Pregenerated sensors for DYNLT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028523Ensembl transcript IDs: ENSMUST00000030248.12, ENSMUST00000116317.9, ENSMUST00000125417.9, ENSMUST00000140654.9, ENSMUST00000169211.3, ENSMUST00000220547.2, ENSMUST00000223169.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTACTGAGGGAAACGTTGTTCTCTCTGCTCTGTGCCTGTGCTCCATaGCGTAAGCTTTCAGCACCCTGCTCCAGCCGCTGTGCCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: VLRETLFSLLCACAP*RKLSAPCSSRCACC Trigger: GCAGCAGGCACAGCGGCTGGAGCAGGGTGCTGAAAGCTTACGTCATGGAGCACAGGCACAGAGCAGAGAGAACAACGTTTCCCTCAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| 3UTR TCA 90 bp | CCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTTCCAGTTGTTTaGAATCTTCATCTTGTCTCTTTCCCACAGGTTTTGCCAGTAGAA | + |
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Preference number: 1 (lower is better) Translates to: PLHQSSRERPKLPVV*NLHLVSFPQVLPVE Trigger: TTCTACTGGCAAAACCTGTGGGAAAGAGACAAGATGAAGATTTCAAACAACTGGAAGCTTTGGTCGCTCTCGTGAGGACTGGTGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR GCA 90 bp | CAGATGACTTGCCATCCTAGAGCAATGGCACAGCGTCATTTCACATaGACACAAAGACTTGAAAGCCCCATAAAGATAAACGATCCATGC | + |
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Preference number: 1 (lower is better) Translates to: QMTCHPRAMAQRHFT*TQRLESPIKINDPC Trigger: GCATGGATCGTTTATCTTTATGGGGCTTTCAAGTCTTTGTGTGCATGTGAAATGACGCTGTGCCATTGCTCTAGGATGGCAAGTCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR CCA 90 bp | TTTGTAAAGTGCTGGCAACCCACAAGAGCGTCTAGATTTAGCCAGTaGCCCCACGGGACCATGGTAATTATTACGAAATCATTAATTCTA | + |
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Preference number: 1 (lower is better) Translates to: FVKCWQPTRASRFSQ*PHGTMVIITKSLIL Trigger: TAGAATTAATGATTTCGTAATAATTACCATGGTCCCGTGGGGCCACTGGCTAAATCTAGACGCTCTTGTGGGTTGCCAGCACTTTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR CCA 90 bp | TTTCAGCCCTGTAAACGTCAATGTCCATACATTCAGAAACCTCACTaGGTCGTTTTTAGTGCTAAACTCAGAGGAACAAAATGGCAAACA | + |
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Preference number: 1 (lower is better) Translates to: FQPCKRQCPYIQKPH*VVFSAKLRGTKWQT Trigger: TGTTTGCCATTTTGTTCCTCTGAGTTTAGCACTAAAAACGACCCAGTGAGGTTTCTGAATGTATGGACATTGACGTTTACAGGGCTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR TCA 90 bp | GCAGTACTAAGGCCTATTCATATTCACCATTTTTGTGTGTCATGTTaGATTATCCTATGTGGATATATCCTGTGTGGTATATATCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: AVLRPIHIHHFCVSC*IILCGYILCGIYPE Trigger: CTCTGGATATATACCACACAGGATATATCCACATAGGATAATTCAACATGACACACAAAAATGGTGAATATGAATAGGCCTTAGTACTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR GCA 90 bp | TATCCTATGTGGATATATCCTGTGTGGTATATATCCAGAGTATGTTaGCATTTATTTCTAGAAGTTTACCAGAAAGTGGTCCAGGAAATT | + |
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Preference number: 1 (lower is better) Translates to: YPMWIYPVWYISRVC*HLFLEVYQKVVQEI Trigger: AATTTCCTGGACCACTTTCTGGTAAACTTCTAGAAATAAATGGCAACATACTCTGGATATATACCACACAGGATATATCCACATAGGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR-3UTR GCA 90 bp | GATTCATCACGCTGGCTGGGCTCATCCGCGTGGGACACGGTACTGAGGGAAACGTCCAGCCGCTGTGCCTaGTGCTTGCTCCCATGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: DSSRWLGSSAWDTVLRETSSRCA*CLLPCV Trigger: GACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGA...CGTTTCCCTCAGTACCGTGTCCCACGCGGATGAGCCCAGCCAGCGTGATGAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCTTAGGCTCCCGTCCCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTCCAGTAGAACTTTTGTaGATAGAGACACACAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CFLGSRPPPPVLTRATKAPVELL*IETHSL Trigger: CAGGCTGTGTGTCTCTATTCACAAAAGTTCTACTGG...AGCTTTGGTCGCTCTCGTGAGGACTGGTGGAGGGGGACGGGAGCCTAAGAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR-3UTR TCA 90 bp | AACAAACAGGACCTGTTTCTTAGGCTCCCGTCCCCCTCCACCAGTCCTCACGAGCCAGTAGAACTTTTGTaGATAGAGACACACAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NKQDLFLRLPSPSTSPHEPVELL*IETHSL Trigger: CAGGCTGTGTGTCTCTATTCACAAAAGTTCTACTGG...CTCGTGAGGACTGGTGGAGGGGGACGGGAGCCTAAGAAACAGGTCCTGTTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR-3UTR TCA 90 bp | GCCATCCTAGAGCAATGGCACAGCGTCATTTCACATGCACACAAAGACTTGAAAGCATCTACATTTATGTaGATGGCACTGACTTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: AILEQWHSVISHAHKDLKASTFM*MALTSA Trigger: AGCAGAAGTCAGTGCCATTCACATAAATGTAGATGC...TTTCAAGTCTTTGTGTGCATGTGAAATGACGCTGTGCCATTGCTCTAGGATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR-3UTR TCA 90 bp | AGCATCTACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTCCAGTAGAACTTTTGTaGATAGAGACACACAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SIYIYVNGTDFCFEQTGPPVELL*IETHSL Trigger: CAGGCTGTGTGTCTCTATTCACAAAAGTTCTACTGG...AGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCACATGGGCTATGTGTATTTAAAGGCAGTGTCTCTTTCCAATGCATGGTATCCAGTAGAACTTTTGTaGATAGAGACACACAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KHMGYVYLKAVSLSNAWYPVELL*IETHSL Trigger: CAGGCTGTGTGTCTCTATTCACAAAAGTTCTACTGG...ATACCATGCATTGGAAAGAGACACTGCCTTTAAATACACATAGCCCATGTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATCCTAGAGCAATGGCACAGCGTCATTTCACATGCACACAAAGACTTGAAAATTCAGAAACCTCACTaGGTCGTTTTTAGTGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: AILEQWHSVISHAHKDLKIQKPH*VVFSAK Trigger: TTTAGCACTAAAAACGACCCAGTGAGGTTTCTGAAT...TTTCAAGTCTTTGTGTGCATGTGAAATGACGCTGTGCCATTGCTCTAGGATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCCATCCTAGAGCAATGGCACAGCGTCATTTCACATGCACACAAAGACTTTTTTATTTGTTAAGCTaGCAGCTTTGTATTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TCHPRAMAQRHFTCTQRLFYLLS*QLCILG Trigger: ACCCAGAATACAAAGCTGGCAGCTTAACAAATAAAA...AAGTCTTTGTGTGCATGTGAAATGACGCTGTGCCATTGCTCTAGGATGGCAAGT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR-3UTR CCA 90 bp | AAACCTCACTGGGTCGTTTTTAGTGCTAAACTCAGAGGAACAAAATGGCAAACAAATTTTGTAAAGTGCTaGCAACCCACAAGAGCGTCT | + |
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Preference number: 2 (lower is better) Translates to: KPHWVVFSAKLRGTKWQTNFVKC*QPTRAS Trigger: AGACGCTCTTGTGGGTTGCCAGCACTTTACAAAATT...TGTTTGCCATTTTGTTCCTCTGAGTTTAGCACTAAAAACGACCCAGTGAGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR-3UTR TCA 90 bp | AAACCTCACTGGGTCGTTTTTAGTGCTAAACTCAGAGGAACAAAATGGCAAACAAAGCTTCCAGTTGTTTaGAATCTTCATCTTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KPHWVVFSAKLRGTKWQTKLPVV*NLHLVS Trigger: AGAGACAAGATGAAGATTTCAAACAACTGGAAGCTT...TGTTTGCCATTTTGTTCCTCTGAGTTTAGCACTAAAAACGACCCAGTGAGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR CAA 90 bp | TGCAGTACTAAGGCCTATTCATATTCACCATTTTTGTGTGTCATGTaGAATTATCCTATGTGGATATATCCTGTGTGGTATATATCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CSTKAYSYSPFLCVM*NYPMWIYPVWYISR Trigger: TCTGGATATATACCACACAGGATATATCCACATAGGATAATTCAACATGACACACAAAAATGGTGAATATGAATAGGCCTTAGTACTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR TCA 72 bp | CACGCTGGCTGGGCTCATCCGCGTGGGACACGGTACTaGGGGAAACGTTGTTCTCTCTGCTCTGTGCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: HAGWAHPRGTRY*GKRCSLCSVPV Trigger: CACAGGCACAGAGCAGAGAGAACAACGTTTCCCTCAGTACCGTGTCCCACGCGGATGAGCCCAGCCAGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| 3UTR GCA 72 bp | CGTAAGCTTTCAGCACCCTGCTCCAGCCGCTGTGCCTaGTGCTTGCTCCCATGTGTCTGTGCCATGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RKLSAPCSSRCA*CLLPCVCAMMD Trigger: ATCCATCATGGCACAGACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGAGCAGGGTGCTGAAAGCTTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| 3UTR GCA 72 bp | AAGCTTTCAGCACCCTGCTCCAGCCGCTGTGCCTGCTaGTTGCTCCCATGTGTCTGTGCCATGATGGATAGT | + |
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Preference number: 3 (lower is better) Translates to: KLSAPCSSRCAC*LLPCVCAMMDS Trigger: ACTATCCATCATGGCACAGACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGAGCAGGGTGCTGAAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| 3UTR TCA 72 bp | GAAACGTTGTTCTCTCTGCTCTGTGCCTGTGCTCCATaGCGTAAGCTTTCAGCACCCTGCTCCAGCCGCTGT | + |
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Preference number: 3 (lower is better) Translates to: ETLFSLLCACAP*RKLSAPCSSRC Trigger: ACAGCGGCTGGAGCAGGGTGCTGAAAGCTTACGTCATGGAGCACAGGCACAGAGCAGAGAGAACAACGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGGCTCCCGTCCCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTTCCAGTTTTGAAATCTTCATCTaGTCTCTTTCCCACAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LGSRPPPPVLTRATKASSFEIFI*SLSHRF Trigger: AAACCTGTGGGAAAGAGACAAGATGAAGATTTCAAA...ACTGGAAGCTTTGGTCGCTCTCGTGAGGACTGGTGGAGGGGGACGGGAGCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR-3UTR CAA 90 bp | TGTTTCTTAGGCTCCCGTCCCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTTTTGAAATCTTCATCTaGTCTCTTTCCCACAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: CFLGSRPPPPVLTRATKAFEIFI*SLSHRF Trigger: AAACCTGTGGGAAAGAGACAAGATGAAGATTTCAAA...AGCTTTGGTCGCTCTCGTGAGGACTGGTGGAGGGGGACGGGAGCCTAAGAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR GCA 72 bp | AGAGCCAATGTTCAGTTCTCTTGTAATTTTGTAAAGTaGTGGCAACCCACAAGAGCGTCTAGATTTAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: RANVQFSCNFVK*WQPTRASRFSQ Trigger: CTGGCTAAATCTAGACGCTCTTGTGGGTTGCCAGCACTTTACAAAATTACAAGAGAACTGAACATTGGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR TCA 72 bp | AATGGCACAGCGTCATTTCACATGCACACAAAGACTTaGAAGCCCCATAAAGATAAACGATCCATGCTACAA | + |
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Preference number: 3 (lower is better) Translates to: NGTASFHMHTKT*KPHKDKRSMLQ Trigger: TTGTAGCATGGATCGTTTATCTTTATGGGGCTTTCAAGTCTTTGTGTGCATGTGAAATGACGCTGTGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR TCA 72 bp | ACTCAGAGTGATATTTTGTCAGCATCTACATTTATGTaGATGGCACTGACTTCTGCTTTGAACAAACAGGAC | + |
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Preference number: 3 (lower is better) Translates to: TQSDILSASTFM*MALTSALNKQD Trigger: GTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGATGCTGACAAAATATCACTCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR-3UTR CAA 90 bp | ATCTACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGTTTTTGAAATCTTCATCTaGTCTCTTTCCCACAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: IYIYVNGTDFCFEQTGPVFEIFI*SLSHRF Trigger: AAACCTGTGGGAAAGAGACAAGATGAAGATTTCAAA...AACAGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR-3UTR CAA 90 bp | TACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGTTTCTTTTGAAATCTTCATCTaGTCTCTTTCCCACAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: YIYVNGTDFCFEQTGPVSFEIFI*SLSHRF Trigger: AAACCTGTGGGAAAGAGACAAGATGAAGATTTCAAA...AGAAACAGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR-3UTR CAA 90 bp | TACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGTTTCTAAAGCTTCCAGTTGTTaGAAATCTTCATCTTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: YIYVNGTDFCFEQTGPVSKASSC*KSSSCL Trigger: GAGACAAGATGAAGATTTCAAACAACTGGAAGCTTT...AGAAACAGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR-3UTR CAA 90 bp | ATACGAATTACATGCAATTTCCCCCTTAAGATTATAACGTCGCTAATTCTCTCCACACACATGTTTTATTaGTTAAGCTGCCAGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: IRITCNFPLKIITSLILSTHMFY*LSCQLC Trigger: ACAAAGCTGGCAGCTTAACAAATAAAACATGTGTGT...GGAGAGAATTAGCGACGTTATAATCTTAAGGGGGAAATTGCATGTAATTCGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| 3UTR GCA 72 bp | TGGATATATCCTGTGTGGTATATATCCAGAGTATGTTaGCATTTATTTCTAGAAGTTTACCAGAAAGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: WIYPVWYISRVC*HLFLEVYQKVV Trigger: GACCACTTTCTGGTAAACTTCTAGAAATAAATGGCAACATACTCTGGATATATACCACACAGGATATATCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| CDS-3UTR GCA 90 bp | TTAGGCTCCCGTCCCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTTCCAGTTCCAGCCGCTGTGCCTaGTGCTTGCTCCCATGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LGSRPPPPVLTRATKASSSSRCA*CLLPCV Trigger: GACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGA...ACTGGAAGCTTTGGTCGCTCTCGTGAGGACTGGTGGAGGGGGACGGGAGCCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| 3UTR CAA 72 bp | CTTTCAGCACCCTGCTCCAGCCGCTGTGCCTGCTGCTaGCTCCCATGTGTCTGTGCCATGATGGATAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: LSAPCSSRCACC*LPCVCAMMDSY Trigger: GTAACTATCCATCATGGCACAGACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGAGCAGGGTGCTGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| CDS-3UTR GCA 90 bp | TGTTTCTTAGGCTCCCGTCCCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTTCACTCGAAGTAAACTaGATAGACATTTGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: CFLGSRPPPPVLTRATKASLEVN*IDICKC Trigger: GCACTTGCAAATGTCTATGCAGTTTACTTCGAGTGA...AGCTTTGGTCGCTCTCGTGAGGACTGGTGGAGGGGGACGGGAGCCTAAGAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| CDS-3UTR CCA 90 bp | AGTCCTCACGAGAGCGACCAAAGCTTCCAGTTGTTTGAAATCTTCATCTTGTCTGAGGATTCATCACGCTaGCTGGGCTCATCCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SPHESDQSFQLFEIFILSEDSSR*LGSSAW Trigger: CCACGCGGATGAGCCCAGCCAGCGTGATGAATCCTC...AGACAAGATGAAGATTTCAAACAACTGGAAGCTTTGGTCGCTCTCGTGAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS-3UTR CCA 90 bp | AGCATCTACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGAGGATTCATCACGCTaGCTGGGCTCATCCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SIYIYVNGTDFCFEQTGPEDSSR*LGSSAW Trigger: CCACGCGGATGAGCCCAGCCAGCGTGATGAATCCTC...AGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS-3UTR CCA 90 bp | AGTCCTCACGAGAGCGACCAAAGCTTCCAGTTGTTTGAAATCTTCATCTTGTCTCCACGGGGAAAGGTTTaGTGGGACCTAACTGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SPHESDQSFQLFEIFILSPRGKV*WDLTGR Trigger: CCTACCAGTTAGGTCCCACCAAACCTTTCCCCGTGG...AGACAAGATGAAGATTTCAAACAACTGGAAGCTTTGGTCGCTCTCGTGAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| CDS-3UTR GCA 90 bp | ATCTACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGTTTCCAGCCGCTGTGCCTaGTGCTTGCTCCCATGTGTC | + |
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Preference number: 4 (lower is better) Translates to: IYIYVNGTDFCFEQTGPVSSRCA*CLLPCV Trigger: GACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGA...AACAGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS-3UTR CCA 90 bp | CATTTATTTCTAGAAGTTTACCAGAAAGTGGTCCAGGAAATTCTAGCTCTCCAAGAGGATTCATCACGCTaGCTGGGCTCATCCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: HLFLEVYQKVVQEILALQEDSSR*LGSSAW Trigger: CCACGCGGATGAGCCCAGCCAGCGTGATGAATCCTC...TTGGAGAGCTAGAATTTCCTGGACCACTTTCTGGTAAACTTCTAGAAATAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| CDS-3UTR GCA 90 bp | TGTCATGTTGAATTATCCTATGTGGATATATCCTGTGTGGTATATATCCAGAGTTCCAGCCGCTGTGCCTaGTGCTTGCTCCCATGTGTC | + |
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Preference number: 4 (lower is better) Translates to: CHVELSYVDISCVVYIQSSSRCA*CLLPCV Trigger: GACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGA...ACTCTGGATATATACCACACAGGATATATCCACATAGGATAATTCAACATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| CDS-3UTR CCA 90 bp | TGTCATGTTGAATTATCCTATGTGGATATATCCTGTGTGGTATATATCCAGAGTCCACGGGGAAAGGTTTaGTGGGACCTAACTGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CHVELSYVDISCVVYIQSPRGKV*WDLTGR Trigger: CCTACCAGTTAGGTCCCACCAAACCTTTCCCCGTGG...ACTCTGGATATATACCACACAGGATATATCCACATAGGATAATTCAACATGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| CDS-3UTR GCA 90 bp | ATCTACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGTTAAACGTTGTTCTCTCTaGTCTGTGCCTGTGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: IYIYVNGTDFCFEQTGPVKRCSL*SVPVLH Trigger: ATGGAGCACAGGCACAGAGCAGAGAGAACAACGTTT...AACAGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS-3UTR GCA 90 bp | AGTCCTCACGAGAGCGACCAAAGCTTCCAGTTGTTTGAAATCTTCATCTTGTCTTCACTCGAAGTAAACTaGATAGACATTTGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SPHESDQSFQLFEIFILSSLEVN*IDICKC Trigger: GCACTTGCAAATGTCTATGCAGTTTACTTCGAGTGA...AGACAAGATGAAGATTTCAAACAACTGGAAGCTTTGGTCGCTCTCGTGAGGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| CDS-3UTR GCA 90 bp | TCCTATGTGGATATATCCTGTGTGGTATATATCCAGAGTATGTTGCCATTTATTAAACGTTGTTCTCTCTaGTCTGTGCCTGTGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SYVDISCVVYIQSMLPFIKRCSL*SVPVLH Trigger: ATGGAGCACAGGCACAGAGCAGAGAGAACAACGTTT...AATAAATGGCAACATACTCTGGATATATACCACACAGGATATATCCACATAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| CDS-3UTR GCA 90 bp | AGCATCTACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTTCACTCGAAGTAAACTaGATAGACATTTGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SIYIYVNGTDFCFEQTGPSLEVN*IDICKC Trigger: GCACTTGCAAATGTCTATGCAGTTTACTTCGAGTGA...AGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGATGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| CDS-3UTR GCA 90 bp | ATCTACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGTTTCACTCGAAGTAAACTaGATAGACATTTGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: IYIYVNGTDFCFEQTGPVSLEVN*IDICKC Trigger: GCACTTGCAAATGTCTATGCAGTTTACTTCGAGTGA...AACAGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 |
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| 3UTR CAA 72 bp | GTGGATATATCCTGTGTGGTATATATCCAGAGTATGTaGCCATTTATTTCTAGAAGTTTACCAGAAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VDISCVVYIQSM*PFISRSLPESG Trigger: ACCACTTTCTGGTAAACTTCTAGAAATAAATGGCAACATACTCTGGATATATACCACACAGGATATATCCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| CDS CCA 90 bp | ACTGTGAGGCGAGAGGATTCATCACGCTGGCTGGGCTCATCCGCGTaGGACACGGTACTGAGGGAAACGTTGTTCTCTCTGCTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: TVRREDSSRWLGSSA*DTVLRETLFSLLCA Trigger: GGCACAGAGCAGAGAGAACAACGTTTCCCTCAGTACCGTGTCCCACGCGGATGAGCCCAGCCAGCGTGATGAATCCTCTCGCCTCACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS TCA 90 bp | AGGATTCATCACGCTGGCTGGGCTCATCCGCGTGGGACACGGTACTaGGGGAAACGTTGTTCTCTCTGCTCTGTGCCTGTGCTCCATGAC | + |
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Preference number: 5 (lower is better) Translates to: RIHHAGWAHPRGTRY*GKRCSLCSVPVLHD Trigger: GTCATGGAGCACAGGCACAGAGCAGAGAGAACAACGTTTCCCTCAGTACCGTGTCCCACGCGGATGAGCCCAGCCAGCGTGATGAATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS TCA 90 bp | AAGGTTTGGTGGGACCTAACTGGTAGGTGTTTTCCATCCGGACTGTaGGGCGAGAGGATTCATCACGCTGGCTGGGCTCATCCGCGTGGG | + |
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Preference number: 5 (lower is better) Translates to: KVWWDLTGRCFPSGL*GERIHHAGWAHPRG Trigger: CCCACGCGGATGAGCCCAGCCAGCGTGATGAATCCTCTCGCCTCACAGTCCGGATGGAAAACACCTACCAGTTAGGTCCCACCAAACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 ENSMUST00000223169.2 |
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| CDS-3UTR CAA 90 bp | TTAGGCTCCCGTCCCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTTCCAGTGTACTGAGGGAAACGTaGTTCTCTCTGCTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LGSRPPPPVLTRATKASSVLRET*FSLLCA Trigger: GGCACAGAGCAGAGAGAACAACGTTTCCCTCAGTAC...ACTGGAAGCTTTGGTCGCTCTCGTGAGGACTGGTGGAGGGGGACGGGAGCCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS TCA 90 bp | TCATCCGCGTGGGACACGGTACTGAGGGAATGTTTGATGCGCCAGTaGCCTTCCTTCTGTCGGAACTCACGATTATTTGGGGAACACATG | + |
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Preference number: 5 (lower is better) Translates to: SSAWDTVLRECLMRQ*PSFCRNSRLFGEHM Trigger: CATGTGTTCCCCAAATAATCGTGAGTTCCGACAGAAGGAAGGTCACTGGCGCATCAAACATTCCCTCAGTACCGTGTCCCACGCGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223169.2 |
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| CDS-3UTR CAA 90 bp | AGCTTTCAGCACCCTGCTCCAGCCGCTGTGCCTGCTGCTTGCTCCCATGTGTCTTCCCCCTTTTCTTCATaGCAAGAAACAGTTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SFQHPAPAAVPAACSHVSSPFSS*QETVSL Trigger: AAGAGAAACTGTTTCTTGCAATGAAGAAAAGGGGGA...AGACACATGGGAGCAAGCAGCAGGCACAGCGGCTGGAGCAGGGTGCTGAAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220547.2 |
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| CDS CCA 90 bp | TTTGATGCGCCAGTGACCTTCCTTCTGTCGGAACTCACGATTATTTaGGGAACACATGCTCCCCCTTTTCTTCATTGCAAGAAACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: FDAPVTFLLSELTII*GTHAPPFLHCKKQF Trigger: AAACTGTTTCTTGCAATGAAGAAAAGGGGGAGCATGTGTTCCCCAAATAATCGTGAGTTCCGACAGAAGGAAGGTCACTGGCGCATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220547.2 ENSMUST00000223169.2 |
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| CDS-3UTR CAA 90 bp | TACATTTATGTGAATGGCACTGACTTCTGCTTTGAACAAACAGGACCTGTTTCTGTACTGAGGGAAACGTaGTTCTCTCTGCTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: YIYVNGTDFCFEQTGPVSVLRET*FSLLCA Trigger: GGCACAGAGCAGAGAGAACAACGTTTCCCTCAGTAC...AGAAACAGGTCCTGTTTGTTCAAAGCAGAAGTCAGTGCCATTCACATAAATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS-3UTR CAA 90 bp | CTGATACGAATTACATGCAATTTCCCCCTTAAGATTATAACGTCGCTAATTCTCGTACTGAGGGAAACGTaGTTCTCTCTGCTCTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LIRITCNFPLKIITSLILVLRET*FSLLCA Trigger: GGCACAGAGCAGAGAGAACAACGTTTCCCTCAGTAC...GAGAATTAGCGACGTTATAATCTTAAGGGGGAAATTGCATGTAATTCGTATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116317.9 |
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| CDS CCA 72 bp | CGAGAGGATTCATCACGCTGGCTGGGCTCATCCGCGTaGGACACGGTACTGAGGGAATGTTTGATGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: REDSSRWLGSSA*DTVLRECLMRQ Trigger: CTGGCGCATCAAACATTCCCTCAGTACCGTGTCCCACGCGGATGAGCCCAGCCAGCGTGATGAATCCTCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223169.2 |
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| CDS CCA 72 bp | CGAGAGGATTCATCACGCTGGCTGGGCTCATCCGCGTaGGACACGGTACTGAGGGAAACGTTGTTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: REDSSRWLGSSA*DTVLRETLFSL Trigger: CAGAGAGAACAACGTTTCCCTCAGTACCGTGTCCCACGCGGATGAGCCCAGCCAGCGTGATGAATCCTCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 |
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| CDS TCA 72 bp | TGGGACCTAACTGGTAGGTGTTTTCCATCCGGACTGTaGGGCGAGAGGATTCATCACGCTGGCTGGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: WDLTGRCFPSGL*GERIHHAGWAH Trigger: ATGAGCCCAGCCAGCGTGATGAATCCTCTCGCCTCACAGTCCGGATGGAAAACACCTACCAGTTAGGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000169211.3 ENSMUST00000223169.2 |
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| CDS TCA 72 bp | TGGGACACGGTACTGAGGGAATGTTTGATGCGCCAGTaGCCTTCCTTCTGTCGGAACTCACGATTATTTGGG | + |
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Preference number: 6 (lower is better) Translates to: WDTVLRECLMRQ*PSFCRNSRLFG Trigger: CCCAAATAATCGTGAGTTCCGACAGAAGGAAGGTCACTGGCGCATCAAACATTCCCTCAGTACCGTGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223169.2 |
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| CDS TCA 72 bp | CTATGCTCTGGTCATCCCGCTGTCCGATGTAAACGATaGCAATTAGTTTATATCTCGGAATCACTAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: LCSGHPAVRCKR*QLVYISESLIP Trigger: AGGAATTAGTGATTCCGAGATATAAACTAATTGTCATCGTTTACATCGGACAGCGGGATGACCAGAGCATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030248.12 ENSMUST00000116317.9 ENSMUST00000125417.9 ENSMUST00000140654.9 ENSMUST00000169211.3 ENSMUST00000223169.2 |
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