Pregenerated sensors for DYNLT1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096255

Ensembl transcript IDs: ENSMUST00000179569.3

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	AGTGCCACAGAACAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTGGTGGTTAATGGACTGGAAATGCTaGGACCACGAGGCTGAGGCT	+
Preference number: 2 (lower is better) Translates to: SATEQLRRKGFAQHSWWLMDWKC*DHEAEA Trigger: AGCCTCAGCCTCGTGGTCCCAGCATTTCCAGTCCAT...TAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTGTTCTGTGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179569.3
3UTR-3UTR CCA 90 bp	GTACTGCCTGGCTCAGATGACAGGTGGCTGCTAATCTGGCTGAAGTCATGTGGTAGCTGGTGGTTAAGATaGACTGGAAATGCTGGGACC	+
Preference number: 2 (lower is better) Translates to: VLPGSDDRWLLIWLKSCGSWWLR*TGNAGT Trigger: GGTCCCAGCATTTCCAGTCCATCTTAACCACCAGCT...ACCACATGACTTCAGCCAGATTAGCAGCCACCTGTCATCTGAGCCAGGCAGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179569.3
3UTR CCA 72 bp	GTACTGCCTGGCTCAGATGACAGGTGGCTGCTAATCTaGCTGAAGTCATGTGGTTCCTGTGACTGGGGAGTC	+
Preference number: 3 (lower is better) Translates to: VLPGSDDRWLLI*LKSCGSCDWGV Trigger: GACTCCCCAGTCACAGGAACCACATGACTTCAGCCAGATTAGCAGCCACCTGTCATCTGAGCCAGGCAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179569.3
3UTR CCA 72 bp	CAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTGGTaGTTAAGATGGACTGGAAATGCTGGGACCACGAGG	+
Preference number: 3 (lower is better) Translates to: QLRRKGFAQHSW*LRWTGNAGTTR Trigger: CCTCGTGGTCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179569.3
3UTR CCA 72 bp	GAACAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTaGTGGTTAAGATGGACTGGAAATGCTGGGACCACG	+
Preference number: 3 (lower is better) Translates to: EQLRRKGFAQHS*WLRWTGNAGTT Trigger: CGTGGTCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179569.3
3UTR CCA 72 bp	TTAAGACAAGTGGTACTGCCTGGCTCAGATGACAGGTaGCTGCTAATCTGGCTGAAGTCATGTGGTTCCTGT	+
Preference number: 3 (lower is better) Translates to: LRQVVLPGSDDR*LLIWLKSCGSC Trigger: ACAGGAACCACATGACTTCAGCCAGATTAGCAGCCACCTGTCATCTGAGCCAGGCAGTACCACTTGTCTTAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179569.3