCCTTCAACATCACCCCACGGAA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTTCCGTGGGGTGATGTaGAAGGGAGGTCCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRFRGVM*KGGPGR
Trigger: CCGGCCTGGACCTCCCTTCAACATCACCCCACGGAA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGGAGGAAGCCCAGGTaGTCGTCCAGGTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGRKPR*SSRSVA
Trigger: AGCCACTGACCTGGACGACAACCTGGGCTTCCTCCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp CCCATCGTCTCATGGTCCTTGACCACCACGAGAAGTTCTGAGCTCTaGTCTAGAGGAATACCTTTGAGGTCCCACTCAAAGCCCTCATTC +
Preference number: 5 (lower is better)
Translates to: PIVSWSLTTTRSSEL*SRGIPLRSHSKPSF
Trigger: GAATGAGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCTCGTGGTGGTCAAGGACCATGAGACGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 90 bp CTTCATGTTCACTTTCTGCAACAATCTCCAAGGTCATTTCCAGCTTaGCCGCCAACATCTTCTTCTCGCCCTCCTCTGTCACACAAGGCC +
Preference number: 5 (lower is better)
Translates to: LHVHFLQQSPRSFPA*PPTSSSRPPLSHKA
Trigger: GGCCTTGTGTGACAGAGGAGGGCGAGAAGAAGATGTTGGCGGGCAAGCTGGAAATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 90 bp CAGGTTGTCGTCCAGGTCAGTGGCTTGTGGACTCTTGAGTACACCTaGAGGCTCCTCTTCTATTTCTCCTCCAGTAGCAGAGATTTTCGA +
Preference number: 5 (lower is better)
Translates to: QVVVQVSGLWTLEYT*RLLFYFSSSSRDFR
Trigger: TCGAAAATCTCTGCTACTGGAGGAGAAATAGAAGAGGAGCCTGCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTGGACGACAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204987.3
CDS CCA 90 bp ACGTTGAAGAAAAGAGTCTCATTGAAGAGTGGGCTATTTCCCTTCTaGATCCGAGTTCGCTTGGTCTGCCCAGCAGCTGTGACCTTGACC +
Preference number: 5 (lower is better)
Translates to: TLKKRVSLKSGLFPF*IRVRLVCPAAVTLT
Trigger: GGTCAAGGTCACAGCTGCTGGGCAGACCAAGCGAACTCGGATCCAGAAGGGAAATAGCCCACTCTTCAATGAGACTCTTTTCTTCAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 90 bp CTTAATGTTCTGGGGAACCATGTAGATGTTGGCCTCCCTTTGAGGTaGTGGGTAAGGCAAATCTGTGTCCTCCGTCTCAAAGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: LNVLGNHVDVGLPLR*WVRQICVLRLKARD
Trigger: ATCCCTGGCTTTGAGACGGAGGACACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCCAACATCTACATGGTTCCCCAGAACATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203803.3
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTGGATCCGAGTTCGCTaGGTCTGCCCAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWWIRVR*VCPAAV
Trigger: CACAGCTGCTGGGCAGACCAAGCGAACTCGGATCCA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGGAGAGTCAAATACGTaGAAGAAAAGAGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: TPWTCARPPGPRAMEEQLGESNT*KKRVSL
Trigger: CAATGAGACTCTTTTCTTCAACGTATTTGACTCTCC...TAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp ATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTAGTCCTGGAGAGTCAAATACGTaGAAGAAAAGAGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: MDMRKTTRPQSNGGAASPGESNT*KKRVSL
Trigger: CAATGAGACTCTTTTCTTCAACGTATTTGACTCTCC...AGGACTAGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGGGAGAGTCAAATACGTaGAAGAAAAGAGTCTCATTG +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEGESNT*KKRVSL
Trigger: CAATGAGACTCTTTTCTTCAACGTATTTGACTCTCC...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGACCAAGTTCTTCTTGTaGCTGTCAAAGCCAAAGATC +
Preference number: 5 (lower is better)
Translates to: DSQELHGHAQDHQAPEQWTKFFL*LSKPKI
Trigger: GATCTTTGGCTTTGACAGCAACAAGAAGAACTTGGT...CCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGATTTGGTAGTTTGATCTaGCCTGTGACATCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: PKNSMDMRKTTRPQSNGGFGSLI*PVTSEN
Trigger: GTTTTCTGATGTCACAGGCAAGATCAAACTACCAAA...TCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGCAGCTTTTGGTAGTTTGATCTaGCCTGTGACATCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: NSMDMRKTTRPQSNGGAAFGSLI*PVTSEN
Trigger: GTTTTCTGATGTCACAGGCAAGATCAAACTACCAAA...AGCTGCTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp CCAAGAACTCCATGGACATGCGCAAGACCACCAGGCCCCAGAGCAATGGAGGAGTTTGGTAGTTTGATCTaGCCTGTGACATCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: PRTPWTCARPPGPRAMEEFGSLI*PVTSEN
Trigger: GTTTTCTGATGTCACAGGCAAGATCAAACTACCAAA...CTCCTCCATTGCTCTGGGGCCTGGTGGTCTTGCGCATGTCCATGGAGTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCCAGCGAGCCCCAAACTaGGACAGCAGCCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTQRAPN*DSSLFS
Trigger: GGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTG...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTTCCGTGGGGTGATGTaGAAGGGAGGTCCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMFRGVM*KGGPGR
Trigger: CCGGCCTGGACCTCCCTTCAACATCACCCCACGGAA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGGGAGGAAGCCCAGGTaGTCGTCCAGGTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMGRKPR*SSRSVA
Trigger: AGCCACTGACCTGGACGACAACCTGGGCTTCCTCCC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS CCA 90 bp GTAATACATCTTCTCAACAGGGACCCAGTGTTTTGGCTTTCGGTCTaGGGGTATGGTGATGCTGTACTCCCAGCCTTGTTCATCAACAGC +
Preference number: 5 (lower is better)
Translates to: VIHLLNRDPVFWLSV*GYGDAVLPALFINS
Trigger: GCTGTTGATGAACAAGGCTGGGAGTACAGCATCACCATACCCCCAGACCGAAAGCCAAAACACTGGGTCCCTGTTGAGAAGATGTATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTCCTGGAGTGGGATCTaGGCTTCCCCCAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMSWSGI*ASPRNL
Trigger: CAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGGA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAGCCAGCTGATGGAATaGTCTCGGGGGCATGGGGAT +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTSQLME*SRGHGD
Trigger: ATCCCCATGCCCCCGAGACAATTCCATCAGCTGGCT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGCCGTCTTGGCTGGCTaGGGCATTCGGTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMAVLAG*GIRLRS
Trigger: GGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCACTTCTCAGCCGTCTaGGCTGGCTTGGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMHFSAV*AGLGIR
Trigger: CCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS CCA 90 bp CTTAATGTTCTGGGGAACCATGTAGATGTTGGCCTCCCTTTGAGGTaGTGGGTAAGGCAAATCTGTGTCCTCCGTCTCATCCAAAATCCT +
Preference number: 5 (lower is better)
Translates to: LNVLGNHVDVGLPLR*WVRQICVLRLIQNP
Trigger: AGGATTTTGGATGAGACGGAGGACACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCCAACATCTACATGGTTCCCCAGAACATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGTTCACATTGGGGAGGTaGCTGGCCCTTGCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMFTLGR*LALASK
Trigger: CTTGCTGGCAAGGGCCAGCAACCTCCCCAATGTGAA...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGGTCCTTCTTCACATaGGGGAGGTTGCTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMRSFFT*GRLLAL
Trigger: AAGGGCCAGCAACCTCCCCAATGTGAAGAAGGACCG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCTCAGAGAAGGAGTCCTaGTCCATGGCTGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRSEKES*SMAGRS
Trigger: AGACCTGCCAGCCATGGACAAGGACTCCTTCTCTGA...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGATGTTGGCCTCCCTTaGAGGTGGTGGGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRDVGLP*RWWVRQ
Trigger: TTGCCTTACCCACCACCTCAAAGGGAGGCCAACATC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAGGAACCAAGCCTTGTaGCTGAAGGACATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTRNQAL*LKDMQG
Trigger: GCCCTGCATGTCCTTCAGCAACAAGGCTTGGTTCCT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAACACGAACCTCCAGTaGAAATTGCCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTNTNLQ*KLPSPP
Trigger: GGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGTT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGAACACGAACCTCCAGTaGAAATTGCCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWNTNLQ*KLPSPP
Trigger: GGGTGGGGAGGGCAATTTCAACTGGAGGTTCGTGTT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGGCAACAGCACAGACTaGCTCAGCAGGCAGATAGTC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTGNSTD*LSRQIV
Trigger: GACTATCTGCCTGCTGAGCAAGTCTGTGCTGTTGCC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS TCA 90 bp TTCTCATACGTTTCGGCAAAGACAGAGAGCTTTCCCTCAGCAAACTaGTTGAATTCCTTCTCATCCACAGAGAGCCCGAACCAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: FSYVSAKTESFPSAN*LNSFSSTESPNQSL
Trigger: CAAGCTCTGGTTCGGGCTCTCTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGGGAAAGCTCTCTGTCTTTGCCGAAACGTATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 90 bp TGTAGTTATCCTGGTCACTCACTGATTTCTTCCCTATGGAGATCTTaGTGTAAGGGTCACACTTGCCATTGGGGTCCTTGGGCTGTAAGC +
Preference number: 5 (lower is better)
Translates to: CSYPGHSLISSLWRS*CKGHTCHWGPWAVS
Trigger: GCTTACAGCCCAAGGACCCCAATGGCAAGTGTGACCCTTACATCAAGATCTCCATAGGGAAGAAATCAGTGAGTGACCAGGATAACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCTGTGTTCCACCAGTTaGGTCTCCAGGGACAACAGA +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRLCSTS*VSRDNR
Trigger: TCTGTTGTCCCTGGAGACCAAACTGGTGGAACACAG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGCTGTACTCCCAGCCTaGTTCATCAACAGCCCGATT +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTAVLPA*FINSPI
Trigger: AATCGGGCTGTTGATGAACAAGGCTGGGAGTACAGC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCGCTGTACTCCCAGCCTaGTTCATCAACAGCCCGATT +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRAVLPA*FINSPI
Trigger: AATCGGGCTGTTGATGAACAAGGCTGGGAGTACAGC...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTTGCCATTGGGGTCCTaGGGCTGTAAGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWLPLGS*GCKPNA
Trigger: AGCATTTGGCTTACAGCCCAAGGACCCCAATGGCAA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGGCAACAGCACAGACTaGCTCAGCAGGCAGATAGTC +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMGNSTD*LSRQIV
Trigger: GACTATCTGCCTGCTGAGCAAGTCTGTGCTGTTGCC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGACACGTGCTGGGATCTaGCTCTCTGTCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWTRAGI*LSVLSS
Trigger: ACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTCTAGAGGAATACCTTaGAGGTCCCACTCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTSRGIP*RSHSKP
Trigger: GGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCATCGTCTCATGGTCCTaGACCACCACGAGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTIVSWS*TTTRSS
Trigger: AGAACTTCTCGTGGTGGTCAAGGACCATGAGACGAT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCCAGCAGCTGTGACCTaGACCACAGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRPAAVT*TTGLIF
Trigger: GAATATTAAGCCTGTGGTCAAGGTCACAGCTGCTGG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCGTCTTCTCCAGGATCTaGCTGCAGAGCATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTVFSRI*LQSIFP
Trigger: TGGGAAAATGCTCTGCAGCAAGATCCTGGAGAAGAC...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGGGGAGGAAGCCCAGGTaGTCGTCCACTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMGRKPR*SSTSIS
Trigger: AGAAATAGAAGTGGACGACAACCTGGGCTTCCTCCC...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000081904.7
ENSMUST00000113818.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGTCATCAACAGCCCGATaGAGGTCTGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWSSTAR*RSVDHS
Trigger: AGAATGGTCCACAGACCTCAATCGGGCTGTTGATGA...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCACTGTCTTCTGGCTTaGATGCAGGAAGGAGACGAT +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRHCLLA*MQEGDD
Trigger: ATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGACACGTGCTGGGATCTaGCTCTCTGTCTTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMTRAGI*LSVLSS
Trigger: ACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCCAGCAGCTGTGACCTaGACCACAGGCTTAATATTC +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMPAAVT*TTGLIF
Trigger: GAATATTAAGCCTGTGGTCAAGGTCACAGCTGCTGG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGCCTTCAATGTCCTCTTaGTCTTCAGAAGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWPSMSS*SSEGSF
Trigger: GAAGGACCCTTCTGAAGACAAAGAGGACATTGAAGG...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGAAGCCAAAGATCTGCTaGACGTTGTCCATCACAGCA +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWKPKIC*TLSITA
Trigger: TGCTGTGATGGACAACGTCAAGCAGATCTTTGGCTT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCACTGTCTTCTGGCTTaGATGCAGGAAGGAGACGAT +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMHCLLA*MQEGDD
Trigger: ATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTG...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGATAGAAGATGAGGGTTaGATCCCAGGTGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWIEDEG*IPGGIQ
Trigger: CTGAATCCCACCTGGGATCAAACCCTCATCTTCTAT...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGTTCTGTCTGCTTTATACTGAGAAAGCCAAGAGTTTATCCAGAGGAGTGTTGGGGGTTCACACTGTTCTaGATGACTTTGGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GSVCFILRKPRVYPEECWGFTLF*MTLVLF
Trigger: GAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCC...CCAACACTCCTCTGGATAAACTCTTGGCTTTCTCAGTATAAAGCAGACAGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCCGATTATCAATGACCTaGACCACAATAGGTGGACAG +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRRLSMT*TTIGGQ
Trigger: CTGTCCACCTATTGTGGTCAAGGTCATTGATAATCG...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCAAGAAAAGAGTCTCATaGAAGAGTGGGCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTKKRVS*KSGLFP
Trigger: GGGAAATAGCCCACTCTTCAATGAGACTCTTTTCTT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCACCAAGTTCTTCTTGTaGCTGTCAAAGCCAAAGATC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTTKFFL*LSKPKI
Trigger: GATCTTTGGCTTTGACAGCAACAAGAAGAACTTGGT...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp GGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCACAGAAGCAAAGAATTaGCTCCACCAGTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: GEREDENNVIPKNSMDMRTEAKN*LHQSMN
Trigger: GTTCATTGACTGGTGGAGCAAATTCTTTGCTTCTGT...GCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGCGCAAGACCTTTGGTAGTTTGATCTaGCCTGTGACATCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: REDENNVIPKNSMDMRKTFGSLI*PVTSEN
Trigger: GTTTTCTGATGTCACAGGCAAGATCAAACTACCAAA...GGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS-3UTR CAA 90 bp AGGGGAGAAAGAGAAGATGAAAATAACGTGATTCCCAAGAACTCCATGGACATGAAAGAGAATTTGTCATaGTCCCAGATCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: RGEREDENNVIPKNSMDMKENLS*SQIWKT
Trigger: GGTCTTCCAGATCTGGGACAATGACAAATTCTCTTT...CATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATCTTCTCTTTCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000168387.8
CDS GCA 72 bp GCTCGAACGCTGCCAGCAGCTCGCCGGCAGGCTGGCTaGCCCGGGTCAGTGGGAACCAGGCCAGGCGGGGCA +
Preference number: 6 (lower is better)
Translates to: ARTLPAARRQAG*PGSVGTRPGGA
Trigger: TGCCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGCCAGCCTGCCGGCGAGCTGCTGGCAGCGTTCGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CAGCAGCTCGCCGGCAGGCTGGCTGCCCCGGGTCAGTaGGAACCAGGCCAGGCGGGGCATCCGTTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: QQLAGRLAAPGQ*EPGQAGHPFQA
Trigger: AGCCTGGAACGGATGCCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCAGCCAGCCTGCCGGCGAGCTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp AGGCTGTTCTGGGGCTCCTCGGCCAGGGCACGGAGATaGAGAAGCCAGTCCTCGGCCTGCTCCAGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RLFWGSSARARR*RSQSSACSRAV
Trigger: CACTGCCCTGGAGCAGGCCGAGGACTGGCTTCTGCATCTCCGTGCCCTGGCCGAGGAGCCCCAGAACAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp AGCAGGTGGTGGGAACAGGGGCACAGCTCCTGGGGGTaGCGTGTAGGACACCTGCAGGACCAGAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: SRWWEQGHSSWG*RVGHLQDQRGP
Trigger: GGGGCCTCTCTGGTCCTGCAGGTGTCCTACACGCCACCCCCAGGAGCTGTGCCCCTGTTCCCACCACCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GTGGGAAGGTGGCTTCCTGGGTGTGGTCGGTCCCCCTaGGCCCACAGCAGCACTCTGGTCCAGGAACGGCTC +
Preference number: 6 (lower is better)
Translates to: VGRWLPGCGRSP*AHSSTLVQERL
Trigger: GAGCCGTTCCTGGACCAGAGTGCTGCTGTGGGCCCAGGGGGACCGACCACACCCAGGAAGCCACCTTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CTGCCTGCCTGTGCCTCTTCAGTGCTTCCATCTGGCTaGGGTCCCTCCTGCGCAGTCGGACCCAGCGTCGAC +
Preference number: 6 (lower is better)
Translates to: LPACASSVLPSG*GPSCAVGPSVD
Trigger: GTCGACGCTGGGTCCGACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCACTGAAGAGGCACAGGCAGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GCCTCTGCCTGCCTGTGCCTCTTCAGTGCTTCCATCTaGCTGAGGTCCCTCCTGCGCAGTCGGACCCAGCGT +
Preference number: 6 (lower is better)
Translates to: ASACLCLFSASI*LRSLLRSRTQR
Trigger: ACGCTGGGTCCGACTGCGCAGGAGGGACCTCAGCCAGATGGAAGCACTGAAGAGGCACAGGCAGGCAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp AGAGAGGCCCCCGTGGGTTGCTGCTTGGCGTCTAGCAGAGGTGCGTaGAAGCTGGCAGAGAGGCTGGGGGTGGCAAGGACCTCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: REAPVGCCLASSRGA*KLAERLGVARTSWS
Trigger: ACTCCAGGAGGTCCTTGCCACCCCCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAGACGCCAAGCAGCAACCCACGGGGGCCTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp GACACCTGCAGGACCAGAGAGGCCCCCGTGGGTTGCTaGTTGGCGTCTAGCAGAGGTGCGTTGAAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: DTCRTREAPVGC*LASSRGALKLA
Trigger: TGCCAGCTTCAACGCACCTCTGCTAGACGCCAAGCAGCAACCCACGGGGGCCTCTCTGGTCCTGCAGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp GAGAGAGGCATACTCCCAGCCCTCGCCCTCGGCCTCTaGCTGCCTGTGCCTCTTCAGTGCTTCCATCTGGCT +
Preference number: 6 (lower is better)
Translates to: ERGILPALALGL*LPVPLQCFHLA
Trigger: AGCCAGATGGAAGCACTGAAGAGGCACAGGCAGGCAGAGGCCGAGGGCGAGGGCTGGGAGTATGCCTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GGTAAGTCCTCAGCCCGGAAGAGCTTCAGGCAGAAGTaGGCTCCTCGAAGGGCCACACCGGTGGGCCTAAGC +
Preference number: 6 (lower is better)
Translates to: GKSSARKSFRQK*APRRATPVGLS
Trigger: GCTTAGGCCCACCGGTGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCTCTTCCGGGCTGAGGACTTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp ACCTGCAGGACCAGAGAGGCCCCCGTGGGTTGCTGCTaGGCGTCTAGCAGAGGTGCGTTGAAGCTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: TCRTREAPVGCC*ASSRGALKLAE
Trigger: CTCTGCCAGCTTCAACGCACCTCTGCTAGACGCCAAGCAGCAACCCACGGGGGCCTCTCTGGTCCTGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp CACCATAGGTGTCGTGGTCATAGAGCTCCACCACGATaGAGGGCGGATGCTCGGCGATACTGGCTGGCTCGC +
Preference number: 6 (lower is better)
Translates to: HHRCRGHRAPPR*RADARRYWLAR
Trigger: GCGAGCCAGCCAGTATCGCCGAGCATCCGCCCTGCATCGTGGTGGAGCTCTATGACCACGACACCTATGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GGCGTAGGGATCAGAGAAGGAGTCCTTGTCCATGGCTaGCAGGTCTCGGGCCTGGTACAGGTAGCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: GVGIREGVLVHG*QVSGLVQVAAQ
Trigger: CTGCGCTGCTACCTGTACCAGGCCCGAGACCTGCCAGCCATGGACAAGGACTCCTTCTCTGATCCCTACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp GGCTGGCTGCAGTCTGCAAGGAGCTCATCTGTCAACTaGGCCACCAGGGCGTCCACATCCTCGGAGGAACAC +
Preference number: 6 (lower is better)
Translates to: GWLQSARSSSVN*ATRASTSSEEH
Trigger: GTGTTCCTCCGAGGATGTGGACGCCCTGGTGGCTCAGTTGACAGATGAGCTCCTTGCAGACTGCAGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp TCCGGAGATAAGCGTGTCGGGGCTCTCTGTACACGGTaGCCACATCCATCCGGAACTCGCCAAGGAGGGCAT +
Preference number: 6 (lower is better)
Translates to: SGDKRVGALCTR*PHPSGTRQGGH
Trigger: ATGCCCTCCTTGGCGAGTTCCGGATGGATGTGGGCACCGTGTACAGAGAGCCCCGACACGCTTATCTCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp TCGGAGGAACACTGTGCCTTCAGAGCCAAGTGGACCTaGTCCAGGTTAGCTTCCAGGCGGTCAGCGACCCTG +
Preference number: 6 (lower is better)
Translates to: SEEHCAFRAKWT*SRLASRRSATL
Trigger: CAGGGTCGCTGACCGCCTGGAAGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp AGCCACCAGGGCGTCCACATCCTCGGAGGAACACTGTaGCTTCAGAGCCAAGTGGACCTGCTCCAGGTTAGC +
Preference number: 6 (lower is better)
Translates to: SHQGVHILGGTL*LQSQVDLLQVS
Trigger: GCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAGGATGTGGACGCCCTGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp TGGGAACCAGGCCAGGCGGGGCATCCGTTCCAGGCTTaGCTGACAAATACAGCGACCCATGAACTCGTCAGC +
Preference number: 6 (lower is better)
Translates to: WEPGQAGHPFQA*LTNTATHELVS
Trigger: GCTGACGAGTTCATGGGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGCCCCGCCTGGCCTGGTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CGGGGCGCCTTGGATCCTCTAGCTTCGGATTCATGTTaGGTTCATCCCGACCTTGGCCAGCAGGCCGCTCTT +
Preference number: 6 (lower is better)
Translates to: RGALDPLASDSC*VHPDLGQQAAL
Trigger: AAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCCAACATGAATCCGAAGCTAGAGGATCCAAGGCGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp CTGGCAACTGGATCGCTGCGCCGGTCCTTCTTCACATaGGGGAGGTTGCTGGCCCTTGCCAGCAAGCAACAG +
Preference number: 6 (lower is better)
Translates to: LATGSLRRSFFT*GRLLALASKQQ
Trigger: CTGTTGCTTGCTGGCAAGGGCCAGCAACCTCCCCAATGTGAAGAAGGACCGGCGCAGCGATCCAGTTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204987.3
CDS CAA 72 bp GGAGCTGGGAGGGGCGGAGCTGATCTCTCCACTGATTaGGTCCAGAGACACAGTAGGTCTGTGGGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: GAGRGGADLSTD*VQRHSRSVGAH
Trigger: GTGGGCTCCCACAGACCTACTGTGTCTCTGGACCAAATCAGTGGAGAGATCAGCTCCGCCCCTCCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TCGGGGCGCCTTGGATCCTCTAGCTTCGGATTCATGTaGGGTTCATCCCGACCTTGGCCAGCAGGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: SGRLGSSSFGFM*GSSRPWPAGRS
Trigger: AGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCCAACATGAATCCGAAGCTAGAGGATCCAAGGCGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp TCTTCCCAGAGTATCTCGTGTCCATGGTGCTGTCACTaGGCAGGGACCAAGTCTCAGCCCGGCTCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SSQSISCPWCCH*AGTKSQPGSVP
Trigger: GGGGACAGAGCCGGGCTGAGACTTGGTCCCTGCTCAGTGACAGCACCATGGACACGAGATACTCTGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000113823.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204591.3
CDS TCA 72 bp TTACCCCTGCAAACACCGCGGAGCAGTAGGCATCGCTaGTGTCGGAGTCCGGGGTGTGGACATTCTCCGCAA +
Preference number: 6 (lower is better)
Translates to: LPLQTPRSSRHR*CRSPGCGHSPQ
Trigger: TTGCGGAGAATGTCCACACCCCGGACTCCGACATCAGCGATGCCTACTGCTCCGCGGTGTTTGCAGGGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203803.3
ENSMUST00000204591.3
CDS CCA 72 bp ACATCCTCGGAGGAACACTGTGCCTTCAGAGCCAAGTaGACCTGCTCCAGGTTAGCTTCCAGGCGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: TSSEEHCAFRAK*TCSRLASRRSA
Trigger: CGCTGACCGCCTGGAAGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAGGATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp AAGCTCAGGGTAGAAACAGACATGGAGTCTTCGCTCTaGTCATCCACCATGCCGCCCAGGGCCCCCTCGAGG +
Preference number: 6 (lower is better)
Translates to: KLRVETDMESSL*SSTMPPRAPSR
Trigger: CCTCGAGGGGGCCCTGGGCGGCATGGTGGATGACAAGAGCGAAGACTCCATGTCTGTTTCTACCCTGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TGGTCCAAGGAGCACTTCTCAGCCGTCTTGGCTGGCTaGGGCATTCGGTTGAGATCCAGCTGCAGAGAGCCC +
Preference number: 6 (lower is better)
Translates to: WSKEHFSAVLAG*GIRLRSSCREP
Trigger: GGGCTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTGCTCCTTGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp GGGGAGGAAGCCCAGGTTGTCGTCCAGGTCAGTGGCTaGTGGACTCTTGAGTACACCTGCAGGCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: GEEAQVVVQVSG*WTLEYTCRLLF
Trigger: GAAGAGGAGCCTGCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTGGACGACAACCTGGGCTTCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204987.3
CDS TCA 72 bp CACTATGGCCAAGCTTCAAGGCCAGAGCAGCTTCTTTaGTCTGGCTCAGGTGACGGGTGCGTAGCCGGAGCA +
Preference number: 6 (lower is better)
Translates to: HYGQASRPEQLL*SGSGDGCVAGA
Trigger: TGCTCCGGCTACGCACCCGTCACCTGAGCCAGATCAAAGAAGCTGCTCTGGCCTTGAAGCTTGGCCATAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp ATTCCTTCTCATCCACAGAGAGCCCGAACCAGAGCTTaGTCCGAATCTGCACGGGCATTCGGGCCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: IPSHPQRARTRA*SESARAFGPQA
Trigger: TGCCTGGGGCCCGAATGCCCGTGCAGATTCGGATCAAGCTCTGGTTCGGGCTCTCTGTGGATGAGAAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp TCGCACAGGAAGTTCTCCAGGGAGCGAATGGTACACTaGCCCACAACTGGCCGGCGGCCAAACTGGCGATTA +
Preference number: 6 (lower is better)
Translates to: SHRKFSRERMVH*PTTGRRPNWRL
Trigger: TAATCGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGAACTTCCTGTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp TCCACAGAGAGCCCGAACCAGAGCTTGATCCGAATCTaGACGGGCATTCGGGCCCCAGGCATACCTTCCATA +
Preference number: 6 (lower is better)
Translates to: STESPNQSLIRI*TGIRAPGIPSI
Trigger: TATGGAAGGTATGCCTGGGGCCCGAATGCCCGTGCAGATTCGGATCAAGCTCTGGTTCGGGCTCTCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp TCCTCGGCCTGCTCCAGGGCAGTGGAGAGCTCACTATaGCCAAGCTTCAAGGCCAGAGCAGCTTCTTTGATC +
Preference number: 6 (lower is better)
Translates to: SSACSRAVESSL*PSFKARAASLI
Trigger: GATCAAAGAAGCTGCTCTGGCCTTGAAGCTTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGGCCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp AGTATGGGTCGCACAGGAAGTTCTCCAGGGAGCGAATaGTACACTGACCCACAACTGGCCGGCGGCCAAACT +
Preference number: 6 (lower is better)
Translates to: SMGRTGSSPGSE*YTDPQLAGGQT
Trigger: AGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGAACTTCCTGTGCGACCCATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CAGCTGGTCCAAGGAGCACTTCTCAGCCGTCTTGGCTaGCTTGGGCATTCGGTTGAGATCCAGCTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: QLVQGALLSRLG*LGHSVEIQLQR
Trigger: TCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTGCTCCTTGGACCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GACTGCCATAGAGGTTCACATAGCAGGGCCCAAAAGTaGGGAGGAAGCCCAGGTTGTCGTCCAGGTCAGTGG +
Preference number: 6 (lower is better)
Translates to: DCHRGSHSRAQK*GGSPGCRPGQW
Trigger: CCACTGACCTGGACGACAACCTGGGCTTCCTCCCCACTTTTGGGCCCTGCTATGTGAACCTCTATGGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204987.3
CDS CAA 72 bp AATTCCTTCTCATCCACAGAGAGCCCGAACCAGAGCTaGATCCGAATCTGCACGGGCATTCGGGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: NSFSSTESPNQS*IRICTGIRAPG
Trigger: GCCTGGGGCCCGAATGCCCGTGCAGATTCGGATCAAGCTCTGGTTCGGGCTCTCTGTGGATGAGAAGGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TCATCCAGCTGGTCCAAGGAGCACTTCTCAGCCGTCTaGGCTGGCTTGGGCATTCGGTTGAGATCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSSWSKEHFSAV*AGLGIRLRSSC
Trigger: GCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTGCTCCTTGGACCAGCTGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp CAGAAGTGGGCTCCTCGAAGGGCCACACCGGTGGGCCTAAGCAGGTaGCCTTCAATGTCCTCTTTGTCTTCAGAAGGGTCCTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: QKWAPRRATPVGLSR*PSMSSLSSEGSFLS
Trigger: GGACAAGAAGGACCCTTCTGAAGACAAAGAGGACATTGAAGGCAACCTGCTTAGGCCCACCGGTGTGGCCCTTCGAGGAGCCCACTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp TTAACGCCAAAGCTCAGGGTAGAAACAGACATGGAGTCTTCGCTCTaGTCATCCACCATGCCGCCCAGGGCCCCCTCGAGGGCAAACACA +
Preference number: 6 (lower is better)
Translates to: LTPKLRVETDMESSL*SSTMPPRAPSRANT
Trigger: TGTGTTTGCCCTCGAGGGGGCCCTGGGCGGCATGGTGGATGACAAGAGCGAAGACTCCATGTCTGTTTCTACCCTGAGCTTTGGCGTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp GGACATGCAGGGCTAAGCGTTCCTCCACTGGGCCCAGGTGTGGGTTaGGGAGTCTGCCAGCCTCTATCTCCTCAATGGTGTAGTCCTTAT +
Preference number: 6 (lower is better)
Translates to: GHAGLSVPPLGPGVG*GVCQPLSPQWCSPY
Trigger: ATAAGGACTACACCATTGAGGAGATAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCCCAGTGGAGGAACGCTTAGCCCTGCATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp TCATCCAGCTGGTCCAAGGAGCACTTCTCAGCCGTCTTGGCTGGCTaGGGCATTCGGTTGAGATCCAGCTGCAGAGAGCCCAGAAAGTCA +
Preference number: 6 (lower is better)
Translates to: SSSWSKEHFSAVLAG*GIRLRSSCREPRKS
Trigger: TGACTTTCTGGGCTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTGCTCCTTGGACCAGCTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CGTGACTCCACATGCTCAGGAACCAAGCCTTGTTGCTaGAGGACATGCAGGGCTAAGCGTTCCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: RDSTCSGTKPCC*RTCRAKRSSTG
Trigger: CCCAGTGGAGGAACGCTTAGCCCTGCATGTCCTTCAGCAACAAGGCTTGGTTCCTGAGCATGTGGAGTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp GTAGGTGAGGCCCGTTGTGCCCCAGTTCCCGACCAGTaGCAGCTTTGTCTGGTTCTCATACGTTTCGGCAAA +
Preference number: 6 (lower is better)
Translates to: VGEARCAPVPDQ*QLCLVLIRFGK
Trigger: TTTGCCGAAACGTATGAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGGGGCACAACGGGCCTCACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CACCACGATGCAGGGCGGATGCTCGGCGATACTGGCTaGCTCGCCGAAGATCTCAATCTCATAGAAGATGAG +
Preference number: 6 (lower is better)
Translates to: HHDAGRMLGDTG*LAEDLNLIEDE
Trigger: CTCATCTTCTATGAGATTGAGATCTTCGGCGAGCCAGCCAGTATCGCCGAGCATCCGCCCTGCATCGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp TCTCCACTGATTTGGTCCAGAGACACAGTAGGTCTGTaGGAGCCCACAGCGAGCCCCAAACTTGGACAGCAG +
Preference number: 6 (lower is better)
Translates to: SPLIWSRDTVGL*EPTASPKLGQQ
Trigger: CTGCTGTCCAAGTTTGGGGCTCGCTGTGGGCTCCCACAGACCTACTGTGTCTCTGGACCAAATCAGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GTCCTCCGTCTCAAAGCCAGGGATGTGATGGATGGCTaGCTTCTCTCTCTGGATAAGCTCGAACGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: VLRLKARDVMDG*LLSLDKLERCQ
Trigger: CTGGCAGCGTTCGAGCTTATCCAGAGAGAGAAGCCAGCCATCCATCACATCCCTGGCTTTGAGACGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203803.3
CDS CAA 72 bp GGCCCGTTGTGCCCCAGTTCCCGACCAGTGCCAGCTTaGTCTGGTTCTCATACGTTTCGGCAAAGACAGAGA +
Preference number: 6 (lower is better)
Translates to: GPLCPSSRPVPA*SGSHTFRQRQR
Trigger: TCTCTGTCTTTGCCGAAACGTATGAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGGGGCACAACGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp CCCAAAAGTGGGGAGGAAGCCCAGGTTGTCGTCCAGGTCAGTGGCTaGTGGACTCTTGAGTACACCTGCAGGCTCCTCTTCTATTTCTCC +
Preference number: 6 (lower is better)
Translates to: PKSGEEAQVVVQVSG*WTLEYTCRLLFYFS
Trigger: GGAGAAATAGAAGAGGAGCCTGCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTGGACGACAACCTGGGCTTCCTCCCCACTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204987.3
CDS TCA 72 bp GGACCCAGTGTTTTGGCTTTCGGTCTGGGGGTATGGTaGTGCTGTACTCCCAGCCTTGTTCATCAACAGCCC +
Preference number: 6 (lower is better)
Translates to: GPSVLAFGLGVW*CCTPSLVHQQP
Trigger: GGGCTGTTGATGAACAAGGCTGGGAGTACAGCATCACCATACCCCCAGACCGAAAGCCAAAACACTGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp GTTCCTCCACTGGGCCCAGGTGTGGGTTTGGGAGTCTaGCAGCCTCTATCTCCTCAATGGTGTAGTCCTTAT +
Preference number: 6 (lower is better)
Translates to: VPPLGPGVGLGV*QPLSPQWCSPY
Trigger: ATAAGGACTACACCATTGAGGAGATAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCCCAGTGGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GTTCTCCAGGGAGCGAATGGTACACTGACCCACAACTaGCCGGCGGCCAAACTGGCGATTATCAATGACCTT +
Preference number: 6 (lower is better)
Translates to: VLQGANGTLTHN*PAAKLAIINDL
Trigger: AAGGTCATTGATAATCGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GAGGAAGCCCAGGTTGTCGTCCAGGTCAGTGGCTTGTaGACTCTTGAGTACACCTGCAGGCTCCTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: EEAQVVVQVSGL*TLEYTCRLLFY
Trigger: ATAGAAGAGGAGCCTGCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTGGACGACAACCTGGGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204987.3
CDS CAA 72 bp CACTTCTCAGCCGTCTTGGCTGGCTTGGGCATTCGGTaGAGATCCAGCTGCAGAGAGCCCAGAAAGTCATCA +
Preference number: 6 (lower is better)
Translates to: HFSAVLAGLGIR*RSSCREPRKSS
Trigger: TGATGACTTTCTGGGCTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp AGCAGGTTGCCTTCAATGTCCTCTTTGTCTTCAGAAGGGTCCTTCTaGTCCAGGGGAGCTTCATCTCCAGGCCCTAGCACACACAGGCTG +
Preference number: 6 (lower is better)
Translates to: SRLPSMSSLSSEGSF*SRGASSPGPSTHRL
Trigger: CAGCCTGTGTGTGCTAGGGCCTGGAGATGAAGCTCCCCTGGACAAGAAGGACCCTTCTGAAGACAAAGAGGACATTGAAGGCAACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp AAAGAAGTATCGGGGCGCCTTGGATCCTCTAGCTTCGGATTCATGTaGGGTTCATCCCGACCTTGGCCAGCAGGCCGCTCTTCATGTTCA +
Preference number: 6 (lower is better)
Translates to: KEVSGRLGSSSFGFM*GSSRPWPAGRSSCS
Trigger: TGAACATGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCCAACATGAATCCGAAGCTAGAGGATCCAAGGCGCCCCGATACTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp ACCTTGACCACAGGCTTAATATTCACCCCAGGCAGCTaGCGCCCCTCTATCACCTGGACTCTGATCTGGAAG +
Preference number: 6 (lower is better)
Translates to: TLTTGLIFTPGS*RPSITWTLIWK
Trigger: CTTCCAGATCAGAGTCCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAATATTAAGCCTGTGGTCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp GTCTGGTTCTCGAACACCTCCTCCACGAAGCTCAGATaGCCAGCGTCAGCATCATGGAGTAGGGTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: VWFSNTSSTKLR*PASASWSRVFS
Trigger: AGAGAAGACCCTACTCCATGATGCTGACGCTGGTCATCTGAGCTTCGTGGAGGAGGTGTTCGAGAACCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CCCCAAACTTGGACAGCAGCCTGTTCTCCAGGTCTATaGCCGTCTCCCCAATCTTCTCATCCTTGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: PQTWTAACSPGL*PSPQSSHPWRA
Trigger: TGCTCTCCAAGGATGAGAAGATTGGGGAGACGGTCATAGACCTGGAGAACAGGCTGCTGTCCAAGTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp ACTTCTCAGCCGTCTTGGCTGGCTTGGGCATTCGGTTaGGATCCAGCTGCAGAGAGCCCAGAAAGTCATCAA +
Preference number: 6 (lower is better)
Translates to: TSQPSWLAWAFG*DPAAESPESHQ
Trigger: TTGATGACTTTCTGGGCTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CCAGGTTGTCGTCCAGGTCAGTGGCTTGTGGACTCTTaGGTACACCTGCAGGCTCCTCTTCTATTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: PGCRPGQWLVDS*VHLQAPLLFLL
Trigger: GAGGAGAAATAGAAGAGGAGCCTGCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTGGACGACAACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204987.3
CDS CCA 72 bp TTCTCCCTTTCCTGTGTTGAGCTCTGCATAAGGATCTaGGAAGCCCGTGAACTCTCGGGGACTGCCATAGAG +
Preference number: 6 (lower is better)
Translates to: FSLSCVELCIRI*EARELSGTAIE
Trigger: CTCTATGGCAGTCCCCGAGAGTTCACGGGCTTCCCAGATCCTTATGCAGAGCTCAACACAGGAAAGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GGTCTTCCACCTTCTGCTCACTGTGTTCCACCAGTTTaGTCTCCAGGGACAACAGAACCCTGCCTCGATAAG +
Preference number: 6 (lower is better)
Translates to: GLPPSAHCVPPV*SPGTTEPCLDK
Trigger: CTTATCGAGGCAGGGTTCTGTTGTCCCTGGAGACCAAACTGGTGGAACACAGTGAGCAGAAGGTGGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GCGACCCTGAGGAGCTGGTTTTGGATCTCAATTCGATaGCTGATGTCTTCCCAGTATGAGGACAGCACCACC +
Preference number: 6 (lower is better)
Translates to: ATLRSWFWISIR*LMSSQYEDSTT
Trigger: GGTGGTGCTGTCCTCATACTGGGAAGACATCAGCCATCGAATTGAGATCCAAAACCAGCTCCTCAGGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GCTTCCAGGCGGTCAGCGACCCTGAGGAGCTGGTTTTaGATCTCAATTCGATGGCTGATGTCTTCCCAGTAT +
Preference number: 6 (lower is better)
Translates to: ASRRSATLRSWF*ISIRWLMSSQY
Trigger: ATACTGGGAAGACATCAGCCATCGAATTGAGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCCTGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp AGGTTAGCTTCCAGGCGGTCAGCGACCCTGAGGAGCTaGTTTTGGATCTCAATTCGATGGCTGATGTCTTCC +
Preference number: 6 (lower is better)
Translates to: RLASRRSATLRS*FWISIRWLMSS
Trigger: GGAAGACATCAGCCATCGAATTGAGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCCTGGAAGCTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CTTCTCAACAGGGACCCAGTGTTTTGGCTTTCGGTCTaGGGGTATGGTGATGCTGTACTCCCAGCCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LLNRDPVFWLSV*GYGDAVLPALF
Trigger: GAACAAGGCTGGGAGTACAGCATCACCATACCCCCAGACCGAAAGCCAAAACACTGGGTCCCTGTTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CCACTGTCTTCTGGCTTTGATGCAGGAAGGAGACGATaGCGTAGGGATCAGAGAAGGAGTCCTTGTCCATGG +
Preference number: 6 (lower is better)
Translates to: PLSSGFDAGRRR*RRDQRRSPCPW
Trigger: CCATGGACAAGGACTCCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp AGCTTCCAGGCGGTCAGCGACCCTGAGGAGCTGGTTTaGGATCTCAATTCGATGGCTGATGTCTTCCCAGTA +
Preference number: 6 (lower is better)
Translates to: SFQAVSDPEELV*DLNSMADVFPV
Trigger: TACTGGGAAGACATCAGCCATCGAATTGAGATCCAAAACCAGCTCCTCAGGGTCGCTGACCGCCTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp ATGAACTCCTCCTCCTGGACAGGAATGAGAGGCTCCTaGTCATCGATGTCAATCAGCACATCTTCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: MNSSSWTGMRGS*SSMSISTSSPG
Trigger: CCCCGGGGAAGATGTGCTGATTGACATCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGGAGGAGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
CDS CAA 72 bp TTGTCCCAGATCTGGAAGACCACACGTGCTGGGATCTaGCTCTCTGTCTTGTCGAGTCTCCAGAAGGCATCC +
Preference number: 6 (lower is better)
Translates to: LSQIWKTTRAGI*LSVLSSLQKAS
Trigger: GGATGCCTTCTGGAGACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTCCAGATCTGGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp CACCAGTCAATGAACTCCTCCTCCTGGACAGGAATGAGAGGCTCCTaGTCATCGATGTCAATCAGCACATCTTCCCCGGGGCTGAGTAAG +
Preference number: 6 (lower is better)
Translates to: HQSMNSSSWTGMRGS*SSMSISTSSPGLSK
Trigger: CTTACTCAGCCCCGGGGAAGATGTGCTGATTGACATCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGGAGGAGTTCATTGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
CDS CAA 90 bp TCCCAGATCTGGAAGACCACACGTGCTGGGATCTTGCTCTCTGTCTaGTCGAGTCTCCAGAAGGCATCCTTCTTGGCAACAGCACAGACT +
Preference number: 6 (lower is better)
Translates to: SQIWKTTRAGILLSV*SSLQKASFLATAQT
Trigger: AGTCTGTGCTGTTGCCAAGAAGGATGCCTTCTGGAGACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTCCAGATCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp TCCGTTCCAGGCTTGGCTGACAAATACAGCGACCCATaGACTCGTCAGCACCATAGGTGTCGTGGTCATAGA +
Preference number: 6 (lower is better)
Translates to: SVPGLADKYSDP*TRQHHRCRGHR
Trigger: TCTATGACCACGACACCTATGGTGCTGACGAGTTCATGGGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CTCGATATCTGGCTGCAGAGGACTATAAAGAGGCCGTaGCTCCACATGCTCAGGAACCAAGCCTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LDIWLQRTIKRP*LHMLRNQALLL
Trigger: CAGCAACAAGGCTTGGTTCCTGAGCATGTGGAGTCACGGCCTCTTTATAGTCCTCTGCAGCCAGATATCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CCCCGACAGAAGCAAAGAATTTGCTCCACCAGTCAATaGACTCCTCCTCATGAGGACTGGATGGAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: PRQKQRICSTSQ*TPPHEDWMEKA
Trigger: CGCCTTCTCCATCCAGTCCTCATGAGGAGGAGTTCATTGACTGGTGGAGCAAATTCTTTGCTTCTGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153860.4
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp GTCCAGGTCAGTGGCTTGTGGACTCTTGAGTACACCTaGAGGCTCCTCTTCTATTTCTCCTCCAGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: VQVSGLWTLEYT*RLLFYFSSSSR
Trigger: TCTGCTACTGGAGGAGAAATAGAAGAGGAGCCTGCAGGTGTACTCAAGAGTCCACAAGCCACTGACCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000089595.12
ENSMUST00000113821.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204987.3
CDS CCA 72 bp GACTGCCATAGAGGTTCACATAGCAGGGCCCAAAAGTaGGGAGGAAGCCCAGGTTGTCGTCCACTTCTATTT +
Preference number: 6 (lower is better)
Translates to: DCHRGSHSRAQK*GGSPGCRPLLF
Trigger: AAATAGAAGTGGACGACAACCTGGGCTTCCTCCCCACTTTTGGGCCCTGCTATGTGAACCTCTATGGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000081904.7
ENSMUST00000113818.8
ENSMUST00000113823.8
ENSMUST00000204354.3
ENSMUST00000204591.3
CDS CCA 72 bp GTTGTGCCCCAGTTCCCGACCAGTGCCAGCTTTGTCTaGTTCTCATACGTTTCGGCAAAGACAGAGAGCTTT +
Preference number: 6 (lower is better)
Translates to: VVPQFPTSASFV*FSYVSAKTESF
Trigger: AAAGCTCTCTGTCTTTGCCGAAACGTATGAGAACCAGACAAAGCTGGCACTGGTCGGGAACTGGGGCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp TTCATGCATCTCAAAGCCAGGGATGTGATGGATGGCTaGCTTCTCTCTCTGGATAAGCTCGAACGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: FMHLKARDVMDG*LLSLDKLERCQ
Trigger: CTGGCAGCGTTCGAGCTTATCCAGAGAGAGAAGCCAGCCATCCATCACATCCCTGGCTTTGAGATGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CCAGGCCAGGATCTCAATGGCAGTACGTTGGAGAGCTaGCTTAATGTTCTGGGGAACCATGTAGATGTTGGC +
Preference number: 6 (lower is better)
Translates to: PGQDLNGSTLES*LNVLGNHVDVG
Trigger: GCCAACATCTACATGGTTCCCCAGAACATTAAGCCAGCTCTCCAACGTACTGCCATTGAGATCCTGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp GTGGGTTTGGGAGTCTGCCAGCCTCTATCTCCTCAATaGTGTAGTCCTTATCCTGAAACGTCACTCGGTCTG +
Preference number: 6 (lower is better)
Translates to: VGLGVCQPLSPQ*CSPYPETSLGL
Trigger: CAGACCGAGTGACGTTTCAGGATAAGGACTACACCATTGAGGAGATAGAGGCTGGCAGACTCCCAAACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp TTAGTGGGGCCCAAGCTTGACAGCCCATCTGTAAGCTaGACAGGAATGAGAGGCTCCTTGTCATCGATGTCA +
Preference number: 6 (lower is better)
Translates to: LVGPKLDSPSVS*TGMRGSLSSMS
Trigger: TGACATCGATGACAAGGAGCCTCTCATTCCTGTCCAGCTTACAGATGGGCTGTCAAGCTTGGGCCCCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153860.4
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TGGAAGACCACACGTGCTGGGATCTTGCTCTCTGTCTaGTCGAGTCTCCAGAAGGCATCCTTCTTGGCAACA +
Preference number: 6 (lower is better)
Translates to: WKTTRAGILLSV*SSLQKASFLAT
Trigger: TGTTGCCAAGAAGGATGCCTTCTGGAGACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp TCCAAGGAGCACTTCTCAGCCGTCTTGGCTGGCTTGGGCATTCGGTaGAGATCCAGCTGCAGAGAGCCCAGAAAGTCATCAAAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: SKEHFSAVLAGLGIR*RSSCREPRKSSKEN
Trigger: ATTCTCTTTTGATGACTTTCTGGGCTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAGAAGTGCTCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp AGGTCCCACTCAAAGCCCTCATTCCACACGGGGTTCACACTGTTCTaGATGACTTTGGTTCTCTTCTTTACCCCTGCAAACACCGCGGAG +
Preference number: 6 (lower is better)
Translates to: RSHSKPSFHTGFTLF*MTLVLFFTPANTAE
Trigger: CTCCGCGGTGTTTGCAGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCCCGTGTGGAATGAGGGCTTTGAGTGGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203803.3
ENSMUST00000204591.3
CDS CAA 90 bp AGCTGGCTTAATGTTCTGGGGAACCATGTAGATGTTGGCCTCCCTTaGAGGTGGTGGGTAAGGCAAATCTGTGTCCTCCGTCTCAAAGCC +
Preference number: 6 (lower is better)
Translates to: SWLNVLGNHVDVGLP*RWWVRQICVLRLKA
Trigger: GGCTTTGAGACGGAGGACACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCCAACATCTACATGGTTCCCCAGAACATTAAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203803.3
CDS CAA 90 bp AGCTGGCTTAATGTTCTGGGGAACCATGTAGATGTTGGCCTCCCTTaGAGGTGGTGGGTAAGGCAAATCTGTGTCCTCCGTCTCATCCAA +
Preference number: 6 (lower is better)
Translates to: SWLNVLGNHVDVGLP*RWWVRQICVLRLIQ
Trigger: TTGGATGAGACGGAGGACACAGATTTGCCTTACCCACCACCTCAAAGGGAGGCCAACATCTACATGGTTCCCCAGAACATTAAGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CGAGAAGTTCTGAGCTCTGATCTAGAGGAATACCTTTaGGGTCCCACTCAAAGCCCTCATTCCACACGGGGT +
Preference number: 6 (lower is better)
Translates to: REVLSSDLEEYL*GPTQSPHSTRG
Trigger: ACCCCGTGTGGAATGAGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CCAGGAACCTGTTTCTTCCCATCGTCTCATGGTCCTTaGCCACCACGAGAAGTTCTGAGCTCTGATCTAGAG +
Preference number: 6 (lower is better)
Translates to: PGTCFFPSSHGP*PPREVLSSDLE
Trigger: CTCTAGATCAGAGCTCAGAACTTCTCGTGGTGGTCAAGGACCATGAGACGATGGGAAGAAACAGGTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp TGCTGTACTCCCAGCCTTGTTCATCAACAGCCCGATTaGGGTCTGTGGACCATTCTTCATCTTCCCACTTCC +
Preference number: 6 (lower is better)
Translates to: CCTPSLVHQQPD*GLWTILHLPTS
Trigger: GGAAGTGGGAAGATGAAGAATGGTCCACAGACCTCAATCGGGCTGTTGATGAACAAGGCTGGGAGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp AAGAATTTGCTCCACCAGTCAATGAACTCCTCCTCATaGGGACTGGATGGAGAAGGCGTCAGGTTAGTGGGG +
Preference number: 6 (lower is better)
Translates to: KNLLHQSMNSSS*GLDGEGVRLVG
Trigger: CCCCACTAACCTGACGCCTTCTCCATCCAGTCCTCATGAGGAGGAGTTCATTGACTGGTGGAGCAAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000153860.4
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp TTGTGGCTGAGTAGAAGGCAGCAAAGAGGGAATATTTaGGCCTCCGCAGGTACTTCTCCACACGCAGGATAT +
Preference number: 6 (lower is better)
Translates to: LWLSRRQQRGNI*ASAGTSPHAGY
Trigger: ATATCCTGCGTGTGGAGAAGTACCTGCGGAGGCGCAAATATTCCCTCTTTGCTGCCTTCTACTCAGCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CTTTGGTTCTCTTCTTTACCCCTCGAAAAATCAGGCTaGCAACTGGATCGCTGCGCCGGTCCTTCTTCACAT +
Preference number: 6 (lower is better)
Translates to: LWFSSLPLEKSG*QLDRCAGPSSH
Trigger: ATGTGAAGAAGGACCGGCGCAGCGATCCAGTTGCCAGCCTGATTTTTCGAGGGGTAAAGAAGAGAACCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204987.3
CDS CCA 72 bp AAAAGAGTCTCATTGAAGAGTGGGCTATTTCCCTTCTaGATCCGAGTTCGCTTGGTCTGCCCAGCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: KRVSLKSGLFPF*IRVRLVCPAAV
Trigger: CACAGCTGCTGGGCAGACCAAGCGAACTCGGATCCAGAAGGGAAATAGCCCACTCTTCAATGAGACTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CGAACTGGATGGCGTCATCCACATCCTGCAGCATTGTaGCTGAGTAGAAGGCAGCAAAGAGGGAATATTTGC +
Preference number: 6 (lower is better)
Translates to: RTGWRHPHPAAL*LSRRQQRGNIC
Trigger: GCAAATATTCCCTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGGATGACGCCATCCAGTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp CACTGTCTTCTGCTCAAAAAGGGACACAAACCATTCTaGGTGGAAGGTGTCATCCAGCTGGTCCAAGGAGCA +
Preference number: 6 (lower is better)
Translates to: HCLLLKKGHKPF*VEGVIQLVQGA
Trigger: TGCTCCTTGGACCAGCTGGATGACACCTTCCACCCAGAATGGTTTGTGTCCCTTTTTGAGCAGAAGACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp CCTCGAACTGGATGGCGTCATCCACATCCTGCAGCATaGTGGCTGAGTAGAAGGCAGCAAAGAGGGAATATT +
Preference number: 6 (lower is better)
Translates to: PRTGWRHPHPAA*WLSRRQQRGNI
Trigger: AATATTCCCTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGGATGACGCCATCCAGTTCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TCACTTTCTGCAACAATCTCCAAGGTCATTTCCAGCTaGCCCGCCAACATCTTCTTCTCGCCCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: SLSATISKVISS*PANIFFSPSSV
Trigger: GACAGAGGAGGGCGAGAAGAAGATGTTGGCGGGCAAGCTGGAAATGACCTTGGAGATTGTTGCAGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 90 bp TCTTCATGTTCACTTTCTGCAACAATCTCCAAGGTCATTTCCAGCTaGCCCGCCAACATCTTCTTCTCGCCCTCCTCTGTCACACAAGGC +
Preference number: 6 (lower is better)
Translates to: SSCSLSATISKVISS*PANIFFSPSSVTQG
Trigger: GCCTTGTGTGACAGAGGAGGGCGAGAAGAAGATGTTGGCGGGCAAGCTGGAAATGACCTTGGAGATTGTTGCAGAAAGTGAACATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CGGCAAAGACAGAGAGCTTTCCCTCAGCAAACTGATTaGATTCCTTCTCATCCACAGAGAGCCCGAACCAGA +
Preference number: 6 (lower is better)
Translates to: RQRQRAFPQQTD*IPSHPQRARTR
Trigger: TCTGGTTCGGGCTCTCTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGGGAAAGCTCTCTGTCTTTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp CCTGGTCACTCACTGATTTCTTCCCTATGGAGATCTTaGTGTAAGGGTCACACTTGCCATTGGGGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PGHSLISSLWRS*CKGHTCHWGPW
Trigger: CCAAGGACCCCAATGGCAAGTGTGACCCTTACATCAAGATCTCCATAGGGAAGAAATCAGTGAGTGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp TCTCATCCTTGGAGAGCAGGTCATAATCGTAGAGTGTaGTCTTCAGGTCCTTCTCCAGAGGTAGAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: SHPWRAGHNRRV*SSGPSPEVECR
Trigger: CCTGCACTCTACCTCTGGAGAAGGACCTGAAGATCACACTCTACGATTATGACCTGCTCTCCAAGGATGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS GCA 72 bp GAATTTGTCATTGTCCCAGATCTGGAAGACCACACGTaGTGGGATCTTGCTCTCTGTCTTGTCGAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: EFVIVPDLEDHT*WDLALCLVESP
Trigger: TGGAGACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTCCAGATCTGGGACAATGACAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp ATGCTGTACTCCCAGCCTTGTTCATCAACAGCCCGATaGAGGTCTGTGGACCATTCTTCATCTTCCCACTTC +
Preference number: 6 (lower is better)
Translates to: MLYSQPCSSTAR*RSVDHSSSSHF
Trigger: GAAGTGGGAAGATGAAGAATGGTCCACAGACCTCAATCGGGCTGTTGATGAACAAGGCTGGGAGTACAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TCATTCCACACGGGGTTCACACTGTTCTTGATGACTTaGGTTCTCTTCTTTACCCCTGCAAACACCGCGGAG +
Preference number: 6 (lower is better)
Translates to: SFHTGFTLFLMT*VLFFTPANTAE
Trigger: CTCCGCGGTGTTTGCAGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCCCGTGTGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203803.3
ENSMUST00000204591.3
CDS TCA 72 bp TCATGGTCCTTGACCACCACGAGAAGTTCTGAGCTCTaGTCTAGAGGAATACCTTTGAGGTCCCACTCAAAG +
Preference number: 6 (lower is better)
Translates to: SWSLTTTRSSEL*SRGIPLRSHSK
Trigger: CTTTGAGTGGGACCTCAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCTCGTGGTGGTCAAGGACCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp GTTTCGGCAAAGACAGAGAGCTTTCCCTCAGCAAACTaGTTGAATTCCTTCTCATCCACAGAGAGCCCGAAC +
Preference number: 6 (lower is better)
Translates to: VSAKTESFPSAN*LNSFSSTESPN
Trigger: GTTCGGGCTCTCTGTGGATGAGAAGGAATTCAATCAGTTTGCTGAGGGAAAGCTCTCTGTCTTTGCCGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CCA 72 bp AGTGTAATACATCTTCTCAACAGGGACCCAGTGTTTTaGCTTTCGGTCTGGGGGTATGGTGATGCTGTACTC +
Preference number: 6 (lower is better)
Translates to: SVIHLLNRDPVF*LSVWGYGDAVL
Trigger: GAGTACAGCATCACCATACCCCCAGACCGAAAGCCAAAACACTGGGTCCCTGTTGAGAAGATGTATTACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS TCA 72 bp GACAGTAGAGGTCCTCTCTGGGTAACATCACTTCCATaGAGAGAGTACAGACATCAAAGTTGGGGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: DSRGPLWVTSLP*REYRHQSWGSS
Trigger: GGAAGAACCCCAACTTTGATGTCTGTACTCTCTTCATGGAAGTGATGTTACCCAGAGAGGACCTCTACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TTCTTGTTGCTGTCAAAGCCAAAGATCTGCTTGACGTaGTCCATCACAGCATCGTCCATCTGTGGTAAGTCC +
Preference number: 6 (lower is better)
Translates to: FLLLSKPKICLT*SITASSICGKS
Trigger: GGACTTACCACAGATGGACGATGCTGTGATGGACAACGTCAAGCAGATCTTTGGCTTTGACAGCAACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp AGAGAGCCCAGAAAGTCATCAAAAGAGAATTTGTCATaGTCCCAGATCTGGAAGACCACACGTGCTGGGATC +
Preference number: 6 (lower is better)
Translates to: REPRKSSKENLS*SQIWKTTRAGI
Trigger: GATCCCAGCACGTGTGGTCTTCCAGATCTGGGACAATGACAAATTCTCTTTTGATGACTTTCTGGGCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000203803.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TCAAAGCCCTCATTCCACACGGGGTTCACACTGTTCTaGATGACTTTGGTTCTCTTCTTTACCCCTGCAAAC +
Preference number: 6 (lower is better)
Translates to: SKPSFHTGFTLF*MTLVLFFTPAN
Trigger: GTTTGCAGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCCCGTGTGGAATGAGGGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203803.3
ENSMUST00000204591.3
CDS TCA 72 bp AGGCAAATCTGTGTCCTCCGTCTCATCCAAAATCCTTaGAGTTTCATGCATCTCAAAGCCAGGGATGTGATG +
Preference number: 6 (lower is better)
Translates to: RQICVLRLIQNP*SFMHLKARDVM
Trigger: CATCACATCCCTGGCTTTGAGATGCATGAAACTTCAAGGATTTTGGATGAGACGGAGGACACAGATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3
CDS CAA 72 bp TCAAAGCCCTCATTCCACACGGGGTTCACACTGTTCTaGATGACTTTGGTTCTCTTCTTTACCCCTCGAAAA +
Preference number: 6 (lower is better)
Translates to: SKPSFHTGFTLF*MTLVLFFTPRK
Trigger: TTTTCGAGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCCCGTGTGGAATGAGGGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204987.3
CDS CAA 72 bp AAGGCAAATCTGTGTCCTCCGTCTCATCCAAAATCCTaGAAGTTTCATGCATCTCAAAGCCAGGGATGTGAT +
Preference number: 6 (lower is better)
Translates to: KANLCPPSHPKS*KFHASQSQGCD
Trigger: ATCACATCCCTGGCTTTGAGATGCATGAAACTTCAAGGATTTTGGATGAGACGGAGGACACAGATTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000081904.7
ENSMUST00000089595.12
ENSMUST00000113818.8
ENSMUST00000113821.8
ENSMUST00000113823.8
ENSMUST00000153860.4
ENSMUST00000168387.8
ENSMUST00000203695.3
ENSMUST00000204354.3
ENSMUST00000204591.3
ENSMUST00000204987.3