Pregenerated sensors for DYRK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028630Ensembl transcript IDs: ENSMUST00000004281.10
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACGGACACATCTCAGTTTCCACTTATCCACTAAATGCGGCTCGGTaGCTTAAGCACATCAGAATGTTAAGTGGGCAGTTGAAAGCGGGC | + |
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Preference number: 1 (lower is better) Translates to: NGHISVSTYPLNAAR*LKHIRMLSGQLKAG Trigger: GCCCGCTTTCAACTGCCCACTTAACATTCTGATGTGCTTAAGCCACCGAGCCGCATTTAGTGGATAAGTGGAAACTGAGATGTGTCCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR TCA 90 bp | CTAAATCTGAAAACAGCTGAGACATCCCTAGACAATGGTAACCTGTaGGACCTGTTTCCAAGCCAACTCCTAGTCGCTATCAGAGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LNLKTAETSLDNGNL*DLFPSQLLVAIRAL Trigger: AAGGGCTCTGATAGCGACTAGGAGTTGGCTTGGAAACAGGTCTCACAGGTTACCATTGTCTAGGGATGTCTCAGCTGTTTTCAGATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR CCA 90 bp | CTGGTCGCTAGGGTTCAGACCCACTACAACACTTCCCATGTCAAGTaGCAACAGCAGCATCTCACAGAAATCTGTACATACATATATACA | + |
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Preference number: 1 (lower is better) Translates to: LVARVQTHYNTSHVK*QQQHLTEICTYIYT Trigger: TGTATATATGTATGTACAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGGGTCTGAACCCTAGCGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR CCA 90 bp | GCCTATAAATCTAGATATTTAAGACAGATGTTATCTCCGCAGAGGTaGCATCCCTCTTTACTACCTCTCATTCAAAGAGTTAAAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: AYKSRYLRQMLSPQR*HPSLLPLIQRVKEA Trigger: GGCCTCTTTAACTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCTGTCTTAAATATCTAGATTTATAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGACCTGCAGTGTGAACTaGCTCCAGTCTAGGCGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LRLRQQPSENRRREPGGETCSVN*LQSRRL Trigger: TAGCCGCCTAGACTGGAGTCAGTTCACACTGCAGGT...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | TTACCTAACTCTCAGTTACTCTCTCAGGTAAAGCGTCATTCCCCACAAAAACACCGGGCTGCTTCCGTGTaGACCTGGAGCCAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPNSQLLSQVKRHSPQKHRAASV*TWSQER Trigger: TCTCTCCTGGCTCCAGGTTCACACGGAAGCAGCCCG...GTGTTTTTGTGGGGAATGACGCTTTACCTGAGAGAGTAACTGAGAGTTAGGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGCTAAGGGAACCTCTGTaGCACCTGCAGTGTGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PLQHFPCQVATAASHRNLLREPL*HLQCEL Trigger: CAGTTCACACTGCAGGTGCCACAGAGGTTCCCTTAG...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR GCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAATCTCTCTCTTCAGATTaGCAGCATCAGGGGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: LTGNFLGLAGDRALSTCKSLSSD*QHQGDW Trigger: CCAGTCCCCCTGATGCTGGCAATCTGAAGAGAGAGA...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGGGCAACAGATGTGTGTaGTGGAAGAGGAGCGAACAA | + |
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Preference number: 2 (lower is better) Translates to: PLQHFPCQVATAASHRNLGNRCV*WKRSEQ Trigger: TTGTTCGCTCCTCTTCCACCACACACATCTGTTGCC...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR CAA 90 bp | AAAGCTCCTCACAAAAGTTCCGCTGGCATCTACGAAGAACCAGTTTaGTGTGGTGGGGGAAAGGCAAACCATCTTAGTCCACTTCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: KAPHKSSAGIYEEPV*CGGGKANHLSPLLN Trigger: GTTTAGAAGTGGACTAAGATGGTTTGCCTTTCCCCCACCACACAAAACTGGTTCTTCGTAGATGCCAGCGGAACTTTTGTGAGGAGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGCTCCCTCCTCCACTCTaGCCCAGATTAATTTATGAA | + |
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Preference number: 2 (lower is better) Translates to: PLQHFPCQVATAASHRNLLPPPL*PRLIYE Trigger: TTCATAAATTAATCTGGGTCAGAGTGGAGGAGGGAG...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAGTGGCACCTGCAGTGTaGACTGACTCCAGTCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRVAPAV*TDSSLG Trigger: GCCTAGACTGGAGTCAGTTCACACTGCAGGTGCCAC...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGACCAGTTTTGTGTGGTaGGGGAAAGGCAAACCATCT | + |
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Preference number: 2 (lower is better) Translates to: RCYLRRGGIPLYYLSFKETSFVW*GKGKPS Trigger: AGATGGTTTGCCTTTCCCCCACCACACAAAACTGGT...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGACCACGAAAACAGAGTaGATGTGTTTGACCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: PLQHFPCQVATAASHRNLTTKTE*MCLTNL Trigger: CAGATTGGTCAAACACATTCACTCTGTTTTCGTGGT...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGAATTGTAAAAATCCCTaGCCATCCTTACTGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PLQHFPCQVATAASHRNLNCKNP*PSLLEP Trigger: TGGCTCCAGTAAGGATGGCCAGGGATTTTTACAATT...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAAGACAGAATGGCAGCTaGAATGTCTCTCTGTGTTAT | + |
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Preference number: 2 (lower is better) Translates to: LTGNFLGLAGDRALSTCKRQNGS*NVSLCY Trigger: ATAACACAGAGAGACATTTCAGCTGCCATTCTGTCT...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGTCAGGCCATTTAACTTaGCATTGGAATTTCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RCYLRRGGIPLYYLSFKESGHLT*HWNFSS Trigger: GGAGGAGAAATTCCAATGTCAAGTTAAATGGCCTGA...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGTTAATTTATGAAAAATaGAGGCAAGGCGGGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PLQHFPCQVATAASHRNLLIYEK*RQGGLL Trigger: AAGCAGCCCGCCTTGCCTCCATTTTTCATAAATTAA...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | TTACCTAACTCTCAGTTACTCTCTCAGGTAAAGCGTCATTCCCCACAAAAACACCGGCTAACTCTTCTTTaGAACTACGCAAATCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: LPNSQLLSQVKRHSPQKHRLTLL*NYANPH Trigger: GTGGGGATTTGCGTAGTTCCAAAGAAGAGTTAGCCG...GTGTTTTTGTGGGGAATGACGCTTTACCTGAGAGAGTAACTGAGAGTTAGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR GCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAGTCCTTAAAATTAGGTaGAAAAGCAATTCCGTAACC | + |
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Preference number: 2 (lower is better) Translates to: LTGNFLGLAGDRALSTCKVLKIR*KSNSVT Trigger: GGTTACGGAATTGCTTTTGCACCTAATTTTAAGGAC...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGAAGAACCAGTTTTGTGTaGTGGGGGAAAGGCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: IQNKRHIINTKGTISPLRRTSFV*WGKGKP Trigger: TGGTTTGCCTTTCCCCCACCACACAAAACTGGTTCT...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGACATCAGAATGTTAAGTaGGCAGTTGAAAGCGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: IQNKRHIINTKGTISPLRHQNVK*AVESGQ Trigger: TTGCCCGCTTTCAACTGCCCACTTAACATTCTGATG...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTCTAAATGCGGCTCGGTaGCTTAAGCACATCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: TALCWAILKPLPTESVDFLNAAR*LKHIRM Trigger: CATTCTGATGTGCTTAAGCCACCGAGCCGCATTTAG...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTAACAGATGTGTGTGGTaGAAGAGGAGCGAACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: TALCWAILKPLPTESVDFNRCVW*KRSEQE Trigger: CTCTTGTTCGCTCCTCTTCCACCACACACATCTGTT...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGAAAGCCTTGTAGCACATaGTGGTTCCATATATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: IQNKRHIINTKGTISPLRKPCST*WFHIWV Trigger: TACCCATATATGGAACCATCATGTGCTACAAGGCTT...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTATGGCCCAATGCTACTaGTGCCTAAAGTGTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: TALCWAILKPLPTESVDFMAQCY*CLKCFL Trigger: CAGAAAACACTTTAGGCATCAGTAGCATTGGGCCAT...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGAGAAGAATCAATGGCCTaGCACCAATGTGATTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: IQNKRHIINTKGTISPLREESMA*HQCDFS Trigger: AGAGAAATCACATTGGTGGCAGGCCATTGATTCTTC...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTGAGGCCAAAAATGCATaGCCTGTAACATGGCATTCA | + |
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Preference number: 2 (lower is better) Translates to: TALCWAILKPLPTESVDFEAKNA*PVTWHS Trigger: TGAATGCCATGTTACAGGGCATGCATTTTTGGCCTC...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTGCATGCCCTGTAACATaGCATTCAGAACAAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TALCWAILKPLPTESVDFACPVT*HSEQKA Trigger: TGCCTTTTGTTCTGAATGCCATGTTACAGGGCATGC...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR GCA 72 bp | CTAAGGGCACAATTTCTCCTCTACGATGTTAATCTATaGTGCCCTGCGTCCCTCCGTGTTCCACGGTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: LRAQFLLYDVNL*CPASLRVPRLC Trigger: GCACAACCGTGGAACACGGAGGGACGCAGGGCAGCATAGATTAACATCGTAGAGGAGAAATTGTGCCCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CAA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGCTCTCTCTCTTCAGATaGCCAGCATCAGGGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: PLQHFPCQVATAASHRNLLSLFR*PASGGL Trigger: CAGTCCCCCTGATGCTGGCAATCTGAAGAGAGAGAG...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR TCA 72 bp | AAAACAGCTGAGACATCCCTAGACAATGGTAACCTGTaGGACCTGTTTCCAAGCCAACTCCTAGTCGCTATC | + |
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Preference number: 3 (lower is better) Translates to: KTAETSLDNGNL*DLFPSQLLVAI Trigger: GATAGCGACTAGGAGTTGGCTTGGAAACAGGTCTCACAGGTTACCATTGTCTAGGGATGTCTCAGCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR CCA 72 bp | AGGGTTCAGACCCACTACAACACTTCCCATGTCAAGTaGCAACAGCAGCATCTCACAGAAATCTGTACATAC | + |
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Preference number: 3 (lower is better) Translates to: RVQTHYNTSHVK*QQQHLTEICTY Trigger: GTATGTACAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGGGTCTGAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CAA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGAAAAAGGAATGCACTTaGGTTCATACCAAATGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PLQHFPCQVATAASHRNLKKECT*VHTKCP Trigger: AGGGCATTTGGTATGAACCAAAGTGCATTCCTTTTT...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR CCA 72 bp | AAGCCCTCTAAGCCACTGATTGGGGGTGCTGTCACATaGGCATCTTTATGTAACTTATTGACATATTATTGC | + |
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Preference number: 3 (lower is better) Translates to: KPSKPLIGGAVT*ASLCNLLTYYC Trigger: GCAATAATATGTCAATAAGTTACATAAAGATGCCCATGTGACAGCACCCCCAATCAGTGGCTTAGAGGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CAA 90 bp | TTACCTAACTCTCAGTTACTCTCTCAGGTAAAGCGTCATTCCCCACAAAAACACGTCAGGCCATTTAACTaGACATTGGAATTTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LPNSQLLSQVKRHSPQKHVRPFN*TLEFLL Trigger: GAGGAGAAATTCCAATGTCAAGTTAAATGGCCTGAC...GTGTTTTTGTGGGGAATGACGCTTTACCTGAGAGAGTAACTGAGAGTTAGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR TCA 72 bp | AAACCCAAGCCCCCGCCTAGACATAACTGCAGCAGTTaGGCTGATATAATTACAATGTATCGTATATATGTC | + |
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Preference number: 3 (lower is better) Translates to: KPKPPPRHNCSS*ADIITMYRIYV Trigger: GACATATATACGATACATTGTAATTATATCAGCTCAACTGCTGCAGTTATGTCTAGGCGGGGGCTTGGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CAA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGATTTCTAACGAAAGAGTaGATGCTTCCCCAGGCTAAG | + |
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Preference number: 3 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRFLTKE*MLPQAK Trigger: CTTAGCCTGGGGAAGCATCAACTCTTTCGTTAGAAA...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR CCA 72 bp | TCTAGATATTTAAGACAGATGTTATCTCCGCAGAGGTaGCATCCCTCTTTACTACCTCTCATTCAAAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: SRYLRQMLSPQR*HPSLLPLIQRV Trigger: AACTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCTGTCTTAAATATCTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR GCA 72 bp | CATTCAACCATTTCACATATTTTCAGTACACACAGTTaGAGCATTAATACAGTCACGTGTCTAAGGTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: HSTISHIFSTHS*SINTVTCLRCC Trigger: GCAACACCTTAGACACGTGACTGTATTAATGCTGCAACTGTGTGTACTGAAAATATGTGAAATGGTTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CAA 90 bp | GTATCAGTAAATGCTGACACGGTTTTTGTGAATAAAGGAAATTTCACTGTAGTCGAATTTCTCCTCCCTTaGCAACCCCTATTCTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: VSVNADTVFVNKGNFTVVEFLLP*QPLFFL Trigger: TAGAAAGAATAGGGGTTGCAAAGGGAGGAGAAATTC...GACTACAGTGAAATTTCCTTTATTCACAAAAACCGTGTCAGCATTTACTGATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGACCATTTAACTTGACATaGGAATTTCTCCTCCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: IQNKRHIINTKGTISPLRPFNLT*EFLLPL Trigger: CAAAGGGAGGAGAAATTCCAATGTCAAGTTAAATGG...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| 3UTR-3UTR CAA 90 bp | GTATCAGTAAATGCTGACACGGTTTTTGTGAATAAAGGAAATTTCACTGTAGTCACTATCCAAAACCTATaGTCCAAACAGGCAGAAATC | + |
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Preference number: 3 (lower is better) Translates to: VSVNADTVFVNKGNFTVVTIQNL*SKQAEI Trigger: GATTTCTGCCTGTTTGGACAATAGGTTTTGGATAGT...GACTACAGTGAAATTTCCTTTATTCACAAAAACCGTGTCAGCATTTACTGATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGGGGATCGGCCCCCGTTaGGGACCACAGAGCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LRLRQQPSENRRREPGGEGIGPR*GPQSHL Trigger: CAGATGGCTCTGTGGTCCTCAACGGGGGCCGATCCC...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGGCAACTCGAACGTCATaGAGATGTGGTTGCGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LRLRQQPSENRRREPGGEATRTS*RCGCGR Trigger: CCTTCCGCAACCACATCTGCATGACGTTCGAGTTGC...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGCTCCTAAGCCACGGGTaGCGCAAAGCCTGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PLQHFPCQVATAASHRNLLLSHG*RKAWPG Trigger: CCCGGGCCAGGCTTTGCGGCACCCGTGGCTTAGGAG...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGGCTCATAGAGGTTCATaGTCAGCAACTCGAACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLRQQPSENRRREPGGEAHRGS*SATRTS Trigger: TGACGTTCGAGTTGCTGAGCATGAACCTCTATGAGC...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAATCGGCCGCCTGCCTGTaGAAGCGCTTCTCGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKSAACL*KRFSFR Trigger: GCGGAACGAGAAGCGCTTCCACAGGCAGGCGGCCGA...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAATCTCCTCGGCCGCCTaGCTGTGGAAGCGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKISSAA*LWKRFS Trigger: CGAGAAGCGCTTCCACAGGCAGGCGGCCGAGGAGAT...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAATCAGAGAGGTGGAGCTaGCCTGCCGTCGGTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKSERWS*PAVGEC Trigger: GCATTCACCGACGGCAGGGCAGCTCCACCTCTCTGA...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR TCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAATCCCCGGGGAAGCCTaGAGCTGGCGAACGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRIPGEA*SWRTAV Trigger: CACCGCCGTTCGCCAGCTTCAGGCTTCCCCGGGGAT...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAATGGGCATGCCATACCTaGCTCCGAGGATCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKWACHT*LRGSLP Trigger: CGGAAGTGATCCTCGGAGCCAGGTATGGCATGCCCA...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGACTGCCCTGCCGTCGGTaGATGCTCTCCAGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IQNKRHIINTKGTISPLRLPCRR*MLSSCR Trigger: GCGGCAGCTGGAGAGCATTCACCGACGGCAGGGCAG...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGATCTTCAGGGCCACGTaGTGGTGGACTTTGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLQHFPCQVATAASHRNLIFRAT*WWTLWS Trigger: TGACCACAAAGTCCACCAGCACGTGGCCCTGAAGAT...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | GTATCAGTAAATGCTGACACGGTTTTTGTGAATAAAGGAAATTTCACTGTAGTCGGGTGCCGCAAAGCCTaGCCCGGGGTCATGCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VSVNADTVFVNKGNFTVVGCRKA*PGVMRT Trigger: GGTCCGCATGACCCCGGGCCAGGCTTTGCGGCACCC...GACTACAGTGAAATTTCCTTTATTCACAAAAACCGTGTCAGCATTTACTGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| 3UTR CAA 72 bp | CTCCCTTTGCAACCCCTATTCTTTCTAACGAAAGAGTaGATGCTTCCCCAGGCTAAGGGAACCTCTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLQPLFFLTKE*MLPQAKGTSVA Trigger: TGCCACAGAGGTTCCCTTAGCCTGGGGAAGCATCAACTCTTTCGTTAGAAAGAATAGGGGTTGCAAAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR TCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAAGCCCGGTAAAAGCGTaGCTGGATGTACGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKSPVKA*LDVRVD Trigger: GTCTACACGTACATCCAGTCACGCTTTTACCGGGCT...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGGGAGGTGGTCATTCATaGTGTGCTTACTGCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCYLRRGGIPLYYLSFKEGGGHS*CAYCRQ Trigger: TTGGCGGCAGTAAGCACACCATGAATGACCACCTCC...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGCATAACCACCATTGTTaGGTCCACCGGTCATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLQHFPCQVATAASHRNLHNHHC*VHRSCL Trigger: AAGGCATGACCGGTGGACCCAACAATGGTGGTTATG...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAACACTGCAGAATGGAGTaGGCAAACTTGCGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKHCRME*ANLRTR Trigger: TCTGGTGCGCAAGTTTGCCCACTCCATTCTGCAGTG...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| 3UTR CAA 72 bp | CACAAAAGTTCCGCTGGCATCTACGAAGAACCAGTTTaGTGTGGTGGGGGAAAGGCAAACCATCTTAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKSSAGIYEEPV*CGGGKANHLSP Trigger: TGGACTAAGATGGTTTGCCTTTCCCCCACCACACAAAACTGGTTCTTCGTAGATGCCAGCGGAACTTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR TCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGCATTGGGCTGTGTTGTaGGCACTGTCCTTTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQHFPCQVATAASHRNLHWAVL*ALSFCY Trigger: GTAACAAAAGGACAGTGCTCACAACACAGCCCAATG...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR TCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAGACCACAGAGCCATCTaGAAGAGTCGTAACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKDHRAI*KSRNCA Trigger: TGCACAGTTACGACTCTTTCAGATGGCTCTGTGGTC...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAATGGTCATTCATGGTGTaGTTACTGCCGCCAATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKWSFMV*LLPPIV Trigger: CACGATTGGCGGCAGTAAGCACACCATGAATGACCA...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTCCTGCCGTCGGTGAATaGTCTCCAGCTGCCGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TALCWAILKPLPTESVDFPAVGE*SPAAAR Trigger: CCGAGCGGCAGCTGGAGAGCATTCACCGACGGCAGG...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAACCACCGGTCATGCCTTaGCGTTTCTTTGCATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKPPVMP*RFFAFG Trigger: TCCAAATGCAAAGAAACGCCAAGGCATGACCGGTGG...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAGGAGTTCCGCGAGGATaGAACCCAGGCTCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRGVPRG*NPGSTC Trigger: ACATGTGGAGCCTGGGTTGCATCCTCGCGGAACTCC...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGGGCAGGCTGAAGCCCTaGAACTTATTCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RCYLRRGGIPLYYLSFKEGRLKP*NLFFLM Trigger: CATCAAGAAGAATAAGTTCCAGGGCTTCAGCCTGCC...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | TTACCTAACTCTCAGTTACTCTCTCAGGTAAAGCGTCATTCCCCACAAAAACACCCAAGCACTGCAGAATaGAGTGGGCAAACTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPNSQLLSQVKRHSPQKHPSTAE*SGQTCA Trigger: TGCGCAAGTTTGCCCACTCCATTCTGCAGTGCTTGG...GTGTTTTTGTGGGGAATGACGCTTTACCTGAGAGAGTAACTGAGAGTTAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGGCTGAATATTCCCATTaGCATCTGTCATCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLQHFPCQVATAASHRNLAEYSH*HLSSVP Trigger: TGGCACAGATGACAGATGCCAATGGGAATATTCAGC...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR TCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAGGTGTTCGAAGGCTGTaGGTTTTTGCATGTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKGVRRL*VFACIA Trigger: AGCAATACATGCAAAAACTCACAGCCTTCGAACACC...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR TCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAGCATCCAGGAGTTTCTaGGAGGGCATGCCCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRASRSF*EGMPKS Trigger: GCTTTTGGGCATGCCCTCTCAGAAACTCCTGGATGC...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGCTGCTTCGACCCTGCTaGTTTAACAAAATGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCYLRRGGIPLYYLSFKELLRPC*FNKMFS Trigger: CGAGAACATTTTGTTAAAGCAGCAGGGTCGAAGCAG...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAATCGCATCCCTTCAGTaGGTTCCCCCACTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRIASLQ*VPPLSA Trigger: AGCAGAGAGTGGGGGAACGCACTGAAGGGATGCGAT...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTTGGACTTCAGAGAGGTaGAGCTGCCCTGCCGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TALCWAILKPLPTESVDFWTSER*SCPAVG Trigger: ACCGACGGCAGGGCAGCTCCACCTCTCTGAAGTCCA...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGATACTGCTTCGACCCTaGTGCTTTAACAAAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQHFPCQVATAASHRNLILLRP*CFNKMF Trigger: GAACATTTTGTTAAAGCAGCAGGGTCGAAGCAGTAT...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | TTACCTAACTCTCAGTTACTCTCTCAGGTAAAGCGTCATTCCCCACAAAAACACGGCATCTGTCATCTGTaGCAAGTTAGTCCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPNSQLLSQVKRHSPQKHGICHL*QVSPQL Trigger: AAGCTGAGGACTAACTTGGCACAGATGACAGATGCC...GTGTTTTTGTGGGGAATGACGCTTTACCTGAGAGAGTAACTGAGAGTTAGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CCA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGGGCTTAAGGTCACAGTaGATTATTCTGTTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCYLRRGGIPLYYLSFKEGLRSQ*IILFLC Trigger: GCACAAGAACAGAATAATCCACTGTGACCTTAAGCC...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAAGCTCACGAAATTTTTaGCTCGTTTGGAAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKSSRNF*LVWKHP Trigger: TGGATGCTTCCAAACGAGCCAAAAATTTCGTGAGCT...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGATGTGGTTGCGGAAGGTaGAGTTCTCCAGCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQNKRHIINTKGTISPLRCGCGR*SSPACG Trigger: TCCACATGCTGGAGAACTTCACCTTCCGCAACCACA...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | TTACCTAACTCTCAGTTACTCTCTCAGGTAAAGCGTCATTCCCCACAAAAACACGCCTTGGCGTTTCTTTaGATTTGGACCCAAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPNSQLLSQVKRHSPQKHALAFL*IWTQEV Trigger: TACTTCTTGGGTCCAAATGCAAAGAAACGCCAAGGC...GTGTTTTTGTGGGGAATGACGCTTTACCTGAGAGAGTAACTGAGAGTTAGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | CCACTACAACACTTCCCATGTCAAGTGGCAACAGCAGCATCTCACAGAAATCTGGCGTTTCTTTGCATTTaGACCCAAGAAGTATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQHFPCQVATAASHRNLAFLCI*TQEVYF Trigger: GAAATATACTTCTTGGGTCCAAATGCAAAGAAACGC...CAGATTTCTGTGAGATGCTGCTGTTGCCACTTGACATGGGAAGTGTTGTAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTGGCTCCACATGTCTATaGGCATGCCATACCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TALCWAILKPLPTESVDFGSTCL*ACHTWL Trigger: GAGCCAGGTATGGCATGCCCATAGACATGTGGAGCC...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAAATTTTTGGCTCGTTTaGAAGCATCCAGGAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGNFLGLAGDRALSTCKNFWLV*KHPGVS Trigger: AGAAACTCCTGGATGCTTCCAAACGAGCCAAAAATT...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGACTTTTACCTTCCCCATaGCTTCCATGGACTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRLLPSP*LPWTSE Trigger: CTCTGAAGTCCATGGAAGGCATGGGGAAGGTAAAAG...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGACTGTTGAGGTGGAGGTaGTCATTCATGGTGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRLLRWR*SFMVCL Trigger: TAAGCACACCATGAATGACCACCTCCACCTCAACAG...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTGCTTGGAAGCTGAACTaGAGGGTGGAGGTAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TALCWAILKPLPTESVDFAWKLN*RVEVTW Trigger: CCAAGTTACCTCCACCCTCCAGTTCAGCTTCCAAGC...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGAAAAGCATCCAAGCACTaGAGAATGGAGTGGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQNKRHIINTKGTISPLRKASKH*RMEWAN Trigger: GTTTGCCCACTCCATTCTGCAGTGCTTGGATGCTTT...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGAAACACTGTCCTCTGCTaGATATTCCCATTGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IQNKRHIINTKGTISPLRNTVLC*IFPLAS Trigger: AGATGCCAATGGGAATATTCAGCAGAGGACAGTGTT...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAAAGTTCTCCAGCATGTaGATGACGTTCATAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRKFSSM*MTFIVL Trigger: CAACACTATGAACGTCATCCACATGCTGGAGAACTT...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR CCA 90 bp | GTATCAGTAAATGCTGACACGGTTTTTGTGAATAAAGGAAATTTCACTGTAGTCAACGTCATGCAGATGTaGTTGCGGAAGGTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVNADTVFVNKGNFTVVNVMQM*LRKVKF Trigger: GAACTTCACCTTCCGCAACCACATCTGCATGACGTT...GACTACAGTGAAATTTCCTTTATTCACAAAAACCGTGTCAGCATTTACTGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGAAGTTTTTGCATGTATTaGTTCATCGCTTGTTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQNKRHIINTKGTISPLRSFCMY*FIACSG Trigger: GCCCGAACAAGCGATGAAGCAATACATGCAAAAACT...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS-3UTR GCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAAAGGCTGTGAGTTTTTaGATGTATTGCTTCATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRKAVSF*MYCFIA Trigger: AGCGATGAAGCAATACATGCAAAAACTCACAGCCTT...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR GCA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAATTATTCTGTTCTTGTaGAAAGCATCCAAGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSDNSRLMVSIKAYKSRIILFL*KASKHC Trigger: GCAGTGCTTGGATGCTTTGCACAAGAACAGAATAAT...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 90 bp | TTCTCTCCGGTCGGAGGCTTTGGCAAGCGCCTCCTAAGCCACGGGTaGCGCAAAGCCTGGCCCGGGGTCATGCGGACCGCGGGATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSPVGGFGKRLLSHG*RKAWPGVMRTAGSH Trigger: GTGGGATCCCGCGGTCCGCATGACCCCGGGCCAGGCTTTGCGGCACCCGTGGCTTAGGAGGCGCTTGCCAAAGCCTCCGACCGGAGAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 90 bp | GGAGGCTTTGGCAAGCGCCTCCTAAGCCACGGGTGCCGCAAAGCCTaGCCCGGGGTCATGCGGACCGCGGGATCCCACTCCAAACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGFGKRLLSHGCRKA*PGVMRTAGSHSKHC Trigger: ACAGTGTTTGGAGTGGGATCCCGCGGTCCGCATGACCCCGGGCCAGGCTTTGCGGCACCCGTGGCTTAGGAGGCGCTTGCCAAAGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 90 bp | CTTCCATGGACTTCAGAGAGGTGGAGCTGCCCTGCCGTCGGTGAATaGTCTCCAGCTGCCGCTCGGGCACCCCAGGCAAGCCTGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPWTSERWSCPAVGE*SPAAARAPQASLSC Trigger: GCAAGACAGGCTTGCCTGGGGTGCCCGAGCGGCAGCTGGAGAGCATTCACCGACGGCAGGGCAGCTCCACCTCTCTGAAGTCCATGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 90 bp | GGGAGGCTTTTACCTTCCCCATGCCTTCCATGGACTTCAGAGAGGTaGAGCTGCCCTGCCGTCGGTGAATGCTCTCCAGCTGCCGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRLLPSPCLPWTSER*SCPAVGECSPAAAR Trigger: CCGAGCGGCAGCTGGAGAGCATTCACCGACGGCAGGGCAGCTCCACCTCTCTGAAGTCCATGGAAGGCATGGGGAAGGTAAAAGCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGATGGAGTGGGCAAACTaGCGCACCAGAGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRLRQQPSENRRREPGGEMEWAN*RTRGRL Trigger: CAGCCTGCCTCTGGTGCGCAAGTTTGCCCACTCCAT...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGGTATTGCTTCATCGCTaGTTCGGGCGTCATGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRLRQQPSENRRREPGGEVLLHR*FGRHGG Trigger: TCCCCCATGACGCCCGAACAAGCGATGAAGCAATAC...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 90 bp | TTTCCCTCTCCGGGATCGGCCCCCGTTGAGGACCACAGAGCCATCTaGAAGAGTCGTAACTGTGCAGTATCGGGGGTAACCCTTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPSPGSAPVEDHRAI*KSRNCAVSGVTLGA Trigger: AGCTCCAAGGGTTACCCCCGATACTGCACAGTTACGACTCTTTCAGATGGCTCTGTGGTCCTCAACGGGGGCCGATCCCGGAGAGGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGGTCATGCAGATGTGGTaGCGGAAGGTGAAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLRQQPSENRRREPGGEVMQMW*RKVKFS Trigger: GGAGAACTTCACCTTCCGCAACCACATCTGCATGAC...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | CTCAGGCTCAGGCAGCAACCAAGTGAGAACAGAAGAAGGGAGCCTGGCGGGGAGGTACGTGTAGACGCGTaGGTGCTCGTAACAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRLRQQPSENRRREPGGEVRVDA*VLVTTG Trigger: TCCAGTTGTTACGAGCACCAACGCGTCTACACGTAC...CTCCCCGCCAGGCTCCCTTCTTCTGTTCTCACTTGGTTGCTGCCTGAGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 90 bp | TGGATCTGTCCGTGGCTGTTGAGGTGGAGGTGGTCATTCATGGTGTaGTTACTGCCGCCAATCGTGTGGGCTGTAGTGGTAGCGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WICPWLLRWRWSFMV*LLPPIVWAVVVALL Trigger: CAGCAACGCTACCACTACAGCCCACACGATTGGCGGCAGTAAGCACACCATGAATGACCACCTCCACCTCAACAGCCACGGACAGATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGGCTGTAGTGGTAGCGTaGCTGGCCCGGAGAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RCYLRRGGIPLYYLSFKEAVVVA*LARRGG Trigger: GCCGCCTCTCCGGGCCAGCAACGCTACCACTACAGC...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 90 bp | TATTATCCTCGAACAGCTGCTGAACCTGGATCTGTCCGTGGCTGTTaGGGTGGAGGTGGTCATTCATGGTGTGCTTACTGCCGCCAATCG | + |
|
Preference number: 5 (lower is better) Translates to: YYPRTAAEPGSVRGC*GGGGHSWCAYCRQS Trigger: CGATTGGCGGCAGTAAGCACACCATGAATGACCACCTCCACCTCAACAGCCACGGACAGATCCAGGTTCAGCAGCTGTTCGAGGATAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 90 bp | GAGCTCACGAAATTTTTGGCTCGTTTGGAAGCATCCAGGAGTTTCTaGGAGGGCATGCCCAAAAGCTCGATCATACAAGCCAGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELTKFLARLEASRSF*EGMPKSSIIQASWS Trigger: GGACCAGCTGGCTTGTATGATCGAGCTTTTGGGCATGCCCTCTCAGAAACTCCTGGATGCTTCCAAACGAGCCAAAAATTTCGTGAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 90 bp | GTTGTGAGCACTGTCCTTTTGTTACTATTATCCTCGAACAGCTGCTaGACCTGGATCTGTCCGTGGCTGTTGAGGTGGAGGTGGTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VVSTVLLLLLSSNSC*TWICPWLLRWRWSF Trigger: GAATGACCACCTCCACCTCAACAGCCACGGACAGATCCAGGTTCAGCAGCTGTTCGAGGATAATAGTAACAAAAGGACAGTGCTCACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 90 bp | AACGTCATGCAGATGTGGTTGCGGAAGGTGAAGTTCTCCAGCATGTaGATGACGTTCATAGTGTTGTCCTTGTCCTGCTTCCGTAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NVMQMWLRKVKFSSM*MTFIVLSLSCFRRC Trigger: ACACCTACGGAAGCAGGACAAGGACAACACTATGAACGTCATCCACATGCTGGAGAACTTCACCTTCCGCAACCACATCTGCATGACGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | TTACCTAACTCTCAGTTACTCTCTCAGGTAAAGCGTCATTCCCCACAAAAACACATCTGTCCGTGGCTGTaGAGGTGGAGGTGGTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LPNSQLLSQVKRHSPQKHICPWL*RWRWSF Trigger: GAATGACCACCTCCACCTCAACAGCCACGGACAGAT...GTGTTTTTGTGGGGAATGACGCTTTACCTGAGAGAGTAACTGAGAGTTAGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | ACAGCATTATGTTGGGCAATATTAAAACCTTTACCAACCGAATCCGTTGATTTTCGGGATCGGCCCCCGTaGAGGACCACAGAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TALCWAILKPLPTESVDFRDRPP*RTTEPS Trigger: AGATGGCTCTGTGGTCCTCAACGGGGGCCGATCCCG...AAAATCAACGGATTCGGTTGGTAAAGGTTTTAATATTGCCCAACATAATGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 90 bp | ACCATTGTTGGGTCCACCGGTCATGCCTTGGCGTTTCTTTGCATTTaGACCCAAGAAGTATATTTCAGGGTAGCTAAAAATCTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TIVGSTGHALAFLCI*TQEVYFRVAKNLMV Trigger: CACCATGAGATTTTTAGCTACCCTGAAATATACTTCTTGGGTCCAAATGCAAAGAAACGCCAAGGCATGACCGGTGGACCCAACAATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 90 bp | ATAACCACCATTGTTGGGTCCACCGGTCATGCCTTGGCGTTTCTTTaGATTTGGACCCAAGAAGTATATTTCAGGGTAGCTAAAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ITTIVGSTGHALAFL*IWTQEVYFRVAKNL Trigger: GAGATTTTTAGCTACCCTGAAATATACTTCTTGGGTCCAAATGCAAAGAAACGCCAAGGCATGACCGGTGGACCCAACAATGGTGGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | TTAACCGGAAACTTTCTTGGCCTCGCTGGGGACCGTGCTTTAAGTACTTGTAAAGTGAGCACTGTCCTTTaGTTACTATTATCCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTGNFLGLAGDRALSTCKVSTVL*LLLSSN Trigger: GTTCGAGGATAATAGTAACAAAAGGACAGTGCTCAC...TTTACAAGTACTTAAAGCACGGTCCCCAGCGAGGCCAAGAAAGTTTCCGGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | AGATGTTATCTCCGCAGAGGTGGCATCCCTCTTTACTACCTCTCATTCAAAGAGAAATTTTTGGCTCGTTaGGAAGCATCCAGGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCYLRRGGIPLYYLSFKEKFLAR*EASRSF Trigger: GAAACTCCTGGATGCTTCCAAACGAGCCAAAAATTT...CTCTTTGAATGAGAGGTAGTAAAGAGGGATGCCACCTCTGCGGAGATAACATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | GCATCCAGTGACAATTCACGCCTTATGGTTTCTATTAAGGCCTATAAATCTAGAGAGTTTTTGCATGTATaGCTTCATCGCTTGTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSDNSRLMVSIKAYKSREFLHV*LHRLFG Trigger: CCCGAACAAGCGATGAAGCAATACATGCAAAAACTC...TCTAGATTTATAGGCCTTAATAGAAACCATAAGGCGTGAATTGTCACTGGATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | ATTCAGAACAAAAGGCACATTATTAACACTAAGGGCACAATTTCTCCTCTACGATGCCTTGGCGTTTCTTaGCATTTGGACCCAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IQNKRHIINTKGTISPLRCLGVS*HLDPRS Trigger: ACTTCTTGGGTCCAAATGCAAAGAAACGCCAAGGCA...TCGTAGAGGAGAAATTGTGCCCTTAGTGTTAATAATGTGCCTTTTGTTCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | GTATCAGTAAATGCTGACACGGTTTTTGTGAATAAAGGAAATTTCACTGTAGTCTTCATAGTGTTGTCCTaGTCCTGCTTCCGTAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSVNADTVFVNKGNFTVVFIVLS*SCFRRC Trigger: ACACCTACGGAAGCAGGACAAGGACAACACTATGAA...GACTACAGTGAAATTTCCTTTATTCACAAAAACCGTGTCAGCATTTACTGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | GTATCAGTAAATGCTGACACGGTTTTTGTGAATAAAGGAAATTTCACTGTAGTCATGACGTTCATAGTGTaGTCCTTGTCCTGCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSVNADTVFVNKGNFTVVMTFIV*SLSCFR Trigger: ACGGAAGCAGGACAAGGACAACACTATGAACGTCAT...GACTACAGTGAAATTTCCTTTATTCACAAAAACCGTGTCAGCATTTACTGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS-3UTR CAA 90 bp | GTATCAGTAAATGCTGACACGGTTTTTGTGAATAAAGGAAATTTCACTGTAGTCGAGCTCACGAAATTTTaGGCTCGTTTGGAAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VSVNADTVFVNKGNFTVVELTKF*ARLEAS Trigger: GGATGCTTCCAAACGAGCCAAAAATTTCGTGAGCTC...GACTACAGTGAAATTTCCTTTATTCACAAAAACCGTGTCAGCATTTACTGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 72 bp | GGCAAGCGCCTCCTAAGCCACGGGTGCCGCAAAGCCTaGCCCGGGGTCATGCGGACCGCGGGATCCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GKRLLSHGCRKA*PGVMRTAGSHS Trigger: GGAGTGGGATCCCGCGGTCCGCATGACCCCGGGCCAGGCTTTGCGGCACCCGTGGCTTAGGAGGCGCTTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 72 bp | GTCGGAGGCTTTGGCAAGCGCCTCCTAAGCCACGGGTaGCGCAAAGCCTGGCCCGGGGTCATGCGGACCGCG | + |
|
Preference number: 6 (lower is better) Translates to: VGGFGKRLLSHG*RKAWPGVMRTA Trigger: CGCGGTCCGCATGACCCCGGGCCAGGCTTTGCGGCACCCGTGGCTTAGGAGGCGCTTGCCAAAGCCTCCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 90 bp | ATGGTGTGCTTACTGCCGCCAATCGTGTGGGCTGTAGTGGTAGCGTaGCTGGCCCGGAGAGGCGGCAGGGCGATGGGGGAGGGCGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: MVCLLPPIVWAVVVA*LARRGGRAMGEGGP Trigger: CGGCCCGCCCTCCCCCATCGCCCTGCCGCCTCTCCGGGCCAGCAACGCTACCACTACAGCCCACACGATTGGCGGCAGTAAGCACACCAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 72 bp | ATGGACTTCAGAGAGGTGGAGCTGCCCTGCCGTCGGTaGATGCTCTCCAGCTGCCGCTCGGGCACCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MDFREVELPCRR*MLSSCRSGTPG Trigger: GCCTGGGGTGCCCGAGCGGCAGCTGGAGAGCATTCACCGACGGCAGGGCAGCTCCACCTCTCTGAAGTCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 72 bp | ACTTCAGAGAGGTGGAGCTGCCCTGCCGTCGGTGAATaGTCTCCAGCTGCCGCTCGGGCACCCCAGGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSERWSCPAVGE*SPAAARAPQAS Trigger: GCTTGCCTGGGGTGCCCGAGCGGCAGCTGGAGAGCATTCACCGACGGCAGGGCAGCTCCACCTCTCTGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 72 bp | TTACTGCCGCCAATCGTGTGGGCTGTAGTGGTAGCGTaGCTGGCCCGGAGAGGCGGCAGGGCGATGGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPPIVWAVVVA*LARRGGRAMGE Trigger: CTCCCCCATCGCCCTGCCGCCTCTCCGGGCCAGCAACGCTACCACTACAGCCCACACGATTGGCGGCAGTAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 72 bp | TCCAGCTGCCGCTCGGGCACCCCAGGCAAGCCTGTCTaGCCCACCGTCGTAAGCCCATTGGGCTGTGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSCRSGTPGKPV*PTVVSPLGCVV Trigger: CACAACACAGCCCAATGGGCTTACGACGGTGGGCAAGACAGGCTTGCCTGGGGTGCCCGAGCGGCAGCTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 72 bp | CCTCTTCACCGCTGTCTTCTCTCCGGTCGGAGGCTTTaGCAAGCGCCTCCTAAGCCACGGGTGCCGCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLHRCLLSGRRL*QAPPKPRVPQS Trigger: GCTTTGCGGCACCCGTGGCTTAGGAGGCGCTTGCCAAAGCCTCCGACCGGAGAGAAGACAGCGGTGAAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 72 bp | GGTCATCGCATCCCTTCAGTGCGTTCCCCCACTCTCTaGTCTCTGGCGGACCCCTTAGTTTCCCTCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHRIPSVRSPTL*SLADPLVSLSG Trigger: CCCGGAGAGGGAAACTAAGGGGTCCGCCAGAGAGCAGAGAGTGGGGGAACGCACTGAAGGGATGCGATGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 72 bp | CCGGGATCGGCCCCCGTTGAGGACCACAGAGCCATCTaGAAGAGTCGTAACTGTGCAGTATCGGGGGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: PGSAPVEDHRAI*KSRNCAVSGVT Trigger: GGTTACCCCCGATACTGCACAGTTACGACTCTTTCAGATGGCTCTGTGGTCCTCAACGGGGGCCGATCCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 90 bp | CTCTCTGGCGGACCCCTTAGTTTCCCTCTCCGGGATCGGCCCCCGTaGAGGACCACAGAGCCATCTGAAAGAGTCGTAACTGTGCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LSGGPLSFPLRDRPP*RTTEPSERVVTVQY Trigger: ATACTGCACAGTTACGACTCTTTCAGATGGCTCTGTGGTCCTCAACGGGGGCCGATCCCGGAGAGGGAAACTAAGGGGTCCGCCAGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 72 bp | GGACCCCTTAGTTTCCCTCTCCGGGATCGGCCCCCGTaGAGGACCACAGAGCCATCTGAAAGAGTCGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: GPLSFPLRDRPP*RTTEPSERVVT Trigger: AGTTACGACTCTTTCAGATGGCTCTGTGGTCCTCAACGGGGGCCGATCCCGGAGAGGGAAACTAAGGGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 72 bp | CCGTGGCTGTTGAGGTGGAGGTGGTCATTCATGGTGTaGTTACTGCCGCCAATCGTGTGGGCTGTAGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PWLLRWRWSFMV*LLPPIVWAVVV Trigger: TACCACTACAGCCCACACGATTGGCGGCAGTAAGCACACCATGAATGACCACCTCCACCTCAACAGCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 90 bp | TCGGGCACCCCAGGCAAGCCTGTCTTGCCCACCGTCGTAAGCCCATaGGGCTGTGTTGTGAGCACTGTCCTTTTGTTACTATTATCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGTPGKPVLPTVVSP*GCVVSTVLLLLLSS Trigger: CGAGGATAATAGTAACAAAAGGACAGTGCTCACAACACAGCCCAATGGGCTTACGACGGTGGGCAAGACAGGCTTGCCTGGGGTGCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 72 bp | CTCGTTTGGAAGCATCCAGGAGTTTCTGAGAGGGCATaGCCAAAAGCTCGATCATACAAGCCAGCTGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVWKHPGVSERA*PKARSYKPAGP Trigger: GGGACCAGCTGGCTTGTATGATCGAGCTTTTGGGCATGCCCTCTCAGAAACTCCTGGATGCTTCCAAACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 72 bp | CGTACGATCCCTGGTCGTCGTCATAACCACCATTGTTaGGTCCACCGGTCATGCCTTGGCGTTTCTTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RTIPGRRHNHHC*VHRSCLGVSLH Trigger: ATGCAAAGAAACGCCAAGGCATGACCGGTGGACCCAACAATGGTGGTTATGACGACGACCAGGGATCGTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS CAA 72 bp | CCAGGCAAGCCTGTCTTGCCCACCGTCGTAAGCCCATaGGGCTGTGTTGTGAGCACTGTCCTTTTGTTACTA | + |
|
Preference number: 6 (lower is better) Translates to: PGKPVLPTVVSP*GCVVSTVLLLL Trigger: TAGTAACAAAAGGACAGTGCTCACAACACAGCCCAATGGGCTTACGACGGTGGGCAAGACAGGCTTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS CAA 72 bp | AAAGCATCCAAGCACTGCAGAATGGAGTGGGCAAACTaGCGCACCAGAGGCAGGCTGAAGCCCTGGAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: KASKHCRMEWAN*RTRGRLKPWNL Trigger: TAAGTTCCAGGGCTTCAGCCTGCCTCTGGTGCGCAAGTTTGCCCACTCCATTCTGCAGTGCTTGGATGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS CAA 72 bp | CTCATGGTGTTCGAAGGCTGTGAGTTTTTGCATGTATaGCTTCATCGCTTGTTCGGGCGTCATGGGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LMVFEGCEFLHV*LHRLFGRHGGG Trigger: GCCTCCCCCATGACGCCCGAACAAGCGATGAAGCAATACATGCAAAAACTCACAGCCTTCGAACACCATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS GCA 72 bp | TCATGGTGTTCGAAGGCTGTGAGTTTTTGCATGTATTaGTTCATCGCTTGTTCGGGCGTCATGGGGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SWCSKAVSFCMY*FIACSGVMGEA Trigger: AGCCTCCCCCATGACGCCCGAACAAGCGATGAAGCAATACATGCAAAAACTCACAGCCTTCGAACACCATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
||
| CDS CCA 72 bp | GGTAACCCTTGGAGCTCACGAAATTTTTGGCTCGTTTaGAAGCATCCAGGAGTTTCTGAGAGGGCATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GNPWSSRNFWLV*KHPGVSERACP Trigger: TGGGCATGCCCTCTCAGAAACTCCTGGATGCTTCCAAACGAGCCAAAAATTTCGTGAGCTCCAAGGGTTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 90 bp | AAGTTAGTCCTCAGCTTGGAAGCTGAACTGGAGGGTGGAGGTAACTaGGAAATGGAGGTGATAGCACCAGTACTCTCTGTGACCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KLVLSLEAELEGGGN*EMEVIAPVLSVTLF Trigger: GAAGAGGGTCACAGAGAGTACTGGTGCTATCACCTCCATTTCCAAGTTACCTCCACCCTCCAGTTCAGCTTCCAAGCTGAGGACTAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 72 bp | ACTGTCCTTTTGTTACTATTATCCTCGAACAGCTGCTaGACCTGGATCTGTCCGTGGCTGTTGAGGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TVLLLLLSSNSC*TWICPWLLRWR Trigger: CCTCCACCTCAACAGCCACGGACAGATCCAGGTTCAGCAGCTGTTCGAGGATAATAGTAACAAAAGGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 72 bp | CAGATGTGGTTGCGGAAGGTGAAGTTCTCCAGCATGTaGATGACGTTCATAGTGTTGTCCTTGTCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QMWLRKVKFSSM*MTFIVLSLSCF Trigger: GAAGCAGGACAAGGACAACACTATGAACGTCATCCACATGCTGGAGAACTTCACCTTCCGCAACCACATCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 72 bp | AGTATCGGGGGTAACCCTTGGAGCTCACGAAATTTTTaGCTCGTTTGGAAGCATCCAGGAGTTTCTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SIGGNPWSSRNF*LVWKHPGVSER Trigger: CCTCTCAGAAACTCCTGGATGCTTCCAAACGAGCCAAAAATTTCGTGAGCTCCAAGGGTTACCCCCGATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS TCA 72 bp | AAATTTTTGGCTCGTTTGGAAGCATCCAGGAGTTTCTaGGAGGGCATGCCCAAAAGCTCGATCATACAAGCC | + |
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Preference number: 6 (lower is better) Translates to: KFLARLEASRSF*EGMPKSSIIQA Trigger: GGCTTGTATGATCGAGCTTTTGGGCATGCCCTCTCAGAAACTCCTGGATGCTTCCAAACGAGCCAAAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 72 bp | ATTGTTGGGTCCACCGGTCATGCCTTGGCGTTTCTTTaGATTTGGACCCAAGAAGTATATTTCAGGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: IVGSTGHALAFL*IWTQEVYFRVA Trigger: AGCTACCCTGAAATATACTTCTTGGGTCCAAATGCAAAGAAACGCCAAGGCATGACCGGTGGACCCAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CAA 72 bp | TTCTCGGGCTTAAGGTCACAGTGGATTATTCTGTTCTaGTGCAAAGCATCCAAGCACTGCAGAATGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: FSGLRSQWIILF*CKASKHCRMEW Trigger: CCACTCCATTCTGCAGTGCTTGGATGCTTTGCACAAGAACAGAATAATCCACTGTGACCTTAAGCCCGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS CCA 72 bp | GGGTCCACCGGTCATGCCTTGGCGTTTCTTTGCATTTaGACCCAAGAAGTATATTTCAGGGTAGCTAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: GSTGHALAFLCI*TQEVYFRVAKN Trigger: ATTTTTAGCTACCCTGAAATATACTTCTTGGGTCCAAATGCAAAGAAACGCCAAGGCATGACCGGTGGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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| CDS GCA 72 bp | CTAAAAATCTCATGGTGTTCGAAGGCTGTGAGTTTTTaGATGTATTGCTTCATCGCTTGTTCGGGCGTCATG | + |
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Preference number: 6 (lower is better) Translates to: LKISWCSKAVSF*MYCFIACSGVM Trigger: CATGACGCCCGAACAAGCGATGAAGCAATACATGCAAAAACTCACAGCCTTCGAACACCATGAGATTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004281.10 |
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