Pregenerated sensors for DYRK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016526Ensembl transcript IDs: ENSMUST00000016670.9, ENSMUST00000189756.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGCTGGAGAGAGATAGATAGCTTAGTGGTTAAGAGCTCTGAATaGCCTTCCAGGGGACACAGGTTCAATTCCCAGCATCCACATGGG | + |
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Preference number: 1 (lower is better) Translates to: RSWREIDSLVVKSSE*PSRGHRFNSQHPHG Trigger: CCCATGTGGATGCTGGGAATTGAACCTGTGTCCCCTGGAAGGGCATTCAGAGCTCTTAACCACTAAGCTATCTATCTCTCTCCAGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR GCA 90 bp | AAACAGCTACCTGTACTCTTTCCATCTAGAATGAGCCCACAGAATTaGTTGCTGGGGTTAAGACTTCTAGCTTTGCCTTACAGCCATGCC | + |
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Preference number: 1 (lower is better) Translates to: KQLPVLFPSRMSPQN*LLGLRLLALPYSHA Trigger: GGCATGGCTGTAAGGCAAAGCTAGAAGTCTTAACCCCAGCAAGCAATTCTGTGGGCTCATTCTAGATGGAAAGAGTACAGGTAGCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR CCA 90 bp | ACAAGCAGTCAGCTTGTGCTTTTAGAATATCTTCTATCGAGGAGCTaGAGAGAGATAGATAGCTTAGTGGTTAAGAGCTCTGAATGCCCT | + |
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Preference number: 1 (lower is better) Translates to: TSSQLVLLEYLLSRS*REIDSLVVKSSECP Trigger: AGGGCATTCAGAGCTCTTAACCACTAAGCTATCTATCTCTCTCCAGCTCCTCGATAGAAGATATTCTAAAAGCACAAGCTGACTGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR TCA 90 bp | CACTGCGGCCACGGCTTAGGAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCAAACATATCCATCAGTaGATGGGCTTCAATTATTCC | + |
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Preference number: 2 (lower is better) Translates to: HCGHGLGAALPPGAGERAKHIHQ*MGFNYS Trigger: GGAATAATTGAAGCCCATTCACTGATGGATATGTTT...GGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTCCTAAGCCGTGGCCGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTATCATATGTTAAGAGCTCTGAATaGCCTTCCAGGGGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: GFNLLAEQHCCPKPAVSYVKSSE*PSRGHR Trigger: CCTGTGTCCCCTGGAAGGGCATTCAGAGCTCTTAAC...ATATGATACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTATCATATGTTAAAAGAAGAGAATaGGATCAGGGCCCCACGGTC | + |
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Preference number: 2 (lower is better) Translates to: GFNLLAEQHCCPKPAVSYVKRRE*DQGPTV Trigger: GACCGTGGGGCCCTGATCTCATTCTCTTCTTTTAAC...ATATGATACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR TCA 90 bp | ACGATGGAGTATTCAGTGAAGCAAAGCCATTCACTTGATGGCCAGCAGTTAAAATCTTTCCATCTAGAATaGGCCCACAGAATTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: TMEYSVKQSHSLDGQQLKSFHLE*AHRIAC Trigger: GCAAGCAATTCTGTGGGCTCATTCTAGATGGAAAGA...TTTTAACTGCTGGCCATCAAGTGAATGGCTTTGCTTCACTGAATACTCCATCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATAAGCCATAAAATACTATaGACTCAACACGAAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: QGYLVKCKICKPLSTQAISHKIL*TQHENQ Trigger: CTGGTTTTCGTGTTGAGTTCATAGTATTTTATGGCT...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTCGAGTACCTCTGATGAGAATGAAAACAATGCACTGACCTATGAAAAAGTCATATCCATCAGTGAATaGGCTTCAATTATTCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: SSSTSDENENNALTYEKVISISE*ASIIPF Trigger: AAACGGAATAATTGAAGCCCATTCACTGATGGATAT...GACTTTTTCATAGGTCAGTGCATTGTTTTCATTCTCATCAGAGGTACTCGAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR CCA 72 bp | ACACTGCGGCCACGGCTTAGGAGCAGCACTTCCTCCTaGTGCTGGGGAGCGAGCCTTTATTTAACACACGGG | + |
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Preference number: 3 (lower is better) Translates to: TLRPRLRSSTSS*CWGASLYLTHG Trigger: CCCGTGTGTTAAATAAAGGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTCCTAAGCCGTGGCCGCAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR GCA 72 bp | GCTGGGGTTAAGACTTCTAGCTTTGCCTTACAGCCATaGCTCCCACACCCCAGTACCCTCCGGAATAGATGC | + |
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Preference number: 3 (lower is better) Translates to: AGVKTSSFALQP*LPHPSTLRNRC Trigger: GCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGCTAGAAGTCTTAACCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR GCA 72 bp | AGAGAGATAGATAGCTTAGTGGTTAAGAGCTCTGAATaGCCTTCCAGGGGACACAGGTTCAATTCCCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: REIDSLVVKSSE*PSRGHRFNSQH Trigger: ATGCTGGGAATTGAACCTGTGTCCCCTGGAAGGGCATTCAGAGCTCTTAACCACTAAGCTATCTATCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR CAA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATACATGGGGGTTCACAATaGTTTGTAACTCCCAAGACT | + |
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Preference number: 3 (lower is better) Translates to: QGYLVKCKICKPLSTQAIHGGSQ*FVTPKT Trigger: AGTCTTGGGAGTTACAAACAATTGTGAACCCCCATG...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR CCA 72 bp | CAGCTTGTGCTTTTAGAATATCTTCTATCGAGGAGCTaGAGAGAGATAGATAGCTTAGTGGTTAAGAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QLVLLEYLLSRS*REIDSLVVKSS Trigger: AGAGCTCTTAACCACTAAGCTATCTATCTCTCTCCAGCTCCTCGATAGAAGATATTCTAAAAGCACAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR-3UTR CAA 90 bp | AACAAATACCCAAGGAAATGGATCTATATAGGGAAAGCTTTAGTGTGTTCCAAGAATGAGCCCACAGAATaGCTTGCTGGGGTTAAGACT | + |
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Preference number: 3 (lower is better) Translates to: NKYPRKWIYIGKALVCSKNEPTE*LAGVKT Trigger: AGTCTTAACCCCAGCAAGCAATTCTGTGGGCTCATT...CTTGGAACACACTAAAGCTTTCCCTATATAGATCCATTTCCTTGGGTATTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR TCA 72 bp | GTTCGAGTACCTCTGATGAGAATGAAAACAATGCACTaGCCTATGAAAAAGTCATTTAATGTATACTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: VRVPLMRMKTMH*PMKKSFNVYSR Trigger: TCTGGAGTATACATTAAATGACTTTTTCATAGGTCAGTGCATTGTTTTCATTCTCATCAGAGGTACTCGAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | CACTGCGGCCACGGCTTAGGAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTTGCCCAGTCTTTGCTaGCTGGCGGGCCTCGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HCGHGLGAALPPGAGERALPSLC*LAGLAF Trigger: AAAAGCGAGGCCCGCCAGGCAGCAAAGACTGGGCAA...GGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTCCTAAGCCGTGGCCGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | GCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCTGGATGTCTTAATGCTTaGGCCGGGGTGAGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ALPYSHASHTPVPSGIDAGCLNA*AGVRRA Trigger: TGCCCGCCTCACCCCGGCTCAAGCATTAAGACATCC...AGCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | GAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTTTATTTAACACACGGGCCCCCCAGGATGATCTCTaGGGCTCTGTAGAAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: EQHFLLVLGSEPLFNTRAPQDDL*GSVEAG Trigger: TCCCGCTTCTACAGAGCCCCAGAGATCATCCTGGGG...GGCCCGTGTGTTAAATAAAGGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | GAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTTTATTTAACACACGGGCCACCACAGCCCTTCAGTaGGGTTGCCCAGTCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: EQHFLLVLGSEPLFNTRATTALQ*GCPVFA Trigger: AGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGT...GGCCCGTGTGTTAAATAAAGGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | GCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCTAACTACCCGCTTCCCTaGCACCTTGTCCATGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ALPYSHASHTPVPSGIDANYPLP*HLVHGE Trigger: CTCACCATGGACAAGGTGCCAGGGAAGCGGGTAGTT...AGCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | GCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCTCTTCAGAGGGGTTGCTaGATGTGTCCGAATAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALPYSHASHTPVPSGIDALQRGC*MCPNRV Trigger: CACCCTATTCGGACACATTCAGCAACCCCTCTGAAG...AGCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | GAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTTTATTTAACACACGGGCCGCTTCTCGTAGGCAGTaGGGTGGTGTTTATACTGCT | + |
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Preference number: 4 (lower is better) Translates to: EQHFLLVLGSEPLFNTRAASRRQ*GGVYTA Trigger: AGCAGTATAAACACCACCTCACTGCCTACGAGAAGC...GGCCCGTGTGTTAAATAAAGGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | AGCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCCGTGGTTCCGGAAGGTaGAACTTTCTAGCATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SFALQPCLPHPSTLRNRCRGSGR*NFLACG Trigger: TCCACATGCTAGAAAGTTTCACCTTCCGGAACCACG...GCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | TTCCAAGGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTAGCCCTTCAGTGCGGTTaGCCAGTCTTTGCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FQGFNLLAEQHCCPKPAVALQCG*PVFAAW Trigger: CCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGC...TACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCCTTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | GCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCTCTGTTGCCAAATTCTTaGAACAGCTGTTCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: ALPYSHASHTPVPSGIDALLPNS*NSCSTF Trigger: GAAGGTGGAACAGCTGTTTCAAGAATTTGGCAACAG...AGCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | AGCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCTTTCTAGCATGTGGATaGCGTTCATGCTACCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SFALQPCLPHPSTLRNRCFLACG*RSCYQF Trigger: AAACTGGTAGCATGAACGTCATCCACATGCTAGAAA...GCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | GCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCTTCTTGCTTTTTAAGATaGTCCAAGATCCGGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ALPYSHASHTPVPSGIDASCFLR*SKIRIS Trigger: GGAGATCCGGATCTTGGAGCATCTTAAAAAGCAAGA...AGCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | ACGATGGAGTATTCAGTGAAGCAAAGCCATTCACTTGATGGCCAGCAGTTAAAAAGCGGCACCCCAGGATaGTCTCTGGGGCTCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TMEYSVKQSHSLDGQQLKSGTPG*SLGLCR Trigger: TCTACAGAGCCCCAGAGATCATCCTGGGGTGCCGCT...TTTTAACTGCTGGCCATCAAGTGAATGGCTTTGCTTCACTGAATACTCCATCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | GCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCTCTGACTGGAGAGTATTaGATCTTCTGTTGCCAAATT | + |
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Preference number: 4 (lower is better) Translates to: ALPYSHASHTPVPSGIDALTGEY*IFCCQI Trigger: AATTTGGCAACAGAAGATCCAATACTCTCCAGTCAG...AGCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | GGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTATCATATATCATGCAGGCCAACTaGTCTCCTTCGTCCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GFNLLAEQHCCPKPAVSYIMQAN*SPSSSP Trigger: TGGAGAGGACGAAGGAGACCAGTTGGCCTGCATGAT...ATATGATACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | ACGATGGAGTATTCAGTGAAGCAAAGCCATTCACTTGATGGCCAGCAGTTAAAACCAGTCTTTGCTGCCTaGCGGGCCTCGCTTTTTACC | + |
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Preference number: 4 (lower is better) Translates to: TMEYSVKQSHSLDGQQLKPVFAA*RASLFT Trigger: GGTAAAAAGCGAGGCCCGCCAGGCAGCAAAGACTGG...TTTTAACTGCTGGCCATCAAGTGAATGGCTTTGCTTCACTGAATACTCCATCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | ACGATGGAGTATTCAGTGAAGCAAAGCCATTCACTTGATGGCCAGCAGTTAAAAGCAGTTCAAAGGCCATaGACACGTGGTTCCGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TMEYSVKQSHSLDGQQLKAVQRP*TRGSGR Trigger: CCTTCCGGAACCACGTGTGCATGGCCTTTGAACTGC...TTTTAACTGCTGGCCATCAAGTGAATGGCTTTGCTTCACTGAATACTCCATCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | AAGGGAGACAAGCAGTCAGCTTGTGCTTTTAGAATATCTTCTATCGAGGAGCTGAACTCCCCTTGCCGATaGTTTTCAGCACCTCATAGC | + |
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Preference number: 4 (lower is better) Translates to: KGDKQSACAFRISSIEELNSPCR*FSAPHS Trigger: GCTATGAGGTGCTGAAAATCATCGGCAAGGGGAGTT...CAGCTCCTCGATAGAAGATATTCTAAAAGCACAAGCTGACTGCTTGTCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | AAGGGAGACAAGCAGTCAGCTTGTGCTTTTAGAATATCTTCTATCGAGGAGCTGTGCTCCAGAAGTTTCTaGGGTGGCATTCCTAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: KGDKQSACAFRISSIEELCSRSF*GGIPSN Trigger: GTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCA...CAGCTCCTCGATAGAAGATATTCTAAAAGCACAAGCTGACTGCTTGTCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | TTCCAAGGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTAAGTACTTGGCACGCTTaGATTGCTCCAGAAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FQGFNLLAEQHCCPKPAVSTWHA*IAPEVS Trigger: AGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACT...TACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCCTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | ACGATGGAGTATTCAGTGAAGCAAAGCCATTCACTTGATGGCCAGCAGTTAAAAACTTTTCCGAGTTGCTaGTGCCATCTGACTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TMEYSVKQSHSLDGQQLKTFPSC*CHLTGE Trigger: CTCTCCAGTCAGATGGCATCAGCAACTCGGAAAAGT...TTTTAACTGCTGGCCATCAAGTGAATGGCTTTGCTTCACTGAATACTCCATCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | GGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTATCATATGCTTTGGCAATACACTaGACAGAGGTATACTACCAC | + |
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Preference number: 4 (lower is better) Translates to: GFNLLAEQHCCPKPAVSYALAIH*TEVYYH Trigger: GTGGTAGTATACCTCTGTGCAGTGTATTGCCAAAGC...ATATGATACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | GGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTATCATATCACAAAGTAGATTTCTaGGTAGCTGACGATCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GFNLLAEQHCCPKPAVSYHKVDF*VADDLQ Trigger: CTGGAGATCGTCAGCTACCCAGAAATCTACTTTGTG...ATATGATACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | AACAAATACCCAAGGAAATGGATCTATATAGGGAAAGCTTTAGTGTGTTCCAAGCGACTGGAGGCAGCTTaGAACCCAGTCCCTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: NKYPRKWIYIGKALVCSKRLEAA*NPVPGK Trigger: CTTTCCAGGGACTGGGTTCCAAGCTGCCTCCAGTCG...CTTGGAACACACTAAAGCTTTCCCTATATAGATCCATTTCCTTGGGTATTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | GGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTATCATATCTAGCTAATCAGCTTTaGCAATACACTGCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GFNLLAEQHCCPKPAVSYLANQL*QYTAQR Trigger: CCTCTGTGCAGTGTATTGCCAAAGCTGATTAGCTAG...ATATGATACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR CAA 72 bp | GTACTCTTTCCATCTAGAATGAGCCCACAGAATTGCTaGCTGGGGTTAAGACTTCTAGCTTTGCCTTACAGC | + |
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Preference number: 4 (lower is better) Translates to: VLFPSRMSPQNC*LGLRLLALPYS Trigger: GCTGTAAGGCAAAGCTAGAAGTCTTAACCCCAGCAAGCAATTCTGTGGGCTCATTCTAGATGGAAAGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR TCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATAAGATTTCTGGGTAGCTaGCGATCTCCAGCTTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QGYLVKCKICKPLSTQAIRFLGS*RSPASR Trigger: ACGAGAAGCTGGAGATCGTCAGCTACCCAGAAATCT...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | TTTAATGTATACTCCAGATGGCCAATACAAGCTGGTTTGACATTAGCCCTTGAACCTTCTGGAGACAGGTaGTTCAGAGGGGTTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FNVYSRWPIQAGLTLALEPSGDR*FRGVAE Trigger: TTCAGCAACCCCTCTGAAGCACCTGTCTCCAGAAGG...TTCAAGGGCTAATGTCAAACCAGCTTGTATTGGCCATCTGGAGTATACATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | ACGATGGAGTATTCAGTGAAGCAAAGCCATTCACTTGATGGCCAGCAGTTAAAACTAGCAACTCTATCATaGAGGCCAACTGGTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TMEYSVKQSHSLDGQQLKLATLS*RPTGLL Trigger: AAGGAGACCAGTTGGCCTGCATGATAGAGTTGCTAG...TTTTAACTGCTGGCCATCAAGTGAATGGCTTTGCTTCACTGAATACTCCATCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR GCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATATTGGCACGCTTGGATTaGTCCAGAAGTTTCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGYLVKCKICKPLSTQAILARLD*SRSFCG Trigger: ACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAA...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATATGTGTCCGAATAGGGTaGGCCCTTGGTTTCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QGYLVKCKICKPLSTQAICVRIG*ALGFIY Trigger: ATAGATGAAACCAAGGGCCCACCCTATTCGGACACA...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATAGCTCATACAGGTCTATaGTTAGCAGTTCAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGYLVKCKICKPLSTQAIAHTGL*LAVQRP Trigger: TGGCCTTTGAACTGCTAAGCATAGACCTGTATGAGC...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | TCAGTGAATGGGCTTCAATTATTCCGTTTTCCATTTGCATGTTTGCAAGGTAATAAGGCCATGCACACGTaGTTCCGGAAGGTGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SVNGLQLFRFPFACLQGNKAMHT*FRKVKL Trigger: AAGTTTCACCTTCCGGAACCACGTGTGCATGGCCTT...ATTACCTTGCAAACATGCAAATGGAAAACGGAATAATTGAAGCCCATTCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCGAGTACCTCTGATGAGAATGAAAACAATGCACTGACCTATGAAAAAGTCGGCTTCAGGTCGCAGTaGATGATCTTGTTTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSTSDENENNALTYEKVGFRSQ*MILFLC Trigger: GCACAAAAACAAGATCATCCACTGCGACCTGAAGCC...GACTTTTTCATAGGTCAGTGCATTGTTTTCATTCTCATCAGAGGTACTCGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CCA 90 bp | CAAGCTGGTTTGACATTAGCCCTTGAAGCGTTCTTTTATAGTCATATAAAAATGGTGGCGCTTCGGCCGTaGTGTTTCAGGAGAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QAGLTLALEAFFYSHIKMVALRP*CFRRMF Trigger: AAACATTCTCCTGAAACACCACGGCCGAAGCGCCAC...CATTTTTATATGACTATAAAAGAACGCTTCAAGGGCTAATGTCAAACCAGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATATTGGAACCCAGTCCCTaGAAAGCATTTGTAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QGYLVKCKICKPLSTQAILEPSP*KAFVGL Trigger: TAACCCTACAAATGCTTTCCAGGGACTGGGTTCCAA...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR GCA 90 bp | AACAAATACCCAAGGAAATGGATCTATATAGGGAAAGCTTTAGTGTGTTCCAAGAGGTGGTGTTTATACTaGTTCAGCGCTTGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKYPRKWIYIGKALVCSKRWCLY*FSACSG Trigger: TCCTGAGCAAGCGCTGAAGCAGTATAAACACCACCT...CTTGGAACACACTAAAGCTTTCCCTATATAGATCCATTTCCTTGGGTATTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGGTTTGACATTAGCCCTTGAAGCGTTCTTTTATAGTCATATAAAAATGGGAAGCGTTTCTCATTaGGCACCATTTTCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAGLTLALEAFFYSHIKMGSVSH*APFSGP Trigger: TGGCCCTGAAAATGGTGCGCAATGAGAAACGCTTCC...CATTTTTATATGACTATAAAAGAACGCTTCAAGGGCTAATGTCAAACCAGCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGTTTGACATTAGCCCTTGAAGCGTTCTTTTATAGTCATATAAAAATGGTTGCTGATGCCATCTaGCTGGAGAGTATTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGLTLALEAFFYSHIKMVADAI*LESIGS Trigger: AGATCCAATACTCTCCAGTCAGATGGCATCAGCAAC...CATTTTTATATGACTATAAAAGAACGCTTCAAGGGCTAATGTCAAACCAGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR GCA 90 bp | AACAAATACCCAAGGAAATGGATCTATATAGGGAAAGCTTTAGTGTGTTCCAAGATGATCTTGTTTTTGTaGAGAGCGTCCAGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKYPRKWIYIGKALVCSKMILFL*RASRDC Trigger: ACAGTCCCTGGACGCTCTGCACAAAAACAAGATCAT...CTTGGAACACACTAAAGCTTTCCCTATATAGATCCATTTCCTTGGGTATTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATAAAAGTTCTGCAAGGATaGAACCAAAGCTCCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: QGYLVKCKICKPLSTQAIKVLQG*NQSSIC Trigger: ACATATGGAGCTTTGGTTGCATCCTTGCAGAACTTT...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGAATGGGCTTCAATTATTCCGTTTTCCATTTGCATGTTTGCAAGGTAATCTGATGCCATCTGACTaGAGAGTATTGGATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVNGLQLFRFPFACLQGNLMPSD*RVLDLL Trigger: CAGAAGATCCAATACTCTCCAGTCAGATGGCATCAG...ATTACCTTGCAAACATGCAAATGGAAAACGGAATAATTGAAGCCCATTCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGTTTGACATTAGCCCTTGAAGCGTTCTTTTATAGTCATATAAAAATGGTTTCAGAAACTCTATaGACAAGTAGTCACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGLTLALEAFFYSHIKMVSETL*TSSHHS Trigger: GCTGTGGTGACTACTTGTTCATAGAGTTTCTGAAAC...CATTTTTATATGACTATAAAAGAACGCTTCAAGGGCTAATGTCAAACCAGCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATATATTGGATCTTCTGTTaGCAAATTCTTGAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGYLVKCKICKPLSTQAIYWIFC*QILETA Trigger: AGCTGTTTCAAGAATTTGGCAACAGAAGATCCAATA...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| 3UTR CAA 72 bp | TTTAATGTATACTCCAGATGGCCAATACAAGCTGGTTaGACATTAGCCCTTGAAGCGTTCTTTTATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FNVYSRWPIQAG*TLALEAFFYSH Trigger: ATGACTATAAAAGAACGCTTCAAGGGCTAATGTCAAACCAGCTTGTATTGGCCATCTGGAGTATACATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTTTATTTAACACACGGGCCGCGGTTGCCCAGTCTTaGCTGCCTGGCGGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EQHFLLVLGSEPLFNTRAAVAQS*LPGGPR Trigger: GCGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGC...GGCCCGTGTGTTAAATAAAGGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CAA 90 bp | CACTGCGGCCACGGCTTAGGAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCCTTGGCACGCTTGGATaGCTCCAGAAGTTTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HCGHGLGAALPPGAGERALGTLG*LQKFLR Trigger: CCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAG...GGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTCCTAAGCCGTGGCCGCAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 90 bp | CCCCTGCGTGAGCGACCCCCGAGAAGCACCACCCTCCCGTCCGTCTaGGTAGATACGGAGCAGTATCGAGGCAAGCCTTTGGAGTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: PLRERPPRSTTLPSV*VDTEQYRGKPLELI Trigger: TATTAACTCCAAAGGCTTGCCTCGATACTGCTCCGTATCTACCCAGACGGACGGGAGGGTGGTGCTTCTCGGGGGTCGCTCACGCAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTTTATTTAACACACGGGCCAGCCCTTCAGTGCGGTaGCCCAGTCTTTGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EQHFLLVLGSEPLFNTRASPSVR*PSLCCL Trigger: CAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCT...GGCCCGTGTGTTAAATAAAGGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | CACTGCGGCCACGGCTTAGGAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTCTGACTGGAGAGTATaGGATCTTCTGTTGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HCGHGLGAALPPGAGERASDWRV*DLLLPN Trigger: ATTTGGCAACAGAAGATCCAATACTCTCCAGTCAGA...GGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTCCTAAGCCGTGGCCGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS TCA 90 bp | GGCGGGCAGAGGGGTCCCACTGGAGGCATCGTTTCAGAAACTCTATaGACAAGTAGTCACCACAGCCCTTCAGTGCGGTTGCCCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GGQRGPTGGIVSETL*TSSHHSPSVRLPSL Trigger: AAGACTGGGCAACCGCACTGAAGGGCTGTGGTGACTACTTGTTCATAGAGTTTCTGAAACGATGCCTCCAGTGGGACCCCTCTGCCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 90 bp | CAGAAACTCTATGAACAAGTAGTCACCACAGCCCTTCAGTGCGGTTaGCCAGTCTTTGCTGCCTGGCGGGCCTCGCTTTTTACCCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QKLYEQVVTTALQCG*PVFAAWRASLFTPA Trigger: CGCAGGGGTAAAAAGCGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGTGACTACTTGTTCATAGAGTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 90 bp | CCATATGTCGATCGGGGTGCTGTAGCGGCACCCCAGGATGATCTCTaGGGCTCTGTAGAAGCGGGACTGGATATACGTGTAAAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PYVDRGAVAAPQDDL*GSVEAGLDIRVKLL Trigger: CAGAAGCTTTACACGTATATCCAGTCCCGCTTCTACAGAGCCCCAGAGATCATCCTGGGGTGCCGCTACAGCACCCCGATCGACATATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 90 bp | ATTGCTCCAGAAGTTTCTGCGGTGGCATTCCTAGCAACTCTATCATaGAGGCCAACTGGTCTCCTTCGTCCTCTCCAGGGAACAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IAPEVSAVAFLATLS*RPTGLLRPLQGTGA Trigger: AGCCCCTGTTCCCTGGAGAGGACGAAGGAGACCAGTTGGCCTGCATGATAGAGTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 90 bp | TTACTGGCTATCCCAACGACTGGAGGCAGCTTGGAACCCAGTCCCTaGAAAGCATTTGTAGGGTTAACTACCCGCTTCCCTGGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLAIPTTGGSLEPSP*KAFVGLTTRFPGTL Trigger: CAAGGTGCCAGGGAAGCGGGTAGTTAACCCTACAAATGCTTTCCAGGGACTGGGTTCCAAGCTGCCTCCAGTCGTTGGGATAGCCAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 90 bp | TCGTTTCAGAAACTCTATGAACAAGTAGTCACCACAGCCCTTCAGTaGGGTTGCCCAGTCTTTGCTGCCTGGCGGGCCTCGCTTTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: SFQKLYEQVVTTALQ*GCPVFAAWRASLFT Trigger: GGTAAAAAGCGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGTGACTACTTGTTCATAGAGTTTCTGAAACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 90 bp | AACTCCCTGCCGCTTTTTGGCATTCGGACCCACAAAGTAGATTTCTaGGTAGCTGACGATCTCCAGCTTCTCGTAGGCAGTGAGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NSLPLFGIRTHKVDF*VADDLQLLVGSEVV Trigger: CACCACCTCACTGCCTACGAGAAGCTGGAGATCGTCAGCTACCCAGAAATCTACTTTGTGGGTCCGAATGCCAAAAAGCGGCAGGGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016670.9 ENSMUST00000189756.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGCACTTCCTCCTGGTGCTGGGGAGCGAGCCTTTATTTAACACACGGGCCTCTGTTGCCAAATTCTaGAAACAGCTGTTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: EQHFLLVLGSEPLFNTRASVAKF*KQLFHL Trigger: AAGGTGGAACAGCTGTTTCAAGAATTTGGCAACAGA...GGCCCGTGTGTTAAATAAAGGCTCGCTCCCCAGCACCAGGAGGAAGTGCTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CAA 90 bp | AGCTTTGCCTTACAGCCATGCCTCCCACACCCCAGTACCCTCCGGAATAGATGCGGTTTGGGTGTAGACTaGCTAATCCAAGGATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFALQPCLPHPSTLRNRCGLGVD*LIQGCL Trigger: AAGACATCCTTGGATTAGCAAGTCTACACCCAAACC...GCATCTATTCCGGAGGGTACTGGGGTGTGGGAGGCATGGCTGTAAGGCAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS TCA 90 bp | ACGTGTAAAGCTTCTGATACTCGAAGCAGCTGGAGCCAAAGTCGATaGCCTTGGTGGCGCTTCGGCCGTGGTGTTTCAGGAGAATGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TCKASDTRSSWSQSR*PWWRFGRGVSGECF Trigger: AAAACATTCTCCTGAAACACCACGGCCGAAGCGCCACCAAGGTCATCGACTTTGGCTCCAGCTGCTTCGAGTATCAGAAGCTTTACACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 90 bp | ACCCAGTCCCTGGAAAGCATTTGTAGGGTTAACTACCCGCTTCCCTaGCACCTTGTCCATGGTGAGAGGTTTGGGTGTAGACTTGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: TQSLESICRVNYPLP*HLVHGERFGCRLAN Trigger: ATTAGCAAGTCTACACCCAAACCTCTCACCATGGACAAGGTGCCAGGGAAGCGGGTAGTTAACCCTACAAATGCTTTCCAGGGACTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS CCA 90 bp | GGAGACAGGTGCTTCAGAGGGGTTGCTGAATGTGTCCGAATAGGGTaGGCCCTTGGTTTCATCTATCATCATGAAAGTATCATAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: GDRCFRGVAECVRIG*ALGFIYHHESIIDT Trigger: GGTGTCTATGATACTTTCATGATGATAGATGAAACCAAGGGCCCACCCTATTCGGACACATTCAGCAACCCCTCTGAAGCACCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS TCA 90 bp | CCCCTGAGAAGCCGGAGAAGACTTTTCCGAGTTGCTGATGCCATCTaGCTGGAGAGTATTGGATCTTCTGTTGCCAAATTCTTGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: PLRSRRRLFRVADAI*LESIGSSVAKFLKQ Trigger: CTGTTTCAAGAATTTGGCAACAGAAGATCCAATACTCTCCAGTCAGATGGCATCAGCAACTCGGAAAAGTCTTCTCCGGCTTCTCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016670.9 ENSMUST00000189756.2 |
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| CDS GCA 90 bp | GAGTTAATAAAGTACTTGGCACGCTTGGATTGCTCCAGAAGTTTCTaGGGTGGCATTCCTAGCAACTCTATCATGCAGGCCAACTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELIKYLARLDCSRSF*GGIPSNSIMQANWS Trigger: AGACCAGTTGGCCTGCATGATAGAGTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 90 bp | CGAGGCAAGCCTTTGGAGTTAATAAAGTACTTGGCACGCTTGGATTaGTCCAGAAGTTTCTGCGGTGGCATTCCTAGCAACTCTATCATG | + |
|
Preference number: 5 (lower is better) Translates to: RGKPLELIKYLARLD*SRSFCGGIPSNSIM Trigger: CATGATAGAGTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACTCCAAAGGCTTGCCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CAA 90 bp | AACAAATACCCAAGGAAATGGATCTATATAGGGAAAGCTTTAGTGTGTTCCAAGGGCCTGGAGGAAAGGTaGCACTTCACCGCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKYPRKWIYIGKALVCSKGLEER*HFTALR Trigger: CCTGAGCGCGGTGAAGTGCAACCTTTCCTCCAGGCC...CTTGGAACACACTAAAGCTTTCCCTATATAGATCCATTTCCTTGGGTATTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGACAAGCAGTCAGCTTGTGCTTTTAGAATATCTTCTATCGAGGAGCTGTCGCAGTGGATGATCTaGTTTTTGTGCAGAGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGDKQSACAFRISSIEELSQWMI*FLCRAS Trigger: GGACGCTCTGCACAAAAACAAGATCATCCACTGCGA...CAGCTCCTCGATAGAAGATATTCTAAAAGCACAAGCTGACTGCTTGTCTCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS-3UTR CAA 90 bp | GGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTATCATATAAGTACTTGGCACGCTaGGATTGCTCCAGAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFNLLAEQHCCPKPAVSYKYLAR*DCSRSF Trigger: GAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTT...ATATGATACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | TTCCAAGGGTTCAATCTGTTAGCTGAACAGCACTGCTGTCCTAAGCCTGCAGTAGAGTTAATAAAGTACTaGGCACGCTTGGATTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FQGFNLLAEQHCCPKPAVELIKY*ARLDCS Trigger: GGAGCAATCCAAGCGTGCCAAGTACTTTATTAACTC...TACTGCAGGCTTAGGACAGCAGTGCTGTTCAGCTAACAGATTGAACCCTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATAGAAGACTTTTCCGAGTaGCTGATGCCATCTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QGYLVKCKICKPLSTQAIEDFSE*LMPSDW Trigger: CCAGTCAGATGGCATCAGCAACTCGGAAAAGTCTTC...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGGTTTGACATTAGCCCTTGAAGCGTTCTTTTATAGTCATATAAAAATGTGGAAGCGTTTCTCATaGCGCACCATTTTCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAGLTLALEAFFYSHIKMWKRFS*RTIFRA Trigger: GGCCCTGAAAATGGTGCGCAATGAGAAACGCTTCCA...CATTTTTATATGACTATAAAAGAACGCTTCAAGGGCTAATGTCAAACCAGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGGTTTGACATTAGCCCTTGAAGCGTTCTTTTATAGTCATATAAAAATGTCCATGGTGAGAGGTTaGGGTGTAGACTTGCTAATC | + |
|
Preference number: 5 (lower is better) Translates to: QAGLTLALEAFFYSHIKMSMVRG*GVDLLI Trigger: GATTAGCAAGTCTACACCCAAACCTCTCACCATGGA...CATTTTTATATGACTATAAAAGAACGCTTCAAGGGCTAATGTCAAACCAGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTATACTCCAGATGGCCAATACAAGCTGGTTTGACATTAGCCCTTGAAGCTACCAGTTTTGTCTaGCTTTTTAAGATGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FNVYSRWPIQAGLTLALEATSFV*LFKMLQ Trigger: TTGGAGCATCTTAAAAAGCAAGACAAAACTGGTAGC...TTCAAGGGCTAATGTCAAACCAGCTTGTATTGGCCATCTGGAGTATACATTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTTATTTGGTAAAGTGTAAGATCTGTAAACCACTGAGTACCCAGGCTATATTCATGCTACCAGTTTaGTCTTGCTTTTTAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: QGYLVKCKICKPLSTQAIFMLPV*SCFLRC Trigger: GCATCTTAAAAAGCAAGACAAAACTGGTAGCATGAA...TATAGCCTGGGTACTCAGTGGTTTACAGATCTTACACTTTACCAAATAACCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
||
| CDS GCA 72 bp | CACCACAGCCCTTCAGTGCGGTTGCCCAGTCTTTGCTaGCTGGCGGGCCTCGCTTTTTACCCCTGCGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HHSPSVRLPSLC*LAGLAFYPCVS Trigger: GCTCACGCAGGGGTAAAAAGCGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 72 bp | AGTCACCACAGCCCTTCAGTGCGGTTGCCCAGTCTTTaGTGCCTGGCGGGCCTCGCTTTTTACCCCTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SHHSPSVRLPSL*CLAGLAFYPCV Trigger: CACGCAGGGGTAAAAAGCGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGTGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 72 bp | GAGCGACCCCCGAGAAGCACCACCCTCCCGTCCGTCTaGGTAGATACGGAGCAGTATCGAGGCAAGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ERPPRSTTLPSV*VDTEQYRGKPL Trigger: CAAAGGCTTGCCTCGATACTGCTCCGTATCTACCCAGACGGACGGGAGGGTGGTGCTTCTCGGGGGTCGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 72 bp | TCTCCTCGGCCGCCTGGCGATGGAAGCGTTTCTCATTaGGCACCATTTTCAGGGCCACGTACTGCCGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SPRPPGDGSVSH*APFSGPRTAEV Trigger: AACTTCGGCAGTACGTGGCCCTGAAAATGGTGCGCAATGAGAAACGCTTCCATCGCCAGGCGGCCGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 72 bp | ATCTCCTCGGCCGCCTGGCGATGGAAGCGTTTCTCATaGCGCACCATTTTCAGGGCCACGTACTGCCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ISSAAWRWKRFS*RTIFRATYCRS Trigger: ACTTCGGCAGTACGTGGCCCTGAAAATGGTGCGCAATGAGAAACGCTTCCATCGCCAGGCGGCCGAGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 90 bp | CAGCTTCTCGTAGGCAGTGAGGTGGTGTTTATACTGCTTCAGCGCTaGCTCAGGAGTCAGCGGCAGCACCTTAGACGGCCTGGAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QLLVGSEVVFILLQR*LRSQRQHLRRPGGK Trigger: CTTTCCTCCAGGCCGTCTAAGGTGCTGCCGCTGACTCCTGAGCAAGCGCTGAAGCAGTATAAACACCACCTCACTGCCTACGAGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016670.9 ENSMUST00000189756.2 |
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| CDS TCA 72 bp | GCTTCTGATACTCGAAGCAGCTGGAGCCAAAGTCGATaGCCTTGGTGGCGCTTCGGCCGTGGTGTTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ASDTRSSWSQSR*PWWRFGRGVSG Trigger: TCCTGAAACACCACGGCCGAAGCGCCACCAAGGTCATCGACTTTGGCTCCAGCTGCTTCGAGTATCAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 72 bp | AAACTCTATGAACAAGTAGTCACCACAGCCCTTCAGTaGGGTTGCCCAGTCTTTGCTGCCTGGCGGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: KLYEQVVTTALQ*GCPVFAAWRAS Trigger: CGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGTGACTACTTGTTCATAGAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 72 bp | TTTTTGTGCAGAGCGTCCAGGGACTGTAGGATGGACTaGGCGAACTTCCGAACCAACTGGACGCTGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FLCRASRDCRMD*ANFRTNWTLKP Trigger: GGGCTTCAGCGTCCAGTTGGTTCGGAAGTTCGCCCAGTCCATCCTACAGTCCCTGGACGCTCTGCACAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 72 bp | GTAGGCAGTGAGGTGGTGTTTATACTGCTTCAGCGCTaGCTCAGGAGTCAGCGGCAGCACCTTAGACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VGSEVVFILLQR*LRSQRQHLRRP Trigger: AGGCCGTCTAAGGTGCTGCCGCTGACTCCTGAGCAAGCGCTGAAGCAGTATAAACACCACCTCACTGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016670.9 ENSMUST00000189756.2 |
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| CDS GCA 72 bp | GAAGTTTCTGCGGTGGCATTCCTAGCAACTCTATCATaGAGGCCAACTGGTCTCCTTCGTCCTCTCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: EVSAVAFLATLS*RPTGLLRPLQG Trigger: TCCCTGGAGAGGACGAAGGAGACCAGTTGGCCTGCATGATAGAGTTGCTAGGAATGCCACCGCAGAAACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 72 bp | ATCCCAACGACTGGAGGCAGCTTGGAACCCAGTCCCTaGAAAGCATTTGTAGGGTTAACTACCCGCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: IPTTGGSLEPSP*KAFVGLTTRFP Trigger: AGGGAAGCGGGTAGTTAACCCTACAAATGCTTTCCAGGGACTGGGTTCCAAGCTGCCTCCAGTCGTTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS TCA 72 bp | AGGGGTCCCACTGGAGGCATCGTTTCAGAAACTCTATaGACAAGTAGTCACCACAGCCCTTCAGTGCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RGPTGGIVSETL*TSSHHSPSVRL Trigger: CAACCGCACTGAAGGGCTGTGGTGACTACTTGTTCATAGAGTTTCTGAAACGATGCCTCCAGTGGGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 72 bp | CTCTCCAGGGAACAGGGGCTGTCCTGTCAAAAGTTCTaGAAGGATGCAACCAAAGCTCCATATGTCGATCGG | + |
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Preference number: 6 (lower is better) Translates to: LSREQGLSCQKF*KDATKAPYVDR Trigger: CCGATCGACATATGGAGCTTTGGTTGCATCCTTGCAGAACTTTTGACAGGACAGCCCCTGTTCCCTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 90 bp | CTCCCGTCCGTCTGGGTAGATACGGAGCAGTATCGAGGCAAGCCTTaGGAGTTAATAAAGTACTTGGCACGCTTGGATTGCTCCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LPSVWVDTEQYRGKP*ELIKYLARLDCSRS Trigger: ACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACTCCAAAGGCTTGCCTCGATACTGCTCCGTATCTACCCAGACGGACGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 90 bp | CCCTGGAAAGCATTTGTAGGGTTAACTACCCGCTTCCCTGGCACCTaGTCCATGGTGAGAGGTTTGGGTGTAGACTTGCTAATCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PWKAFVGLTTRFPGT*SMVRGLGVDLLIQG Trigger: TCCTTGGATTAGCAAGTCTACACCCAAACCTCTCACCATGGACAAGGTGCCAGGGAAGCGGGTAGTTAACCCTACAAATGCTTTCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 90 bp | AGGTTAGCTTTAAGCTTACTGGCTATCCCAACGACTGGAGGCAGCTaGGAACCCAGTCCCTGGAAAGCATTTGTAGGGTTAACTACCCGC | + |
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Preference number: 6 (lower is better) Translates to: RLALSLLAIPTTGGS*EPSPWKAFVGLTTR Trigger: GCGGGTAGTTAACCCTACAAATGCTTTCCAGGGACTGGGTTCCAAGCTGCCTCCAGTCGTTGGGATAGCCAGTAAGCTTAAAGCTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 72 bp | ACGTTCATGCTACCAGTTTTGTCTTGCTTTTTAAGATaGTCCAAGATCCGGATCTCCTCGGCCGCCTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: TFMLPVLSCFLR*SKIRISSAAWR Trigger: TCGCCAGGCGGCCGAGGAGATCCGGATCTTGGAGCATCTTAAAAAGCAAGACAAAACTGGTAGCATGAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 72 bp | AAGTACTTGGCACGCTTGGATTGCTCCAGAAGTTTCTaGGGTGGCATTCCTAGCAACTCTATCATGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: KYLARLDCSRSF*GGIPSNSIMQA Trigger: GGCCTGCATGATAGAGTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 72 bp | CTGGAAAGCATTTGTAGGGTTAACTACCCGCTTCCCTaGCACCTTGTCCATGGTGAGAGGTTTGGGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: LESICRVNYPLP*HLVHGERFGCR Trigger: TCTACACCCAAACCTCTCACCATGGACAAGGTGCCAGGGAAGCGGGTAGTTAACCCTACAAATGCTTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 72 bp | GCATTTGTAGGGTTAACTACCCGCTTCCCTGGCACCTaGTCCATGGTGAGAGGTTTGGGTGTAGACTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: AFVGLTTRFPGT*SMVRGLGVDLL Trigger: TAGCAAGTCTACACCCAAACCTCTCACCATGGACAAGGTGCCAGGGAAGCGGGTAGTTAACCCTACAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS TCA 72 bp | CCGAATAGGGTGGGCCCTTGGTTTCATCTATCATCATaGAAGTATCATAGACACCATCCCCCAACCTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PNRVGPWFHLSS*KYHRHHPPTSA Trigger: AGCGGAGGTTGGGGGATGGTGTCTATGATACTTTCATGATGATAGATGAAACCAAGGGCCCACCCTATTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 72 bp | TTAAGCTTACTGGCTATCCCAACGACTGGAGGCAGCTaGGAACCCAGTCCCTGGAAAGCATTTGTAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LSLLAIPTTGGS*EPSPWKAFVGL Trigger: TAACCCTACAAATGCTTTCCAGGGACTGGGTTCCAAGCTGCCTCCAGTCGTTGGGATAGCCAGTAAGCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 72 bp | GGCAAGCCTTTGGAGTTAATAAAGTACTTGGCACGCTaGGATTGCTCCAGAAGTTTCTGCGGTGGCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: GKPLELIKYLAR*DCSRSFCGGIP Trigger: AGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACTCCAAAGGCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 72 bp | GTCTGGGTAGATACGGAGCAGTATCGAGGCAAGCCTTaGGAGTTAATAAAGTACTTGGCACGCTTGGATTGC | + |
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Preference number: 6 (lower is better) Translates to: VWVDTEQYRGKP*ELIKYLARLDC Trigger: GCAATCCAAGCGTGCCAAGTACTTTATTAACTCCAAAGGCTTGCCTCGATACTGCTCCGTATCTACCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 90 bp | CAGTATCGAGGCAAGCCTTTGGAGTTAATAAAGTACTTGGCACGCTaGGATTGCTCCAGAAGTTTCTGCGGTGGCATTCCTAGCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: QYRGKPLELIKYLAR*DCSRSFCGGIPSNS Trigger: AGAGTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACTCCAAAGGCTTGCCTCGATACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS TCA 72 bp | AGCCGGAGAAGACTTTTCCGAGTTGCTGATGCCATCTaGCTGGAGAGTATTGGATCTTCTGTTGCCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: SRRRLFRVADAI*LESIGSSVAKF Trigger: GAATTTGGCAACAGAAGATCCAATACTCTCCAGTCAGATGGCATCAGCAACTCGGAAAAGTCTTCTCCGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016670.9 ENSMUST00000189756.2 |
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| CDS GCA 72 bp | CCTTTGGAGTTAATAAAGTACTTGGCACGCTTGGATTaGTCCAGAAGTTTCTGCGGTGGCATTCCTAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: PLELIKYLARLD*SRSFCGGIPSN Trigger: GTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACTCCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CCA 72 bp | TGCTTCAGAGGGGTTGCTGAATGTGTCCGAATAGGGTaGGCCCTTGGTTTCATCTATCATCATGAAAGTATC | + |
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Preference number: 6 (lower is better) Translates to: CFRGVAECVRIG*ALGFIYHHESI Trigger: GATACTTTCATGATGATAGATGAAACCAAGGGCCCACCCTATTCGGACACATTCAGCAACCCCTCTGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS GCA 72 bp | AGCATGTGGATGACGTTCATGCTACCAGTTTTGTCTTaGTTTTTAAGATGCTCCAAGATCCGGATCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SMWMTFMLPVLS*FLRCSKIRISS Trigger: CGAGGAGATCCGGATCTTGGAGCATCTTAAAAAGCAAGACAAAACTGGTAGCATGAACGTCATCCACATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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| CDS CAA 72 bp | CTTTCTAGCATGTGGATGACGTTCATGCTACCAGTTTaGTCTTGCTTTTTAAGATGCTCCAAGATCCGGATC | + |
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Preference number: 6 (lower is better) Translates to: LSSMWMTFMLPV*SCFLRCSKIRI Trigger: GATCCGGATCTTGGAGCATCTTAAAAAGCAAGACAAAACTGGTAGCATGAACGTCATCCACATGCTAGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016670.9 |
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