Pregenerated sensors for DYNLT2A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079707

Ensembl transcript IDs: ENSMUST00000040746.8, ENSMUST00000097398.12

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTCTCGAACATGCTAGGCTTCCTTTCTCTCTTAGACACCGGGGATTaGTGCGTTTGGCCGGTGGGCGTCTTCGCCATTCGGCCTCGCCGC	+
Preference number: 5 (lower is better) Translates to: FSNMLGFLSLLDTGD*CVWPVGVFAIRPRR Trigger: GCGGCGAGGCCGAATGGCGAAGACGCCCACCGGCCAAACGCATCAATCCCCGGTGTCTAAGAGAGAAAGGAAGCCTAGCATGTTCGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040746.8 ENSMUST00000097398.12
CDS TCA 90 bp	TCTTTGACTGCTGCCAATATTCGATCTGCCAATTCAAGTGACAAATaGGGGGCTTTGTCATCATATTTGACATCTTTAAGACTGTCCTTT	+
Preference number: 5 (lower is better) Translates to: SLTAANIRSANSSDK*GALSSYLTSLRLSF Trigger: AAAGGACAGTCTTAAAGATGTCAAATATGATGACAAAGCCCCTCATTTGTCACTTGAATTGGCAGATCGAATATTGGCAGCAGTCAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040746.8
CDS TCA 90 bp	TGCAAATTCTTTGACTGCTGCCAATATTCGATCTGCCAATTCAAGTaGCAAATGAGGGGCTTTGTCATCATATTTGACATCTTTAAGACT	+
Preference number: 5 (lower is better) Translates to: CKFFDCCQYSICQFK*QMRGFVIIFDIFKT Trigger: AGTCTTAAAGATGTCAAATATGATGACAAAGCCCCTCATTTGTCACTTGAATTGGCAGATCGAATATTGGCAGCAGTCAAAGAATTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040746.8
CDS CAA 90 bp	CTTCTCGAACATGCTAGGCTTCCTTTCTCTCTTAGACACCGGGGATaGATGCGTTTGGCCGGTGGGCGTCTTCGCCATTCGGCCTCGCCG	+
Preference number: 6 (lower is better) Translates to: LLEHARLPFSLRHRG*MRLAGGRLRHSASP Trigger: CGGCGAGGCCGAATGGCGAAGACGCCCACCGGCCAAACGCATCAATCCCCGGTGTCTAAGAGAGAAAGGAAGCCTAGCATGTTCGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040746.8 ENSMUST00000097398.12
CDS CAA 90 bp	TATGAATTAGCAAACTTTAATTTTGCCAGGGCACTTTTCCATTCTTaGCCTACATCAGCAATTGAGTCATCAAACGGAGGTTCCACGTAC	+
Preference number: 6 (lower is better) Translates to: YELANFNFARALFHS*PTSAIESSNGGSTY Trigger: GTACGTGGAACCTCCGTTTGATGACTCAATTGCTGATGTAGGCAAAGAATGGAAAAGTGCCCTGGCAAAATTAAAGTTTGCTAATTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040746.8 ENSMUST00000097398.12
CDS TCA 72 bp	TTTGACTGCTGCCAATATTCGATCTGCCAATTCAAGTaGCAAATGAGGGGCTTTGTCATCATATTTGACATC	+
Preference number: 6 (lower is better) Translates to: FDCCQYSICQFK*QMRGFVIIFDI Trigger: GATGTCAAATATGATGACAAAGCCCCTCATTTGTCACTTGAATTGGCAGATCGAATATTGGCAGCAGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040746.8

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