Pregenerated sensors for DYNC2I1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042050Ensembl transcript IDs: ENSMUST00000039349.8, ENSMUST00000222679.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCAGCTGTCTTCTCCTTGTGCCGGGCCTCTCGGTCTGGGTCCCTaGTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACTCTGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: SQLSSPCAGPLGLGP*SCVLCIQERPTLSP Trigger: AGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAGCTGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR CCA 90 bp | TTTCCTTGTGCCTCTCCCGGTCTCTCTCCCCACGAGGATGTTCTGTaGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTTGTGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: FPCASPGLSPHEDVL*RCTGLSQLSSPCAG Trigger: CCCGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCACAGAACATCCTCGTGGGGAGAGAGACCGGGAGAGGCACAAGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR GCA 90 bp | TGTTCTGTGGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTTGTaGCGGGCCTCTCGGTCTGGGTCCCTGCTCTTGTGTTCTCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: CSVEVYRSLSAVFSL*RASRSGSLLLCSLY Trigger: ATACAGAGAACACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCACAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 90 bp | ATTCAGGAGCGGCCGACTCTGAGTCCTTGTGCGCCTTCTTTTCTCTaGGTTTCTTCTCCTCCTTGGGACTGCCTGACTGCACCTTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: IQERPTLSPCAPSFL*VSSPPWDCLTAPSG Trigger: ACCTGAAGGTGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTCGGCCGCTCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 90 bp | TGGGTCCCTGCTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACTCTaGGTCCTTGTGCGCCTTCTTTTCTCTGAGTTTCTTCTCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: WVPALVFSVFRSGRL*VLVRLLFSEFLLLL Trigger: AAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACACAAGAGCAGGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 90 bp | CACGCATATCTCGACTCAAGAGGTCATGGTAGGCCATGGACTGCCTaGTCTCTTCTTTCCTGGCCCGTCTGTCTTTCTCTCTCTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: HAYLDSRGHGRPWTA*SLLSWPVCLSLSLC Trigger: ACAGAGAGAGAGAGAAAGACAGACGGGCCAGGAAAGAAGAGATCAGGCAGTCCATGGCCTACCATGACCTCTTGAGTCGAGATATGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR GCA 90 bp | CTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACTCTGAGTCCTTGTaGGCCTTCTTTTCTCTGAGTTTCTTCTCCTCCTTGGGACTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LLCSLYSGAADSESL*AFFSLSFFSSLGLP Trigger: AGGCAGTCCCAAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACACAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 90 bp | CTGGCCCGTCTGTCTTTCTCTCTCTCTCTGTCCTTGCCTCGACTATaGGCCTTCTCTGCTTCTTGGTCTCGATGTCTCTCTTTTAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LARLSFSLSLSLPRL*AFSASWSRCLSFSL Trigger: CAAGCTAAAAGAGAGACATCGAGACCAAGAAGCAGAGAAGGCTCATAGTCGAGGCAAGGACAGAGAGAGAGAGAAAGACAGACGGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 90 bp | CTACATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTaGCTCAATTCTATGAGTGTCATTGAAAGCATACCAAAAGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: LHEDGFHTKSHSECV*LNSMSVIESIPKAV Trigger: AACAGCTTTTGGTATGCTTTCAATGACACTCATAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| 3UTR CAA 90 bp | GGATGTTCTGTGGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTaGTGCCGGGCCTCTCGGTCTGGGTCCCTGCTCTTGTGTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GCSVEVYRSLSAVFS*CRASRSGSLLLCSL Trigger: CAGAGAACACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCACAGAACATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACTCTGAGTCCTTGTGCGCTCCTTGGGACTGCCTaGCTGCACCTTCAGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PCSCVLCIQERPTLSPCALLGTA*LHLQVL Trigger: AAGCACCTGAAGGTGCAGTCAGGCAGTCCCAAGGAG...CGCACAAGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACACAAGAGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTTCTCCTTGTGCCGGGCCTCTCGGTCTGGGTCCCTGCTCTTGTGTTCTCGACTGCACCTTCAGGTaGTTTCTGAGGTCATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LSSPCAGPLGLGPCSCVLDCTFR*FLRSSA Trigger: AGCAGATGACCTCAGAAAGCACCTGAAGGTGCAGTC...GAGAACACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTTGTGCCGGGCCTCTCGGTCTGGGTCCCTGCTCTTGTGTTCTCTGTATCCTTCAGGTGCTTTCTaGGGTCATCTGCTTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: FSLCRASRSGSLLLCSLYPSGAF*GHLLSK Trigger: CTTGGAAAGCAGATGACCTCAGAAAGCACCTGAAGG...ATACAGAGAACACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGTTCTGTGGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTTGTGCCGGGCGCCTTCTTTTCTCTaGGTTTCTTCTCCTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GCSVEVYRSLSAVFSLCRAPSFL*VSSPPW Trigger: CCAAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGC...CCGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCACAGAACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATGTTCTGTGGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTTGTGCCGGTTTCTTCTCCTCCTTaGGACTGCCTGACTGCACCT | + |
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Preference number: 2 (lower is better) Translates to: RMFCGGVQVSLSCLLLVPVSSPP*DCLTAP Trigger: AGGTGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAAC...CGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCACAGAACATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR CAA 90 bp | CTGCTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACTCTGAGTCCTaGTGCGCCTTCTTTTCTCTGAGTTTCTTCTCCTCCTTGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: LLLCSLYSGAADSES*CAFFSLSFFSSLGL Trigger: CAGTCCCAAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACACAAGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTCTCTCTCTCTCTGTCCTTGCCTCGACTATGAGCCTTCTCTGCTTCTTGTCTCCTCCTTGGGACTaGCTGACTGCACCTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VFLSLSVLASTMSLLCFLSPPWD*LTAPSG Trigger: ACCTGAAGGTGCAGTCAGGCAGTCCCAAGGAGGAGA...CAAGAAGCAGAGAAGGCTCATAGTCGAGGCAAGGACAGAGAGAGAGAGAAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR CAA 90 bp | TCTGAGTCCTTGTGCGCCTTCTTTTCTCTGAGTTTCTTCTCCTCCTaGGGACTGCCTGACTGCACCTTCAGGTGCTTTCTGAGGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: SESLCAFFSLSFFSS*GLPDCTFRCFLRSS Trigger: AGATGACCTCAGAAAGCACCTGAAGGTGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATGTTCTGTGGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTTGTGCCGGACTCTGAGTCCTTGTaGGCCTTCTTTTCTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RMFCGGVQVSLSCLLLVPDSESL*AFFSLS Trigger: ACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTC...CGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCACAGAACATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAGTTCCAAAAATAACTaGAAACACTCTTGGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VQENRKNRRLMEATSKVSSSKNN*KHSWKS Trigger: GCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACT...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAAATAGTCCATTAAAGTaGTTTTTCATGGTGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: MKMVFTLSHTVNVSDSILNSPLK*FFMVDC Trigger: ACAGTCCACCATGAAAAAGCACTTTAATGGACTATT...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| 3UTR GCA 72 bp | TCTTCTCCTTGTGCCGGGCCTCTCGGTCTGGGTCCCTaGTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACT | + |
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Preference number: 3 (lower is better) Translates to: SSPCAGPLGLGP*SCVLCIQERPT Trigger: AGTCGGCCGCTCCTGAATACAGAGAACACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR GCA 72 bp | GAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTTGTaGCGGGCCTCTCGGTCTGGGTCCCTGCTCTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: EVYRSLSAVFSL*RASRSGSLLLC Trigger: ACACAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTTGTGCCGGGCCTCTCGGAGTTTCTTCTCCTCCTaGGGACTGCCTGACTGCACC | + |
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Preference number: 3 (lower is better) Translates to: VEVYRSLSAVFSLCRASRSFFSS*GLPDCT Trigger: GGTGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAACT...CCGAGAGGCCCGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR CCA 72 bp | GCCTCTCCCGGTCTCTCTCCCCACGAGGATGTTCTGTaGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: ASPGLSPHEDVL*RCTGLSQLSSP Trigger: AGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCACAGAACATCCTCGTGGGGAGAGAGACCGGGAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 72 bp | CGGCCGACTCTGAGTCCTTGTGCGCCTTCTTTTCTCTaGGTTTCTTCTCCTCCTTGGGACTGCCTGACTGCA | + |
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Preference number: 3 (lower is better) Translates to: RPTLSPCAPSFL*VSSPPWDCLTA Trigger: TGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTCGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 72 bp | CTTTTCTCTGAGTTTCTTCTCCTCCTTGGGACTGCCTaGCTGCACCTTCAGGTGCTTTCTGAGGTCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: LFSEFLLLLGTA*LHLQVLSEVIC Trigger: GCAGATGACCTCAGAAAGCACCTGAAGGTGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAACTCAGAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 72 bp | CCTTGGGACTGCCTGACTGCACCTTCAGGTGCTTTCTaGGGTCATCTGCTTTCCAAGTATCATCTTTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: PWDCLTAPSGAF*GHLLSKYHLWF Trigger: GAACCAAAGATGATACTTGGAAAGCAGATGACCTCAGAAAGCACCTGAAGGTGCAGTCAGGCAGTCCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 72 bp | GCTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACTCTaGGTCCTTGTGCGCCTTCTTTTCTCTGAGTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ALVFSVFRSGRL*VLVRLLFSEFL Trigger: AAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACACAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| 3UTR TCA 72 bp | CTAAGTCACACAGTGAATGTGTCTGACTCAATTCTATaGGTGTCATTGAAAGCATACCAAAAGCTGTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: LSHTVNVSDSIL*VSLKAYQKLFK Trigger: CTTGAACAGCTTTTGGTATGCTTTCAATGACACTCATAGAATTGAGTCAGACACATTCACTGTGTGACTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| 3UTR CCA 72 bp | CCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTaGACATCACTTGATATTCCCTTTGAAGTTTTAGTA | + |
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Preference number: 3 (lower is better) Translates to: PKITGNTLGRAF*TSLDIPFEVLV Trigger: TACTAAAACTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| 3UTR CAA 72 bp | GTGGAGGTGTACAGGTCTCTCTCAGCTGTCTTCTCCTaGTGCCGGGCCTCTCGGTCTGGGTCCCTGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VEVYRSLSAVFS*CRASRSGSLLL Trigger: CAAGAGCAGGGACCCAGACCGAGAGGCCCGGCACAAGGAGAAGACAGCTGAGAGAGACCTGTACACCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS-3UTR GCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCCTGGACCAGGAACACTaGAGGCCTTGTTGGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSLDQEH*RPCWGP Trigger: TGGTCCCCAACAAGGCCTGCAGTGTTCCTGGTCCAG...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCCTGTGCCAGAGGTCCTaGCCAACACCAGGGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFLCQRS*PTPGPQ Trigger: TTGTGGCCCTGGTGTTGGCCAGGACCTCTGGCACAG...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCCGCCTCTTCAGGTTCTaGACGTCGACTGTGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSRLFRF*TSTVPE Trigger: CTCTGGCACAGTCGACGTCCAGAACCTGAAGAGGCG...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR TCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCAGGCCATGGACTGCCTaGTCTCTTCTTTCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFRPWTA*SLLSWP Trigger: GGGCCAGGAAAGAAGAGATCAGGCAGTCCATGGCCT...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR TCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAACCTTCTGGGGCCCTaGAGGCTGCCAAATATCCCA | + |
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Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSNLLGP*RLPNIP Trigger: TGGGATATTTGGCAGCCTTCAGGGCCCCAGAAGGTT...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACCCCTTCTCCCTTGCGTaGCTCTCCCTTTTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYPFSLA*LSLFSL Trigger: GAGGGAGAAAAGGGAGAGGCACGCAAGGGAGAAGGG...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCCACACACAGAGGAGGTaGCTGCTATCCAGCGATGGG | + |
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Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFHTQRR*LLSSDG Trigger: CCCATCGCTGGATAGCAGGCACCTCCTCTGTGTGTG...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTGGACGTCGACTGTaGCAGAGGTCCTGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFSGRRL*QRSWPT Trigger: TGTTGGCCAGGACCTCTGGCACAGTCGACGTCCAGA...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CCA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGCCGGGCCTCTCGGTCTaGGTCCCTGCTCTTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LETLLEELSGHHLIFPLKPGLSV*VPALVF Trigger: GAACACAAGAGCAGGGACCCAGACCGAGAGGCCCGG...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| 3UTR CAA 72 bp | TGTTCTCTGTATTCAGGAGCGGCCGACTCTGAGTCCTaGTGCGCCTTCTTTTCTCTGAGTTTCTTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: CSLYSGAADSES*CAFFSLSFFSS Trigger: GGAGGAGAAGAAACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS-3UTR TCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCACTGGCTCTATGGCTTaGAGAGGGCTTCGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFTGSMA*RGLRWF Trigger: GAACCACCGAAGCCCTCTTCAAGCCATAGAGCCAGT...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTCCTCCTTGGGACTaGCTGACTGCACCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFSPPWD*LTAPSG Trigger: ACCTGAAGGTGCAGTCAGGCAGTCCCAAGGAGGAGA...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTTCCTCCTTTCCTTGTaGCTCTCCCGGTCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFFLLSL*LSRSLS Trigger: GGAGAGAGACCGGGAGAGGCACAAGGAAAGGAGGAA...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACTGGGGCCCTGAAGGCTaGCAAATATCCCACACACAG | + |
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Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYWGPEG*QISHTQ Trigger: CTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCA...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR TCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACTCCTTGCCTCGACTATaGGCCTTCTCTGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYSLPRL*AFSASW Trigger: CCAAGAAGCAGAGAAGGCTCATAGTCGAGGCAAGGA...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCGGTGGTTCACTGATGTaGGGATTCCATCAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSGGSLM*GFHQWR Trigger: TCTCCACTGATGGAATCCTCACATCAGTGAACCACC...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCCTCGGTCTGGGTCCCTaGTCTTGTGTTCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSLGLGP*SCVLCI Trigger: AATACAGAGAACACAAGAGCAGGGACCCAGACCGAG...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGCCAGCTGGGTCCAGCTaGCAAACGGTCCTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LETLLEELSGHHLIFPLKPAGSS*QTVLFK Trigger: CTTGAAGAGGACCGTTTGGCAGCTGGACCCAGCTGG...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACGTTTCTTCTCCTCCTTaGGACTGCCTGACTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYVSSPP*DCLTAP Trigger: AGGTGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAAC...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACCCTTCTCCTGGGTGTTaGGTCCATACTTCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYPSPGC*VHTSLV Trigger: AACCAGGGAAGTATGGACCCAACACCCAGGAGAAGG...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAACTCCTTGGGACTGCCTaGCTGCACCTTCAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFELLGTA*LHLQVL Trigger: AAGCACCTGAAGGTGCAGTCAGGCAGTCCCAAGGAG...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCGCGCCTTCTTTTCTCTaGGTTTCTTCTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFAPSFL*VSSPPW Trigger: CCAAGGAGGAGAAGAAACTCAGAGAAAAGAAGGCGC...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACGCTTCGGTGGTTCACTaGTGTGAGGATTCCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYASVVH*CEDSIS Trigger: ACTGATGGAATCCTCACATCAGTGAACCACCGAAGC...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCCTGAAGGCAGGAATTTaGCACTCAGTGTTTGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSLKAGI*HSVFVS Trigger: CGACACAAACACTGAGTGTCAAATTCCTGCCTTCAG...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCGACTCTGAGTCCTTGTaGGCCTTCTTTTCTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSDSESL*AFFSLS Trigger: ACTCAGAGAAAAGAAGGCGCACAAGGACTCAGAGTC...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAACTCCAGATACAGCCGTaGCTTCTCCTGGGTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFELQIQP*LLLGVG Trigger: CCCAACACCCAGGAGAAGGCACGGCTGTATCTGGAG...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCCTTGTTGGGGACCACTaGAGACTAGTAACAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFLVGDH*RLVTAW Trigger: CCATGCTGTTACTAGTCTGCAGTGGTCCCCAACAAG...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTTCTCTCTCTCTCTGTCCTTGCCTCGACTATGAGCCTTCTCTGCTTCTTGTTTTCAGGAGTCCTGTaGCTTCCTGAAGTTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLSVLASTMSLLCFLFSGVL*LPEVDT Trigger: AGTGTCAACTTCAGGAAGGCACAGGACTCCTGAAAA...CAAGAAGCAGAGAAGGCTCATAGTCGAGGCAAGGACAGAGAGAGAGAGAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAGGAGAGATGGGCTGCTaGGCCACAGGACCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MKMVFTLSHTVNVSDSILGEMGC*ATGPRS Trigger: TGACCTGGGTCCTGTGGCCCAGCAGCCCATCTCTCC...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCAGGCTTGTGTTCAGTTaGGATGAGCTGTCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFRLVFS*DELSLM Trigger: CATCAGTGACAGCTCATCTCAACTGAACACAAGCCT...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAATGTTGTCCCACTGCATaGTGGGCCTCTCAGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFECCPTA*WASQTS Trigger: TGACGTCTGAGAGGCCCATCATGCAGTGGGACAACA...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAAGCCGTGCCTTCTCCTaGGTGTTGGGTCCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFESRAFS*VLGPYF Trigger: GAAGTATGGACCCAACACCCAGGAGAAGGCACGGCT...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAACTCTCAGACGTCAGCTaGTGCAGCCTGATGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFELSDVS*CSLMLP Trigger: TGGAAGCATCAGGCTGCACCAGCTGACGTCTGAGAG...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTGTGTTCAGTTGAGATaGGCTGTCACTGATGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFCVQLR*AVTDVE Trigger: CTCAACATCAGTGACAGCTCATCTCAACTGAACACA...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGAGAATGTCGGGGTCCTaGAAGCCCAGAAACAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LETLLEELSGHHLIFPLKRMSGS*KPRNNC Trigger: GCAATTGTTTCTGGGCTTTCAGGACCCCGACATTCT...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCGGAAGCAATATGAAATaGCAAGCCTGCCATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSGSNMK*QACHFF Trigger: GAAGAAATGGCAGGCTTGTCATTTCATATTGCTTCC...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACCCTCTGAACTCGAGATaGATGCAAGCAGGATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYPLNSR*MQAGYF Trigger: AAAGTATCCTGCTTGCATGCATCTCGAGTTCAGAGG...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAATCAGACGTCAGCTGGTaGAGCCTGATGCTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFESDVSW*SLMLPS Trigger: AGATGGAAGCATCAGGCTGCACCAGCTGACGTCTGA...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCTCCAAGTATCATCTTTaGTTCTTCTCTTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSSKYHL*FFSSQA Trigger: AGCCTGGGAAGAGAAGAACCAAAGATGATACTTGGA...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACGCCTTCTCTGCTTCTTaGTCTCGATGTCTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKNRRLMEATSKVSNFSYAFSAS*SRCLSF Trigger: AAAAGAGAGACATCGAGACCAAGAAGCAGAGAAGGC...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTGTATTTCCCTTTTCTaGGCCAGAGGAAGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFCISLF*ARGSSS Trigger: CGAAGAACTTCCTCTGGCCCAGAAAAGGGAAATACA...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCGGGTCCATACTTCCCTaGTTTCTATATCTTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSGSILP*FLYLQS Trigger: AGACTGAAGATATAGAAACCAGGGAAGTATGGACCC...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTTCCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTCTAGACGCATCGTCCTaGACCAGGAACACTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVPKITGNTLGRAFWTSLLDASS*TRNTAG Trigger: GCCTGCAGTGTTCCTGGTCCAGGACGATGCGTCTAG...AAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAACCTTCAGGTGCTTTCTaGGGTCATCTGCTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEPSGAF*GHLLSK Trigger: CTTGGAAAGCAGATGACCTCAGAAAGCACCTGAAGG...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTTCCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTTCAGCTGGTGCAGCCTaGTGCTTCCATCTGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVPKITGNTLGRAFWTSLSAGAA*CFHLNS Trigger: GCTGTTCAGATGGAAGCATCAGGCTGCACCAGCTGA...AAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGACTGCACCTTCAGGTaGTTTCTGAGGTCATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEDCTFR*FLRSSA Trigger: AGCAGATGACCTCAGAAAGCACCTGAAGGTGCAGTC...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATCATCTTCTAAGTTaGGCAGATATTCATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSNHLLS*ADIHQA Trigger: GGCCTGATGAATATCTGCCCAACTTAGAAGATGATT...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCAGACTGTTACCCAACTaGATTACAGTACTGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFRLLPN*ITVLCT Trigger: GGTACACAGTACTGTAATCCAGTTGGGTAACAGTCT...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAAGCCACAAGCTTATCTaGAGAGATGGGCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MKMVFTLSHTVNVSDSILSHKLI*RDGLLG Trigger: GCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCT...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCGTCCAACCTTGCTTCTaGAACATTTTCAAAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSVQPCF*NIFKDN Trigger: GTTATCTTTGAAAATGTTTCAGAAGCAAGGTTGGAC...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTTTCTCACGGTCTTTTaGATCTTTCCTCCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENRKNRRLMEATSKVSNFFLTVF*IFPPFL Trigger: AAGGAAAGGAGGAAAGATGCAAAAGACCGTGAGAAA...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAACTTTCTCTGCCATCTaGCGGCCACGCATATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MKMVFTLSHTVNVSDSILTFSAI*RPRISR Trigger: TCGAGATATGCGTGGCCGGCAGATGGCAGAGAAAGT...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAATTTTCTCCCTCATGCTaGTCTTCTCTCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEFSPSC*SSLSAS Trigger: AGAGGCTGAGAGAGAAGAGCAGCATGAGGGAGAAAA...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGCTTCATGCTCATTATTaGTGTCATCGTCTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LETLLEELSGHHLIFPLKLHAHY*CHRLHR Trigger: GCGATGGAGACGATGACAGCAATAATGAGCATGAAG...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCTTTTCTCTAGCTTCATaGTCATTATTGCTGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: VQENRKNRRLMEATSKVSFSLAS*SLLLSS Trigger: CGATGACAGCAATAATGAGCATGAAGCTAGAGAAAA...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAATCCAGGGAAGCAATATaGAATGACAAGCCTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFESREAI*NDKPAI Trigger: AATGGCAGGCTTGTCATTTCATATTGCTTCCCTGGA...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAATACTGTGTACCAACTTaGTCCTTCCTCCAGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEYCVPT*SFLQVS Trigger: TGATACCTGGAGGAAGGATCAAGTTGGTACACAGTA...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTATGCAGTCCTTCTTTGTaGCGCTTCTCTCTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKMVFTLSHTVNVSDSILCSPSL*RFSLCL Trigger: CAGACACAGAGAGAAGCGGCACAAAGAAGGACTGCA...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTTCCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTCCCGATCTGCGTCTTTaGCTTTCCTGTGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVPKITGNTLGRAFWTSLPDLRL*LSCASS Trigger: AGAAGAAGCACAGGAAAGCCAAAGACGCAGATCGGG...AAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAACATAATGGTGGATCCTaGAGTCTTCTCTTAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEHNGGS*SLLLSP Trigger: GGGACTTAAGAGAAGACTCCAGGATCCACCATTATG...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR TCA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGCACTGATCGCCTTTTaGATTTCCTGTATTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEALIAF*ISCISL Trigger: AAGGGAAATACAGGAAATTCAAAAGGCGATCAGTGC...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR TCA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAGCAGCATGTGACCTTTaGCTCACATATCAGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: MKMVFTLSHTVNVSDSILAACDL*LTYQNL Trigger: AAGGTTCTGATATGTGAGTCAAAGGTCACATGCTGC...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR TCA 90 bp | ATAGTTCCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTTCTTCGGTACAACTGTaGCATCAGAGAAGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVPKITGNTLGRAFWTSLSSVQL*HQRSLF Trigger: AAAAAGACTTCTCTGATGTCACAGTTGTACCGAAGA...AAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR TCA 90 bp | ATAGTTCCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTAAAGTGATTAGGATCTaGAGGCAGGAATTTGACACT | + |
|
Preference number: 4 (lower is better) Translates to: IVPKITGNTLGRAFWTSLKVIRI*RQEFDT Trigger: AGTGTCAAATTCCTGCCTTCAGATCCTAATCACTTT...AAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAAAGCCCAGAAACAATTaGTCAGTCTCACATAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: MKMVFTLSHTVNVSDSILKPRNN*SVSHNG Trigger: ACCATTATGTGAGACTGAGCAATTGTTTCTGGGCTT...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| 3UTR CAA 72 bp | TGCTTTCTGAGGTCATCTGCTTTCCAAGTATCATCTTaGGTTCTTCTCAAAGTTAAAGTCAACAACCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CFLRSSAFQVSS*VLLKVKVNNLL Trigger: TAGAAGGTTGTTGACTTTAACTTTGAGAAGAACCAAAGATGATACTTGGAAAGCAGATGACCTCAGAAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS-3UTR TCA 90 bp | ATAGTTCCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTAGTTCACTATCTTTATaGGAAAGACTGTTACCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IVPKITGNTLGRAFWTSLSSLSL*ERLLPN Trigger: GTTGGGTAACAGTCTTTCTCATAAAGATAGTGAACT...AAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR GCA 90 bp | ATAGTTCCAAAAATAACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTAATTCCCTTTTCTTGTaGTCTTCTTTCGAAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVPKITGNTLGRAFWTSLNSLFL*SSFEDL Trigger: GAGATCTTCGAAAGAAGAGCACAAGAAAAGGGAATT...AAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGTTATTTTTGGAACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 90 bp | CTGCTGGGGTGGTCCACCGCCTCTTCAGGTTCTGGACGTCGACTGTaGCAGAGGTCCTGGCCAACACCAGGGCCACAAAACTACCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGWSTASSGSGRRL*QRSWPTPGPQNYHW Trigger: CCAGTGGTAGTTTTGTGGCCCTGGTGTTGGCCAGGACCTCTGGCACAGTCGACGTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | CTATGCTCGTCTACTGCTGGGGTGGTCCACCGCCTCTTCAGGTTCTaGACGTCGACTGTGCCAGAGGTCCTGGCCAACACCAGGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LCSSTAGVVHRLFRF*TSTVPEVLANTRAT Trigger: TGTGGCCCTGGTGTTGGCCAGGACCTCTGGCACAGTCGACGTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAGTAGACGAGCATAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | TCTGAAGAAGCAGGCGCAGCTGGCTATGCTCGTCTACTGCTGGGGTaGTCCACCGCCTCTTCAGGTTCTGGACGTCGACTGTGCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEEAGAAGYARLLLG*STASSGSGRRLCQR Trigger: CCTCTGGCACAGTCGACGTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAGTAGACGAGCATAGCCAGCTGCGCCTGCTTCTTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | TCCACCGCCTCTTCAGGTTCTGGACGTCGACTGTGCCAGAGGTCCTaGCCAACACCAGGGCCACAAAACTACCACTGGTCTTCTCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: STASSGSGRRLCQRS*PTPGPQNYHWSSPV Trigger: AACCGGAGAAGACCAGTGGTAGTTTTGTGGCCCTGGTGTTGGCCAGGACCTCTGGCACAGTCGACGTCCAGAACCTGAAGAGGCGGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | TCATTTCTGAAGAAGCAGGCGCAGCTGGCTATGCTCGTCTACTGCTaGGGTGGTCCACCGCCTCTTCAGGTTCTGGACGTCGACTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLKKQAQLAMLVYC*GGPPPLQVLDVDCA Trigger: GGCACAGTCGACGTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAGTAGACGAGCATAGCCAGCTGCGCCTGCTTCTTCAGAAATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | GAGTCCTGTGCCTTCCTGAAGTTGACACTCAGCCTCGCCTCTGGATaGGTCCAGAAACTCCTCCACAAACCGCACCTGGAGCTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESCAFLKLTLSLASG*VQKLLHKPHLELPR Trigger: CCTGGGAAGCTCCAGGTGCGGTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCGAGGCTGAGTGTCAACTTCAGGAAGGCACAGGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS CCA 90 bp | AACACTGCAGGCCTTGTTGGGGACCACTGCAGACTAGTAACAGCATaGCCACTGGTGCTGTTGTCCCACTGCATGATGGGCCTCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NTAGLVGDHCRLVTA*PLVLLSHCMMGLSD Trigger: GTCTGAGAGGCCCATCATGCAGTGGGACAACAGCACCAGTGGCCATGCTGTTACTAGTCTGCAGTGGTCCCCAACAAGGCCTGCAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | GGTCTTCTCCGGTTCCCCCACGATAGTCATAGCCACAAGCTTATCTaGAGAGATGGGCTGCTGGGCCACAGGACCCAGGTCATTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLLRFPHDSHSHKLI*RDGLLGHRTQVILK Trigger: CTTGAGAATGACCTGGGTCCTGTGGCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCTATGACTATCGTGGGGGAACCGGAGAAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | TCAGGAGTCCTGTGCCTTCCTGAAGTTGACACTCAGCCTCGCCTCTaGATGAGTCCAGAAACTCCTCCACAAACCGCACCTGGAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVLCLPEVDTQPRL*MSPETPPQTAPGAS Trigger: GGAAGCTCCAGGTGCGGTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCGAGGCTGAGTGTCAACTTCAGGAAGGCACAGGACTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS-3UTR CAA 90 bp | GGGTCCCTGCTCTTGTGTTCTCTGTATTCAGGAGCGGCCGACTCTGAGTCCTTGTGTGCCTTCCTGAAGTaGACACTCAGCCTCGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLCSLYSGAADSESLCAFLK*TLSLAS Trigger: AGAGGCGAGGCTGAGTGTCAACTTCAGGAAGGCACA...CAAGGACTCAGAGTCGGCCGCTCCTGAATACAGAGAACACAAGAGCAGGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS GCA 90 bp | ATCCCAGACATAGATCCTAGACGCATCGTCCTGGACCAGGAACACTaGAGGCCTTGTTGGGGACCACTGCAGACTAGTAACAGCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPDIDPRRIVLDQEH*RPCWGPLQTSNSMA Trigger: GGCCATGCTGTTACTAGTCTGCAGTGGTCCCCAACAAGGCCTGCAGTGTTCCTGGTCCAGGACGATGCGTCTAGGATCTATGTCTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | CTGGTGCTGTTGTCCCACTGCATGATGGGCCTCTCAGACGTCAGCTaGTGCAGCCTGATGCTTCCATCTGAACAGCCAGCCAAGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLSHCMMGLSDVS*CSLMLPSEQPAKNT Trigger: AGTATTCTTGGCTGGCTGTTCAGATGGAAGCATCAGGCTGCACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGACAACAGCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 90 bp | GTGCTGTTGTCCCACTGCATGATGGGCCTCTCAGACGTCAGCTGGTaGAGCCTGATGCTTCCATCTGAACAGCCAGCCAAGAATACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLSHCMMGLSDVSW*SLMLPSEQPAKNTV Trigger: AACAGTATTCTTGGCTGGCTGTTCAGATGGAAGCATCAGGCTGCACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGACAACAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 90 bp | TCCCCCACGATAGTCATAGCCACAAGCTTATCTGGAGAGATGGGCTaGTGGGCCACAGGACCCAGGTCATTCTCAAGAAGATCCCAGACA | + |
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Preference number: 5 (lower is better) Translates to: SPTIVIATSLSGEMG*WATGPRSFSRRSQT Trigger: TGTCTGGGATCTTCTTGAGAATGACCTGGGTCCTGTGGCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCTATGACTATCGTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | TCATGCTGCTCTTCTCTCTCAGCCTCTTCTCCCGATCTGCGTCTTTaGCTTTCCTGTGCTTCTTCTCGCCGTCCTCCTTGTACAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCCSSLSASSPDLRL*LSCASSRRPPCTAS Trigger: ACTGGCTGTACAAGGAGGACGGCGAGAAGAAGCACAGGAAAGCCAAAGACGCAGATCGGGAGAAGAGGCTGAGAGAGAAGAGCAGCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 90 bp | TTTCTCCCTCATGCTGCTCTTCTCTCTCAGCCTCTTCTCCCGATCTaGGTCTTTGGCTTTCCTGTGCTTCTTCTCGCCGTCCTCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLPHAALLSQPLLPI*VFGFPVLLLAVLLV Trigger: TACAAGGAGGACGGCGAGAAGAAGCACAGGAAAGCCAAAGACGCAGATCGGGAGAAGAGGCTGAGAGAGAAGAGCAGCATGAGGGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 90 bp | GTGACCTTTGACTCACATATCAGAACCTTCTGGGGCCCTGAAGGCTaGCAAATATCCCACACACAGAGGAGGTGCCTGCTATCCAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTFDSHIRTFWGPEG*QISHTQRRCLLSSD Trigger: ATCGCTGGATAGCAGGCACCTCCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCAGAAGGTTCTGATATGTGAGTCAAAGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | AGTAGCAACTGGCTCTATGGCTTGAAGAGGGCTTCGGTGGTTCACTaGTGTGAGGATTCCATCAGTGGAGAATGTCGGGGTCCTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSNWLYGLKRASVVH*CEDSISGECRGPES Trigger: GCTTTCAGGACCCCGACATTCTCCACTGATGGAATCCTCACATCAGTGAACCACCGAAGCCCTCTTCAAGCCATAGAGCCAGTTGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | CTAAAGCAGCAGCATGTGACCTTTGACTCACATATCAGAACCTTCTaGGGCCCTGAAGGCTGCCAAATATCCCACACACAGAGGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKQQHVTFDSHIRTF*GPEGCQISHTQRRC Trigger: GCACCTCCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCAGAAGGTTCTGATATGTGAGTCAAAGGTCACATGCTGCTGCTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | CGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTCTTACTCAGCTGTCTTCTCCTaGTGCCGGGCCTCTCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKNRRLMEATSKVSNFSYSAVFS*CRASRS Trigger: AGACCGAGAGGCCCGGCACAAGGAGAAGACAGCTGA...GTAAGAGAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCTGGCCACTGGTGCTGTaGTCCCACTGCATGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ENRKNRRLMEATSKVSNFWPLVL*SHCMMG Trigger: GCCCATCATGCAGTGGGACAACAGCACCAGTGGCCA...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | GAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCAATTTCGGAACACTGCAGGCCTaGTTGGGGACCACTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ENRKNRRLMEATSKVSNFGTLQA*LGTTAD Trigger: GTCTGCAGTGGTCCCCAACAAGGCCTGCAGTGTTCC...GAAATTGCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | GCTTATAAGTCCCATGTCGGTGCCGACAACAAAGTGATTAGGATCTaGAGGCAGGAATTTGACACTCAGTGTTTGTGTCGACCCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AYKSHVGADNKVIRI*RQEFDTQCLCRPPQ Trigger: CTGTGGGGGTCGACACAAACACTGAGTGTCAAATTCCTGCCTTCAGATCCTAATCACTTTGTTGTCGGCACCGACATGGGACTTATAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | GAAGTCTTTTTCTTCGCTACCTCCAGATACAGCCGTGCCTTCTCCTaGGTGTTGGGTCCATACTTCCCTGGTTTCTATATCTTCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVFFFATSRYSRAFS*VLGPYFPGFYIFSL Trigger: CAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACGGCTGTATCTGGAGGTAGCGAAGAAAAAGACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGAGTTTCTTCTCCTCCTaGGGACTGCCTGACTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LETLLEELSGHHLIFPLKSFFSS*GLPDCT Trigger: GGTGCAGTCAGGCAGTCCCAAGGAGGAGAAGAAACT...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGCCTTCTCCTGGGTGTaGGGTCCATACTTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEAFSWV*GPYFPG Trigger: ACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGC...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGACAACCACCCACACATaGAGAACCCCAGTCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LETLLEELSGHHLIFPLKTTTHT*RTPVSS Trigger: GGACGAGACTGGGGTTCTCAATGTGTGGGTGGTTGT...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | CTGGTACTGTGGCTTATAAGTCCCATGTCGGTGCCGACAACAAAGTaGTTAGGATCTGAAGGCAGGAATTTGACACTCAGTGTTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLWLISPMSVPTTK*LGSEGRNLTLSVCV Trigger: GACACAAACACTGAGTGTCAAATTCCTGCCTTCAGATCCTAATCACTTTGTTGTCGGCACCGACATGGGACTTATAAGCCACAGTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 90 bp | CTTTTCTGGGCCAGAGGAAGTTCTTCGGCCTTTTCTCTAGCTTCATaGTCATTATTGCTGTCATCGTCTCCATCGCAAACCTCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFWARGSSSAFSLAS*SLLLSSSPSQTSKS Trigger: TGACTTTGAGGTTTGCGATGGAGACGATGACAGCAATAATGAGCATGAAGCTAGAGAAAAGGCCGAAGAACTTCCTCTGGCCCAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | GCATCTGTCCAGGGCTCCTTTGTATACTCCGTCCAACCTTGCTTCTaGAACATTTTCAAAGATAACTCGCCAACCCTTTCATTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASVQGSFVYSVQPCF*NIFKDNSPTLSFSA Trigger: TGCAGAGAATGAAAGGGTTGGCGAGTTATCTTTGAAAATGTTTCAGAAGCAAGGTTGGACGGAGTATACAAAGGAGCCCTGGACAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 90 bp | CAGATACAGCCGTGCCTTCTCCTGGGTGTTGGGTCCATACTTCCCTaGTTTCTATATCTTCAGTCTGAATGTCTCTCTCAACATTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QIQPCLLLGVGSILP*FLYLQSECLSQHYL Trigger: AAGATAATGTTGAGAGAGACATTCAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACGGCTGTATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAAGCTCCCCTTCTCCCTaGCGTGCCTCTCCCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MKMVFTLSHTVNVSDSILSSPSP*RASPFS Trigger: AGAAAAGGGAGAGGCACGCAAGGGAGAAGGGGAGCT...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | GTTCAAGAAAACCGTAAAAACAGAAGGCTGATGGAGGCCACCTCCAAAGTGAGCTGCACTGATCGCCTTTaGAATTTCCTGTATTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VQENRKNRRLMEATSKVSCTDRL*NFLYFP Trigger: AGGGAAATACAGGAAATTCAAAAGGCGATCAGTGCA...GCTCACTTTGGAGGTGGCCTCCATCAGCCTTCTGTTTTTACGGTTTTCTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | AAAGATAACTCGCCAACCCTTTCATTCTCTGCACTGATCGCCTTTTaGATTTCCTGTATTTCCCTTTTCTGGGCCAGAGGAAGTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KDNSPTLSFSALIAF*ISCISLFWARGSSS Trigger: CGAAGAACTTCCTCTGGCCCAGAAAAGGGAAATACAGGAAATTCAAAAGGCGATCAGTGCAGAGAATGAAAGGGTTGGCGAGTTATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | AACCTGAGATATCTGCTTTTGGTAATTCAACAACCACCCACACATTaGGAACCCCAGTCTCGTCCAGGGAAGCAATATGAAATGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLRYLLLVIQQPPTH*EPQSRPGKQYEMTS Trigger: GCTTGTCATTTCATATTGCTTCCCTGGACGAGACTGGGGTTCTCAATGTGTGGGTGGTTGTTGAATTACCAAAAGCAGATATCTCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGAGCCTTCTCTGCTTCTaGGTCTCGATGTCTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LETLLEELSGHHLIFPLKSLLCF*VSMSLF Trigger: AAAGAGAGACATCGAGACCAAGAAGCAGAGAAGGCT...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 90 bp | GAGAAAGACTGTTACCCAACTGGATTACAGTACTGTGTACCAACTTaGTCCTTCCTCCAGGTATCAGACCTAAATCACTCATTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: EKDCYPTGLQYCVPT*SFLQVSDLNHSLNL Trigger: CAGGTTCAATGAGTGATTTAGGTCTGATACCTGGAGGAAGGATCAAGTTGGTACACAGTACTGTAATCCAGTTGGGTAACAGTCTTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGCTTTCTCACGGTCTTTaGCATCTTTCCTCCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LETLLEELSGHHLIFPLKLSHGL*HLSSFP Trigger: AGGAAAGGAGGAAAGATGCAAAAGACCGTGAGAAAG...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAAACTGGCTCTATGGCTaGAAGAGGGCTTCGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MKMVFTLSHTVNVSDSILNWLYG*KRASVV Trigger: AACCACCGAAGCCCTCTTCAAGCCATAGAGCCAGTT...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGAGATACTCTCCAATCTaGCCTGGTACTGTGGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LETLLEELSGHHLIFPLKRYSPI*PGTVAY Trigger: ATAAGCCACAGTACCAGGCAAGATTGGAGAGTATCT...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAGCTGAGATATCTGCTTTaGGTAATTCAACAACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LETLLEELSGHHLIFPLKLRYLL*VIQQPP Trigger: GGGTGGTTGTTGAATTACCAAAAGCAGATATCTCAG...CTTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTATTCCAAGTATCATCTTaGGTTCTTCTCTTCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MKMVFTLSHTVNVSDSILFQVSS*VLLFPG Trigger: GCCTGGGAAGAGAAGAACCAAAGATGATACTTGGAA...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGAAACACTCTTGGAAGAGCTTTCTGGACATCACTTGATATTCCCTTTGAAATACTCCGTCCAACCTaGCTTCTGAAACATTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGNTLGRAFWTSLDIPFEILRPT*LLKHFQ Trigger: TTGAAAATGTTTCAGAAGCAAGGTTGGACGGAGTAT...TTCAAAGGGAATATCAAGTGATGTCCAGAAAGCTCTTCCAAGAGTGTTTCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS-3UTR CAA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTATCTGAAGGCAGGAATTaGACACTCAGTGTTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MKMVFTLSHTVNVSDSILSEGRN*TLSVCV Trigger: GACACAAACACTGAGTGTCAAATTCCTGCCTTCAGA...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAGACGATGTGAGGCTGTaGCAAAATCCACAAAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: MKMVFTLSHTVNVSDSILDDVRL*QNPQKF Trigger: GAATTTTTGTGGATTTTGCAACAGCCTCACATCGTC...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAGTAGCCTCTAAATCGTaGTCTTCTTTTTCAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MKMVFTLSHTVNVSDSILVASKS*SSFSSS Trigger: GGAACTTGAAAAAGAAGACAACGATTTAGAGGCTAC...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGGTTTTCACACTAAGTCACACAGTGAATGTGTCTGACTCAATTCTAAAATCATCTTCTAAGTaGGGCAGATATTCATCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MKMVFTLSHTVNVSDSILKSSSK*GRYSSG Trigger: GCCTGATGAATATCTGCCCAACTTAGAAGATGATTT...TAGAATTGAGTCAGACACATTCACTGTGTGACTTAGTGTGAAAACCATCTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 72 bp | GCAGGCGCAGCTGGCTATGCTCGTCTACTGCTGGGGTaGTCCACCGCCTCTTCAGGTTCTGGACGTCGACTG | + |
|
Preference number: 6 (lower is better) Translates to: AGAAGYARLLLG*STASSGSGRRL Trigger: CAGTCGACGTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAGTAGACGAGCATAGCCAGCTGCGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CCA 72 bp | TCTACTGCTGGGGTGGTCCACCGCCTCTTCAGGTTCTaGACGTCGACTGTGCCAGAGGTCCTGGCCAACACC | + |
|
Preference number: 6 (lower is better) Translates to: STAGVVHRLFRF*TSTVPEVLANT Trigger: GGTGTTGGCCAGGACCTCTGGCACAGTCGACGTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAGTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS GCA 72 bp | CTGAAGAAGCAGGCGCAGCTGGCTATGCTCGTCTACTaGTGGGGTGGTCCACCGCCTCTTCAGGTTCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKKQAQLAMLVY*WGGPPPLQVLD Trigger: GTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAGTAGACGAGCATAGCCAGCTGCGCCTGCTTCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CCA 72 bp | AAGAAGCAGGCGCAGCTGGCTATGCTCGTCTACTGCTaGGGTGGTCCACCGCCTCTTCAGGTTCTGGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: KKQAQLAMLVYC*GGPPPLQVLDV Trigger: GACGTCCAGAACCTGAAGAGGCGGTGGACCACCCCAGCAGTAGACGAGCATAGCCAGCTGCGCCTGCTTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CAA 90 bp | GTCTGTCCTCCACTTCCCTGTCGGAGAGCGAGCTCCCCTTCTCCCTaGCGTGCCTCTCCCTTTTCTCCCTCATGCTGCTCTTCTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VCPPLPCRRASSPSP*RASPFSPSCCSSLS Trigger: TGAGAGAGAAGAGCAGCATGAGGGAGAAAAGGGAGAGGCACGCAAGGGAGAAGGGGAGCTCGCTCTCCGACAGGGAAGTGGAGGACAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CAA 90 bp | GTTGGGGACCACTGCAGACTAGTAACAGCATGGCCACTGGTGCTGTaGTCCCACTGCATGATGGGCCTCTCAGACGTCAGCTGGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VGDHCRLVTAWPLVL*SHCMMGLSDVSWCS Trigger: GCTGCACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGACAACAGCACCAGTGGCCATGCTGTTACTAGTCTGCAGTGGTCCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | TCCCACTGCATGATGGGCCTCTCAGACGTCAGCTGGTaGAGCCTGATGCTTCCATCTGAACAGCCAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SHCMMGLSDVSW*SLMLPSEQPAK Trigger: CTTGGCTGGCTGTTCAGATGGAAGCATCAGGCTGCACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS GCA 72 bp | CTAGTAACAGCATGGCCACTGGTGCTGTTGTCCCACTaGATGATGGGCCTCTCAGACGTCAGCTGGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVTAWPLVLLSH*MMGLSDVSWCS Trigger: GCTGCACCAGCTGACGTCTGAGAGGCCCATCATGCAGTGGGACAACAGCACCAGTGGCCATGCTGTTACTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 72 bp | GGCCTTGTTGGGGACCACTGCAGACTAGTAACAGCATaGCCACTGGTGCTGTTGTCCCACTGCATGATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLVGDHCRLVTA*PLVLLSHCMMG Trigger: GCCCATCATGCAGTGGGACAACAGCACCAGTGGCCATGCTGTTACTAGTCTGCAGTGGTCCCCAACAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS TCA 72 bp | GCCTTCCTGAAGTTGACACTCAGCCTCGCCTCTGGATaGGTCCAGAAACTCCTCCACAAACCGCACCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AFLKLTLSLASG*VQKLLHKPHLE Trigger: CTCCAGGTGCGGTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCGAGGCTGAGTGTCAACTTCAGGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS CCA 72 bp | TCTTCAGGTTCTGGACGTCGACTGTGCCAGAGGTCCTaGCCAACACCAGGGCCACAAAACTACCACTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGSGRRLCQRS*PTPGPQNYHWS Trigger: AGACCAGTGGTAGTTTTGTGGCCCTGGTGTTGGCCAGGACCTCTGGCACAGTCGACGTCCAGAACCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CAA 72 bp | CACTGCAGACTAGTAACAGCATGGCCACTGGTGCTGTaGTCCCACTGCATGATGGGCCTCTCAGACGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HCRLVTAWPLVL*SHCMMGLSDVS Trigger: GCTGACGTCTGAGAGGCCCATCATGCAGTGGGACAACAGCACCAGTGGCCATGCTGTTACTAGTCTGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CAA 90 bp | CTCATGCTGCTCTTCTCTCTCAGCCTCTTCTCCCGATCTGCGTCTTaGGCTTTCCTGTGCTTCTTCTCGCCGTCCTCCTTGTACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LMLLFSLSLFSRSAS*AFLCFFSPSSLYSQ Trigger: CTGGCTGTACAAGGAGGACGGCGAGAAGAAGCACAGGAAAGCCAAAGACGCAGATCGGGAGAAGAGGCTGAGAGAGAAGAGCAGCATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | CATGCTGCTCTTCTCTCTCAGCCTCTTCTCCCGATCTaGGTCTTTGGCTTTCCTGTGCTTCTTCTCGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: HAALLSQPLLPI*VFGFPVLLLAV Trigger: GACGGCGAGAAGAAGCACAGGAAAGCCAAAGACGCAGATCGGGAGAAGAGGCTGAGAGAGAAGAGCAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | GTCCTCTTCAAGCAATACAGCAACCACCTGGCACGCTaGCCGGAGAAAGTTAGCCAACCTCGGAGTGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VLFKQYSNHLAR*PEKVSQPRSVD Trigger: ATCGACACTCCGAGGTTGGCTAACTTTCTCCGGGCAGCGTGCCAGGTGGTTGCTGTATTGCTTGAAGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 72 bp | CTGTGCCTTCCTGAAGTTGACACTCAGCCTCGCCTCTaGATGAGTCCAGAAACTCCTCCACAAACCGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LCLPEVDTQPRL*MSPETPPQTAP Trigger: AGGTGCGGTTTGTGGAGGAGTTTCTGGACTCATCCAGAGGCGAGGCTGAGTGTCAACTTCAGGAAGGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222679.2 |
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| CDS GCA 72 bp | GACTCACATATCAGAACCTTCTGGGGCCCTGAAGGCTaGCAAATATCCCACACACAGAGGAGGTGCCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DSHIRTFWGPEG*QISHTQRRCLL Trigger: TAGCAGGCACCTCCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCCCAGAAGGTTCTGATATGTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | ATAGATCCTAGACGCATCGTCCTGGACCAGGAACACTaGAGGCCTTGTTGGGGACCACTGCAGACTAGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: IDPRRIVLDQEH*RPCWGPLQTSN Trigger: GTTACTAGTCTGCAGTGGTCCCCAACAAGGCCTGCAGTGTTCCTGGTCCAGGACGATGCGTCTAGGATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 72 bp | TCTTCTCTCTCAGCCTCTTCTCCCGATCTGCGTCTTTaGCTTTCCTGTGCTTCTTCTCGCCGTCCTCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLSASSPDLRL*LSCASSRRPPC Trigger: ACAAGGAGGACGGCGAGAAGAAGCACAGGAAAGCCAAAGACGCAGATCGGGAGAAGAGGCTGAGAGAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 72 bp | TGGCTCTATGGCTTGAAGAGGGCTTCGGTGGTTCACTaGTGTGAGGATTCCATCAGTGGAGAATGTCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: WLYGLKRASVVH*CEDSISGECRG Trigger: ACCCCGACATTCTCCACTGATGGAATCCTCACATCAGTGAACCACCGAAGCCCTCTTCAAGCCATAGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | AGAAGTCTTTTTCTTCGCTACCTCCAGATACAGCCGTaGCTTCTCCTGGGTGTTGGGTCCATACTTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLFLRYLQIQP*LLLGVGSILPW Trigger: CCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACGGCTGTATCTGGAGGTAGCGAAGAAAAAGACTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | ATAGTCATAGCCACAAGCTTATCTGGAGAGATGGGCTaGTGGGCCACAGGACCCAGGTCATTCTCAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IVIATSLSGEMG*WATGPRSFSRR Trigger: TCTTCTTGAGAATGACCTGGGTCCTGTGGCCCAGCAGCCCATCTCTCCAGATAAGCTTGTGGCTATGACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CCA 72 bp | TTCTTCGCTACCTCCAGATACAGCCGTGCCTTCTCCTaGGTGTTGGGTCCATACTTCCCTGGTTTCTATATC | + |
|
Preference number: 6 (lower is better) Translates to: FFATSRYSRAFS*VLGPYFPGFYI Trigger: GATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACGGCTGTATCTGGAGGTAGCGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 72 bp | CTCAGACGTCAGCTGGTGCAGCCTGATGCTTCCATCTaGACAGCCAGCCAAGAATACTGTTTCTTCAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: LRRQLVQPDASI*TASQEYCFFKW Trigger: CCATTTGAAGAAACAGTATTCTTGGCTGGCTGTTCAGATGGAAGCATCAGGCTGCACCAGCTGACGTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CAA 72 bp | CTCAGGTTTGAACACCCTGGGAGATACTCTCCAATCTaGCCTGGTACTGTGGCTTATAAGTCCCATGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LRFEHPGRYSPI*PGTVAYKSHVG Trigger: ACCGACATGGGACTTATAAGCCACAGTACCAGGCAAGATTGGAGAGTATCTCCCAGGGTGTTCAAACCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | GCCAGAGGAAGTTCTTCGGCCTTTTCTCTAGCTTCATaGTCATTATTGCTGTCATCGTCTCCATCGCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: ARGSSSAFSLAS*SLLLSSSPSQT Trigger: GGTTTGCGATGGAGACGATGACAGCAATAATGAGCATGAAGCTAGAGAAAAGGCCGAAGAACTTCCTCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS GCA 72 bp | ATGAACAGAGACCACGGTCTGCCTCTGAACTCGAGATaGATGCAAGCAGGATACTTTCCGACTCTGAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MNRDHGLPLNSR*MQAGYFPTLKK Trigger: TTTCTTCAGAGTCGGAAAGTATCCTGCTTGCATGCATCTCGAGTTCAGAGGCAGACCGTGGTCTCTGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CAA 90 bp | TTTTTCTTCGCTACCTCCAGATACAGCCGTGCCTTCTCCTGGGTGTaGGGTCCATACTTCCCTGGTTTCTATATCTTCAGTCTGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: FFFATSRYSRAFSWV*GPYFPGFYIFSLNV Trigger: GACATTCAGACTGAAGATATAGAAACCAGGGAAGTATGGACCCAACACCCAGGAGAAGGCACGGCTGTATCTGGAGGTAGCGAAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS CAA 90 bp | TCAATCACATTAACTTTTATGGGTCTGACACCGTGTTGCTCAGGTTaGAACACCCTGGGAGATACTCTCCAATCTTGCCTGGTACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SITLTFMGLTPCCSG*NTLGDTLQSCLVLW Trigger: CCACAGTACCAGGCAAGATTGGAGAGTATCTCCCAGGGTGTTCAAACCTGAGCAACACGGTGTCAGACCCATAAAAGTTAATGTGATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 72 bp | TCGCCAACCCTTTCATTCTCTGCACTGATCGCCTTTTaGATTTCCTGTATTTCCCTTTTCTGGGCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPTLSFSALIAF*ISCISLFWARG Trigger: TCCTCTGGCCCAGAAAAGGGAAATACAGGAAATTCAAAAGGCGATCAGTGCAGAGAATGAAAGGGTTGGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 72 bp | TTGCTTGAGGGCCTGACTCCGACTCTTCTGACGATGTaGGGCTGTTGCAAAATCCACAAAAATTCCACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLEGLTPTLLTM*GCCKIHKNSTN Trigger: GTTTGTGGAATTTTTGTGGATTTTGCAACAGCCTCACATCGTCAGAAGAGTCGGAGTCAGGCCCTCAAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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| CDS TCA 72 bp | GAGAACCCCAGTCTCGTCCAGGGAAGCAATATGAAATaGCAAGCCTGCCATTTCTTCTTGAGTAGAAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ENPSLVQGSNMK*QACHFFLSRKG Trigger: CCCTTTTCTACTCAAGAAGAAATGGCAGGCTTGTCATTTCATATTGCTTCCCTGGACGAGACTGGGGTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS TCA 72 bp | TCCCATGTCGGTGCCGACAACAAAGTGATTAGGATCTaGAGGCAGGAATTTGACACTCAGTGTTTGTGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SHVGADNKVIRI*RQEFDTQCLCR Trigger: TCGACACAAACACTGAGTGTCAAATTCCTGCCTTCAGATCCTAATCACTTTGTTGTCGGCACCGACATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CAA 72 bp | GTCAATCACATTAACTTTTATGGGTCTGACACCGTGTaGCTCAGGTTTGAACACCCTGGGAGATACTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VNHINFYGSDTV*LRFEHPGRYSP Trigger: TGGAGAGTATCTCCCAGGGTGTTCAAACCTGAGCAACACGGTGTCAGACCCATAAAAGTTAATGTGATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS TCA 72 bp | TATCTGCTTTTGGTAATTCAACAACCACCCACACATTaGGAACCCCAGTCTCGTCCAGGGAAGCAATATGAA | + |
|
Preference number: 6 (lower is better) Translates to: YLLLVIQQPPTH*EPQSRPGKQYE Trigger: TTCATATTGCTTCCCTGGACGAGACTGGGGTTCTCAATGTGTGGGTGGTTGTTGAATTACCAAAAGCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS GCA 72 bp | TCAATCACATTAACTTTTATGGGTCTGACACCGTGTTaGTCAGGTTTGAACACCCTGGGAGATACTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SITLTFMGLTPC*SGLNTLGDTLQ Trigger: TTGGAGAGTATCTCCCAGGGTGTTCAAACCTGAGCAACACGGTGTCAGACCCATAAAAGTTAATGTGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CCA 72 bp | AGAAACAATTGCTCAGTCTCACATAATGGTGGATCCTaGAGTCTTCTCTTAAGTCCCATACAACCACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RNNCSVSHNGGS*SLLLSPIQPQS Trigger: GCTCTGTGGTTGTATGGGACTTAAGAGAAGACTCCAGGATCCACCATTATGTGAGACTGAGCAATTGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CAA 72 bp | AGTTCTTCGGCCTTTTCTCTAGCTTCATGCTCATTATaGCTGTCATCGTCTCCATCGCAAACCTCAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSAFSLASCSL*LSSSPSQTSKS Trigger: TGACTTTGAGGTTTGCGATGGAGACGATGACAGCAATAATGAGCATGAAGCTAGAGAAAAGGCCGAAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS CAA 72 bp | CTGTTACCCAACTGGATTACAGTACTGTGTACCAACTaGATCCTTCCTCCAGGTATCAGACCTAAATCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LLPNWITVLCTN*ILPPGIRPKSL Trigger: GAGTGATTTAGGTCTGATACCTGGAGGAAGGATCAAGTTGGTACACAGTACTGTAATCCAGTTGGGTAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS TCA 72 bp | AGTGTTTGTGTCGACCCCCACAGTTCACTATCTTTATaGGAAAGACTGTTACCCAACTGGATTACAGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: SVCVDPHSSLSL*ERLLPNWITVL Trigger: CAGTACTGTAATCCAGTTGGGTAACAGTCTTTCTCATAAAGATAGTGAACTGTGGGGGTCGACACAAACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
||
| CDS TCA 72 bp | TCAAAGATAACTCGCCAACCCTTTCATTCTCTGCACTaGTCGCCTTTTGAATTTCCTGTATTTCCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SKITRQPFHSLH*SPFEFPVFPFS Trigger: AGAAAAGGGAAATACAGGAAATTCAAAAGGCGATCAGTGCAGAGAATGAAAGGGTTGGCGAGTTATCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039349.8 |
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