Pregenerated sensors for DYNC2I2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039715Ensembl transcript IDs: ENSMUST00000113711.3
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGGGCAAAGCCCTTGGTaGGCCGCAGCTGACCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEGQSPW*AAADRP Trigger: GGGCCGGTCAGCTGCGGCTCACCAAGGGCTTTGCCC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCCCAGGGTCTCATCCTaGAGAGGCGCAGGCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEPRVSS*RGAGRP Trigger: AGGGCGGCCTGCGCCTCTTCAGGATGAGACCCTGGG...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGTGGACGCTCCTCCACTaGGAGGGCACGGACGCCACG | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEWTLLH*EGTDAT Trigger: CGTGGCGTCCGTGCCCTCGCAGTGGAGGAGCGTCCA...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGTCCCCGCGGATCCCCTaGACGCTCCTCCACTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEESPRIP*TLLHCE Trigger: CTCGCAGTGGAGGAGCGTCCAGGGGATCCGCGGGGA...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGGAGAGAAGGTGAACTaGACCGGGGCCCTCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEGEKVN*TGALSG Trigger: GCCGCTGAGGGCCCCGGTGCAGTTCACCTTCTCTCC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCATGGGGAGAGAAGGTaGACTGCACCGGGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEHGERR*TAPGPS Trigger: TGAGGGCCCCGGTGCAGTTCACCTTCTCTCCCCATG...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGTGCTCCGAGGCAGCTaGTGCACAGCCAGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEVLRGS*CTARAK Trigger: CTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAGCAC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGCTGGAGAAGGCCACTaGTGTCACCCCCACCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEAGEGH*CHPHLS Trigger: ACTGAGGTGGGGGTGACATCAGTGGCCTTCTCCAGC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGTGAGAGAGCTGCAGTaGGGTAAGGGGCTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEVRELQ*GKGLSL Trigger: CAGGCTCAGCCCCTTACCTCACTGCAGCTCTCTCAC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGCTGAGCCTGCAGCATaGAGTACAGGTGGACGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEAEPAA*STGGRG Trigger: GCCACGTCCACCTGTACTCCATGCTGCAGGCTCAGC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGAAATGCCGGTCACATaGAGACCCTGCCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEEMPVT*RPCPWA Trigger: AGCCCAAGGGCAGGGTCTGCATGTGACCGGCATTTC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGCTTCTTCAGCTTGGTaGTCCGAGGCAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEASSAW*SEAAAA Trigger: TGCAGCAGCTGCCTCGGAGCACCAAGCTGAAGAAGC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGACTACTGATGGCTGCTaGGGATTCAGGCCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEETTDGC*GFRPWR Trigger: CCGCCAAGGCCTGAATCCCCAGCAGCCATCAGTAGT...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGACACCGTCTGCTGCTaGTCAGTCCAGTTCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEDTVCC*SVQFTS Trigger: TGAGGTGAACTGGACTGAGCAGCAGCAGACGGTGTC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGACCACTACTGATGGCTaGTGGGGATTCAGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEETTTDG*WGFRPW Trigger: CCAAGGCCTGAATCCCCAGCAGCCATCAGTAGTGGT...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGGAAGCCACCTTCTGTaGCCAGAACGAAAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEGSHLL*PERKGW Trigger: CCAGCCTTTTCGTTCTGGGCACAGAAGGTGGCTTCC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGAAGGCTGTGCTCAGCTaGCACACTTTGACCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEKAVLS*HTLTMP Trigger: GGGCATGGTCAAAGTGTGGCAGCTGAGCACAGCCTT...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGACACCTTGCCATCTGTaGCCGCACTCAGTACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEETPCHL*PHSVPG Trigger: TCCAGGTACTGAGTGCGGCCACAGATGGCAAGGTGT...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGGAAAGGCTTCCAGCCTaGGGGTGTCATACTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEERLPA*GCHTGK Trigger: TTTCCCAGTATGACACCCTCAGGCTGGAAGCCTTTC...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGAGGAAGAGATTCCTGTaGAAGGGGGAACAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEERKRFL*KGEQLT Trigger: TGTGAGCTGTTCCCCCTTTCACAGGAATCTCTTCCT...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCCAGAACGAAAAGGCTaGAGTCAAAGCTGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEPERKG*SQSWRR Trigger: CCTTCTCCAGCTTTGACTCCAGCCTTTTCGTTCTGG...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGTACACACGTAGGACTTaGGTGTACTCCAGTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEYTRRT*VYSSLH Trigger: ATGGAGACTGGAGTACACTCAAGTCCTACGTGTGTA...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATTTGGTGAGCCGCAGCTaGCCGGCCCCACTGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHLVSRS*PAPLPL Trigger: GAGAGGCAGTGGGGCCGGTCAGCTGCGGCTCACCAA...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATCTCCGAGGCAGCTGCTaGACAGCCAGGGCAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHLRGSC*TARAKP Trigger: GGGCTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAG...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGGGGCCCTTGTTCTGTaGAGGCTGTGCTCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHGALVL*RLCSAA Trigger: GGCAGCTGAGCACAGCCTTCACAGAACAAGGGCCCC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGCTGACCGGCCCCACTaGCTCTCCAGAGCAACACCT | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHADRPH*LSRATP Trigger: AGGTGTTGCTCTGGAGAGGCAGTGGGGCCGGTCAGC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGCCGCACTCAGTACCTaGAAGCGGTGGCTATGCCGG | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHAALST*KRWLCR Trigger: CCGGCATAGCCACCGCTTCCAGGTACTGAGTGCGGC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGAGTACAGGTGGACGTaGCCATCGGTCCCAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHEYRWT*PSVPAL Trigger: GAGCGCTGGGACCGATGGCCACGTCCACCTGTACTC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATAGCTGGGCATCCGAGTaGGAGCAGCTACCTCTGACG | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHSWASE*EQLPLT Trigger: CGTCAGAGGTAGCTGCTCTCACTCGGATGCCCAGCT...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGAGGGCTGTGTGGGATaGAAGGCCAGGCACATGACA | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHEGCVG*KARHMT Trigger: TGTCATGTGCCTGGCCTTTCATCCCACACAGCCCTC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATAGTGAGGTAAGGGGCTaGGCCTGCAGCATGGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHSEVRG*ACSMEY Trigger: GTACTCCATGCTGCAGGCTCAGCCCCTTACCTCACT...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATCAGGACACCGTCTGCTaGTGCTCAGTCCAGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHQDTVC*CSVQFT Trigger: GGTGAACTGGACTGAGCAGCAGCAGACGGTGTCCTG...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGCCTCTGTCTGTACCTaGGCATCTGCATGTGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHASVCT*ASACVR Trigger: CCGGACACATGCAGATGCCCAGGTACAGACAGAGGC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATTGTGGGAGGGCTGTGTaGGATGAAAGGCCAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHCGRAV*DERPGT Trigger: TGTGCCTGGCCTTTCATCCCACACAGCCCTCCCACA...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGTTCTGTGAGCTTTTCTaGAGGTCAAAAAGTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEEFCELF*RSKSCT Trigger: TGTACAACTTTTTGACCTCCAGAAAAGCTCACAGAA...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGACAGGACTTCCATCTTaGGTTTGTGTTATAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: GCEPPCGCWDLNSGPSEETGLPS*VCVIET Trigger: AGTTTCTATAACACAAACCCAAGATGGAAGTCCTGT...CTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR GCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATACTCGGCTGTGGCAATaGCCGCTGTCTGGCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHTRLWQ*PLSGNF Trigger: AAAGTTGCCAGACAGCGGGCATTGCCACAGCCGAGT...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATTGGGGATTCAGGCCTTaGCGGTCCAGGTTCCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHWGFRP*RSRFQV Trigger: TACTTGGAACCTGGACCGCCAAGGCCTGAATCCCCA...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATAGTCTCTCCACGGGGTaGCTTCTTCAGCTTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHSLSTG*LLQLGA Trigger: AGCACCAAGCTGAAGAAGCCACCCCGTGGAGAGACT...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGGCTGGAGTCAAAGCTaGAGAAGGCCACTGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHGWSQS*RRPLMS Trigger: TGACATCAGTGGCCTTCTCCAGCTTTGACTCCAGCC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATATTTCTGCTTCTAGCTaGTCCAAGTCCTCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: FIICKYTVAVFKHTRRGHISASS*SKSSTS Trigger: GGAGGTGGAGGACTTGGATCAGCTAGAAGCAGAAAT...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 90 bp | CTCCTCCACTGCGAGGGCACGGACGCCACGCCCAGGGTCTCATCCTaGAGAGGCGCAGGCCGCCCTCGCCGTTCGGCGCCGCCAGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: LLHCEGTDATPRVSS*RGAGRPRRSAPPAP Trigger: CGGGGCTGGCGGCGCCGAACGGCGAGGGCGGCCTGCGCCTCTTCAGGATGAGACCCTGGGCGTGGCGTCCGTGCCCTCGCAGTGGAGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 90 bp | TGGTGCTCCGAGGCAGCTGCTGCACAGCCAGGGCAAAGCCCTTGGTaGGCCGCAGCTGACCGGCCCCACTGCCTCTCCAGAGCAACACCT | + |
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Preference number: 5 (lower is better) Translates to: WCSEAAAAQPGQSPW*AAADRPHCLSRATP Trigger: AGGTGTTGCTCTGGAGAGGCAGTGGGGCCGGTCAGCTGCGGCTCACCAAGGGCTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAGCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 90 bp | GGCAGCTGCTGCACAGCCAGGGCAAAGCCCTTGGTGAGCCGCAGCTaGCCGGCCCCACTGCCTCTCCAGAGCAACACCTTGCCATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GSCCTARAKPLVSRS*PAPLPLQSNTLPSV Trigger: CACAGATGGCAAGGTGTTGCTCTGGAGAGGCAGTGGGGCCGGTCAGCTGCGGCTCACCAAGGGCTTTGCCCTGGCTGTGCAGCAGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 90 bp | CATGGCCGCTGGCTCTTCGGGAGCCTCTGTCTGTACCTGGGCATCTaGATGTGTCCGGGCCTGGGCAGACGACTCGGCTGTGGCAATGCC | + |
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Preference number: 5 (lower is better) Translates to: HGRWLFGSLCLYLGI*MCPGLGRRLGCGNA Trigger: GGCATTGCCACAGCCGAGTCGTCTGCCCAGGCCCGGACACATGCAGATGCCCAGGTACAGACAGAGGCTCCCGAAGAGCCAGCGGCCATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | CCTGGGCATCTGCATGTGTCCGGGCCTGGGCAGACGACTCGGCTGTaGCAATGCCCGCTGTCTGGCAACTTTTCGTCTCCCCGCGGATCC | + |
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Preference number: 5 (lower is better) Translates to: PGHLHVSGPGQTTRL*QCPLSGNFSSPRGS Trigger: GGATCCGCGGGGAGACGAAAAGTTGCCAGACAGCGGGCATTGCCACAGCCGAGTCGTCTGCCCAGGCCCGGACACATGCAGATGCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | ACAGGAGCCATGGCCGCTGGCTCTTCGGGAGCCTCTGTCTGTACCTaGGCATCTGCATGTGTCCGGGCCTGGGCAGACGACTCGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TGAMAAGSSGASVCT*ASACVRAWADDSAV Trigger: CACAGCCGAGTCGTCTGCCCAGGCCCGGACACATGCAGATGCCCAGGTACAGACAGAGGCTCCCGAAGAGCCAGCGGCCATGGCTCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | GCTGACCGGCCCCACTGCCTCTCCAGAGCAACACCTTGCCATCTGTaGCCGCACTCAGTACCTGGAAGCGGTGGCTATGCCGGGGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ADRPHCLSRATPCHL*PHSVPGSGGYAGVQ Trigger: CTGAACCCCGGCATAGCCACCGCTTCCAGGTACTGAGTGCGGCCACAGATGGCAAGGTGTTGCTCTGGAGAGGCAGTGGGGCCGGTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 90 bp | CCTCAGCGGCACAGAGCTGGGCATCCGAGTGAGAGCAGCTACCTCTaGCGCCAGGGAACACTTGAGGGGGAAGCCACCTTCTGTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PQRHRAGHPSESSYL*RQGTLEGEATFCAQ Trigger: CTGGGCACAGAAGGTGGCTTCCCCCTCAAGTGTTCCCTGGCGTCAGAGGTAGCTGCTCTCACTCGGATGCCCAGCTCTGTGCCGCTGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | GCCTCCACCCTCCGGAGAAAGGCTTCCAGCCTGAGGGTGTCATACTaGGAAACAGGAGCCATGGCCGCTGGCTCTTCGGGAGCCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: ASTLRRKASSLRVSY*ETGAMAAGSSGASV Trigger: GACAGAGGCTCCCGAAGAGCCAGCGGCCATGGCTCCTGTTTCCCAGTATGACACCCTCAGGCTGGAAGCCTTTCTCCGGAGGGTGGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | ATGTCACCCCCACCTCAGTCTCTCCACGGGGTGGCTTCTTCAGCTTaGTGCTCCGAGGCAGCTGCTGCACAGCCAGGGCAAAGCCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: MSPPPQSLHGVASSA*CSEAAAAQPGQSPW Trigger: CCAAGGGCTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAGCACCAAGCTGAAGAAGCCACCCCGTGGAGAGACTGAGGTGGGGGTGACAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 90 bp | GACCATAGGCACAGGCCAGCACAGAGCCTGTCGAGTTCCAGGAAATaGCGGTCACATGCAGACCCTGCCCTTGGGCTAGGGGGTAGACCA | + |
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Preference number: 5 (lower is better) Translates to: DHRHRPAQSLSSSRK*RSHADPALGLGGRP Trigger: TGGTCTACCCCCTAGCCCAAGGGCAGGGTCTGCATGTGACCGGCATTTCCTGGAACTCGACAGGCTCTGTGCTGGCCTGTGCCTATGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 90 bp | GCCAGGCACATGACAGCACTCGGCACCTCCACCACTACTGATGGCTaGTGGGGATTCAGGCCTTGGCGGTCCAGGTTCCAAGTACACACG | + |
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Preference number: 5 (lower is better) Translates to: ARHMTALGTSTTTDG*WGFRPWRSRFQVHT Trigger: CGTGTGTACTTGGAACCTGGACCGCCAAGGCCTGAATCCCCAGCAGCCATCAGTAGTGGTGGAGGTGCCGAGTGCTGTCATGTGCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 90 bp | TCCTCCACCTCCCGGGGCCCTTGTTCTGTGAAGGCTGTGCTCAGCTaGCACACTTTGACCATGCCCTTAGCATCACCAGCGGCTAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SSTSRGPCSVKAVLS*HTLTMPLASPAAKS Trigger: GCTCTTAGCCGCTGGTGATGCTAAGGGCATGGTCAAAGTGTGGCAGCTGAGCACAGCCTTCACAGAACAAGGGCCCCGGGAGGTGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 90 bp | ATGAAAGGCCAGGCACATGACAGCACTCGGCACCTCCACCACTACTaGTGGCTGCTGGGGATTCAGGCCTTGGCGGTCCAGGTTCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: MKGQAHDSTRHLHHY*WLLGIQALAVQVPS Trigger: ACTTGGAACCTGGACCGCCAAGGCCTGAATCCCCAGCAGCCATCAGTAGTGGTGGAGGTGCCGAGTGCTGTCATGTGCCTGGCCTTTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | TTCCAGCCTGAGGGTGTCATACTGGGAAACAGGAGCCATGGCCGCTaGCTCTTCGGGAGCCTCTGTCTGTACCTGGGCATCTGCATGTGT | + |
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Preference number: 5 (lower is better) Translates to: FQPEGVILGNRSHGR*LFGSLCLYLGICMC Trigger: ACACATGCAGATGCCCAGGTACAGACAGAGGCTCCCGAAGAGCCAGCGGCCATGGCTCCTGTTTCCCAGTATGACACCCTCAGGCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | TGGGTCTGTGTGAGTGTCATCTGTCAGACCTGTACGCCAAAGCAGTaGGTCCTCAGGTCGGCTCATGTCCCACACCAGCACTTCCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: WVCVSVICQTCTPKQ*VLRSAHVPHQHFPA Trigger: AGCGGGGAAGTGCTGGTGTGGGACATGAGCCGACCTGAGGACCCACTGCTTTGGCGTACAGGTCTGACAGATGACACTCACACAGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 90 bp | GGAAGCCACCTTCTGTGCCCAGAACGAAAAGGCTGGAGTCAAAGCTaGAGAAGGCCACTGATGTCACCCCCACCTCAGTCTCTCCACGGG | + |
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Preference number: 5 (lower is better) Translates to: GSHLLCPERKGWSQS*RRPLMSPPPQSLHG Trigger: CCCGTGGAGAGACTGAGGTGGGGGTGACATCAGTGGCCTTCTCCAGCTTTGACTCCAGCCTTTTCGTTCTGGGCACAGAAGGTGGCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 90 bp | GATTCAGGCCTTGGCGGTCCAGGTTCCAAGTACACACGTAGGACTTaGGTGTACTCCAGTCTCCATCATCTAGCCGACCATAGGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: DSGLGGPGSKYTRRT*VYSSLHHLADHRHR Trigger: CCTGTGCCTATGGTCGGCTAGATGATGGAGACTGGAGTACACTCAAGTCCTACGTGTGTACTTGGAACCTGGACCGCCAAGGCCTGAATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATCACCTCCCGGGGCCCTaGTTCTGTGAAGGCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: FIICKYTVAVFKHTRRGHHLPGP*FCEGCA Trigger: AGCACAGCCTTCACAGAACAAGGGCCCCGGGAGGTG...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATGACGCCAGGGAACACTaGAGGGGGAAGCCACCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FIICKYTVAVFKHTRRGHDAREH*RGKPPS Trigger: AGAAGGTGGCTTCCCCCTCAAGTGTTCCCTGGCGTC...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAAACACACCAGAAGAGGGCATACTTCCATCTTGGGTTaGTGTTATAGAAACTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: FIICKYTVAVFKHTRRGHTSILG*CYRNCG Trigger: CCCACAGTTTCTATAACACAAACCCAAGATGGAAGT...ATGCCCTCTTCTGGTGTGTTTGAAGACAGCTACAGTGTACTTACATATAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 72 bp | TTCGTCTCCCCGCGGATCCCCTGGACGCTCCTCCACTaGGAGGGCACGGACGCCACGCCCAGGGTCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: FVSPRIPWTLLH*EGTDATPRVSS Trigger: GGATGAGACCCTGGGCGTGGCGTCCGTGCCCTCGCAGTGGAGGAGCGTCCAGGGGATCCGCGGGGAGACGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 72 bp | GTGTCCGGGCCTGGGCAGACGACTCGGCTGTGGCAATaGCCGCTGTCTGGCAACTTTTCGTCTCCCCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: VSGPGQTTRLWQ*PLSGNFSSPRG Trigger: TCCGCGGGGAGACGAAAAGTTGCCAGACAGCGGGCATTGCCACAGCCGAGTCGTCTGCCCAGGCCCGGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 72 bp | CGGGGTGGCTTCTTCAGCTTGGTGCTCCGAGGCAGCTaGTGCACAGCCAGGGCAAAGCCCTTGGTGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RGGFFSLVLRGS*CTARAKPLVSR Trigger: GCGGCTCACCAAGGGCTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAGCACCAAGCTGAAGAAGCCACCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 72 bp | TGCACAGCCAGGGCAAAGCCCTTGGTGAGCCGCAGCTaGCCGGCCCCACTGCCTCTCCAGAGCAACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: CTARAKPLVSRS*PAPLPLQSNTL Trigger: CAAGGTGTTGCTCTGGAGAGGCAGTGGGGCCGGTCAGCTGCGGCTCACCAAGGGCTTTGCCCTGGCTGTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 72 bp | GGTGGCTTCTTCAGCTTGGTGCTCCGAGGCAGCTGCTaGACAGCCAGGGCAAAGCCCTTGGTGAGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GGFFSLVLRGSC*TARAKPLVSRS Trigger: GCTGCGGCTCACCAAGGGCTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAGCACCAAGCTGAAGAAGCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 72 bp | TGGCTCTTCGGGAGCCTCTGTCTGTACCTGGGCATCTaGATGTGTCCGGGCCTGGGCAGACGACTCGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: WLFGSLCLYLGI*MCPGLGRRLGC Trigger: ACAGCCGAGTCGTCTGCCCAGGCCCGGACACATGCAGATGCCCAGGTACAGACAGAGGCTCCCGAAGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 72 bp | CCTCAGTCTCTCCACGGGGTGGCTTCTTCAGCTTGGTaGTCCGAGGCAGCTGCTGCACAGCCAGGGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: PQSLHGVASSAW*SEAAAAQPGQS Trigger: GCTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAGCACCAAGCTGAAGAAGCCACCCCGTGGAGAGACTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 72 bp | CTGCATGTGTCCGGGCCTGGGCAGACGACTCGGCTGTaGCAATGCCCGCTGTCTGGCAACTTTTCGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LHVSGPGQTTRL*QCPLSGNFSSP Trigger: GGGAGACGAAAAGTTGCCAGACAGCGGGCATTGCCACAGCCGAGTCGTCTGCCCAGGCCCGGACACATGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 72 bp | TCTGTCTGTACCTGGGCATCTGCATGTGTCCGGGCCTaGGCAGACGACTCGGCTGTGGCAATGCCCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SVCTWASACVRA*ADDSAVAMPAV Trigger: GACAGCGGGCATTGCCACAGCCGAGTCGTCTGCCCAGGCCCGGACACATGCAGATGCCCAGGTACAGACAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CAA 90 bp | GATGTCACCCCCACCTCAGTCTCTCCACGGGGTGGCTTCTTCAGCTaGGTGCTCCGAGGCAGCTGCTGCACAGCCAGGGCAAAGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: DVTPTSVSPRGGFFS*VLRGSCCTARAKPL Trigger: CAAGGGCTTTGCCCTGGCTGTGCAGCAGCTGCCTCGGAGCACCAAGCTGAAGAAGCCACCCCGTGGAGAGACTGAGGTGGGGGTGACATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 72 bp | CCATGGCCTCCACCCTCCGGAGAAAGGCTTCCAGCCTaGGGGTGTCATACTGGGAAACAGGAGCCATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PWPPPSGERLPA*GCHTGKQEPWP Trigger: CGGCCATGGCTCCTGTTTCCCAGTATGACACCCTCAGGCTGGAAGCCTTTCTCCGGAGGGTGGAGGCCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 72 bp | CAGGCACATGACAGCACTCGGCACCTCCACCACTACTaGTGGCTGCTGGGGATTCAGGCCTTGGCGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QAHDSTRHLHHY*WLLGIQALAVQ Trigger: CTGGACCGCCAAGGCCTGAATCCCCAGCAGCCATCAGTAGTGGTGGAGGTGCCGAGTGCTGTCATGTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS GCA 72 bp | CACAGGCCAGCACAGAGCCTGTCGAGTTCCAGGAAATaGCGGTCACATGCAGACCCTGCCCTTGGGCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: HRPAQSLSSSRK*RSHADPALGLG Trigger: CCCTAGCCCAAGGGCAGGGTCTGCATGTGACCGGCATTTCCTGGAACTCGACAGGCTCTGTGCTGGCCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 72 bp | CACAGAGCTGGGCATCCGAGTGAGAGCAGCTACCTCTaGCGCCAGGGAACACTTGAGGGGGAAGCCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: HRAGHPSESSYL*RQGTLEGEATF Trigger: GAAGGTGGCTTCCCCCTCAAGTGTTCCCTGGCGTCAGAGGTAGCTGCTCTCACTCGGATGCCCAGCTCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 72 bp | CTCCGGAGAAAGGCTTCCAGCCTGAGGGTGTCATACTaGGAAACAGGAGCCATGGCCGCTGGCTCTTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: LRRKASSLRVSY*ETGAMAAGSSG Trigger: TCCCGAAGAGCCAGCGGCCATGGCTCCTGTTTCCCAGTATGACACCCTCAGGCTGGAAGCCTTTCTCCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CAA 90 bp | CTGGGCATCCGAGTGAGAGCAGCTACCTCTGACGCCAGGGAACACTaGAGGGGGAAGCCACCTTCTGTGCCCAGAACGAAAAGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGIRVRAATSDAREH*RGKPPSVPRTKRLE Trigger: CTCCAGCCTTTTCGTTCTGGGCACAGAAGGTGGCTTCCCCCTCAAGTGTTCCCTGGCGTCAGAGGTAGCTGCTCTCACTCGGATGCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 72 bp | AGCAACACCTTGCCATCTGTGGCCGCACTCAGTACCTaGAAGCGGTGGCTATGCCGGGGTTCAGGTAACCAC | + |
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Preference number: 6 (lower is better) Translates to: SNTLPSVAALST*KRWLCRGSGNH Trigger: GTGGTTACCTGAACCCCGGCATAGCCACCGCTTCCAGGTACTGAGTGCGGCCACAGATGGCAAGGTGTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CCA 72 bp | GTGAGTGTCATCTGTCAGACCTGTACGCCAAAGCAGTaGGTCCTCAGGTCGGCTCATGTCCCACACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VSVICQTCTPKQ*VLRSAHVPHQH Trigger: GTGCTGGTGTGGGACATGAGCCGACCTGAGGACCCACTGCTTTGGCGTACAGGTCTGACAGATGACACTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS CAA 72 bp | CGAGTGAGAGCAGCTACCTCTGACGCCAGGGAACACTaGAGGGGGAAGCCACCTTCTGTGCCCAGAACGAAA | + |
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Preference number: 6 (lower is better) Translates to: RVRAATSDAREH*RGKPPSVPRTK Trigger: TTTCGTTCTGGGCACAGAAGGTGGCTTCCCCCTCAAGTGTTCCCTGGCGTCAGAGGTAGCTGCTCTCACTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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| CDS TCA 72 bp | CTTGGCGGTCCAGGTTCCAAGTACACACGTAGGACTTaGGTGTACTCCAGTCTCCATCATCTAGCCGACCAT | + |
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Preference number: 6 (lower is better) Translates to: LGGPGSKYTRRT*VYSSLHHLADH Trigger: ATGGTCGGCTAGATGATGGAGACTGGAGTACACTCAAGTCCTACGTGTGTACTTGGAACCTGGACCGCCAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113711.3 |
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