Pregenerated sensors for DYNLT1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000579Ensembl transcript IDs: ENSMUST00000092966.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGAAACAGGCCCGCGGCTTCAAGCATGACCTGCAAAGCTGGCTGTaGACTGTCCTGAGACCAGCAGCTCAGGTATACTCGATGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: KKQARGFKHDLQSWL*TVLRPAAQVYSMSA Trigger: TGCTGACATCGAGTATACCTGAGCTGCTGGTCTCAGGACAGTGCACAGCCAGCTTTGCAGGTCATGCTTGAAGCCGCGGGCCTGTTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CCA 90 bp | CAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTGGTGGTTAAGATaGACTGGAAATGCTGGGACCACGAGGCTGAGGCTGGCAAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QLRRKGFAQHSWWLR*TGNAGTTRLRLARW Trigger: CCACCTTGCCAGCCTCAGCCTCGTGGTCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CCA 90 bp | GCCACAGAACAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTGGTaGTTAAGATGGACTGGAAATGCTGGGACCACGAGGCTGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ATEQLRRKGFAQHSW*LRWTGNAGTTRLRL Trigger: CAGCCTCAGCCTCGTGGTCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTGTTCTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CCA 90 bp | AGTGCCACAGAACAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTaGTGGTTAAGATGGACTGGAAATGCTGGGACCACGAGGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SATEQLRRKGFAQHS*WLRWTGNAGTTRLR Trigger: CCTCAGCCTCGTGGTCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTGTTCTGTGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CCA 90 bp | GGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTaGCCAGCAAATTTAGCTCAAACAGTGTGCTCCAGGTTCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: GLGKRSRDRCVPLFW*PANLAQTVCSRFSE Trigger: CTCACTGAACCTGGAGCACACTGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CCA 90 bp | CCAGGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTaGTGGCCAGCAAATTTAGCTCAAACAGTGTGCTCCAGGTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PGLGKRSRDRCVPLF*WPANLAQTVCSRFS Trigger: ACTGAACCTGGAGCACACTGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CCA 90 bp | CTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGCAGGAGCATaGCAGCATCCAAGCAGGCATGGTGCAAGCAGAGCTGAGAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTGSEVQSIIIKAGA*QHPSRHGASRAESS Trigger: AGAACTCTCAGCTCTGCTTGCACCATGCCTGCTTGGATGCTGCCATGCTCCTGCCTTGATGATAATGGACTGAACCTCTGAACCTGTAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR TCA 90 bp | TTGGTGGCCAGCAAATTTAGCTCAAACAGTGTGCTCCAGGTTCAGTaGGAGACCCCATCTCAGGAAATATGCTGGAACTGGGCACACACA | + |
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Preference number: 1 (lower is better) Translates to: LVASKFSSNSVLQVQ*ETPSQEICWNWAHT Trigger: TGTGTGTGCCCAGTTCCAGCATATTTCCTGAGATGGGGTCTCTCACTGAACCTGGAGCACACTGTTTGAGCTAAATTTGCTGGCCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR GCA 90 bp | TGCACTGTCCTGAGACCAGCAGCTCAGGTATACTCGATGTCAGCATaGAGAAGGCTAAAAGCAACCTTCTCCCTTCTCAAACTCATTCTC | + |
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Preference number: 1 (lower is better) Translates to: CTVLRPAAQVYSMSA*RRLKATFSLLKLIL Trigger: GAGAATGAGTTTGAGAAGGGAGAAGGTTGCTTTTAGCCTTCTGCATGCTGACATCGAGTATACCTGAGCTGCTGGTCTCAGGACAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTGGCCAGCATTCCTGTCCTACAGGTaGAGTGGCCTATTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GLGKRSRDRCVPLFWWPAFLSYR*SGLFPS Trigger: GGATGGGAATAGGCCACTTCACCTGTAGGACAGGAA...TGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTGGCCAGCAGCTTCAAGCATGACCTaGAAAGCTGGCTGTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GLGKRSRDRCVPLFWWPAASSMT*KAGCAL Trigger: CAGTGCACAGCCAGCTTTGCAGGTCATGCTTGAAGC...TGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTGGCCAGCAGAGGGCAGACATGTTTaGCAGATTGCTAGGGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: GLGKRSRDRCVPLFWWPAEGRHV*QIARVS Trigger: GCTTACCCTAGCAATCTGGCAAACATGTCTGCCCTC...TGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CAA 90 bp | CCCAGGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTaGGTGGCCAGCAAATTTAGCTCAAACAGTGTGCTCCAGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PRAGKTEQRQVCPTV*VASKFSSNSVLQVQ Trigger: CTGAACCTGGAGCACACTGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGTCTGTGGCCTCTCTCCAGCTCTGCCAATGTCAGCAGGTTTCGCCATCATACTCGATGTCAGCATaGAGAAGGCTAAAAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: LRSVASLQLCQCQQVSPSYSMSA*RRLKAT Trigger: GGTTGCTTTTAGCCTTCTGCATGCTGACATCGAGTA...TGATGGCGAAACCTGCTGACATTGGCAGAGCTGGAGAGAGGCCACAGACCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGCCCTTTGTGATACCCAAGCTAAGCATTGTTAAGGACACAGCAATCCTGGCCTCTCTCCAGCTCTaGCAATGTCAGCAGGTTTCG | + |
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Preference number: 2 (lower is better) Translates to: CGPFVIPKLSIVKDTAILASLQL*QCQQVS Trigger: CGAAACCTGCTGACATTGGCAGAGCTGGAGAGAGGC...CAGGATTGCTGTGTCCTTAACAATGCTTAGCTTGGGTATCACAAAGGGCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGGTATACTCGATGTCAGCATGCAGAAGGCTAAAAGCAACCTTCTCCCTTAAGATGGACTGGAAATaGTGGGACCACGAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: AQVYSMSACRRLKATFSLKMDWK*WDHEAE Trigger: CTCAGCCTCGTGGTCCCAGCATTTCCAGTCCATCTT...AAGGGAGAAGGTTGCTTTTAGCCTTCTGCATGCTGACATCGAGTATACCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCAGCATCCAAGCAGGCATGGTGCAAGCAGAGCTGAGAGTTCTACATCTCTGCTGCTACTAAAATaGCAAAGCCTAGGTCCGAAA | + |
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Preference number: 2 (lower is better) Translates to: AWQHPSRHGASRAESSTSLLLLK*QSLGPK Trigger: TTTCGGACCTAGGCTTTGGCATTTTAGTAGCAGCAG...AGATGTAGAACTCTCAGCTCTGCTTGCACCATGCCTGCTTGGATGCTGCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR GCA 72 bp | GCCCGCGGCTTCAAGCATGACCTGCAAAGCTGGCTGTaGACTGTCCTGAGACCAGCAGCTCAGGTATACTCG | + |
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Preference number: 3 (lower is better) Translates to: ARGFKHDLQSWL*TVLRPAAQVYS Trigger: CGAGTATACCTGAGCTGCTGGTCTCAGGACAGTGCACAGCCAGCTTTGCAGGTCATGCTTGAAGCCGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTGGCCAGCATCCCACAAACTGCCTTaGACCTCTGAACTCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: GLGKRSRDRCVPLFWWPASHKLP*TSELHR Trigger: CCTGTGGAGTTCAGAGGTCAAAGGCAGTTTGTGGGA...TGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR TCA 72 bp | GGCAGTGAGTGCAACGAAAGTAAACTGGTGGGCCAGTaGGCTGGTACAGCAGGTAGAGGGGTTTGCCACCAA | + |
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Preference number: 3 (lower is better) Translates to: GSECNESKLVGQ*AGTAGRGVCHQ Trigger: TTGGTGGCAAACCCCTCTACCTGCTGTACCAGCTCACTGGCCCACCAGTTTACTTTCGTTGCACTCACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR TCA 72 bp | TCAAGCATGACCTGCAAAGCTGGCTGTGCACTGTCCTaGGACCAGCAGCTCAGGTATACTCGATGTCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: SSMTCKAGCALS*DQQLRYTRCQH Trigger: ATGCTGACATCGAGTATACCTGAGCTGCTGGTCTCAGGACAGTGCACAGCCAGCTTTGCAGGTCATGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR GCA 72 bp | GCCAGGGATATCGGGGAGACAGGTCAGTGGGTTAAATaGTTGCTTTGTGAGAATGAGGGCCCAAGTTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: ARDIGETGQWVK*LLCENEGPSLE Trigger: CTCTAAACTTGGGCCCTCATTCTCACAAAGCAAGCATTTAACCCACTGACCTGTCTCCCCGATATCCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CCA 72 bp | GGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTaGTGGCCAGCAAATTTAGCTCAAACAGTGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GKRSRDRCVPLF*WPANLAQTVCS Trigger: GGAGCACACTGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR TCA 72 bp | AAGACAGTTAAGACAAGTGGTACTGCCTGTCTCAGATaGCAGGTGGCTGCTAATCTGGCTGAAGTCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: KTVKTSGTACLR*QVAANLAEVMW Trigger: CCACATGACTTCAGCCAGATTAGCAGCCACCTGTCATCTGAGACAGGCAGTACCACTTGTCTTAACTGTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR GCA 72 bp | CTGAGACCAGCAGCTCAGGTATACTCGATGTCAGCATaGAGAAGGCTAAAAGCAACCTTCTCCCTTCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: LRPAAQVYSMSA*RRLKATFSLLK Trigger: TTTGAGAAGGGAGAAGGTTGCTTTTAGCCTTCTGCATGCTGACATCGAGTATACCTGAGCTGCTGGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR TCA 72 bp | AAATATGCTGGAACTGGGCACACACAAGACCATGCATaGGTGTGCACTCCTTCAGACATACACACACCAAGT | + |
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Preference number: 3 (lower is better) Translates to: KYAGTGHTQDHA*VCTPSDIHTPS Trigger: ACTTGGTGTGTGTATGTCTGAAGGAGTGCACACTCATGCATGGTCTTGTGTGTGCCCAGTTCCAGCATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR TCA 72 bp | AGCAAATTTAGCTCAAACAGTGTGCTCCAGGTTCAGTaGGAGACCCCATCTCAGGAAATATGCTGGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: SKFSSNSVLQVQ*ETPSQEICWNW Trigger: CCAGTTCCAGCATATTTCCTGAGATGGGGTCTCTCACTGAACCTGGAGCACACTGTTTGAGCTAAATTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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| 3UTR CAA 72 bp | GGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTaGGTGGCCAGCAAATTTAGCTCAAACAGTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GKTEQRQVCPTV*VASKFSSNSVL Trigger: GAGCACACTGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092966.5 |
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