RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYNLT2A2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079710

Ensembl transcript IDs: ENSMUST00000097400.5, ENSMUST00000179539.9, ENSMUST00000232299.2

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATACTGGAAAGACGGAGTTCTCGCAGACAGGAGAACACTCCAGTTTaGATCTGCCATTATAACAAACCGTGTATTAAGTTCATTAACTTA +
Preference number: 1 (lower is better)
Translates to: ILERRSSRRQENTPV*ICHYNKPCIKFINL
Trigger: TAAGTTAATGAACTTAATACACGGTTTGTTATAATGGCAGATGCAAACTGGAGTGTTCTCCTGTCTGCGAGAACTCCGTCTTTCCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp GACCTAACTCCGGCTAAGCAAAAGCATATTATACTGGAAAGACGGAGTTCTCGCCTCCCAGCACCCACATaGTGGCTCACAACCACACTC +
Preference number: 2 (lower is better)
Translates to: DLTPAKQKHIILERRSSRLPAPT*WLTTTL
Trigger: GAGTGTGGTTGTGAGCCAGCATGTGGGTGCTGGGAG...GCGAGAACTCCGTCTTTCCAGTATAATATGCTTTTGCTTAGCCGGAGTTAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR TCA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAGGACATTTGCAAGTCTaGAAAGAATTGAGGATGCCT +
Preference number: 2 (lower is better)
Translates to: ATSPKTFPPERREGHRESGHLQV*KELRMP
Trigger: AGGCATCCTCAATTCTTTTCAGACTTGCAAATGTCC...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp TCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAGCAGCTTCAAATAAGATGCCTTaGTCCATGTACCCTTGTTTC +
Preference number: 2 (lower is better)
Translates to: SPKTFPPERREGHRESAASNKMP*SMYPCF
Trigger: GAAACAAGGGTACATGGAGCAAGGCATCTTATTTGA...AGCTGCTGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCACTCATGTCACTTACATaGTGCATAGACACATACCCA +
Preference number: 2 (lower is better)
Translates to: ATSPKTFPPERREGHRESLMSLT*CIDTYP
Trigger: TGGGTATGTGTCTATGCAGCATGTAAGTGACATGAG...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR CCA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAGTCTTGCCATCACTCTaGGGTCATCTCAAAATAGTT +
Preference number: 2 (lower is better)
Translates to: ATSPKTFPPERREGHRESVLPSL*GHLKIV
Trigger: AACTATTTTGAGATGACCCCAGAGTGATGGCAAGAC...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR TCA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCACAAGTGGTGCTCATTTaGTTCAGGTGTCTTGATTTT +
Preference number: 2 (lower is better)
Translates to: ATSPKTFPPERREGHRESQVVLI*FRCLDF
Trigger: AAAATCAAGACACCTGAATCAAATGAGCACCACTTG...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAATGTCACTTACATGCTaGATAGACACATACCCAAAC +
Preference number: 2 (lower is better)
Translates to: ATSPKTFPPERREGHRESMSLTC*IDTYPN
Trigger: GTTTGGGTATGTGTCTATGCAGCATGTAAGTGACAT...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp TCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAGCAGCTTGTGTGAACTCAGCATaGTTACTTTTCTATTTGTTC +
Preference number: 2 (lower is better)
Translates to: SPKTFPPERREGHRESAACVNSA*LLFYLF
Trigger: GAACAAATAGAAAAGTAAGCATGCTGAGTTCACACA...AGCTGCTGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR CCA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAGTAGGTAAAATCAAGTaGTGCTCATTTGATTCAGGT +
Preference number: 2 (lower is better)
Translates to: ATSPKTFPPERREGHRESVGKIK*CSFDSG
Trigger: ACCTGAATCAAATGAGCACCACTTGATTTTACCTAC...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAAGCTCAACACTATTTTaGAACCTTGTGCAAAATGTT +
Preference number: 2 (lower is better)
Translates to: ATSPKTFPPERREGHRESSSTLF*NLVQNV
Trigger: AACATTTTGCACAAGGTTGCAAAATAGTGTTGAGCT...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp GACCTAACTCCGGCTAAGCAAAAGCATATTATACTGGAAAGACGGAGTTCTCGCACAATCATACAGAAATaGCAGTGTTCTACTGAAATG +
Preference number: 2 (lower is better)
Translates to: DLTPAKQKHIILERRSSRTIIQK*QCSTEM
Trigger: CATTTCAGTAGAACACTGGCATTTCTGTATGATTGT...GCGAGAACTCCGTCTTTCCAGTATAATATGCTTTTGCTTAGCCGGAGTTAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR GCA 90 bp ATTGTTCTTTTTCCTAGGTGTGTGAACTCAGCATGCTTACTTTTCTATTTGTTCTCAAACCTGAAGTCTTaGCATCACTCTGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: IVLFPRCVNSACLLFYLFSNLKS*HHSGVI
Trigger: GATGACCCCAGAGTGATGGCAAGACTTCAGGTTTGA...GAACAAATAGAAAAGTAAGCATGCTGAGTTCACACACCTAGGAAAAAGAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR TCA 90 bp ATTGTTCTTTTTCCTAGGTGTGTGAACTCAGCATGCTTACTTTTCTATTTGTTCCTAAAAGCACTTCACTaGTCAGCACATCAGTTTTTC +
Preference number: 2 (lower is better)
Translates to: IVLFPRCVNSACLLFYLFLKALH*SAHQFF
Trigger: GAAAAACTGATGTGCTGATCAGTGAAGTGCTTTTAG...GAACAAATAGAAAAGTAAGCATGCTGAGTTCACACACCTAGGAAAAAGAACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR TCA 72 bp TTATCCCTACAAAGTCTGAGTAGTCACTTAACCCACTaGAGCCCTGCCCAATGTGAGGTGAGCTACATCTCC +
Preference number: 3 (lower is better)
Translates to: LSLQSLSSHLTH*SPAQCEVSYIS
Trigger: GGAGATGTAGCTCACCTCACATTGGGCAGGGCTTCAGTGGGTTAAGTGACTACTCAGACTTTGTAGGGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR GCA 72 bp AGACGGAGTTCTCGCAGACAGGAGAACACTCCAGTTTaGATCTGCCATTATAACAAACCGTGTATTAAGTTC +
Preference number: 3 (lower is better)
Translates to: RRSSRRQENTPV*ICHYNKPCIKF
Trigger: GAACTTAATACACGGTTTGTTATAATGGCAGATGCAAACTGGAGTGTTCTCCTGTCTGCGAGAACTCCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR-3UTR CAA 90 bp GACCTAACTCCGGCTAAGCAAAAGCATATTATACTGGAAAGACGGAGTTCTCGCTTCCTAGATTCACTCTaGTCTGTCTCAAAGTATAGA +
Preference number: 3 (lower is better)
Translates to: DLTPAKQKHIILERRSSRFLDSL*SVSKYR
Trigger: TCTATACTTTGAGACAGACAAGAGTGAATCTAGGAA...GCGAGAACTCCGTCTTTCCAGTATAATATGCTTTTGCTTAGCCGGAGTTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR GCA 72 bp AGTTCTCGCAGACAGGAGAACACTCCAGTTTGCATCTaGCATTATAACAAACCGTGTATTAAGTTCATTAAC +
Preference number: 3 (lower is better)
Translates to: SSRRQENTPVCI*HYNKPCIKFIN
Trigger: GTTAATGAACTTAATACACGGTTTGTTATAATGGCAGATGCAAACTGGAGTGTTCTCCTGTCTGCGAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR CCA 72 bp CTGGATATAAATGGATACAGGGTAGGTAAAATCAAGTaGTGCTCATTTGATTCAGGTGTCTTGATTTTTCAT +
Preference number: 3 (lower is better)
Translates to: LDINGYRVGKIK*CSFDSGVLIFH
Trigger: ATGAAAAATCAAGACACCTGAATCAAATGAGCACCACTTGATTTTACCTACCCTGTATCCATTTATATCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
CDS-3UTR CCA 90 bp TCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAGCAGCTGTGGGAAGGCTGTCTTaGGCCTCCGGTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SPKTFPPERREGHRESAAVGRLS*ASGLHS
Trigger: TGAGTGGAGACCGGAGGCCCAAGACAGCCTTCCCAC...AGCTGCTGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
CDS-3UTR TCA 90 bp GACCTAACTCCGGCTAAGCAAAAGCATATTATACTGGAAAGACGGAGTTCTCGCCCGGTCTCCACTCACTaGCTCCTTCTCGAACATGCT +
Preference number: 4 (lower is better)
Translates to: DLTPAKQKHIILERRSSRPVSTH*LLLEHA
Trigger: AGCATGTTCGAGAAGGAGTCAGTGAGTGGAGACCGG...GCGAGAACTCCGTCTTTCCAGTATAATATGCTTTTGCTTAGCCGGAGTTAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
3UTR CAA 72 bp GTGTCCTCAGACACAGGTCCTAAGCTCAACACTATTTaGCAACCTTGTGCAAAATGTTTTCCCTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VSSDTGPKLNTI*QPCAKCFPSLP
Trigger: AGGCAATGAGGGAAAACATTTTGCACAAGGTTGCAAAATAGTGTTGAGCTTAGGACCTGTGTCTGAGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
CDS-3UTR CAA 90 bp GCTACATCTCCGAAAACATTCCCACCAGAGAGAAGAGAGGGCCACCGGGAGTCAGGTGGGAAGGCTGTCTaGGGCCTCCGGTCTCCACTC +
Preference number: 5 (lower is better)
Translates to: ATSPKTFPPERREGHRESGGKAV*GLRSPL
Trigger: GAGTGGAGACCGGAGGCCCAAGACAGCCTTCCCACC...TGACTCCCGGTGGCCCTCTCTTCTCTCTGGTGGGAATGTTTTCGGAGATGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
CDS TCA 90 bp TCTAAAGGGTGGGAAGGCTGTCTTGGGCCTCCGGTCTCCACTCACTaGCTCCTTCTCGAACATGCTAGGCTTCCTTTCTCTCTTAGACAC +
Preference number: 5 (lower is better)
Translates to: SKGWEGCLGPPVSTH*LLLEHARLPFSLRH
Trigger: GTGTCTAAGAGAGAAAGGAAGCCTAGCATGTTCGAGAAGGAGTCAGTGAGTGGAGACCGGAGGCCCAAGACAGCCTTCCCACCCTTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
CDS GCA 90 bp CACGTAAGACTCTGTTTCATGTTTAGCTTCTACCCAGTTGTCCCATaGCACATCCCAGATCCATCTGCTGGCAATATTTATTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: HVRLCFMFSFYPVVP*HIPDPSAGNIYCLT
Trigger: GGTCAAGCAATAAATATTGCCAGCAGATGGATCTGGGATGTGGCATGGGACAACTGGGTAGAAGCTAAACATGAAACAGAGTCTTACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097400.5
ENSMUST00000179539.9
CDS TCA 72 bp TGGGAAGGCTGTCTTGGGCCTCCGGTCTCCACTCACTaGCTCCTTCTCGAACATGCTAGGCTTCCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: WEGCLGPPVSTH*LLLEHARLPFS
Trigger: AGAGAAAGGAAGCCTAGCATGTTCGAGAAGGAGTCAGTGAGTGGAGACCGGAGGCCCAAGACAGCCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232299.2
CDS GCA 72 bp CTCTGTTTCATGTTTAGCTTCTACCCAGTTGTCCCATaGCACATCCCAGATCCATCTGCTGGCAATATTTAT +
Preference number: 6 (lower is better)
Translates to: LCFMFSFYPVVP*HIPDPSAGNIY
Trigger: ATAAATATTGCCAGCAGATGGATCTGGGATGTGGCATGGGACAACTGGGTAGAAGCTAAACATGAAACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097400.5
ENSMUST00000179539.9
CDS GCA 72 bp CAAACTTTAATTTTGCCAGGGCACTTTTCCATTCTTTaGCTACATCAGCAATTGAGTCATCAAACGGAGGTT +
Preference number: 6 (lower is better)
Translates to: QTLILPGHFSIL*LHQQLSHQTEV
Trigger: AACCTCCGTTTGATGACTCAATTGCTGATGTAGGCAAAGAATGGAAAAGTGCCCTGGCAAAATTAAAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097400.5
ENSMUST00000179539.9