Pregenerated sensors for DYRK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030345Ensembl transcript IDs: ENSMUST00000078521.7, ENSMUST00000171945.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGAAGGGAGCGGGACATGCCCGCCTGCCACGAGGGTCACACGATaGGTGGTAAGATGTTTGTGCTCTTGGGGGAGGAGGTGCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: AEGSGTCPPATRVTR*VVRCLCSWGRRCSA Trigger: AGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGGCGGGCATGTCCCGCTCCCTTCCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR GCA 90 bp | TGCCCGCCTGCCACGAGGGTCACACGATGGGTGGTAAGATGTTTGTaGTCTTGGGGGAGGAGGTGCTCTGCTGTTCTGCGGACATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: CPPATRVTRWVVRCL*SWGRRCSAVLRTSL Trigger: CAGAGATGTCCGCAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGGCGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR TCA 90 bp | CTTAATATCTGTGGCTTGGGCCGTGGTTTGAATTTCCTCGGCTCGTaGATCCAGGCATGCTTGAGGGCCTGCTCGGGGGTCATGCGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LNICGLGRGLNFLGS*IQACLRACSGVMRR Trigger: TCTGCGCATGACCCCCGAGCAGGCCCTCAAGCATGCCTGGATTCACGAGCCGAGGAAATTCAAACCACGGCCCAAGCCACAGATATTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR GCA 90 bp | TCTCTAATACAAATTGGTGGCGGAAGGGAGCGGGACATGCCCGCCTaGCACGAGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: SLIQIGGGRERDMPA*HEGHTMGGKMFVLL Trigger: CAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGGCGGGCATGTCCCGCTCCCTTCCGCCACCAATTTGTATTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR TCA 90 bp | TCTGACCCAGCAACAGTCTCTGACTTTCCAGAAGCTTCTGTTAGGTaGGGCAGCTGGATGGTGTCTGCTGTGTGCTCCACAGAGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SDPATVSDFPEASVR*GSWMVSAVCSTELC Trigger: GCAGAGCTCTGTGGAGCACACAGCAGACACCATCCAGCTGCCTCACCTAACAGAAGCTTCTGGAAAGTCAGAGACTGTTGCTGGGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR CCA 90 bp | GTGAGCTCAGGTAAAGACCACTCCCCCAGCCCTGCCAACCTCCTCTaGAGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTT | + |
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Preference number: 1 (lower is better) Translates to: VSSGKDHSPSPANLL*RNHANSPWGQSLIF Trigger: AAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGGAGTGGTCTTTACCTGAGCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| 3UTR GCA 90 bp | ACGATGGGTGGTAAGATGTTTGTGCTCTTGGGGGAGGAGGTGCTCTaGTGTTCTGCGGACATCTCTGACCCAGCAACAGTCTCTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: TMGGKMFVLLGEEVL*CSADISDPATVSDF Trigger: AAAGTCAGAGACTGTTGCTGGGTCAGAGATGTCCGCAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR GCA 90 bp | GCAGCTGGATGGTGTCTGCTGTGTGCTCCACAGAGCTCTGCTGTTTaGCCGAATTCTCAAGGTGCTTCTCAGCTTCGTCCTTCAATTTGT | + |
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Preference number: 1 (lower is better) Translates to: AAGWCLLCAPQSSAV*PNSQGASQLRPSIC Trigger: ACAAATTGAAGGACGAAGCTGAGAAGCACCTTGAGAATTCGGGCAAACAGCAGAGCTCTGTGGAGCACACAGCAGACACCATCCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR CCA 90 bp | CCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATaGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATGCATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: PSPANLLWRNHANSP*GQSLIFLTNLYALK Trigger: TTTTAATGCATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| 3UTR-3UTR GCA 90 bp | CCGCCTGCCACGAGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTTGGGGGATGGTGTCTGCTGTGTaGTCCACAGAGCTCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: PPATRVTRWVVRCLCSWGMVSAV*STELCC Trigger: ACAGCAGAGCTCTGTGGAGCACACAGCAGACACCAT...CCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCACGAGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTTGGGGGAGGCTGTGGCTTGGGCCGTaGTTTGAATTTCCTCGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PATRVTRWVVRCLCSWGRLWLGP*FEFPRL Trigger: GAGCCGAGGAAATTCAAACCACGGCCCAAGCCACAG...CCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCACGAGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTTGGGGGAGGCCTTTGCTGGCCTGTTaGTCTTCAGCCTTTTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: PATRVTRWVVRCLCSWGRPLLAC*SSAFSV Trigger: CACGGAAAAGGCTGAAGAGCAACAGGCCAGCAAAGG...CCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGAGCGGGACATGCCCGCCTGCCACGAGGGTCACACGATGGGTGGTAAGAGAGATCCTTGGAATCTaGGTATCTTTTTCCCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EGSGTCPPATRVTRWVVREILGI*VSFSPS Trigger: AGAGGGGGAAAAAGATACCCAGATTCCAAGGATCTC...TCTTACCACCCATCGTGTGACCCTCGTGGCAGGCGGGCATGTCCCGCTCCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTGCTCTTGGGGGAGGAGGTGCTCTGCTGTTCTGCGGACATCTCTGACCCAGGAAAGTCCAGGAAGCTaGAATCGTAGGTTTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: LCSWGRRCSAVLRTSLTQESPGS*NRRFSP Trigger: TGGTGAAAACCTACGATTCCAGCTTCCTGGACTTTC...CTGGGTCAGAGATGTCCGCAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR CCA 72 bp | AGCGGGACATGCCCGCCTGCCACGAGGGTCACACGATaGGTGGTAAGATGTTTGTGCTCTTGGGGGAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SGTCPPATRVTR*VVRCLCSWGRR Trigger: CCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGGCGGGCATGTCCCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR TCA 72 bp | TGTGGCTTGGGCCGTGGTTTGAATTTCCTCGGCTCGTaGATCCAGGCATGCTTGAGGGCCTGCTCGGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: CGLGRGLNFLGS*IQACLRACSGV Trigger: GACCCCCGAGCAGGCCCTCAAGCATGCCTGGATTCACGAGCCGAGGAAATTCAAACCACGGCCCAAGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR GCA 72 bp | GCCACGAGGGTCACACGATGGGTGGTAAGATGTTTGTaGTCTTGGGGGAGGAGGTGCTCTGCTGTTCTGCGG | + |
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Preference number: 3 (lower is better) Translates to: ATRVTRWVVRCL*SWGRRCSAVLR Trigger: CCGCAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR GCA 72 bp | TGGGTGGTAAGATGTTTGTGCTCTTGGGGGAGGAGGTaGTCTGCTGTTCTGCGGACATCTCTGACCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: WVVRCLCSWGRR*SAVLRTSLTQQ Trigger: TTGCTGGGTCAGAGATGTCCGCAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR CCA 72 bp | AGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTTaGGGGAGGAGGTGCTCTGCTGTTCTGCGGACATCT | + |
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Preference number: 3 (lower is better) Translates to: RVTRWVVRCLCS*GRRCSAVLRTS Trigger: AGATGTCCGCAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR GCA 72 bp | TGGTGTCTGCTGTGTGCTCCACAGAGCTCTGCTGTTTaGCCGAATTCTCAAGGTGCTTCTCAGCTTCGTCCT | + |
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Preference number: 3 (lower is better) Translates to: WCLLCAPQSSAV*PNSQGASQLRP Trigger: AGGACGAAGCTGAGAAGCACCTTGAGAATTCGGGCAAACAGCAGAGCTCTGTGGAGCACACAGCAGACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR TCA 72 bp | GCAACAGTCTCTGACTTTCCAGAAGCTTCTGTTAGGTaGGGCAGCTGGATGGTGTCTGCTGTGTGCTCCACA | + |
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Preference number: 3 (lower is better) Translates to: ATVSDFPEASVR*GSWMVSAVCST Trigger: TGTGGAGCACACAGCAGACACCATCCAGCTGCCTCACCTAACAGAAGCTTCTGGAAAGTCAGAGACTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR CCA 72 bp | TTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTaGCGGAAGGGAGCGGGACATGCCCGCCTGCCACGA | + |
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Preference number: 3 (lower is better) Translates to: LYNQSAFSNTNW*RKGAGHARLPR Trigger: TCGTGGCAGGCGGGCATGTCCCGCTCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078521.7 ENSMUST00000171945.8 |
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| 3UTR-3UTR CAA 90 bp | CACGAGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTTGGGGGAGGAGGTGACCATCGTGAGATCCTaGGAATCTGGGTATCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: HEGHTMGGKMFVLLGEEVTIVRS*ESGYLF Trigger: AAAAAGATACCCAGATTCCAAGGATCTCACGATGGT...CACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR GCA 72 bp | TCCACAGAGCTCTGCTGTTTGCCCGAATTCTCAAGGTaGTTCTCAGCTTCGTCCTTCAATTTGTCTGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: STELCCLPEFSR*FSASSFNLSVV Trigger: AACTACAGACAAATTGAAGGACGAAGCTGAGAAGCACCTTGAGAATTCGGGCAAACAGCAGAGCTCTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR CCA 72 bp | GCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATaGGGGCAGAGTCTGATTTTTCTTACAAACCTTTAT | + |
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Preference number: 3 (lower is better) Translates to: ANLLWRNHANSP*GQSLIFLTNLY Trigger: ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| 3UTR-3UTR CAA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATAAGCAATGTGAAGTATaGTACAATCAAAGTGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: NHANSPWGQSLIFLTNLYKQCEV*YNQSAF Trigger: GAAGGCACTTTGATTGTACAATACTTCACATTGCTT...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCCTGTGGCTTGGGCCGTaGTTTGAATTTCCTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGLWLGP*FEFPRL Trigger: GAGCCGAGGAAATTCAAACCACGGCCCAAGCCACAG...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR TCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCCTGCATGGGCCCCTTTaGTGGGACTTTGTTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGLHGPL*WDFVAN Trigger: ATTGGCAACAAAGTCCCATCAAAGGGGCCCATGCAG...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR TCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCCCAGGAGCTCAAAGGTaGTACAGAGGTGATTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGPGAQR*YRGDSG Trigger: TCCGGAATCACCTCTGTATCACCTTTGAGCTCCTGG...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR GCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCGTGGTAAGATGTTTGTaGTCTTGGGGGAGGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGVVRCL*SWGRRC Trigger: GCACCTCCTCCCCCAAGAGCACAAACATCTTACCAC...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR TCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCCTTTGTCCTTCCTTCTaGGGGCTTCCAGGATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGLCPSF*GLPGSS Trigger: TGAAGATCCTGGAAGCCCTCAGAAGGAAGGACAAAG...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR GCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCTGCTCCACAGAGCTCTaGTGTTTGCCCGAATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGCSTEL*CLPEFS Trigger: TGAGAATTCGGGCAAACAGCAGAGCTCTGTGGAGCA...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| 3UTR CAA 72 bp | CCTGCCACGAGGGTCACACGATGGGTGGTAAGATGTTaGTGCTCTTGGGGGAGGAGGTGCTCTGCTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PATRVTRWVVRC*CSWGRRCSAVL Trigger: CAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| CDS-3UTR CCA 90 bp | CCCGCCTGCCACGAGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTTGGGGGGCTCCACATGTCAATaGCCATGTTATAGGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PACHEGHTMGGKMFVLLGGSTCQ*PCYRGV Trigger: GACACCCCTATAACATGGCCATTGACATGTGGAGCC...CCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTCGTGGCAGGCGGG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| 3UTR CAA 72 bp | GAGGGTCACACGATGGGTGGTAAGATGTTTGTGCTCTaGGGGGAGGAGGTGCTCTGCTGTTCTGCGGACATC | + |
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Preference number: 4 (lower is better) Translates to: EGHTMGGKMFVL*GEEVLCCSADI Trigger: GATGTCCGCAGAACAGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTTACCACCCATCGTGTGACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCCTTGCTGAACTTCTCTaGAACCACGTTGAGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGLAELL*NHVELL Trigger: AAGAAGCTCAACGTGGTTCCAGAGAAGTTCAGCAAG...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCACTTTAACAGTGACTTaGCCCCTCTGGTATAGCACA | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGTLTVT*PLWYST Trigger: TGTGCTATACCAGAGGGGCCAAGTCACTGTTAAAGT...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCGAAAGTCCAGGAAGCTaGAATCGTAGGTTTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGESPGS*NRRFSP Trigger: TGGTGAAAACCTACGATTCCAGCTTCCTGGACTTTC...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR TCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCGAACTATGGACAGATTaGAGCCATGAAAGCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGELWTD*SHESCC Trigger: ACAACAGCTTTCATGGCTTCAATCTGTCCATAGTTC...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCATGTGGACCACATTGTaGTTGTTGTCTTTGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGMWTTL*LLSLSF Trigger: GAAGGACAAAGACAACAACCACAATGTGGTCCACAT...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| 3UTR CAA 72 bp | ATGGTGTCTGCTGTGTGCTCCACAGAGCTCTGCTGTTaGCCCGAATTCTCAAGGTGCTTCTCAGCTTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: MVSAVCSTELCC*PEFSRCFSASS Trigger: GGACGAAGCTGAGAAGCACCTTGAGAATTCGGGCAAACAGCAGAGCTCTGTGGAGCACACAGCAGACACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| CDS-3UTR CCA 90 bp | TGGATGGTGTCTGCTGTGTGCTCCACAGAGCTCTGCTGTTTGCCCGAATTCTCATCCCAGAATCACCTCTaGGGATCGGTAGAAACGACT | + |
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Preference number: 4 (lower is better) Translates to: WMVSAVCSTELCCLPEFSSQNHL*GSVETT Trigger: AGTCGTTTCTACCGATCCCCAGAGGTGATTCTGGGA...TGAGAATTCGGGCAAACAGCAGAGCTCTGTGGAGCACACAGCAGACACCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCTTTTGGGAAGACCTTTaGAATCAAAGAATACCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PPALPTSSGGIMLTHHGGFWEDL*NQRIPV Trigger: GACAGGTATTCTTTGATTCCAAAGGTCTTCCCAAAA...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTGGTGAAGTGGGCAGGTaGCAGGCCCAGCACCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RNHANSPWGQSLIFLTNLGEVGR*QAQHLH Trigger: ATGGAGGTGCTGGGCCTGCCACCTGCCCACTTCACC...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGACTCCTGGAGGCTGTCTaGGTGAAGTGGGCAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGLLEAV*VKWAGG Trigger: GCCACCTGCCCACTTCACCCAGACAGCCTCCAGGAG...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR GCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATGCATGCTTGAGGGCCTaGTCGGGGGTCATGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYACLRA*SGVMRR Trigger: TCTGCGCATGACCCCCGAGCAGGCCCTCAAGCATGC...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR TCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAGGCCCAGCACCTCCATaGTGCAAGCCAGCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGGPAPP*CKPAAP Trigger: TGGAGCAGCTGGCTTGCATCATGGAGGTGCTGGGCC...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR TCA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTGATGGCTTCTGGAGGTaGCCCAAAGGCTTACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNHANSPWGQSLIFLTNLDGFWR*PKGLLS Trigger: TGAGAGTAAGCCTTTGGGTCACCTCCAGAAGCCATC...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR GCA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTCCTTTGCTGGCCTGTTaGTCTTCAGCCTTTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNHANSPWGQSLIFLTNLPLLAC*SSAFSV Trigger: CACGGAAAAGGCTGAAGAGCAACAGGCCAGCAAAGG...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR GCA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTATGGTGTCTGCTGTGTaGTCCACAGAGCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNHANSPWGQSLIFLTNLMVSAV*STELCC Trigger: ACAGCAGAGCTCTGTGGAGCACACAGCAGACACCAT...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTAGATGTTTGTGCTCTTaGGGGAGGAGGTGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNHANSPWGQSLIFLTNLRCLCS*GRRCSA Trigger: AGCAGAGCACCTCCTCCCCCAAGAGCACAAACATCT...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATCAGGAACCACAGCTCTaGGTAGCCCAGGATTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYQEPQL*VAQDFA Trigger: AGCGAAATCCTGGGCTACTCAGAGCTGTGGTTCCTG...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR GCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATCAGCTGGATGGTGTCTaGTGTGTGCTCCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYQLDGV*CVLHRA Trigger: AGCTCTGTGGAGCACACAGCAGACACCATCCAGCTG...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR GCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAGGGGAGGAGGTGCTCTaGTGTTCTGCGGACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGGEEVL*CSADIS Trigger: AGAGATGTCCGCAGAACAGCAGAGCACCTCCTCCCC...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAGTTCTGGGTGTGGCTTaGTGTCTTGGGCTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGVLGVA*CLGLWC Trigger: ACACCAAAGCCCAAGACACCAAGCCACACCCAGAAC...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAGGCTCCACATGTCAATaGCCATGTTATAGGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGGSTCQ*PCYRGV Trigger: GACACCCCTATAACATGGCCATTGACATGTGGAGCC...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078521.7 ENSMUST00000171945.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGACTTGTTTGTATCCATTaGAGTCTCTGTCCGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGLVCIH*SLCPGE Trigger: CTCACCCGGACAGAGACTTCAATGGATACAAACAAG...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGACAACCTTCACAGAGGTaGAACTCTGCTTCTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGQPSQR*NSASSL Trigger: CAAGGAAGAAGCAGAGTTTCACCTCTGTGAAGGTTG...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGATGTGATCCAAGCACTTaGCCACCTGTCCAAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGCDPST*PPVQRT Trigger: GGTCCTTTGGACAGGTGGCCAAGTGCTTGGATCACA...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATTCCCAGAATCACCTCTaGGGATCGGTAGAAACGACT | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYSQNHL*GSVETT Trigger: AGTCGTTTCTACCGATCCCCAGAGGTGATTCTGGGA...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATTTTTCACCACCATCGTaGGATCCTTGGAATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYFSPPS*DPWNLG Trigger: ACCCAGATTCCAAGGATCTCACGATGGTGGTGAAAA...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGACCCAGCAACAGTCTCTaGCTTTCCAGAAGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGPSNSL*LSRSFC Trigger: ACAGAAGCTTCTGGAAAGTCAGAGACTGTTGCTGGG...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR GCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGACCCGAATTCTCAAGGTaGTTCTCAGCTTCGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGPEFSR*FSASSF Trigger: GAAGGACGAAGCTGAGAAGCACCTTGAGAATTCGGG...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATTCAGCTTCTTGTTCTTaGAGGATGGCTTCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYSASCS*RMASGG Trigger: ACCTCCAGAAGCCATCCTCCAAGAACAAGAAGCTGA...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTGTATTTCTGAAGTCTTaGGTTCAGAGGATAGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RNHANSPWGQSLIFLTNLVFLKS*VQRIAL Trigger: AAGTGCTATCCTCTGAACTCAAGACTTCAGAAATAC...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAGACAGATTGAAGCCATaGAAGCTGTTGTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGDRLKP*KLLFFI Trigger: GATGAAGAACAACAGCTTTCATGGCTTCAATCTGTC...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR GCA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTACTCTGCTTCTTCCTTaGTTTCAAAATTGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNHANSPWGQSLIFLTNLTLLLP*FQNWEG Trigger: ACCTTCCCAATTTTGAAAGCAAGGAAGAAGCAGAGT...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGACCTTGCTTTCAAAATTaGGAAGGTTGTCAAACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGPCFQN*EGCQTA Trigger: CGCAGTTTGACAACCTTCCCAATTTTGAAAGCAAGG...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATGAACGCCGTGTTACTTaGAATCTTTTGTGGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYERRVT*NLLWTS Trigger: CGATGTCCACAAAAGATTCCAAGTAACACGGCGTTC...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAGTTGAAAGGTATTTCTaGAGTCTTGAGTTCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGVERYF*SLEFRG Trigger: TCCTCTGAACTCAAGACTTCAGAAATACCTTTCAAC...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR GCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATGTAAGAGGGACTTTGTaGTTCTTTTGTAGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYVRGTL*FFCSSG Trigger: CCCAGAACTACAAAAGAAGCACAAAGTCCCTCTTAC...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAGAGATCCTTGGAATCTaGGTATCTTTTTCCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGEILGI*VSFSPS Trigger: AGAGGGGGAAAAAGATACCCAGATTCCAAGGATCTC...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR GCA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATACAGAGGTGAAACTCTaGTTCTTCCTTGCTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NHANSPWGQSLIFLTNLYTEVKL*FFLAFK Trigger: TTTGAAAGCAAGGAAGAAGCAGAGTTTCACCTCTGT...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAACTTGGAATCTTTTGTaGACATCGGTTCACTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGTWNLL*TSVHSQ Trigger: CTGAGAGTGAACCGATGTCCACAAAAGATTCCAAGT...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAACTTTGTTGCCAATCTaGGGGAAGTTAACTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGTLLPI*GKLTVF Trigger: GAACACAGTTAACTTCCCCCAGATTGGCAACAAAGT...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAAGAAATCCTTCATGTaGACCACATTGTGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGKKSFM*TTLWLL Trigger: CAACAACCACAATGTGGTCCACATGAAGGATTTCTT...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR TCA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAGTGTTCATAACAGCTTaGCCCAAAGTCAATAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGVFITA*PKVNNF Trigger: AAAGTTATTGACTTTGGGTCAAGCTGTTATGAACAC...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCTGGGTGGTAAGATGTTaGTGCTCTTGGGGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPALPTSSGGIMLTHHGGWVVRC*CSWGRR Trigger: CCTCCTCCCCCAAGAGCACAAACATCTTACCACCCA...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS CCA 90 bp | TTGGAATCAAAGAATACCTGTCTCCTGGAGGCTGTCTGGGTGAAGTaGGCAGGTGGCAGGCCCAGCACCTCCATGATGCAAGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LESKNTCLLEAVWVK*AGGRPSTSMMQASC Trigger: GCAGCTGGCTTGCATCATGGAGGTGCTGGGCCTGCCACCTGCCCACTTCACCCAGACAGCCTCCAGGAGACAGGTATTCTTTGATTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCACCACATTGTGGTTGTaGTCTTTGTCCTTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPALPTSSGGIMLTHHGGTTLWL*SLSFLL Trigger: CAGAAGGAAGGACAAAGACAACAACCACAATGTGGT...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCTTCATGTGGACCACATaGTGGTTGTTGTCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPALPTSSGGIMLTHHGGFMWTT*WLLSLS Trigger: GGACAAAGACAACAACCACAATGTGGTCCACATGAA...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCATCAACTCATACAGGTaGATTCCCAGGAGCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPALPTSSGGIMLTHHGGINSYR*IPRSSK Trigger: CTTTGAGCTCCTGGGAATCAACCTGTATGAGTTGAT...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCTCAAACTGCGTTTCCTaGCCTTGTTTGTATCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PPALPTSSGGIMLTHHGGSNCVS*PCLYPL Trigger: CAATGGATACAAACAAGGCAAGGAAACGCAGTTTGA...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCGGTATTTCTGAAGTCTaGAGTTCAGAGGATAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PPALPTSSGGIMLTHHGGGISEV*SSEDST Trigger: AGTGCTATCCTCTGAACTCAAGACTTCAGAAATACC...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGCCCTGCCAACCTCCTCTGGAGGAATCATGCTAACTCACCATGGGGGCTTGGTGTCTTGGGCTTaGGTGTTAATGTTGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPALPTSSGGIMLTHHGGLVSWA*VLMLKG Trigger: ACCTTTCAACATTAACACCAAAGCCCAAGACACCAA...GCCCCCATGGTGAGTTAGCATGATTCCTCCAGAGGAGGTTGGCAGGGCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS TCA 90 bp | TGGGAAGGTTGTCAAACTGCGTTTCCTTGCCTTGTTTGTATCCATTaGAGTCTCTGTCCGGGTGAGGGCAGGAAGTCGGAGGAGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WEGCQTAFPCLVCIH*SLCPGEGRKSEELH Trigger: ATGCAGCTCCTCCGACTTCCTGCCCTCACCCGGACAGAGACTTCAATGGATACAAACAAGGCAAGGAAACGCAGTTTGACAACCTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS TCA 90 bp | AACCACGTTGAGCTTCTTGGCTTCAAGGCCCAGGAACCACAGCTCTaGGTAGCCCAGGATTTCGCTTTGCTCATAAGGGGACAGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: NHVELLGFKAQEPQL*VAQDFALLIRGQLI Trigger: AATCAGCTGTCCCCTTATGAGCAAAGCGAAATCCTGGGCTACTCAGAGCTGTGGTTCCTGGGCCTTGAAGCCAAGAAGCTCAACGTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS TCA 90 bp | CGGTTCACTCTCAGCTTCTTGTTCTTGGAGGATGGCTTCTGGAGGTaGCCCAAAGGCTTACTCTCAACCTTCACAGAGGTGAAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFTLSFLFLEDGFWR*PKGLLSTFTEVKLC Trigger: GCAGAGTTTCACCTCTGTGAAGGTTGAGAGTAAGCCTTTGGGTCACCTCCAGAAGCCATCCTCCAAGAACAAGAAGCTGAGAGTGAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS TCA 90 bp | CCTTCATGTGGACCACATTGTGGTTGTTGTCTTTGTCCTTCCTTCTaGGGGCTTCCAGGATCTTCAGCTCCACCAGAGCCTGATGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSCGPHCGCCLCPSF*GLPGSSAPPEPDGE Trigger: TTCACCATCAGGCTCTGGTGGAGCTGAAGATCCTGGAAGCCCTCAGAAGGAAGGACAAAGACAACAACCACAATGTGGTCCACATGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS CCA 90 bp | ATAGGAACCGTGCTCATCATCAAAGCTTGTCTTGCTGAACTTCTCTaGAACCACGTTGAGCTTCTTGGCTTCAAGGCCCAGGAACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: IGTVLIIKACLAELL*NHVELLGFKAQEPQ Trigger: CTGTGGTTCCTGGGCCTTGAAGCCAAGAAGCTCAACGTGGTTCCAGAGAAGTTCAGCAAGACAAGCTTTGATGATGAGCACGGTTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS CCA 90 bp | CTTTTGTGGACATCGGTTCACTCTCAGCTTCTTGTTCTTGGAGGATaGCTTCTGGAGGTGACCCAAAGGCTTACTCTCAACCTTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLWTSVHSQLLVLGG*LLEVTQRLTLNLHR Trigger: TCTGTGAAGGTTGAGAGTAAGCCTTTGGGTCACCTCCAGAAGCCATCCTCCAAGAACAAGAAGCTGAGAGTGAACCGATGTCCACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTGCCTTTGCTGGCCTGTaGCTCTTCAGCCTTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RNHANSPWGQSLIFLTNLAFAGL*LFSLFR Trigger: ACGGAAAAGGCTGAAGAGCAACAGGCCAGCAAAGGC...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
||
| CDS-3UTR CAA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAGCCCAGGATTTCGCTTaGCTCATAAGGGGACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGAQDFA*LIRGQL Trigger: CAGCTGTCCCCTTATGAGCAAAGCGAAATCCTGGGC...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAAAGATGTTTGTGCTCTaGGGGGAGGAGGTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGKMFVL*GEEVLC Trigger: GCAGAGCACCTCCTCCCCCAAGAGCACAAACATCTT...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 90 bp | TTCTTAAAGAACTTTAGGGCCTCTGCTACTGTAAGAGGGACTTTGTaGTTCTTTTGTAGTTCTGGGTGTGGCTTGGTGTCTTGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLKNFRASATVRGTL*FFCSSGCGLVSWAL Trigger: CAAAGCCCAAGACACCAAGCCACACCCAGAACTACAAAAGAAGCACAAAGTCCCTCTTACAGTAGCAGAGGCCCTAAAGTTCTTTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAACTGCATGGGCCCCTTaGATGGGACTTTGTTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGTAWAP*MGLCCQ Trigger: TTGGCAACAAAGTCCCATCAAAGGGGCCCATGCAGT...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 90 bp | AACTCTGCTTCTTCCTTGCTTTCAAAATTGGGAAGGTTGTCAAACTaGGTTTCCTTGCCTTGTTTGTATCCATTGAAGTCTCTGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSASSLLSKLGRLSN*VSLPCLYPLKSLSG Trigger: CCCGGACAGAGACTTCAATGGATACAAACAAGGCAAGGAAACGCAGTTTGACAACCTTCCCAATTTTGAAAGCAAGGAAGAAGCAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 90 bp | AGGCTTACTCTCAACCTTCACAGAGGTGAAACTCTGCTTCTTCCTTaGTTTCAAAATTGGGAAGGTTGTCAAACTGCGTTTCCTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLTLNLHRGETLLLP*FQNWEGCQTAFPCL Trigger: AAGGCAAGGAAACGCAGTTTGACAACCTTCCCAATTTTGAAAGCAAGGAAGAAGCAGAGTTTCACCTCTGTGAAGGTTGAGAGTAAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS TCA 90 bp | AAAATGGAAAAGGTGAAGCGCCGAACTATGGACAGATTGAAGCCATaGAAGCTGTTGTTCTTCATCAACTCATACAGGTTGATTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMEKVKRRTMDRLKP*KLLFFINSYRLIPR Trigger: CCTGGGAATCAACCTGTATGAGTTGATGAAGAACAACAGCTTTCATGGCTTCAATCTGTCCATAGTTCGGCGCTTCACCTTTTCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 90 bp | GGGACTTTGTGCTTCTTTTGTAGTTCTGGGTGTGGCTTGGTGTCTTaGGCTTTGGTGTTAATGTTGAAAGGTATTTCTGAAGTCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTLCFFCSSGCGLVS*ALVLMLKGISEVLS Trigger: ACTCAAGACTTCAGAAATACCTTTCAACATTAACACCAAAGCCCAAGACACCAAGCCACACCCAGAACTACAAAAGAAGCACAAAGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGACTCAGCTTCTTGTTCTaGGAGGATGGCTTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGLSFLF*EDGFWR Trigger: CCTCCAGAAGCCATCCTCCAAGAACAAGAAGCTGAG...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATTGTTCCTCTTCCCCTTaGTGTCCACAAAAGGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: NHANSPWGQSLIFLTNLYCSSSP*CPQKGT Trigger: CGTTCCCTTTTGTGGACACAAAGGGGAAGAGGAACA...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAGTGTGGCTTGGTGTCTaGGGCTTTGGTGTTAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGVWLGV*GFGVNV Trigger: AACATTAACACCAAAGCCCAAGACACCAAGCCACAC...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATTTCTCTGGAACCACGTaGAGCTTCTTGGCTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NHANSPWGQSLIFLTNLYFSGTT*SFLASR Trigger: CCTTGAAGCCAAGAAGCTCAACGTGGTTCCAGAGAA...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 90 bp | AACCTTCACAGAGGTGAAACTCTGCTTCTTCCTTGCTTTCAAAATTaGGAAGGTTGTCAAACTGCGTTTCCTTGCCTTGTTTGTATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NLHRGETLLLPCFQN*EGCQTAFPCLVCIH Trigger: ATGGATACAAACAAGGCAAGGAAACGCAGTTTGACAACCTTCCCAATTTTGAAAGCAAGGAAGAAGCAGAGTTTCACCTCTGTGAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATTTGTGGTTGTTGTCTTaGTCCTTCCTTCTGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NHANSPWGQSLIFLTNLYLWLLS*SFLLRA Trigger: AGCCCTCAGAAGGAAGGACAAAGACAACAACCACAA...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGATGGACCACATTGTGGTaGTTGTCTTTGTCCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGWTTLW*LSLSFL Trigger: AAGGAAGGACAAAGACAACAACCACAATGTGGTCCA...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGAGTTTCCTTGCCTTGTTaGTATCCATTGAAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGVSLPC*YPLKSL Trigger: CAGAGACTTCAATGGATACAAACAAGGCAAGGAAAC...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGATTCACTCTCAGCTTCTaGTTCTTGGAGGATGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGFTLSF*FLEDGF Trigger: GAAGCCATCCTCCAAGAACAAGAAGCTGAGAGTGAA...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATTCAAAATTGGGAAGGTaGTCAAACTGCGTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NHANSPWGQSLIFLTNLYSKLGR*SNCVSL Trigger: CAAGGAAACGCAGTTTGACAACCTTCCCAATTTTGA...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AGGAATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTTTTTGGGAAGACCTTaGGAATCAAAGAATACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RNHANSPWGQSLIFLTNLFLGRP*ESKNTC Trigger: ACAGGTATTCTTTGATTCCAAAGGTCTTCCCAAAAA...AAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATTCCT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATCATGCTAACTCACCATGGGGGCAGAGTCTGATTTTTCTTACAAACCTTTATACCATCGTGAGATCCTaGGAATCTGGGTATCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NHANSPWGQSLIFLTNLYTIVRS*ESGYLF Trigger: AAAAAGATACCCAGATTCCAAGGATCTCACGATGGT...ATAAAGGTTTGTAAGAAAAATCAGACTCTGCCCCCATGGTGAGTTAGCATGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | AATGTGAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGATCCTTGCTTTCAAAATaGGGAAGGTTGTCAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVKYCTIKVPSLIQIGGGSLLSK*GRLSNC Trigger: GCAGTTTGACAACCTTCCCAATTTTGAAAGCAAGGA...TCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS-3UTR CAA 90 bp | GAAGTATTGTACAATCAAAGTGCCTTCTCTAATACAAATTGGTGGCGGAAGGGATTTCCCCCTCTGTTGTaGTTTATATTTTTGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EVLYNQSAFSNTNWWRKGFPPLL*FIFLGR Trigger: TCTTCCCAAAAATATAAACAACAACAGAGGGGGAAA...TCCCTTCCGCCACCAATTTGTATTAGAGAAGGCACTTTGATTGTACAATACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 72 bp | GGTGGCAGGCCCAGCACCTCCATGATGCAAGCCAGCTaGTCCACCTCGTTCTCCCCAGGGAACAGTGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GGRPSTSMMQAS*STSFSPGNSGY Trigger: ATACCCACTGTTCCCTGGGGAGAACGAGGTGGAGCAGCTGGCTTGCATCATGGAGGTGCTGGGCCTGCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 72 bp | GGGAAGACCTTTGGAATCTCCATGATGCAAGCCAGCTaGTCCACCTCGTTCTCCCCAGGGAACAGTGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GKTFGISMMQAS*STSFSPGNSGY Trigger: ATACCCACTGTTCCCTGGGGAGAACGAGGTGGAGCAGCTGGCTTGCATCATGGAGATTCCAAAGGTCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171945.8 |
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| CDS TCA 72 bp | CTCAGCTTCTTGTTCTTGGAGGATGGCTTCTGGAGGTaGCCCAAAGGCTTACTCTCAACCTTCACAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSFLFLEDGFWR*PKGLLSTFTEV Trigger: CACCTCTGTGAAGGTTGAGAGTAAGCCTTTGGGTCACCTCCAGAAGCCATCCTCCAAGAACAAGAAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | ACATCGGTTCACTCTCAGCTTCTTGTTCTTGGAGGATaGCTTCTGGAGGTGACCCAAAGGCTTACTCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSVHSQLLVLGG*LLEVTQRLTLN Trigger: GTTGAGAGTAAGCCTTTGGGTCACCTCCAGAAGCCATCCTCCAAGAACAAGAAGCTGAGAGTGAACCGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | GTGCTCATCATCAAAGCTTGTCTTGCTGAACTTCTCTaGAACCACGTTGAGCTTCTTGGCTTCAAGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLIIKACLAELL*NHVELLGFKAQ Trigger: CTGGGCCTTGAAGCCAAGAAGCTCAACGTGGTTCCAGAGAAGTTCAGCAAGACAAGCTTTGATGATGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 90 bp | CTTGCTTTCAAAATTGGGAAGGTTGTCAAACTGCGTTTCCTTGCCTaGTTTGTATCCATTGAAGTCTCTGTCCGGGTGAGGGCAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LAFKIGKVVKLRFLA*FVSIEVSVRVRAGS Trigger: ACTTCCTGCCCTCACCCGGACAGAGACTTCAATGGATACAAACAAGGCAAGGAAACGCAGTTTGACAACCTTCCCAATTTTGAAAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 72 bp | AACTTTAGGGCCTCTGCTACTGTAAGAGGGACTTTGTaGTTCTTTTGTAGTTCTGGGTGTGGCTTGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NFRASATVRGTL*FFCSSGCGLVS Trigger: AGACACCAAGCCACACCCAGAACTACAAAAGAAGCACAAAGTCCCTCTTACAGTAGCAGAGGCCCTAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | AATGGCCATGTTATAGGGGTGTCCCAGAATCACCTCTaGGGATCGGTAGAAACGACTTTGGATGTACGTATA | + |
|
Preference number: 6 (lower is better) Translates to: NGHVIGVSQNHL*GSVETTLDVRI Trigger: TATACGTACATCCAAAGTCGTTTCTACCGATCCCCAGAGGTGATTCTGGGACACCCCTATAACATGGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 72 bp | AAATCCTTCATGTGGACCACATTGTGGTTGTTGTCTTaGTCCTTCCTTCTGAGGGCTTCCAGGATCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KSFMWTTLWLLS*SFLLRASRIFS Trigger: GCTGAAGATCCTGGAAGCCCTCAGAAGGAAGGACAAAGACAACAACCACAATGTGGTCCACATGAAGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | CACAAAAGGGAACGCCGTGTTACTTGGAATCTTTTGTaGACATCGGTTCACTCTCAGCTTCTTGTTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HKRERRVTWNLL*TSVHSQLLVLG Trigger: TCCAAGAACAAGAAGCTGAGAGTGAACCGATGTCCACAAAAGATTCCAAGTAACACGGCGTTCCCTTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 72 bp | AAAATTGGGAAGGTTGTCAAACTGCGTTTCCTTGCCTaGTTTGTATCCATTGAAGTCTCTGTCCGGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KIGKVVKLRFLA*FVSIEVSVRVR Trigger: CCTCACCCGGACAGAGACTTCAATGGATACAAACAAGGCAAGGAAACGCAGTTTGACAACCTTCCCAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 72 bp | GGGACTTTGTGCTTCTTTTGTAGTTCTGGGTGTGGCTaGGTGTCTTGGGCTTTGGTGTTAATGTTGAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GTLCFFCSSGCG*VSWALVLMLKG Trigger: ACCTTTCAACATTAACACCAAAGCCCAAGACACCAAGCCACACCCAGAACTACAAAAGAAGCACAAAGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | GCACTTGATTATGAATTTGATTTTCCTGATACTGCATaGGCCCCTTTGATGGGACTTTGTTGCCAATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALDYEFDFPDTA*APLMGLCCQSG Trigger: CCCAGATTGGCAACAAAGTCCCATCAAAGGGGCCCATGCAGTATCAGGAAAATCAAATTCATAATCAAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | CCAAAGTCAATAACTTTAACAGTGACTTGGCCCCTCTaGTATAGCACAATATTTTCCGGCTTGAGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PKSITLTVTWPL*YSTIFSGLRSQ Trigger: CTGTGACCTCAAGCCGGAAAATATTGTGCTATACCAGAGGGGCCAAGTCACTGTTAAAGTTATTGACTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | CAGCTTGACCCAAAGTCAATAACTTTAACAGTGACTTaGCCCCTCTGGTATAGCACAATATTTTCCGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLDPKSITLTVT*PLWYSTIFSGL Trigger: CAAGCCGGAAAATATTGTGCTATACCAGAGGGGCCAAGTCACTGTTAAAGTTATTGACTTTGGGTCAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 72 bp | TCCCAGAATCACCTCTGGGGATCGGTAGAAACGACTTaGGATGTACGTATACACTTTCTGGTGTTCATAACA | + |
|
Preference number: 6 (lower is better) Translates to: SQNHLWGSVETT*DVRIHFLVFIT Trigger: TGTTATGAACACCAGAAAGTGTATACGTACATCCAAAGTCGTTTCTACCGATCCCCAGAGGTGATTCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 72 bp | CTCAACCTTCACAGAGGTGAAACTCTGCTTCTTCCTTaGTTTCAAAATTGGGAAGGTTGTCAAACTGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LNLHRGETLLLP*FQNWEGCQTAF Trigger: AAACGCAGTTTGACAACCTTCCCAATTTTGAAAGCAAGGAAGAAGCAGAGTTTCACCTCTGTGAAGGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | CCCCTCTGTTGTTGTTTATATTTTTGGGAAGACCTTTaGAATCAAAGAATACCTGTCTCCTGGAGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLCCCLYFWEDL*NQRIPVSWRLS Trigger: AGACAGCCTCCAGGAGACAGGTATTCTTTGATTCCAAAGGTCTTCCCAAAAATATAAACAACAACAGAGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 90 bp | TTGTGCTTCTTTTGTAGTTCTGGGTGTGGCTTGGTGTCTTGGGCTTaGGTGTTAATGTTGAAAGGTATTTCTGAAGTCTTGAGTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCFFCSSGCGLVSWA*VLMLKGISEVLSSE Trigger: CTCTGAACTCAAGACTTCAGAAATACCTTTCAACATTAACACCAAAGCCCAAGACACCAAGCCACACCCAGAACTACAAAAGAAGCACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 90 bp | ACTGTAAGAGGGACTTTGTGCTTCTTTTGTAGTTCTGGGTGTGGCTaGGTGTCTTGGGCTTTGGTGTTAATGTTGAAAGGTATTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVRGTLCFFCSSGCG*VSWALVLMLKGISE Trigger: TTCAGAAATACCTTTCAACATTAACACCAAAGCCCAAGACACCAAGCCACACCCAGAACTACAAAAGAAGCACAAAGTCCCTCTTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CCA 72 bp | TGCTTCTTTTGTAGTTCTGGGTGTGGCTTGGTGTCTTaGGCTTTGGTGTTAATGTTGAAAGGTATTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CFFCSSGCGLVS*ALVLMLKGISE Trigger: TTCAGAAATACCTTTCAACATTAACACCAAAGCCCAAGACACCAAGCCACACCCAGAACTACAAAAGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS CAA 72 bp | TTTTGTAGTTCTGGGTGTGGCTTGGTGTCTTGGGCTTaGGTGTTAATGTTGAAAGGTATTTCTGAAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FCSSGCGLVSWA*VLMLKGISEVL Trigger: CAAGACTTCAGAAATACCTTTCAACATTAACACCAAAGCCCAAGACACCAAGCCACACCCAGAACTACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS TCA 72 bp | GATGTACGTATACACTTTCTGGTGTTCATAACAGCTTaGCCCAAAGTCAATAACTTTAACAGTGACTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DVRIHFLVFITA*PKVNNFNSDLA Trigger: GGCCAAGTCACTGTTAAAGTTATTGACTTTGGGTCAAGCTGTTATGAACACCAGAAAGTGTATACGTACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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| CDS GCA 72 bp | TCTTCCTTGCTTTCAAAATTGGGAAGGTTGTCAAACTaGGTTTCCTTGCCTTGTTTGTATCCATTGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLLSKLGRLSN*VSLPCLYPLKS Trigger: AGACTTCAATGGATACAAACAAGGCAAGGAAACGCAGTTTGACAACCTTCCCAATTTTGAAAGCAAGGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078521.7 |
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