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Pregenerated sensors for DYNLL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000009013

Ensembl transcript IDs: ENSMUST00000009157.4

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGGCTCTCCGTAAGAAGCATAGTGAAGTGTGGGCTGGCTGCCTaGGCCTCTACCTGCAGGAGTCTCCTATGCAGGCCTCTCCTTGGG +
Preference number: 1 (lower is better)
Translates to: LRLSVRSIVKCGLAA*ASTCRSLLCRPLLG
Trigger: CCCAAGGAGAGGCCTGCATAGGAGACTCCTGCAGGTAGAGGCCCAGGCAGCCAGCCCACACTTCACTATGCTTCTTACGGAGAGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR GCA 90 bp AGACTCTCAGTGTCCAGCCACGCGGTCTCGCGTGGCACTGGGGACTaGTACTGGAGACTTAGCAATTACAGTCTGATGGCCAAAACTAGT +
Preference number: 1 (lower is better)
Translates to: RLSVSSHAVSRGTGD*YWRLSNYSLMAKTS
Trigger: ACTAGTTTTGGCCATCAGACTGTAATTGCTAAGTCTCCAGTAGCAGTCCCCAGTGCCACGCGAGACCGCGTGGCTGGACACTGAGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR TCA 90 bp CGCGTGGCACTGGGGACTGCTACTGGAGACTTAGCAATTACAGTCTaGTGGCCAAAACTAGTCAGGTCACAAGGAGGAAGAGGGACTCCA +
Preference number: 1 (lower is better)
Translates to: RVALGTATGDLAITV*WPKLVRSQGGRGTP
Trigger: TGGAGTCCCTCTTCCTCCTTGTGACCTGACTAGTTTTGGCCATCAGACTGTAATTGCTAAGTCTCCAGTAGCAGTCCCCAGTGCCACGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CCA 90 bp GACAGGAACAGGGCCTCAGACCTGTGGCTAATAATCCAAATCATCTaGAAAGACAGGTGTGGCCTGCCAGACATTCCATCAAGAGAACTA +
Preference number: 1 (lower is better)
Translates to: DRNRASDLWLIIQII*KDRCGLPDIPSREL
Trigger: TAGTTCTCTTGATGGAATGTCTGGCAGGCCACACCTGTCTTTCCAGATGATTTGGATTATTAGCCACAGGTCTGAGGCCCTGTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR TCA 90 bp CACCATCAAACCAATTTTATTTCTATAGCAACATGTTCTCACATCTaGACCCGAAAATACAAGTCACCAGCTCCTGACAGCAAACAAAGC +
Preference number: 1 (lower is better)
Translates to: HHQTNFISIATCSHI*TRKYKSPAPDSKQS
Trigger: GCTTTGTTTGCTGTCAGGAGCTGGTGACTTGTATTTTCGGGTTCAGATGTGAGAACATGTTGCTATAGAAATAAAATTGGTTTGATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR TCA 90 bp AGAAGCATAGTGAAGTGTGGGCTGGCTGCCTGGGCCTCTACCTGCAGGAGTCTCTCTGAGCACAGCCAGTaGAAGCAGCAGCCTAGCAAA +
Preference number: 2 (lower is better)
Translates to: RSIVKCGLAAWASTCRSLSEHSQ*KQQPSK
Trigger: TTTGCTAGGCTGCTGCTTTCACTGGCTGTGCTCAGA...GAGACTCCTGCAGGTAGAGGCCCAGGCAGCCAGCCCACACTTCACTATGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR GCA 90 bp CTCACATCTGAACCCGAAAATACAAGTCACCAGCTCCTGACAGCAAACAAAGCCGCCTGGGCCTCTACCTaGAGGAGTCTCCTATGCAGG +
Preference number: 2 (lower is better)
Translates to: LTSEPENTSHQLLTANKAAWAST*RSLLCR
Trigger: CCTGCATAGGAGACTCCTGCAGGTAGAGGCCCAGGC...GGCTTTGTTTGCTGTCAGGAGCTGGTGACTTGTATTTTCGGGTTCAGATGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CAA 90 bp AACGGTAAAACAATCAGGAGGGGTGCCCATCTGCAATCCCAGTACTaGGCAGGGACAAAGGAACATTTAAGGTTGCCAGGCAGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: NGKTIRRGAHLQSQY*AGTKEHLRLPGSGG
Trigger: GCCACCACTGCCTGGCAACCTTAAATGTTCCTTTGTCCCTGCCAAGTACTGGGATTGCAGATGGGCACCCCTCCTGATTGTTTTACCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR GCA 90 bp AAACTAGTCAGGTCACAAGGAGGAAGAGGGACTCCATTCATGCAAACAGTTTTAGAAGTGTGGGCTGGCTaGCTGGGCCTCTACCTGCAG +
Preference number: 2 (lower is better)
Translates to: KLVRSQGGRGTPFMQTVLEVWAG*LGLYLQ
Trigger: CTGCAGGTAGAGGCCCAGGCAGCCAGCCCACACTTC...TAAAACTGTTTGCATGAATGGAGTCCCTCTTCCTCCTTGTGACCTGACTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR CCA 90 bp CACACTCCTGGTCCTGACAGAACACAATGTCTGACCAAGTTCAGCTTACAAAGCATGCAGGCCTCTCCTTaGGTTACAGTAGCTCCAACT +
Preference number: 2 (lower is better)
Translates to: HTPGPDRTQCLTKFSLQSMQASP*VTVAPT
Trigger: AGTTGGAGCTACTGTAACCCAAGGAGAGGCCTGCAT...GCTTTGTAAGCTGAACTTGGTCAGACATTGTGTTCTGTCAGGACCAGGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR TCA 90 bp CCTCAGACAACAGACCAAGTCACTTACCAACTGCTAAGCCTCATCAACCCTATCGACTTGTACAGAGAATaGAGCCCTGTACACAACACA +
Preference number: 2 (lower is better)
Translates to: PQTTDQVTYQLLSLINPIDLYRE*SPVHNT
Trigger: TGTGTTGTGTACAGGGCTTCATTCTCTGTACAAGTC...GATAGGGTTGATGAGGCTTAGCAGTTGGTAAGTGACTTGGTCTGTTGTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR TCA 90 bp TGGAGACTTAGCAATTACAGTCTGATGGCCAAAACTAGTCAGGTCACAAGGAGGAACCATGACATAGTTTaGGGCCAGGACTGGATTTCC +
Preference number: 2 (lower is better)
Translates to: WRLSNYSLMAKTSQVTRRNHDIV*GQDWIS
Trigger: GGAAATCCAGTCCTGGCCTCAAACTATGTCATGGTT...CCTCCTTGTGACCTGACTAGTTTTGGCCATCAGACTGTAATTGCTAAGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR CCA 90 bp CCTGGTCCTGACAGAACACAATGTCTGACCAAGTTCAGCTTACAAAGCTGTCCTATAATCCAAATCATCTaGAAAGACAGGTGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PGPDRTQCLTKFSLQSCPIIQII*KDRCGL
Trigger: CAGGCCACACCTGTCTTTCCAGATGATTTGGATTAT...AGGACAGCTTTGTAAGCTGAACTTGGTCAGACATTGTGTTCTGTCAGGACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR CCA 90 bp AAACTAGTCAGGTCACAAGGAGGAAGAGGGACTCCATTCATGCAAACAGTTTTAAAGGTTGCCAGGCAGTaGTGGCGCATACCTTTAATC +
Preference number: 2 (lower is better)
Translates to: KLVRSQGGRGTPFMQTVLKVARQ*WRIPLI
Trigger: GATTAAAGGTATGCGCCACCACTGCCTGGCAACCTT...TAAAACTGTTTGCATGAATGGAGTCCCTCTTCCTCCTTGTGACCTGACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR TCA 90 bp CACATGACTCCAAGTACCCCATTGTTTCTGCAGATAGTAGGAGAGGCATGTCTAACAGAACACAATGTCTaGCCAAGTTCAGCTTACAAA +
Preference number: 2 (lower is better)
Translates to: HMTPSTPLFLQIVGEACLTEHNV*PSSAYK
Trigger: TTTGTAAGCTGAACTTGGTCAGACATTGTGTTCTGT...TAGACATGCCTCTCCTACTATCTGCAGAAACAATGGGGTACTTGGAGTCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR-3UTR CCA 90 bp AAACTAGTCAGGTCACAAGGAGGAAGAGGGACTCCATTCATGCAAACAGTTTTATTGCAAGATGGCTTATaGAATAGACTTGCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: KLVRSQGGRGTPFMQTVLLQDGL*NRLAAE
Trigger: CTCAGCAGCAAGTCTATTCCATAAGCCATCTTGCAA...TAAAACTGTTTGCATGAATGGAGTCCCTCTTCCTCCTTGTGACCTGACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR GCA 72 bp TGTGGTCGGTCCGCTAATCCAGGGCCGCCTAGAACCTaGTCTACTCCTTCCTTAGCTTCCCAAGTGCTAGGC +
Preference number: 3 (lower is better)
Translates to: CGRSANPGPPRT*STPSLASQVLG
Trigger: GCCTAGCACTTGGGAAGCTAAGGAAGGAGTAGAGCAGGTTCTAGGCGGCCCTGGATTAGCGGACCGACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR GCA 72 bp ATAGTGAAGTGTGGGCTGGCTGCCTGGGCCTCTACCTaGAGGAGTCTCCTATGCAGGCCTCTCCTTGGGTTA +
Preference number: 3 (lower is better)
Translates to: IVKCGLAAWAST*RSLLCRPLLGL
Trigger: TAACCCAAGGAGAGGCCTGCATAGGAGACTCCTGCAGGTAGAGGCCCAGGCAGCCAGCCCACACTTCACTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CCA 72 bp TCCGTAAGAAGCATAGTGAAGTGTGGGCTGGCTGCCTaGGCCTCTACCTGCAGGAGTCTCCTATGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: SVRSIVKCGLAA*ASTCRSLLCRP
Trigger: AGGCCTGCATAGGAGACTCCTGCAGGTAGAGGCCCAGGCAGCCAGCCCACACTTCACTATGCTTCTTACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CCA 72 bp TGTCCTGAGGCTCTCCGTAAGAAGCATAGTGAAGTGTaGGCTGGCTGCCTGGGCCTCTACCTGCAGGAGTCT +
Preference number: 3 (lower is better)
Translates to: CPEALRKKHSEV*AGCLGLYLQES
Trigger: AGACTCCTGCAGGTAGAGGCCCAGGCAGCCAGCCCACACTTCACTATGCTTCTTACGGAGAGCCTCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR TCA 72 bp TGCTCTACTCCTTCCTTAGCTTCCCAAGTGCTAGGCTaGCAGGAACAGGGCCTCAGACCTGTGGCTAATAAT +
Preference number: 3 (lower is better)
Translates to: CSTPSLASQVLG*QEQGLRPVANN
Trigger: ATTATTAGCCACAGGTCTGAGGCCCTGTTCCTGTCAGCCTAGCACTTGGGAAGCTAAGGAAGGAGTAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CCA 72 bp AGGGCCTCAGACCTGTGGCTAATAATCCAAATCATCTaGAAAGACAGGTGTGGCCTGCCAGACATTCCATCA +
Preference number: 3 (lower is better)
Translates to: RASDLWLIIQII*KDRCGLPDIPS
Trigger: TGATGGAATGTCTGGCAGGCCACACCTGTCTTTCCAGATGATTTGGATTATTAGCCACAGGTCTGAGGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR TCA 72 bp GCACACACCAACAGCAAAGTCTCACACTCCTGGTCCTaGCAGAACACAATGTCTGACCAAGTTCAGCTTACA +
Preference number: 3 (lower is better)
Translates to: AHTNSKVSHSWS*QNTMSDQVQLT
Trigger: TGTAAGCTGAACTTGGTCAGACATTGTGTTCTGTCAGGACCAGGAGTGTGAGACTTTGCTGTTGGTGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR TCA 72 bp CTGCTGAGTCTTAGAATCTACACAGTAGAGAATCACTaGCTGCGCACACACCAACAGCAAAGTCTCACACTC +
Preference number: 3 (lower is better)
Translates to: LLSLRIYTVENH*LRTHQQQSLTL
Trigger: GAGTGTGAGACTTTGCTGTTGGTGTGTGCGCAGTCAGTGATTCTCTACTGTGTAGATTCTAAGACTCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR TCA 72 bp TCACATCTGAACCCGAAAATACAAGTCACCAGCTCCTaGCAGCAAACAAAGCCTGATCAAGTTAGACTCTCA +
Preference number: 3 (lower is better)
Translates to: SHLNPKIQVTSS*QQTKPDQVRLS
Trigger: TGAGAGTCTAACTTGATCAGGCTTTGTTTGCTGTCAGGAGCTGGTGACTTGTATTTTCGGGTTCAGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
CDS-3UTR TCA 90 bp CTGACTGCGCACACACCAACAGCAAAGTCTCACACTCCTGGTCCTGACAGAACAACATGTCTGCATTTTTaGTCACCGCCTTCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: LTAHTPTAKSHTPGPDRTTCLHF*SPPSGR
Trigger: GCGACCGGAAGGCGGTGATCAAAAATGCAGACATGT...TGTTCTGTCAGGACCAGGAGTGTGAGACTTTGCTGTTGGTGTGTGCGCAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CAA 72 bp GTCACTTACCAACTGCTAAGCCTCATCAACCCTATCTaGAACAAACTAGCAGAGACATACATCTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: VTYQLLSLINPI*NKLAETYISNR
Trigger: TCTGTTGGAGATGTATGTCTCTGCTAGTTTGTTCAAGATAGGGTTGATGAGGCTTAGCAGTTGGTAAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CAA 72 bp CTGGATTTCCTAAGACACTTTCACAAAGAAACAGGCTaGCAAGATGGCTTATGGAATAGACTTGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LDFLRHFHKETG*QDGLWNRLAAE
Trigger: CTCAGCAGCAAGTCTATTCCATAAGCCATCTTGCAAGCCTGTTTCTTTGTGAAAGTGTCTTAGGAAATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
3UTR CAA 72 bp AAGAAACAGGCTTGCAAGATGGCTTATGGAATAGACTaGCTGCTGAGTCTTAGAATCTACACAGTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: KKQACKMAYGID*LLSLRIYTVEN
Trigger: ATTCTCTACTGTGTAGATTCTAAGACTCAGCAGCAAGTCTATTCCATAAGCCATCTTGCAAGCCTGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4
CDS-3UTR CAA 90 bp CACATGACTCCAAGTACCCCATTGTTTCTGCAGATAGTAGGAGAGGCATGTCTAGACATGTCTGCATTTTaGATCACCGCCTTCCGGTCG +
Preference number: 5 (lower is better)
Translates to: HMTPSTPLFLQIVGEACLDMSAF*ITAFRS
Trigger: CGACCGGAAGGCGGTGATCAAAAATGCAGACATGTC...TAGACATGCCTCTCCTACTATCTGCAGAAACAATGGGGTACTTGGAGTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009157.4