Pregenerated sensors for DYNLRB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034467Ensembl transcript IDs: ENSMUST00000078170.7, ENSMUST00000213007.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAACAGGAGAACACATCTCTGGACTCAGTCAGGGTACAATATCATaGATTCGTGGAGGGAAGGGCTTCCAGGTATCGTCAGGAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: KTGEHISGLSQGTIS*IRGGKGFQVSSGGQ Trigger: CTGTCCTCCTGACGATACCTGGAAGCCCTTCCCTCCACGAATCCATGATATTGTACCCTGACTGAGTCCAGAGATGTGTTCTCCTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| 3UTR CCA 90 bp | AAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTaGACTCAGTCAGGGTACAATATCATGGATTCGTGGAGGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: KQVVQFHCQNRRTHL*TQSGYNIMDSWREG Trigger: CCCTTCCCTCCACGAATCCATGATATTGTACCCTGACTGAGTCCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| 3UTR CAA 90 bp | ATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCATaGTCAAAACAGGAGAACACATCTCTGGACTCAGTCAGGGTACAA | + |
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Preference number: 2 (lower is better) Translates to: ITIQRGLREASSAVP*SKQENTSLDSVRVQ Trigger: TTGTACCCTGACTGAGTCCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTACAAGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCAAATATCATGGATTCGTaGAGGGAAGGGCTTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KYKITIQRGLREASSAVPNIMDS*REGLPG Trigger: ACCTGGAAGCCCTTCCCTCCACGAATCCATGATATT...TGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCTTGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAAGTACAAGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGAGGAGAACACATCTCTaGACTCAGTCAGGGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: SKSTRSQFKGDLGKQVVQRRTHL*TQSGYN Trigger: ATTGTACCCTGACTGAGTCCAGAGATGTGTTCTCCT...CTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCTTGTACTTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| 3UTR-3UTR CCA 90 bp | ATACAGCAAAAGTACAAGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTAATATCATGGATTCGTaGAGGGAAGGGCTTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: IQQKYKITIQRGLREASSNIMDS*REGLPG Trigger: ACCTGGAAGCCCTTCCCTCCACGAATCCATGATATT...ACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCTTGTACTTTTGCTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| 3UTR-3UTR CCA 90 bp | ATACAGCAAAAGTACAAGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTAGGAGAACACATCTCTaGACTCAGTCAGGGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: IQQKYKITIQRGLREASSRRTHL*TQSGYN Trigger: ATTGTACCCTGACTGAGTCCAGAGATGTGTTCTCCT...ACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCTTGTACTTTTGCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| 3UTR CCA 72 bp | GAACACATCTCTGGACTCAGTCAGGGTACAATATCATaGATTCGTGGAGGGAAGGGCTTCCAGGTATCGTCA | + |
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Preference number: 3 (lower is better) Translates to: EHISGLSQGTIS*IRGGKGFQVSS Trigger: TGACGATACCTGGAAGCCCTTCCCTCCACGAATCCATGATATTGTACCCTGACTGAGTCCAGAGATGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CCA 90 bp | ATGGATTCGTGGAGGGAAGGGCTTCCAGGTATCGTCAGGAGGACAGGGTTGGTCGCTTTCATGGTCAGCTaGTGGAGAAGACCCGCATAC | + |
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Preference number: 4 (lower is better) Translates to: MDSWREGLPGIVRRTGLVAFMVS*WRRPAY Trigger: GTATGCGGGTCTTCTCCACCAGCTGACCATGAAAGC...GACCAACCCTGTCCTCCTGACGATACCTGGAAGCCCTTCCCTCCACGAATCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CCA 90 bp | GGATTCGTGGAGGGAAGGGCTTCCAGGTATCGTCAGGAGGACAGGGTTGGTCACCATACTGAACCGTTGTaGAGTTGTCCAGGGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GFVEGRASRYRQEDRVGHHTEPL*SCPGLF Trigger: GAACAACCCTGGACAACTCCACAACGGTTCAGTATG...GTGACCAACCCTGTCCTCCTGACGATACCTGGAAGCCCTTCCCTCCACGAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | GTACAATATCATGGATTCGTGGAGGGAAGGGCTTCCAGGTATCGTCAGGAGGACCCGATGACCCCTTTGTaGCTCTGGATTCTCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VQYHGFVEGRASRYRQEDPMTPL*LWILLR Trigger: CCTCAAGAGAATCCAGAGTCACAAAGGGGTCATCGG...GTCCTCCTGACGATACCTGGAAGCCCTTCCCTCCACGAATCCATGATATTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | GGGTACAATATCATGGATTCGTGGAGGGAAGGGCTTCCAGGTATCGTCAGGAGGGTTCTGGGGCTACCATaGTTTCATGTTTCTTCGATC | + |
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Preference number: 4 (lower is better) Translates to: GYNIMDSWREGLPGIVRRVLGLP*FHVSSI Trigger: GATCGAAGAAACATGAAATCATGGTAGCCCCAGAAC...CCTCCTGACGATACCTGGAAGCCCTTCCCTCCACGAATCCATGATATTGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213007.2 |
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| CDS-3UTR CCA 90 bp | TGGACTCAGTCAGGGTACAATATCATGGATTCGTGGAGGGAAGGGCTTCCAGGTAAAGTCAGGTCGTTCTaGGGGTCAATATCCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: WTQSGYNIMDSWREGLPGKVRSF*GSISLT Trigger: AGTCAGGGATATTGACCCCCAGAACGACCTGACTTT...ACCTGGAAGCCCTTCCCTCCACGAATCCATGATATTGTACCCTGACTGAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTGGACTGGGGGTCAATATCCCTaGCTGTGCTCTTGGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GKQVVQFHCQNRRTHLWTGGQYP*LCSWLS Trigger: TGAAAGCCAAGAGCACAGTCAGGGATATTGACCCCC...AGTCCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | GCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTGGACTCAGTCGACTCTGGATTCTCTTaGGGGTTTCCTCCACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ASSAVPLSKQENTSLDSVDSGFS*GFPPLL Trigger: CAGAAGTGGAGGAAACCCTCAAGAGAATCCAGAGTC...GACTGAGTCCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | TTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTGGCCGATGACCCCTTTGTaGCTCTGGATTCTCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGKQVVQFHCQNRRTHLWPMTPL*LWILLR Trigger: CCTCAAGAGAATCCAGAGTCACAAAGGGGTCATCGG...CCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | AGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAACCACCATCGTTCCGATaGCCCCTTTGTGACTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RSQFKGDLGKQVVQFHCQPPSFR*PLCDSG Trigger: TCCAGAGTCACAAAGGGGTCATCGGAACGATGGTGG...TTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | CAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGGGGGGTCAATATCCCTaGCTGTGCTCTTGGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QFKGDLGKQVVQFHCQNRGGQYP*LCSWLS Trigger: TGAAAGCCAAGAGCACAGTCAGGGATATTGACCCCC...CCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTG 48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTGGACTCAGGGTTGTTCGGATTaGAATGCCTTCTGCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: GKQVVQFHCQNRRTHLWTQGCSD*NAFCID Trigger: GTCAATGCAGAAGGCATTCCAATCCGAACAACCCTG...AGTCCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | AGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAGACTCTGGATTCTCTTaGGGGTTTCCTCCACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RSQFKGDLGKQVVQFHCQDSGFS*GFPPLL Trigger: CAGAAGTGGAGGAAACCCTCAAGAGAATCCAGAGTC...TTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR GCA 90 bp | CAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGGATTGGAATGCCTTCTaGATTGACCACCATCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QFKGDLGKQVVQFHCQNRDWNAF*IDHHRS Trigger: GGAACGATGGTGGTCAATGCAGAAGGCATTCCAATC...CCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CCA 90 bp | TTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTGGCAGGGTTGTTCGGATTaGAATGCCTTCTGCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: LGKQVVQFHCQNRRTHLWQGCSD*NAFCID Trigger: GTCAATGCAGAAGGCATTCCAATCCGAACAACCCTG...CCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CCA 90 bp | CAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGCATACTGAACCGTTGTaGAGTTGTCCAGGGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: QFKGDLGKQVVQFHCQNRHTEPL*SCPGLF Trigger: GAACAACCCTGGACAACTCCACAACGGTTCAGTATG...CCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CCA 90 bp | GGACTTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTAAAGTCAGGTCGTTCTaGGGGTCAATATCCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: GLREASSAVPLSKQENTSKVRSF*GSISLT Trigger: AGTCAGGGATATTGACCCCCAGAACGACCTGACTTT...AGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR TCA 90 bp | TTAGGGAAGCAAGTAGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTGGTATCTGGGGCTACCATaGTTTCATGTTTCTTCGATC | + |
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Preference number: 4 (lower is better) Translates to: LGKQVVQFHCQNRRTHLWYLGLP*FHVSSI Trigger: GATCGAAGAAACATGAAATCATGGTAGCCCCAGATA...CCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078170.7 |
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| CDS-3UTR TCA 90 bp | AGTGCAGTTCCATTGTCAAAACAGGAGAACACATCTCTGGACTCAGTCAGGGTATACTCACATGGGTTCTaGATGACAATCAGAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: SAVPLSKQENTSLDSVRVYSHGF*MTIRRY Trigger: ATATCTTCTGATTGTCATTCAGAACCCATGTGAGTA...TACCCTGACTGAGTCCAGAGATGTGTTCTCCTGTTTTGACAATGGAACTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078170.7 |
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| CDS-3UTR GCA 90 bp | TTATACAGCAAAAGTACAAGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGATTGGAATGCCTTCTaGATTGACCACCATCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LYSKSTRSQFKGDLGKQVDWNAF*IDHHRS Trigger: GGAACGATGGTGGTCAATGCAGAAGGCATTCCAATC...TACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCTTGTACTTTTGCTGTATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CAA 90 bp | TTCGTGGAGGGAAGGGCTTCCAGGTATCGTCAGGAGGACAGGGTTGGTCACAGCTCCCTGACTGTGCTCTaGGCTTTCATGGTCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FVEGRASRYRQEDRVGHSSLTVL*AFMVSW Trigger: CCAGCTGACCATGAAAGCCAAGAGCACAGTCAGGGA...GCTGTGACCAACCCTGTCCTCCTGACGATACCTGGAAGCCCTTCCCTCCACGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS TCA 90 bp | GTGCTCTTGGCTTTCATGGTCAGCTGGTGGAGAAGACCCGCATACTaGACCGTTGTGGAGTTGTCCAGGGTTGTTCGGATTGGAATGCCT | + |
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Preference number: 5 (lower is better) Translates to: VLLAFMVSWWRRPAY*TVVELSRVVRIGMP Trigger: AGGCATTCCAATCCGAACAACCCTGGACAACTCCACAACGGTTCAGTATGCGGGTCTTCTCCACCAGCTGACCATGAAAGCCAAGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CAA 90 bp | GGGTACAATATCATGGATTCGTGGAGGGAAGGGCTTCCAGGTATCGTCAGGAGGGGAATGCCTTCTGCATaGACCACCATCGTTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: GYNIMDSWREGLPGIVRRGMPSA*TTIVPM Trigger: CATCGGAACGATGGTGGTCAATGCAGAAGGCATTCC...CCTCCTGACGATACCTGGAAGCCCTTCCCTCCACGAATCCATGATATTGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CAA 90 bp | AAGTACAAGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGCAGTTCCATCCCTGACTGTGCTCTaGGCTTTCATGGTCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KYKITIQRGLREASSAVPSLTVL*AFMVSW Trigger: CCAGCTGACCATGAAAGCCAAGAGCACAGTCAGGGA...TGGAACTGCACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCTTGTACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS CCA 90 bp | ATTTCATGTTTCTTCGATCTGATCCTAAGAAAAGTCAGGTCGTTCTaGGGGTCAATATCCCTGACTGTGCTCTTGGCTTTCATGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ISCFFDLILRKVRSF*GSISLTVLLAFMVS Trigger: GCTGACCATGAAAGCCAAGAGCACAGTCAGGGATATTGACCCCCAGAACGACCTGACTTTTCTTAGGATCAGATCGAAGAAACATGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS-3UTR CAA 90 bp | ATACAGCAAAAGTACAAGATCACAATTCAAAGGGGACTTAGGGAAGCAAGTAGTGGAATGCCTTCTGCATaGACCACCATCGTTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: IQQKYKITIQRGLREASSGMPSA*TTIVPM Trigger: CATCGGAACGATGGTGGTCAATGCAGAAGGCATTCC...ACTACTTGCTTCCCTAAGTCCCCTTTGAATTGTGATCTTGTACTTTTGCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS CAA 72 bp | TGGTCAGCTGGTGGAGAAGACCCGCATACTGAACCGTaGTGGAGTTGTCCAGGGTTGTTCGGATTGGAATGC | + |
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Preference number: 6 (lower is better) Translates to: WSAGGEDPHTEP*WSCPGLFGLEC Trigger: GCATTCCAATCCGAACAACCCTGGACAACTCCACAACGGTTCAGTATGCGGGTCTTCTCCACCAGCTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS TCA 72 bp | GCTTTCATGGTCAGCTGGTGGAGAAGACCCGCATACTaGACCGTTGTGGAGTTGTCCAGGGTTGTTCGGATT | + |
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Preference number: 6 (lower is better) Translates to: AFMVSWWRRPAY*TVVELSRVVRI Trigger: AATCCGAACAACCCTGGACAACTCCACAACGGTTCAGTATGCGGGTCTTCTCCACCAGCTGACCATGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS CCA 72 bp | TCAGCTGGTGGAGAAGACCCGCATACTGAACCGTTGTaGAGTTGTCCAGGGTTGTTCGGATTGGAATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SAGGEDPHTEPL*SCPGLFGLECL Trigger: AAGGCATTCCAATCCGAACAACCCTGGACAACTCCACAACGGTTCAGTATGCGGGTCTTCTCCACCAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS CAA 90 bp | TGGCTTTCATGGTCAGCTGGTGGAGAAGACCCGCATACTGAACCGTaGTGGAGTTGTCCAGGGTTGTTCGGATTGGAATGCCTTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: WLSWSAGGEDPHTEP*WSCPGLFGLECLLH Trigger: ATGCAGAAGGCATTCCAATCCGAACAACCCTGGACAACTCCACAACGGTTCAGTATGCGGGTCTTCTCCACCAGCTGACCATGAAAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS TCA 72 bp | TCTGCATTGACCACCATCGTTCCGATGACCCCTTTGTaGCTCTGGATTCTCTTGAGGGTTTCCTCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SALTTIVPMTPL*LWILLRVSSTS Trigger: AGAAGTGGAGGAAACCCTCAAGAGAATCCAGAGTCACAAAGGGGTCATCGGAACGATGGTGGTCAATGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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| CDS CCA 72 bp | TTCTTCGATCTGATCCTAAGAAAAGTCAGGTCGTTCTaGGGGTCAATATCCCTGACTGTGCTCTTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FFDLILRKVRSF*GSISLTVLLAF Trigger: GAAAGCCAAGAGCACAGTCAGGGATATTGACCCCCAGAACGACCTGACTTTTCTTAGGATCAGATCGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078170.7 ENSMUST00000213007.2 |
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