Pregenerated sensors for DYNLT2A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000116780Ensembl transcript IDs: ENSMUST00000097399.6, ENSMUST00000231584.2, ENSMUST00000232173.2
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | GAGCTATTCACAATAGAGAGCAAACACCAAGGCCAATACCACGTAAGACTCTGTCCCAGATCCATCTGCTaGCAATTTAGCATCTGGAAG | + |
Preference number: 4 (lower is better) Translates to: ELFTIESKHQGQYHVRLCPRSIC*QFSIWK Trigger: CTTCCAGATGCTAAATTGCCAGCAGATGGATCTGGG...ACAGAGTCTTACGTGGTATTGGCCTTGGTGTTTGCTCTCTATTGTGAATAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS-3UTR GCA 90 bp | TTCACAATAGAGAGCAAACACCAAGGCCAATACCACGTAAGACTCTGTTTCATGCATCCCAGATCCATCTaGTGGCAATTTAGCATCTGG | + |
Preference number: 4 (lower is better) Translates to: FTIESKHQGQYHVRLCFMHPRSI*WQFSIW Trigger: CCAGATGCTAAATTGCCAGCAGATGGATCTGGGATG...CATGAAACAGAGTCTTACGTGGTATTGGCCTTGGTGTTTGCTCTCTATTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS-3UTR CCA 90 bp | TTCACAATAGAGAGCAAACACCAAGGCCAATACCACGTAAGACTCTGTTTCATGTGGCAATTTAGCATCTaGAAGAATGTCCACCTTGAT | + |
Preference number: 4 (lower is better) Translates to: FTIESKHQGQYHVRLCFMWQFSI*KNVHLD Trigger: ATCAAGGTGGACATTCTTCCAGATGCTAAATTGCCA...CATGAAACAGAGTCTTACGTGGTATTGGCCTTGGTGTTTGCTCTCTATTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS CCA 90 bp | TGTCCCATGCCACATCCCAGATCCATCTGCTGGCAATTTAGCATCTaGAAGAATGTCCACCTTGATTCCTTGACCTTTAATATCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: CPMPHPRSICWQFSI*KNVHLDSLTFNICW Trigger: CCAGCAGATATTAAAGGTCAAGGAATCAAGGTGGACATTCTTCCAGATGCTAAATTGCCAGCAGATGGATCTGGGATGTGGCATGGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS-3UTR CAA 90 bp | GCTATTCACAATAGAGAGCAAACACCAAGGCCAATACCACGTAAGACTCTGTTTTTAGCTTCTACCCAGTaGTCCCATGCCACATCCCAG | + |
Preference number: 5 (lower is better) Translates to: AIHNREQTPRPIPRKTLFLASTQ*SHATSQ Trigger: CTGGGATGTGGCATGGGACAACTGGGTAGAAGCTAA...AAACAGAGTCTTACGTGGTATTGGCCTTGGTGTTTGCTCTCTATTGTGAATAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS-3UTR CAA 90 bp | ATTCACAATAGAGAGCAAACACCAAGGCCAATACCACGTAAGACTCTGTTTCATTGCCTACATCAGCAATaGAGTCATCAAACGGAGGTT | + |
Preference number: 5 (lower is better) Translates to: IHNREQTPRPIPRKTLFHCLHQQ*SHQTEV Trigger: AACCTCCGTTTGATGACTCAATTGCTGATGTAGGCA...ATGAAACAGAGTCTTACGTGGTATTGGCCTTGGTGTTTGCTCTCTATTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS-3UTR CAA 90 bp | TTCACAATAGAGAGCAAACACCAAGGCCAATACCACGTAAGACTCTGTTTCATGTTCTACCAAATGTGCTaGAAATTTCTTCAGTGGCTC | + |
Preference number: 5 (lower is better) Translates to: FTIESKHQGQYHVRLCFMFYQMC*KFLQWL Trigger: GAGCCACTGAAGAAATTTCAAGCACATTTGGTAGAA...CATGAAACAGAGTCTTACGTGGTATTGGCCTTGGTGTTTGCTCTCTATTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS TCA 90 bp | TCTTTGACTGCTGCCAATATTCCATCTGCCAATTCAAGTGACAAATaGGGGGCTTTGTCATCATATTTGACATCTTTAAGACTGTCCTTT | + |
Preference number: 5 (lower is better) Translates to: SLTAANIPSANSSDK*GALSSYLTSLRLSF Trigger: AAAGGACAGTCTTAAAGATGTCAAATATGATGACAAAGCCCCTCATTTGTCACTTGAATTGGCAGATGGAATATTGGCAGCAGTCAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097399.6 |
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CDS TCA 90 bp | TGCAAATTCTTTGACTGCTGCCAATATTCCATCTGCCAATTCAAGTaGCAAATGAGGGGCTTTGTCATCATATTTGACATCTTTAAGACT | + |
Preference number: 5 (lower is better) Translates to: CKFFDCCQYSICQFK*QMRGFVIIFDIFKT Trigger: AGTCTTAAAGATGTCAAATATGATGACAAAGCCCCTCATTTGTCACTTGAATTGGCAGATGGAATATTGGCAGCAGTCAAAGAATTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097399.6 |
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CDS TCA 72 bp | CAGGGCACTTTTCCATTCTTTGCCTACATCAGCAATTaGGTCATCAAACGGAGGTTCCACGTACTGAACATC | + |
Preference number: 6 (lower is better) Translates to: QGTFPFFAYISN*VIKRRFHVLNI Trigger: GATGTTCAGTACGTGGAACCTCCGTTTGATGACTCAATTGCTGATGTAGGCAAAGAATGGAAAAGTGCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097399.6 ENSMUST00000231584.2 ENSMUST00000232173.2 |
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CDS CAA 72 bp | CCAGGGCACTTTTCCATTCTTTGCCTACATCAGCAATaGAGTCATCAAACGGAGGTTCCACGTACTGAACAT | + |
Preference number: 6 (lower is better) Translates to: PGHFSILCLHQQ*SHQTEVPRTEH Trigger: ATGTTCAGTACGTGGAACCTCCGTTTGATGACTCAATTGCTGATGTAGGCAAAGAATGGAAAAGTGCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097399.6 ENSMUST00000231584.2 ENSMUST00000232173.2 |
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CDS CCA 72 bp | CCACATCCCAGATCCATCTGCTGGCAATTTAGCATCTaGAAGAATGTCCACCTTGATTCCTTGACCTTTAAT | + |
Preference number: 6 (lower is better) Translates to: PHPRSICWQFSI*KNVHLDSLTFN Trigger: ATTAAAGGTCAAGGAATCAAGGTGGACATTCTTCCAGATGCTAAATTGCCAGCAGATGGATCTGGGATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232173.2 |
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CDS TCA 72 bp | TTTGACTGCTGCCAATATTCCATCTGCCAATTCAAGTaGCAAATGAGGGGCTTTGTCATCATATTTGACATC | + |
Preference number: 6 (lower is better) Translates to: FDCCQYSICQFK*QMRGFVIIFDI Trigger: GATGTCAAATATGATGACAAAGCCCCTCATTTGTCACTTGAATTGGCAGATGGAATATTGGCAGCAGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097399.6 |