Pregenerated sensors for DYNC2LI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024253Ensembl transcript IDs: ENSMUST00000025101.10
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | GTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCCACAGCTCCATAGGTaGGTGGGCCTGAAGTTTTCC | + |
Preference number: 4 (lower is better) Translates to: VATEGKKIIFLDWEGSHAPQLHR*VGLKFS Trigger: GGAAAACTTCAGGCCCACTCACCTATGGAGCTGTGG...GGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR GCA 90 bp | CATGTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATTCCGGATGGTCCTTCTaGACCACGCTCCACATTCGT | + |
Preference number: 4 (lower is better) Translates to: HVATEGKKIIFLDWEGSHSGWSF*TTLHIR Trigger: ACGAATGTGGAGCGTGGTGCAGAAGGACCATCCGGA...ATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR TCA 90 bp | GTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCATAGGTGAGTGGGCCTaGAGTTTTCCAATGTCACTG | + |
Preference number: 4 (lower is better) Translates to: VATEGKKIIFLDWEGSHAIGEWA*SFPMSL Trigger: CAGTGACATTGGAAAACTTCAGGCCCACTCACCTAT...GGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR GCA 90 bp | GAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCACAGCAGGCTCTACCTCAGCTTTTaGGATTTCCCAGAGAGTTTC | + |
Preference number: 4 (lower is better) Translates to: EGKKIIFLDWEGSHAHSRLYLSF*DFPESF Trigger: GAAACTCTCTGGGAAATCGCAAAAGCTGAGGTAGAG...CCTGCTGTGGGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR GCA 90 bp | CATGTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATCCTTGGAGCTTGTCTTaGCCAGCTTCATTATCACCT | + |
Preference number: 4 (lower is better) Translates to: HVATEGKKIIFLDWEGSHPWSLS*PASLSP Trigger: AGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGG...ATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR GCA 90 bp | GTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCTGGCTTTTTGTGGCTTaGAACAGATTTTCCATGGTT | + |
Preference number: 4 (lower is better) Translates to: VATEGKKIIFLDWEGSHAWLFVA*NRFSMV Trigger: AACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCA...GGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CCA 90 bp | GCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCACTGCTGTGATAAACAGTaGCTTATTTTGATCCACACA | + |
Preference number: 4 (lower is better) Translates to: ATEGKKIIFLDWEGSHAHCCDKQ*LILIHT Trigger: TGTGTGGATCAAAATAAGCCACTGTTTATCACAGCA...GTGGGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR TCA 90 bp | GTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCAGATTTTCCATGGTTaGCCAAAGATCATTAGGTTT | + |
Preference number: 4 (lower is better) Translates to: VATEGKKIIFLDWEGSHAQIFHG*PKIIRF Trigger: AAACCTAATGATCTTTGGTCAACCATGGAAAATCTG...GGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CCA 90 bp | CATGTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATATCACCTTGTCTACATaGCTTTTTGTGGCTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: HVATEGKKIIFLDWEGSHITLST*LFVACN Trigger: GTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGAT...ATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAACATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CCA 90 bp | CATGTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATCTACATGGCTTTTTGTaGCTTGCAACAGATTTTCCA | + |
Preference number: 4 (lower is better) Translates to: HVATEGKKIIFLDWEGSHLHGFL*LATDFP Trigger: TGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAG...ATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR GCA 90 bp | CATGTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATTTTATCAATACCGAATaGCAACTGGTTGATAACACC | + |
Preference number: 4 (lower is better) Translates to: HVATEGKKIIFLDWEGSHFINTE*QLVDNT Trigger: GGTGTTATCAACCAGTTGGCATTCGGTATTGATAAA...ATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS GCA 90 bp | AATTCCCGGTCCGGATGGTCCTTCTGCACCACGCTCCACATTCGTTaGCGCATCTCGGCCGAAGCCTTGGAGCTTGTCTTGCCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: NSRSGWSFCTTLHIR*RISAEALELVLPSF Trigger: GAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGTGGTGCAGAAGGACCATCCGGACCGGGAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 90 bp | TCATCGACTTCGCTTTCTGCATACTGCGGGTCTCGGGCTGGGTCCTaGACCGCCTTCAGGGTGCCGGTACTCTTTGGTGGGAAGAGCTTG | + |
Preference number: 5 (lower is better) Translates to: SSTSLSAYCGSRAGS*TAFRVPVLFGGKSL Trigger: CAAGCTCTTCCCACCAAAGAGTACCGGCACCCTGAAGGCGGTCCAGGACCCAGCCCGAGACCCGCAGTATGCAGAAAGCGAAGTCGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 90 bp | CCTCATCTCATCGACTTCGCTTTCTGCATACTGCGGGTCTCGGGCTaGGTCCTGGACCGCCTTCAGGGTGCCGGTACTCTTTGGTGGGAA | + |
Preference number: 5 (lower is better) Translates to: PHLIDFAFCILRVSG*VLDRLQGAGTLWWE Trigger: TTCCCACCAAAGAGTACCGGCACCCTGAAGGCGGTCCAGGACCCAGCCCGAGACCCGCAGTATGCAGAAAGCGAAGTCGATGAGATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 90 bp | GTCTCGGGCTGGGTCCTGGACCGCCTTCAGGGTGCCGGTACTCTTTaGTGGGAAGAGCTTGTCATACACCTTTTTCCACAGCTCCATAGG | + |
Preference number: 5 (lower is better) Translates to: VSGWVLDRLQGAGTL*WEELVIHLFPQLHR Trigger: CCTATGGAGCTGTGGAAAAAGGTGTATGACAAGCTCTTCCCACCAAAGAGTACCGGCACCCTGAAGGCGGTCCAGGACCCAGCCCGAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS GCA 90 bp | GGTATTGGAAATGGGTCAATTAATTCCCGGTCCGGATGGTCCTTCTaGACCACGCTCCACATTCGTTGCCGCATCTCGGCCGAAGCCTTG | + |
Preference number: 5 (lower is better) Translates to: GIGNGSINSRSGWSF*TTLHIRCRISAEAL Trigger: CAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGTGGTGCAGAAGGACCATCCGGACCGGGAATTAATTGACCCATTTCCAATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 90 bp | TCTGCACCACGCTCCACATTCGTTGCCGCATCTCGGCCGAAGCCTTaGAGCTTGTCTTGCCCAGCTTCATTATCACCTTGTCTACATGGC | + |
Preference number: 5 (lower is better) Translates to: SAPRSTFVAASRPKP*SLSCPASLSPCLHG Trigger: GCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGTGGTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 90 bp | ATGACCAGAGGTATTGGAAATGGGTCAATTAATTCCCGGTCCGGATaGTCCTTCTGCACCACGCTCCACATTCGTTGCCGCATCTCGGCC | + |
Preference number: 5 (lower is better) Translates to: MTRGIGNGSINSRSG*SFCTTLHIRCRISA Trigger: GGCCGAGATGCGGCAACGAATGTGGAGCGTGGTGCAGAAGGACCATCCGGACCGGGAATTAATTGACCCATTTCCAATACCTCTGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | GAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCACAGCAGGATCTCGGCCGAAGCCTaGGAGCTTGTCTTGCCCAGC | + |
Preference number: 5 (lower is better) Translates to: EGKKIIFLDWEGSHAHSRISAEA*ELVLPS Trigger: GCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGAT...CCTGCTGTGGGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS GCA 90 bp | TCCACATTCGTTGCCGCATCTCGGCCGAAGCCTTGGAGCTTGTCTTaGCCAGCTTCATTATCACCTTGTCTACATGGCTTTTTGTGGCTT | + |
Preference number: 5 (lower is better) Translates to: STFVAASRPKPWSLS*PASLSPCLHGFLWL Trigger: AAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | GCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCACGGGTGCCGGTACTCTTaGGTGGGAAGAGCTTGTCAT | + |
Preference number: 5 (lower is better) Translates to: ATEGKKIIFLDWEGSHAHGCRYS*VGRACH Trigger: ATGACAAGCTCTTCCCACCAAAGAGTACCGGCACCC...GTGGGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS TCA 90 bp | TGGTGGGAAGAGCTTGTCATACACCTTTTTCCACAGCTCCATAGGTaGGTGGGCCTGAAGTTTTCCAATGTCACTGTCAGGAACAGGAGG | + |
Preference number: 5 (lower is better) Translates to: WWEELVIHLFPQLHR*VGLKFSNVTVRNRR Trigger: CCTCCTGTTCCTGACAGTGACATTGGAAAACTTCAGGCCCACTCACCTATGGAGCTGTGGAAAAAGGTGTATGACAAGCTCTTCCCACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | CATGTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGGCGTGTTGTGCCCCTaGGTCTTCCTTCCGTACGTG | + |
Preference number: 5 (lower is better) Translates to: HVATEGKKIIFLDWEGSHGVLCP*VFLPYV Trigger: CACGTACGGAAGGAAGACCAAGGGGCACAACACGCC...ATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS TCA 90 bp | AGCTTGTCATACACCTTTTTCCACAGCTCCATAGGTGAGTGGGCCTaGAGTTTTCCAATGTCACTGTCAGGAACAGGAGGAGACCCTATC | + |
Preference number: 5 (lower is better) Translates to: SLSYTFFHSSIGEWA*SFPMSLSGTGGDPI Trigger: GATAGGGTCTCCTCCTGTTCCTGACAGTGACATTGGAAAACTTCAGGCCCACTCACCTATGGAGCTGTGGAAAAAGGTGTATGACAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | GTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCCGAATGCCAACTGGTaGATAACACCGCGTATCTTC | + |
Preference number: 5 (lower is better) Translates to: VATEGKKIIFLDWEGSHAPNANW*ITPRIF Trigger: GAAGATACGCGGTGTTATCAACCAGTTGGCATTCGG...GGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | GTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCAACAGAGCTTCTGACTaGCTGGTAAACATCAGCGAG | + |
Preference number: 5 (lower is better) Translates to: VATEGKKIIFLDWEGSHANRASD*LVNISE Trigger: CTCGCTGATGTTTACCAGCAAGTCAGAAGCTCTGTT...GGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 90 bp | GCCTTGGAGCTTGTCTTGCCCAGCTTCATTATCACCTTGTCTACATaGCTTTTTGTGGCTTGCAACAGATTTTCCATGGTTGACCAAAGA | + |
Preference number: 5 (lower is better) Translates to: ALELVLPSFIITLST*LFVACNRFSMVDQR Trigger: TCTTTGGTCAACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | GCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCACATGGCTTTTTGTGGCTaGCAACAGATTTTCCATGGT | + |
Preference number: 5 (lower is better) Translates to: ATEGKKIIFLDWEGSHAHMAFCG*QQIFHG Trigger: ACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCAT...GTGGGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | GAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATGCCCACAGCAGGTGTCTACATGGCTTTTaGTGGCTTGCAACAGATTTT | + |
Preference number: 5 (lower is better) Translates to: EGKKIIFLDWEGSHAHSRCLHGF*WLATDF Trigger: AAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACA...CCTGCTGTGGGCATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS GCA 90 bp | TTGCCCAGCTTCATTATCACCTTGTCTACATGGCTTTTTGTGGCTTaGAACAGATTTTCCATGGTTGACCAAAGATCATTAGGTTTGGAA | + |
Preference number: 5 (lower is better) Translates to: LPSFIITLSTWLFVA*NRFSMVDQRSLGLE Trigger: TTCCAAACCTAATGATCTTTGGTCAACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS-3UTR CAA 90 bp | CATGTTGCCACAGAAGGTAAGAAAATAATCTTCCTCGATTGGGAAGGAAGCCATAGCTTCATTATCACCTaGTCTACATGGCTTTTTGTG | + |
Preference number: 5 (lower is better) Translates to: HVATEGKKIIFLDWEGSHSFIIT*STWLFV Trigger: CACAAAAAGCCATGTAGACAAGGTGATAATGAAGCT...ATGGCTTCCTTCCCAATCGAGGAAGATTATTTTCTTACCTTCTGTGGCAACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS GCA 72 bp | TCCGGATGGTCCTTCTGCACCACGCTCCACATTCGTTaGCGCATCTCGGCCGAAGCCTTGGAGCTTGTCTTG | + |
Preference number: 6 (lower is better) Translates to: SGWSFCTTLHIR*RISAEALELVL Trigger: CAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGTGGTGCAGAAGGACCATCCGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS GCA 72 bp | GTCCTTCTGAACCCTCATCTCATCGACTTCGCTTTCTaGATACTGCGGGTCTCGGGCTGGGTCCTGGACCGC | + |
Preference number: 6 (lower is better) Translates to: VLLNPHLIDFAF*ILRVSGWVLDR Trigger: GCGGTCCAGGACCCAGCCCGAGACCCGCAGTATGCAGAAAGCGAAGTCGATGAGATGAGGGTTCAGAAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | GTCCGGATGGTCCTTCTGCACCACGCTCCACATTCGTaGCCGCATCTCGGCCGAAGCCTTGGAGCTTGTCTT | + |
Preference number: 6 (lower is better) Translates to: VRMVLLHHAPHS*PHLGRSLGACL Trigger: AAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGTGGTGCAGAAGGACCATCCGGAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 72 bp | CGCTCCACATTCGTTGCCGCATCTCGGCCGAAGCCTTaGAGCTTGTCTTGCCCAGCTTCATTATCACCTTGT | + |
Preference number: 6 (lower is better) Translates to: RSTFVAASRPKP*SLSCPASLSPC Trigger: ACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 72 bp | GTCCTGGACCGCCTTCAGGGTGCCGGTACTCTTTGGTaGGAAGAGCTTGTCATACACCTTTTTCCACAGCTC | + |
Preference number: 6 (lower is better) Translates to: VLDRLQGAGTLW*EELVIHLFPQL Trigger: GAGCTGTGGAAAAAGGTGTATGACAAGCTCTTCCCACCAAAGAGTACCGGCACCCTGAAGGCGGTCCAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 72 bp | TGGGTCCTGGACCGCCTTCAGGGTGCCGGTACTCTTTaGTGGGAAGAGCTTGTCATACACCTTTTTCCACAG | + |
Preference number: 6 (lower is better) Translates to: WVLDRLQGAGTL*WEELVIHLFPQ Trigger: CTGTGGAAAAAGGTGTATGACAAGCTCTTCCCACCAAAGAGTACCGGCACCCTGAAGGCGGTCCAGGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | ACGCTCCACATTCGTTGCCGCATCTCGGCCGAAGCCTaGGAGCTTGTCTTGCCCAGCTTCATTATCACCTTG | + |
Preference number: 6 (lower is better) Translates to: TLHIRCRISAEA*ELVLPSFIITL Trigger: CAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | CTGGGTCCTGGACCGCCTTCAGGGTGCCGGTACTCTTaGGTGGGAAGAGCTTGTCATACACCTTTTTCCACA | + |
Preference number: 6 (lower is better) Translates to: LGPGPPSGCRYS*VGRACHTPFST Trigger: TGTGGAAAAAGGTGTATGACAAGCTCTTCCCACCAAAGAGTACCGGCACCCTGAAGGCGGTCCAGGACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 90 bp | TTCTGCACCACGCTCCACATTCGTTGCCGCATCTCGGCCGAAGCCTaGGAGCTTGTCTTGCCCAGCTTCATTATCACCTTGTCTACATGG | + |
Preference number: 6 (lower is better) Translates to: FCTTLHIRCRISAEA*ELVLPSFIITLSTW Trigger: CCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGTGGTGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 72 bp | GGTATTGGAAATGGGTCAATTAATTCCCGGTCCGGATaGTCCTTCTGCACCACGCTCCACATTCGTTGCCGC | + |
Preference number: 6 (lower is better) Translates to: GIGNGSINSRSG*SFCTTLHIRCR Trigger: GCGGCAACGAATGTGGAGCGTGGTGCAGAAGGACCATCCGGACCGGGAATTAATTGACCCATTTCCAATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | CGTTGCCGCATCTCGGCCGAAGCCTTGGAGCTTGTCTaGCCCAGCTTCATTATCACCTTGTCTACATGGCTT | + |
Preference number: 6 (lower is better) Translates to: RCRISAEALELV*PSFIITLSTWL Trigger: AAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 90 bp | GCAAGGAGGTTCCTCCACCCAGTTCCCAAAAGTGAGCAATGTCTTTaGGCGTGTTGTGCCCCTTGGTCTTCCTTCCGTACGTGTACTCCA | + |
Preference number: 6 (lower is better) Translates to: ARRFLHPVPKSEQCL*ACCAPWSSFRTCTP Trigger: TGGAGTACACGTACGGAAGGAAGACCAAGGGGCACAACACGCCAAAAGACATTGCTCACTTTTGGGAACTGGGTGGAGGAACCTCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 90 bp | CCACGCTCCACATTCGTTGCCGCATCTCGGCCGAAGCCTTGGAGCTaGTCTTGCCCAGCTTCATTATCACCTTGTCTACATGGCTTTTTG | + |
Preference number: 6 (lower is better) Translates to: PRSTFVAASRPKPWS*SCPASLSPCLHGFL Trigger: CAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAGCGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | TTCCTCCACCCAGTTCCCAAAAGTGAGCAATGTCTTTaGGCGTGTTGTGCCCCTTGGTCTTCCTTCCGTACG | + |
Preference number: 6 (lower is better) Translates to: FLHPVPKSEQCL*ACCAPWSSFRT Trigger: CGTACGGAAGGAAGACCAAGGGGCACAACACGCCAAAAGACATTGCTCACTTTTGGGAACTGGGTGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | GCCTTCAGGGTGCCGGTACTCTTTGGTGGGAAGAGCTaGTCATACACCTTTTTCCACAGCTCCATAGGTGAG | + |
Preference number: 6 (lower is better) Translates to: AFRVPVLFGGKS*SYTFFHSSIGE Trigger: CTCACCTATGGAGCTGTGGAAAAAGGTGTATGACAAGCTCTTCCCACCAAAGAGTACCGGCACCCTGAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 90 bp | CTCCACATTCGTTGCCGCATCTCGGCCGAAGCCTTGGAGCTTGTCTaGCCCAGCTTCATTATCACCTTGTCTACATGGCTTTTTGTGGCT | + |
Preference number: 6 (lower is better) Translates to: LHIRCRISAEALELV*PSFIITLSTWLFVA Trigger: AGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | ACATTCGTTGCCGCATCTCGGCCGAAGCCTTGGAGCTaGTCTTGCCCAGCTTCATTATCACCTTGTCTACAT | + |
Preference number: 6 (lower is better) Translates to: TFVAASRPKPWS*SCPASLSPCLH Trigger: ATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGAGATGCGGCAACGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 90 bp | TCGGCCGAAGCCTTGGAGCTTGTCTTGCCCAGCTTCATTATCACCTaGTCTACATGGCTTTTTGTGGCTTGCAACAGATTTTCCATGGTT | + |
Preference number: 6 (lower is better) Translates to: SAEALELVLPSFIIT*STWLFVACNRFSMV Trigger: AACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGCTTCGGCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | GCCTTGGAGCTTGTCTTGCCCAGCTTCATTATCACCTaGTCTACATGGCTTTTTGTGGCTTGCAACAGATTT | + |
Preference number: 6 (lower is better) Translates to: ALELVLPSFIIT*STWLFVACNRF Trigger: AAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAGCTCCAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 72 bp | CTTGTCTTGCCCAGCTTCATTATCACCTTGTCTACATaGCTTTTTGTGGCTTGCAACAGATTTTCCATGGTT | + |
Preference number: 6 (lower is better) Translates to: LVLPSFIITLST*LFVACNRFSMV Trigger: AACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCAAGACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 72 bp | TGCCCAGCTTCATTATCACCTTGTCTACATGGCTTTTaGTGGCTTGCAACAGATTTTCCATGGTTGACCAAA | + |
Preference number: 6 (lower is better) Translates to: CPASLSPCLHGF*WLATDFPWLTK Trigger: TTTGGTCAACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CCA 72 bp | CCAGCTTCATTATCACCTTGTCTACATGGCTTTTTGTaGCTTGCAACAGATTTTCCATGGTTGACCAAAGAT | + |
Preference number: 6 (lower is better) Translates to: PASLSPCLHGFL*LATDFPWLTKD Trigger: ATCTTTGGTCAACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAAGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS CAA 90 bp | TCCACACATATTGATTTGCTTTTATCAATACCGAATGCCAACTGGTaGATAACACCGCGTATCTTCAGTAACAGAGCTTCTGACTTGCTG | + |
Preference number: 6 (lower is better) Translates to: STHIDLLLSIPNANW*ITPRIFSNRASDLL Trigger: CAGCAAGTCAGAAGCTCTGTTACTGAAGATACGCGGTGTTATCAACCAGTTGGCATTCGGTATTGATAAAAGCAAATCAATATGTGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS TCA 72 bp | GAATCCAGTCCTGCTGTGATAAACAGTGGCTTATTTTaGTCCACACATATTGATTTGCTTTTATCAATACCG | + |
Preference number: 6 (lower is better) Translates to: ESSPAVINSGLF*STHIDLLLSIP Trigger: CGGTATTGATAAAAGCAAATCAATATGTGTGGATCAAAATAAGCCACTGTTTATCACAGCAGGACTGGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |
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CDS GCA 72 bp | TTCATTATCACCTTGTCTACATGGCTTTTTGTGGCTTaGAACAGATTTTCCATGGTTGACCAAAGATCATTA | + |
Preference number: 6 (lower is better) Translates to: FIITLSTWLFVA*NRFSMVDQRSL Trigger: TAATGATCTTTGGTCAACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTAGACAAGGTGATAATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025101.10 |