Pregenerated sensors for DYNLT1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092074Ensembl transcript IDs: ENSMUST00000169415.3, ENSMUST00000232499.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGTCACTTTAGCTCACCGGTCCATGGCTGGCTCCCTCCACCATaGGCCCGGGATGAGGAACACAGTGCCTACAGAGTGTGGCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: ESHFSSPVHGWLPPP*ARDEEHSAYRVWPS Trigger: ACTTGGCCACACTCTGTAGGCACTGTGTTCCTCATCCCGGGCTCATGGTGGAGGGAGCCAGCCATGGACCGGTGAGCTAAAGTGACTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | GGTTTGTGCCACCTGAGGCTGGCAGTGAGTGCAACGAAAGTAAACTaGTGGGCCAGTGAGCTGGTACAGCAGGTAGAGGGGTTTGCCACC | + |
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Preference number: 1 (lower is better) Translates to: GLCHLRLAVSATKVN*WASELVQQVEGFAT Trigger: GGTGGCAAACCCCTCTACCTGCTGTACCAGCTCACTGGCCCACCAGTTTACTTTCGTTGCACTCACTGCCAGCCTCAGGTGGCACAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR GCA 90 bp | CTCTCAGCCCGAGTTGCCATCTCTGCTGAACCATTCGTTGCAAGCTaGAGGCCGGCCGCAACAGGGTTTTACTGCTGTGAACAGACACCA | + |
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Preference number: 1 (lower is better) Translates to: LSARVAISAEPFVAS*RPAATGFYCCEQTP Trigger: TGGTGTCTGTTCACAGCAGTAAAACCCTGTTGCGGCCGGCCTGCAGCTTGCAACGAATGGTTCAGCAGAGATGGCAACTCGGGCTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | TTGTGCCACCTGAGGCTGGCAGTGAGTGCAACGAAAGTAAACTGGTaGGCCAGTGAGCTGGTACAGCAGGTAGAGGGGTTTGCCACCAAC | + |
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Preference number: 1 (lower is better) Translates to: LCHLRLAVSATKVNW*ASELVQQVEGFATN Trigger: GTTGGTGGCAAACCCCTCTACCTGCTGTACCAGCTCACTGGCCCACCAGTTTACTTTCGTTGCACTCACTGCCAGCCTCAGGTGGCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR GCA 90 bp | GAACAAGGCAGAGACCCTCAACCACTAGGGATACTTGCTGTATCCTaGTTCCTTCAGCACGCTCCACCTCCAAGTTCCCAGATCCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: EQGRDPQPLGILAVS*FLQHAPPPSSQILP Trigger: GGGGAGGATCTGGGAACTTGGAGGTGGAGCGTGCTGAAGGAAGCAGGATACAGCAAGTATCCCTAGTGGTTGAGGGTCTCTGCCTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | CAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTGGTGGTTAAGATaGACTGGAAATGCTGGGATCACGAGGCTGAGGCTGGCAAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QLRRKGFAQHSWWLR*TGNAGITRLRLARW Trigger: CCACCTTGCCAGCCTCAGCCTCGTGATCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | GCCACAGAACAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTGGTaGTTAAGATGGACTGGAAATGCTGGGATCACGAGGCTGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ATEQLRRKGFAQHSW*LRWTGNAGITRLRL Trigger: CAGCCTCAGCCTCGTGATCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTGTTCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | AGTGCCACAGAACAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTaGTGGTTAAGATGGACTGGAAATGCTGGGATCACGAGGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SATEQLRRKGFAQHS*WLRWTGNAGITRLR Trigger: CCTCAGCCTCGTGATCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTGTTCTGTGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | GGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTaGCCAGCAAATTTAGCTCAAACATTGTGCTCCAGGTTCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: GLGKRSRDRCVPLFW*PANLAQTLCSRFSE Trigger: CTCACTGAACCTGGAGCACAATGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | CCAGGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTaGTGGCCAGCAAATTTAGCTCAAACATTGTGCTCCAGGTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PGLGKRSRDRCVPLF*WPANLAQTLCSRFS Trigger: ACTGAACCTGGAGCACAATGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | CCACAGCAAGGCTCTTCAGCCAGGGATATCGGGGAGACAGGTCAGTaGGTTAAATGCTTGCTTTGTGAGAATGAGGGCCCAAGTTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: PQQGSSARDIGETGQ*VKCLLCENEGPSLE Trigger: CTCTAAACTTGGGCCCTCATTCTCACAAAGCAAGCATTTAACCCACTGACCTGTCTCCCCGATATCCCTGGCTGAAGAGCCTTGCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | AGACAAGTGGTACTGCCTGGCTCAGATGACAGGTGGCTGCTAATCTaGCTGAAGTCATGTGGTTCCTGTGACTGGGGAGTCATTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: RQVVLPGSDDRWLLI*LKSCGSCDWGVIWF Trigger: AAACCAAATGACTCCCCAGTCACAGGAACCACATGACTTCAGCCAGATTAGCAGCCACCTGTCATCTGAGCCAGGCAGTACCACTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 90 bp | CTTACAGGCTCAGAGGTTCAGTCCATTATCATCAAGGCAGGAGCATaGCAGCATCCAAGCAGGCATGGTGCAAGCAGAGCTGAAAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTGSEVQSIIIKAGA*QHPSRHGASRAESS Trigger: AGAACTTTCAGCTCTGCTTGCACCATGCCTGCTTGGATGCTGCCATGCTCCTGCCTTGATGATAATGGACTGAACCTCTGAGCCTGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTGGCCCCGCGGCTTCAAGCATaGCCTGCAAAGCTGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PRAGKTEQRQVCPTVLVAPRLQA*PAKLAV Trigger: CACAGCCAGCTTTGCAGGTCATGCTTGAAGCCGCGG...GGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR TCA 90 bp | GTCACTTTAGCTCACCGGTCCATGGCTGGCTCCCTCCACCATGAGCCCGGGATGACTGCCTTTGACCTCTaGACTCCACAGGTGTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VTLAHRSMAGSLHHEPGMTAFDL*TPQVCH Trigger: ATGGCACACCTGTGGAGTTCAGAGGTCAAAGGCAGT...CATCCCGGGCTCATGGTGGAGGGAGCCAGCCATGGACCGGTGAGCTAAAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTGGCCAAGATGGACTGGAAATaGTGGGATCACGAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PRAGKTEQRQVCPTVLVAKMDWK*WDHEAE Trigger: CTCAGCCTCGTGATCCCAGCATTTCCAGTCCATCTT...GGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | GTCACTTTAGCTCACCGGTCCATGGCTGGCTCCCTCCACCATGAGCCCGGGATGGTTCTTTTTGCTTCCTaGTTTGTGCCACCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: VTLAHRSMAGSLHHEPGMVLFAS*FVPPEA Trigger: AGCCTCAGGTGGCACAAACCAGGAAGCAAAAAGAAC...CATCCCGGGCTCATGGTGGAGGGAGCCAGCCATGGACCGGTGAGCTAAAGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | GTCACTTTAGCTCACCGGTCCATGGCTGGCTCCCTCCACCATGAGCCCGGGATGGGGGAGACAGGTCAGTaGGTTAAATGCTTGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VTLAHRSMAGSLHHEPGMGETGQ*VKCLLC Trigger: ACAAAGCAAGCATTTAACCCACTGACCTGTCTCCCC...CATCCCGGGCTCATGGTGGAGGGAGCCAGCCATGGACCGGTGAGCTAAAGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | CACTCACCTCCTGGTAGCCAGGACTCAAAGCAGAATGACGGGAAGGGGCCAGAAATGGACTGGAAATGCTaGGATCACGAGGCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HSPPGSQDSKQNDGKGPEMDWKC*DHEAEA Trigger: AGCCTCAGCCTCGTGATCCCAGCATTTCCAGTCCAT...TTCTGGCCCCTTCCCGTCATTCTGCTTTGAGTCCTGGCTACCAGGAGGTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR TCA 90 bp | CACTCACCTCCTGGTAGCCAGGACTCAAAGCAGAATGACGGGAAGGGGCCAGAAACACAAGACCATGCATaGGTGTGCACTCCTTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: HSPPGSQDSKQNDGKGPETQDHA*VCTPSD Trigger: GTCTGAAGGAGTGCACACTCATGCATGGTCTTGTGT...TTCTGGCCCCTTCCCGTCATTCTGCTTTGAGTCCTGGCTACCAGGAGGTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTGGTGGCCTCTCAGGAAATATGCTaGAACTGGGCACACACAAGA | + |
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Preference number: 2 (lower is better) Translates to: PRAGKTEQRQVCPTVLVASQEIC*NWAHTR Trigger: TCTTGTGTGTGCCCAGTTCCAGCATATTTCCTGAGA...GGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CAA 90 bp | CCCAGGGCTGGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTaGGTGGCCAGCAAATTTAGCTCAAACATTGTGCTCCAGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PRAGKTEQRQVCPTV*VASKFSSNIVLQVQ Trigger: CTGAACCTGGAGCACAATGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCCAGCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCACTCCTTCAGACATACACACAGCAAGTGGCAATGCCAATCATAGTGTCGGCTGTGCACTGTCCTaGGACCAGCAGCTCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: VCTPSDIHTASGNANHSVGCALS*DQQLRY Trigger: ATACCTGAGCTGCTGGTCTCAGGACAGTGCACAGCC...GACACTATGATTGGCATTGCCACTTGCTGTGTGTATGTCTGAAGGAGTGCACAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGGGCCAGAACAAGGCAGAGACCCTCAACCACTAGGGATACTTGCTGTACTCCCCAAATGTCACTaGCAGATGAAGAGCAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GKGPEQGRDPQPLGILAVLPKCH*QMKSKC Trigger: ACACTTGCTCTTCATCTGGCAGTGACATTTGGGGAG...TACAGCAAGTATCCCTAGTGGTTGAGGGTCTCTGCCTTGTTCTGGCCCCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | CGCTCCACCTCCAAGTTCCCAGATCCTCCCCAAATGTCACTGCCAGATGAAGAGGAAATATGCTGGAACTaGGCACACACAAGACCATGC | + |
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Preference number: 2 (lower is better) Translates to: RSTSKFPDPPQMSLPDEEEICWN*AHTRPC Trigger: GCATGGTCTTGTGTGTGCCCAGTTCCAGCATATTTC...CTCTTCATCTGGCAGTGACATTTGGGGAGGATCTGGGAACTTGGAGGTGGAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR TCA 90 bp | AAATATGTAGCTGCTGCTGCTACTAAAATGCCAAAGCCTAGGTCCGAAAGCAGCCATCTCGCCCTCTACTaGGAGGGCAGACATGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: KYVAAAATKMPKPRSESSHLALY*EGRHVC Trigger: GCAAACATGTCTGCCCTCTCAGTAGAGGGCGAGATG...GCTGCTTTCGGACCTAGGCTTTGGCATTTTAGTAGCAGCAGCAGCTACATATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGCCAGGGATATCGGGGAGACAGGTCAGTGGGTTAAATGCTTGCTTTGTGGTGGTTAAGATGGACTaGAAATGCTGGGATCACGAG | + |
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Preference number: 2 (lower is better) Translates to: LQPGISGRQVSGLNACFVVVKMD*KCWDHE Trigger: CTCGTGATCCCAGCATTTCCAGTCCATCTTAACCAC...CACAAAGCAAGCATTTAACCCACTGACCTGTCTCCCCGATATCCCTGGCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | GAATGTAGGATTGCAGCATGGCTAGGTTCCTGTCCTACAGGTGAAGTGGCCTATGCAACGAAAGTAAACTaGTGGGCCAGTGAGCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: ECRIAAWLGSCPTGEVAYATKVN*WASELV Trigger: TACCAGCTCACTGGCCCACCAGTTTACTTTCGTTGC...ATAGGCCACTTCACCTGTAGGACAGGAACCTAGCCATGCTGCAATCCTACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGGTATACTCGATGTCAGCATGCAGAAGGCTAAAAGCAACCTTCTCCCTAGCTGGTGGTTAAGATaGACTGGAAATGCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: SSGILDVSMQKAKSNLLPSWWLR*TGNAGI Trigger: GATCCCAGCATTTCCAGTCCATCTTAACCACCAGCT...AGGGAGAAGGTTGCTTTTAGCCTTCTGCATGCTGACATCGAGTATACCTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR GCA 90 bp | AAATATGTAGCTGCTGCTGCTACTAAAATGCCAAAGCCTAGGTCCGAAAGCAGCTCCTCCTGTTCTTTTTaGTTCCTGGTTTGTGCCACC | + |
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Preference number: 2 (lower is better) Translates to: KYVAAAATKMPKPRSESSSSCSF*FLVCAT Trigger: GGTGGCACAAACCAGGAAGCAAAAAGAACAGGAGGA...GCTGCTTTCGGACCTAGGCTTTGGCATTTTAGTAGCAGCAGCAGCTACATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR TCA 90 bp | CATTCTGTGATCTGTCCTGTGACACAGAACAGGTTAATTCCATTGTATGACAGACCCACAAACTGCCTTTaGCCTCTGAACTCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: HSVICPVTQNRLIPLYDRPTNCL*PLNSTG Trigger: ACCTGTGGAGTTCAGAGGTCAAAGGCAGTTTGTGGG...TCTGTCATACAATGGAATTAACCTGTTCTGTGTCACAGGACAGATCACAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CCA 90 bp | CATTCTGTGATCTGTCCTGTGACACAGAACAGGTTAATTCCATTGTATGACAGAATTCCTGGGACCCAGTaGTGGAGAAAGAGCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: HSVICPVTQNRLIPLYDRIPGTQ*WRKSQV Trigger: GACTTGGCTCTTTCTCCACCACTGGGTCCCAGGAAT...TCTGTCATACAATGGAATTAACCTGTTCTGTGTCACAGGACAGATCACAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR TCA 72 bp | GGTCCATGGCTGGCTCCCTCCACCATGAGCCCGGGATaGGGAACACAGTGCCTACAGAGTGTGGCCAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: GPWLAPSTMSPG*GTQCLQSVAKS Trigger: TGACTTGGCCACACTCTGTAGGCACTGTGTTCCTCATCCCGGGCTCATGGTGGAGGGAGCCAGCCATGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | AAACAGGCCCGCGGCTTCAAGCATGACCTGCAAAGCTaGCTGTGCACTGTCCTGAGACCAGCAGCTCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: KQARGFKHDLQS*LCTVLRPAAQV Trigger: TACCTGAGCTGCTGGTCTCAGGACAGTGCACAGCCAGCTTTGCAGGTCATGCTTGAAGCCGCGGGCCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | CACCTGAGGCTGGCAGTGAGTGCAACGAAAGTAAACTaGTGGGCCAGTGAGCTGGTACAGCAGGTAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: HLRLAVSATKVN*WASELVQQVEG Trigger: CCCCTCTACCTGCTGTACCAGCTCACTGGCCCACCAGTTTACTTTCGTTGCACTCACTGCCAGCCTCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR TCA 72 bp | GCTGGTACAGCAGGTAGAGGGGTTTGCCACCAACCCTaGCTACCTAAGTTCATTCCTGGGACCCAGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: AGTAGRGVCHQP*LPKFIPGTQWW Trigger: CCACCACTGGGTCCCAGGAATGAACTTAGGTAGTCAGGGTTGGTGGCAAACCCCTCTACCTGCTGTACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | TGGAAAACGGATGTCACCCACACTGAAGTTCAGCATTaGAAGTCCTCAGGGCCACCGCCTTCCTTCCCGCTC | + |
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Preference number: 3 (lower is better) Translates to: WKTDVTHTEVQH*KSSGPPPSFPL Trigger: GAGCGGGAAGGAAGGCGGTGGCCCTGAGGACTTCCAATGCTGAACTTCAGTGTGGGTGACATCCGTTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232499.2 |
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| 3UTR CCA 72 bp | CTGAGGCTGGCAGTGAGTGCAACGAAAGTAAACTGGTaGGCCAGTGAGCTGGTACAGCAGGTAGAGGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LRLAVSATKVNW*ASELVQQVEGF Trigger: AAACCCCTCTACCTGCTGTACCAGCTCACTGGCCCACCAGTTTACTTTCGTTGCACTCACTGCCAGCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CAA 90 bp | CGCTCCACCTCCAAGTTCCCAGATCCTCCCCAAATGTCACTGCCAGATGAAGAGTTTTTGCTTCCTGGTTaGTGCCACCTGAGGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: RSTSKFPDPPQMSLPDEEFLLPG*CHLRLA Trigger: TGCCAGCCTCAGGTGGCACAAACCAGGAAGCAAAAA...CTCTTCATCTGGCAGTGACATTTGGGGAGGATCTGGGAACTTGGAGGTGGAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | GGCTCTTCAGCCAGGGATATCGGGGAGACAGGTCAGTaGGTTAAATGCTTGCTTTGTGAGAATGAGGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: GSSARDIGETGQ*VKCLLCENEGP Trigger: TGGGCCCTCATTCTCACAAAGCAAGCATTTAACCCACTGACCTGTCTCCCCGATATCCCTGGCTGAAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | GCTAGGGTAAGCTTTCCTCCTGTTCTTTTTGCTTCCTaGTTTGTGCCACCTGAGGCTGGCAGTGAGTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: ARVSFPPVLFAS*FVPPEAGSECN Trigger: GTTGCACTCACTGCCAGCCTCAGGTGGCACAAACCAGGAAGCAAAAAGAACAGGAGGAAAGCTTACCCTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | TCAGAGGTTCAGTCCATTATCATCAAGGCAGGAGCATaGCAGCATCCAAGCAGGCATGGTGCAAGCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SEVQSIIIKAGA*QHPSRHGASRA Trigger: AGCTCTGCTTGCACCATGCCTGCTTGGATGCTGCCATGCTCCTGCCTTGATGATAATGGACTGAACCTCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR TCA 72 bp | AGGCCAAAGGAAAATGGATGTCGTCAGAAGCCTTGCTaGATGTTTCTCTTGGTGGCTCGGGTGCTGCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: RPKENGCRQKPC*MFLLVARVLLG Trigger: ACCTAGCAGCACCCGAGCCACCAAGAGAAACATTCAGCAAGGCTTCTGACGACATCCATTTTCCTTTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR GCA 72 bp | CCACCTCCAAGTTCCCAGATCCTCCCCAAATGTCACTaGCAGATGAAGAGCAAGTGTTTGACACACACCTTG | + |
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Preference number: 3 (lower is better) Translates to: PPPSSQILPKCH*QMKSKCLTHTL Trigger: CAAGGTGTGTGTCAAACACTTGCTCTTCATCTGGCAGTGACATTTGGGGAGGATCTGGGAACTTGGAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR GCA 72 bp | CTGAATGTTTCTCTTGGTGGCTCGGGTGCTGCTAGGTaGTACCATTCTGTGATCTGTCCTGTGACACAGAAC | + |
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Preference number: 3 (lower is better) Translates to: LNVSLGGSGAAR*YHSVICPVTQN Trigger: GTTCTGTGTCACAGGACAGATCACAGAATGGTAGCACCTAGCAGCACCCGAGCCACCAAGAGAAACATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | CAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTGGTaGTTAAGATGGACTGGAAATGCTGGGATCACGAGG | + |
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Preference number: 3 (lower is better) Translates to: QLRRKGFAQHSW*LRWTGNAGITR Trigger: CCTCGTGATCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | GAACAACTTAGGAGGAAGGGGTTTGCCCAACATAGCTaGTGGTTAAGATGGACTGGAAATGCTGGGATCACG | + |
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Preference number: 3 (lower is better) Translates to: EQLRRKGFAQHS*WLRWTGNAGIT Trigger: CGTGATCCCAGCATTTCCAGTCCATCTTAACCACCAGCTATGTTGGGCAAACCCCTTCCTCCTAAGTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CCA 72 bp | GGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTTaGTGGCCAGCAAATTTAGCTCAAACATTGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GKRSRDRCVPLF*WPANLAQTLCS Trigger: GGAGCACAATGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CAA 90 bp | CCAGATCCTCCCCAAATGTCACTGCCAGATGAAGAGCAAGTGTTTGACACACACTTCCTCCTGTTCTTTTaGCTTCCTGGTTTGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: PDPPQMSLPDEEQVFDTHFLLFF*LPGLCH Trigger: GTGGCACAAACCAGGAAGCAAAAAGAACAGGAGGAA...GTGTGTGTCAAACACTTGCTCTTCATCTGGCAGTGACATTTGGGGAGGATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR-3UTR CAA 90 bp | CCAGATCCTCCCCAAATGTCACTGCCAGATGAAGAGCAAGTGTTTGACACACACAATTTAGCTCAAACATaGTGCTCCAGGTTCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PDPPQMSLPDEEQVFDTHNLAQT*CSRFSE Trigger: CTCACTGAACCTGGAGCACAATGTTTGAGCTAAATT...GTGTGTGTCAAACACTTGCTCTTCATCTGGCAGTGACATTTGGGGAGGATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR TCA 72 bp | AAATATGCTGGAACTGGGCACACACAAGACCATGCATaGGTGTGCACTCCTTCAGACATACACACAGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: KYAGTGHTQDHA*VCTPSDIHTAS Trigger: ACTTGCTGTGTGTATGTCTGAAGGAGTGCACACTCATGCATGGTCTTGTGTGTGCCCAGTTCCAGCATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR TCA 72 bp | CTGTCCTGTGACACAGAACAGGTTAATTCCATTGTATaGCAGAGGGATTTTCTGCTCCTGAAAACTACCTTT | + |
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Preference number: 3 (lower is better) Translates to: LSCDTEQVNSIV*QRDFLLLKTTF Trigger: AAAGGTAGTTTTCAGGAGCAGAAAATCCCTCTGTCATACAATGGAATTAACCTGTTCTGTGTCACAGGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| CDS-3UTR TCA 90 bp | GAAGTTCAGCATTGGAAGTCCTCAGGGCCACCGCCTTCCTTCCCGCTCCTCAGTGTCTCCCCAGTTTGGTaGGTTGGCTCAAAGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: EVQHWKSSGPPPSFPLLSVSPVW*VGSKSV Trigger: AACAGACTTTGAGCCAACTCACCAAACTGGGGAGAC...ACTGAGGAGCGGGAAGGAAGGCGGTGGCCCTGAGGACTTCCAATGCTGAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232499.2 |
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| 3UTR CAA 72 bp | AGTGGTGGAGAAAGAGCCAAGTCCCACAAACTGCCTTaGACCTCTGAACTCCACAGGTGTGCCATGGGACGC | + |
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Preference number: 4 (lower is better) Translates to: SGGERAKSHKLP*TSELHRCAMGR Trigger: GCGTCCCATGGCACACCTGTGGAGTTCAGAGGTCAAAGGCAGTTTGTGGGACTTGGCTCTTTCTCCACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| CDS-3UTR GCA 90 bp | ACTGAAGTTCAGCATTGGAAGTCCTCAGGGCCACCGCCTTCCTTCCCGCTCCTCTTCATCAACAACAAATaGAGTCTCCTCGGAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TEVQHWKSSGPPPSFPLLFINNK*SLLGGL Trigger: CAGGCCTCCGAGGAGACTGCATTTGTTGTTGATGAA...GAGGAGCGGGAAGGAAGGCGGTGGCCCTGAGGACTTCCAATGCTGAACTTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232499.2 |
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| CDS-3UTR TCA 90 bp | CGCTCCACCTCCAAGTTCCCAGATCCTCCCCAAATGTCACTGCCAGATGAAGAGGTCTCCCCAGTTTGGTaGGTTGGCTCAAAGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RSTSKFPDPPQMSLPDEEVSPVW*VGSKSV Trigger: AACAGACTTTGAGCCAACTCACCAAACTGGGGAGAC...CTCTTCATCTGGCAGTGACATTTGGGGAGGATCTGGGAACTTGGAGGTGGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CAA 72 bp | GGGAAAACGGAGCAGAGACAGGTGTGTCCCACTGTTTaGGTGGCCAGCAAATTTAGCTCAAACATTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GKTEQRQVCPTV*VASKFSSNIVL Trigger: GAGCACAATGTTTGAGCTAAATTTGCTGGCCACCAAAACAGTGGGACACACCTGTCTCTGCTCCGTTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| 3UTR CAA 72 bp | AGGGATATCGGGGAGACAGGTCAGTGGGTTAAATGCTaGCTTTGTGAGAATGAGGGCCCAAGTTTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RDIGETGQWVKC*LCENEGPSLEL Trigger: CAGCTCTAAACTTGGGCCCTCATTCTCACAAAGCAAGCATTTAACCCACTGACCTGTCTCCCCGATATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| CDS-3UTR GCA 90 bp | CATTCTGTGATCTGTCCTGTGACACAGAACAGGTTAATTCCATTGTATGACAGATTCATCAACAACAAATaGAGTCTCCTCGGAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HSVICPVTQNRLIPLYDRFINNK*SLLGGL Trigger: CAGGCCTCCGAGGAGACTGCATTTGTTGTTGATGAA...TCTGTCATACAATGGAATTAACCTGTTCTGTGTCACAGGACAGATCACAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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| CDS-3UTR CAA 90 bp | GAAGTTCAGCATTGGAAGTCCTCAGGGCCACCGCCTTCCTTCCCGCTCCTCAGTAATGGTCTCCCCAGTTaGGTGAGTTGGCTCAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: EVQHWKSSGPPPSFPLLSNGLPS*VSWLKV Trigger: GACTTTGAGCCAACTCACCAAACTGGGGAGACCATT...ACTGAGGAGCGGGAAGGAAGGCGGTGGCCCTGAGGACTTCCAATGCTGAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232499.2 |
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| CDS-3UTR CAA 90 bp | CGCTCCACCTCCAAGTTCCCAGATCCTCCCCAAATGTCACTGCCAGATGAAGAGAATGGTCTCCCCAGTTaGGTGAGTTGGCTCAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: RSTSKFPDPPQMSLPDEENGLPS*VSWLKV Trigger: GACTTTGAGCCAACTCACCAAACTGGGGAGACCATT...CTCTTCATCTGGCAGTGACATTTGGGGAGGATCTGGGAACTTGGAGGTGGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169415.3 |
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