Pregenerated sensors for DYNC1I2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027012Ensembl transcript IDs: ENSMUST00000081710.12, ENSMUST00000100028.10, ENSMUST00000112136.2, ENSMUST00000112138.8, ENSMUST00000112139.8, ENSMUST00000112140.8, ENSMUST00000112142.8, ENSMUST00000112144.9
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATATATTCCTATACACTTaGACAGGAAGAACACCACTG | + |
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Preference number: 2 (lower is better) Translates to: IEKGNGINMKLTTGRRRHIFLYT*TGRTPL Trigger: CAGTGGTGTTCTTCCTGTCCAAGTGTATAGGAATAT...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| 3UTR-3UTR CCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATCGGAATAAGGAATTGTaGCTACTTAGAAATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: IEKGNGINMKLTTGRRRHRNKEL*LLRNMQ Trigger: CTGCATATTTCTAAGTAGCCACAATTCCTTATTCCG...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| 3UTR TCA 72 bp | ACCATAGAACTATCGAGAAGGGAAATGGCATCAACATaGAACTTACAACAGGTAGGCGACGGCATGCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: TIELSRREMAST*NLQQVGDGMRG Trigger: TCCCCGCATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGATAGTTCTATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| 3UTR-3UTR CAA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATAATATTCCTATACACTaGGACAGGAAGAACACCACT | + |
|
Preference number: 3 (lower is better) Translates to: IEKGNGINMKLTTGRRRHNIPIH*DRKNTT Trigger: AGTGGTGTTCTTCCTGTCCAAGTGTATAGGAATATT...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATGGCAATTTCTCTTCCTaGGTGGGTCCATCTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHGNFSS*VGPSHT Trigger: CGTGTGAGATGGACCCACTCAGGAAGAGAAATTGCC...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATGCTGTAACCGGGGTCTaGGTTTCCTTTGTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHAVTGV*VSFVYV Trigger: CACATACACAAAGGAAACTCAGACCCCGGTTACAGC...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGCAGCTTCACTTGGCGTaGTCACCGACTTGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMQLHLA*SPTWRM Trigger: CATCCTCCAAGTCGGTGAGCACGCCAAGTGAAGCTG...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATCTCCATGCTATCCTGTaGATGGGAAAGCATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHLHAIL*MGKHVQ Trigger: TTGGACATGCTTTCCCATCCACAGGATAGCATGGAG...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATTCTTCTTTTCTTCTCTaGTTTGGGCCAACCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHSSFLL*FGPTVA Trigger: AGCAACGGTTGGCCCAAATCAGAGAAGAAAAGAAGA...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGGGCAATTTCTCTTCCTaGGTGGGTCCATCTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMGNFSS*VGPSHT Trigger: CGTGTGAGATGGACCCACTCAGGAAGAGAAATTGCC...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATGTGAAGCTGAAGAACTaGTGGATCTGTATCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHVKLKN*WICIPM Trigger: CATTGGGATACAGATCCATCAGTTCTTCAGCTTCAC...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112136.2 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGCAGCTTCACTTGGCGTaGTCACCGACTTGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQQLHLA*SPTWRM Trigger: CATCCTCCAAGTCGGTGAGCACGCCAAGTGAAGCTG...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGGGATCTGTATCCCAATaGAGCGTCCTAGATCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMGSVSQ*SVLDPT Trigger: CGTGGGATCTAGGACGCTGCATTGGGATACAGATCC...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112136.2 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATGACATTACAGCTGACTaGCAGTGGAACACATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHDITAD*QWNTYS Trigger: AGAGTATGTGTTCCACTGCCAGTCAGCTGTAATGTC...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATATTTCTCTTCCTGAGTaGGTCCATCTCACACGGTTA | + |
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Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHISLPE*VHLTRL Trigger: TAACCGTGTGAGATGGACCCACTCAGGAAGAGAAAT...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATTTCTGGATACTGGGATaGCCAATCCAAACAACTAAC | + |
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Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHFWILG*PIQTTN Trigger: GTTAGTTGTTTGGATTGGTCATCCCAGTATCCAGAA...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGGGCAATTTCTCTTCCTaGGTGGGTCCATCTCACACG | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQGNFSS*VGPSHT Trigger: CGTGTGAGATGGACCCACTCAGGAAGAGAAATTGCC...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATGTTTGCGTTAATTTCTaGGAGTGTTCGGCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHVCVNF*ECSAKS Trigger: AGATTTGGCCGAACACTCGCAGAAATTAACGCAAAC...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGGGATCTGTATCCCAATaGAGCGTCCTAGATCCCACG | + |
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Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQGSVSQ*SVLDPT Trigger: CGTGGGATCTAGGACGCTGCATTGGGATACAGATCC...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATAGAAATGCTGGCAGTTaGTACCTCTGTGTCATTGTT | + |
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Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHRNAGS*YLCVIV Trigger: AACAATGACACAGAGGTACCAACTGCCAGCATTTCT...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGGCTGTAACCGGGGTCTaGGTTTCCTTTGTGTATGTG | + |
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Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQAVTGV*VSFVYV Trigger: CACATACACAAAGGAAACTCAGACCCCGGTTACAGC...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGCTTCACTTGGCGTaGTCACCGACTTGGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFQLHLA*SPTWRM Trigger: CATCCTCCAAGTCGGTGAGCACGCCAAGTGAAGCTG...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATTTTTCTTCTCTGATTTaGGCCAACCGTTGCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: IEKGNGINMKLTTGRRRHFSSLI*ANRCFL Trigger: TAAGAAGCAACGGTTGGCCCAAATCAGAGAAGAAAA...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGTCTTCTTTTCTTCTCTaGTTTGGGCCAACCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMSSFLL*FGPTVA Trigger: AGCAACGGTTGGCCCAAATCAGAGAAGAAAAGAAGA...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGGGGGGAAAGTCAACTTaGGTAATTTTGGCCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMGGKST*VILAIP Trigger: TGGAATGGCCAAAATTACTCAAGTTGACTTTCCCCC...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTGGCAATTTCTCTTCCTaGGTGGGTCCATCTCACACG | + |
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Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFGNFSS*VGPSHT Trigger: CGTGTGAGATGGACCCACTCAGGAAGAGAAATTGCC...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGAGGAGGTTTAGGAGTTaGTACATCATCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMRRFRS*YIIFLL Trigger: GAGGAGGAAGATGATGTAGCAACTCCTAAACCTCCT...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGGACATTACAGCTGACTaGCAGTGGAACACATACTCT | + |
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Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMDITAD*QWNTYS Trigger: AGAGTATGTGTTCCACTGCCAGTCAGCTGTAATGTC...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGCTCCATGCTATCCTGTaGATGGGAAAGCATGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQLHAIL*MGKHVQ Trigger: TTGGACATGCTTTCCCATCCACAGGATAGCATGGAG...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGATTTCTCTTCCTGAGTaGGTCCATCTCACACGGTTA | + |
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Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMISLPE*VHLTRL Trigger: TAACCGTGTGAGATGGACCCACTCAGGAAGAGAAAT...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGTCTTCTTTTCTTCTCTaGTTTGGGCCAACCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQSSFLL*FGPTVA Trigger: AGCAACGGTTGGCCCAAATCAGAGAAGAAAAGAAGA...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTGCTGTAACCGGGGTCTaGGTTTCCTTTGTGTATGTG | + |
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Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFAVTGV*VSFVYV Trigger: CACATACACAAAGGAAACTCAGACCCCGGTTACAGC...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGTTCTGGATACTGGGATaGCCAATCCAAACAACTAAC | + |
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Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMFWILG*PIQTTN Trigger: GTTAGTTGTTTGGATTGGTCATCCCAGTATCCAGAA...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR TCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGGTGAAGCTGAAGAACTaGTGGATCTGTATCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQVKLKN*WICIPM Trigger: CATTGGGATACAGATCCATCAGTTCTTCAGCTTCAC...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGAGGAGGTTTAGGAGTTaGTACATCATCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQRRFRS*YIIFLL Trigger: GAGGAGGAAGATGATGTAGCAACTCCTAAACCTCCT...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR GCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGTATGAACCAACTCCATaGTATCCTGTGGATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMYEPTP*YPVDGK Trigger: TTTCCCATCCACAGGATAGCATGGAGTTGGTTCATA...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGGACATTACAGCTGACTaGCAGTGGAACACATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQDITAD*QWNTYS Trigger: AGAGTATGTGTTCCACTGCCAGTCAGCTGTAATGTC...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGAGAAATGCTGGCAGTTaGTACCTCTGTGTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMRNAGS*YLCVIV Trigger: AACAATGACACAGAGGTACCAACTGCCAGCATTTCT...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR GCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGTATGAACCAACTCCATaGTATCCTGTGGATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQYEPTP*YPVDGK Trigger: TTTCCCATCCACAGGATAGCATGGAGTTGGTTCATA...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR GCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGGTTTGCGTTAATTTCTaGGAGTGTTCGGCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQVCVNF*ECSAKS Trigger: AGATTTGGCCGAACACTCGCAGAAATTAACGCAAAC...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGTTTTCTTCTCTGATTTaGGCCAACCGTTGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HGGMYLVRNKELWLLRNMFSSLI*ANRCFL Trigger: TAAGAAGCAACGGTTGGCCCAAATCAGAGAAGAAAA...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCTCCATGCTATCCTGTaGATGGGAAAGCATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFLHAIL*MGKHVQ Trigger: TTGGACATGCTTTCCCATCCACAGGATAGCATGGAG...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGAGAAATGCTGGCAGTTaGTACCTCTGTGTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQRNAGS*YLCVIV Trigger: AACAATGACACAGAGGTACCAACTGCCAGCATTTCT...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR TCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTTCTTCTTTTCTTCTCTaGTTTGGGCCAACCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFSSFLL*FGPTVA Trigger: AGCAACGGTTGGCCCAAATCAGAGAAGAAAAGAAGA...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR TCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTGTGAAGCTGAAGAACTaGTGGATCTGTATCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFVKLKN*WICIPM Trigger: CATTGGGATACAGATCCATCAGTTCTTCAGCTTCAC...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGTTTTCTTCTCTGATTTaGGCCAACCGTTGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: EIYLIIFAKFAKATAAFQFSSLI*ANRCFL Trigger: TAAGAAGCAACGGTTGGCCCAAATCAGAGAAGAAAA...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTGACATTACAGCTGACTaGCAGTGGAACACATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFDITAD*QWNTYS Trigger: AGAGTATGTGTTCCACTGCCAGTCAGCTGTAATGTC...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTATTTCTCTTCCTGAGTaGGTCCATCTCACACGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFISLPE*VHLTRL Trigger: TAACCGTGTGAGATGGACCCACTCAGGAAGAGAAAT...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR TCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTTTCTGGATACTGGGATaGCCAATCCAAACAACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFFWILG*PIQTTN Trigger: GTTAGTTGTTTGGATTGGTCATCCCAGTATCCAGAA...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR GCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTTATGAACCAACTCCATaGTATCCTGTGGATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFYEPTP*YPVDGK Trigger: TTTCCCATCCACAGGATAGCATGGAGTTGGTTCATA...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR GCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTGTTTGCGTTAATTTCTaGGAGTGTTCGGCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFVCVNF*ECSAKS Trigger: AGATTTGGCCGAACACTCGCAGAAATTAACGCAAAC...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTAGAAATGCTGGCAGTTaGTACCTCTGTGTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFRNAGS*YLCVIV Trigger: AACAATGACACAGAGGTACCAACTGCCAGCATTTCT...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTTTTTCTTCTCTGATTTaGGCCAACCGTTGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFFSSLI*ANRCFL Trigger: TAAGAAGCAACGGTTGGCCCAAATCAGAGAAGAAAA...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 37% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CCA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTAGTAATTCTGGATACTaGGATGACCAATCCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FEIYLIIFAKFAKATAAFSNSGY*DDQSKQ Trigger: TTGTTTGGATTGGTCATCCCAGTATCCAGAATTACT...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATCTCATCTTCTTTGGGTaGAGCTGTAACCGGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IEKGNGINMKLTTGRRRHLIFFG*SCNRGL Trigger: CAGACCCCGGTTACAGCTCAACCCAAAGAAGATGAG...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CAA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATCAGCTTAGCACCTGCTaGAATCTCCCCTTCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IEKGNGINMKLTTGRRRHQLSTC*NLPFFV Trigger: GACAAAGAAGGGGAGATTCAAGCAGGTGCTAAGCTG...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CAA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATCAGAAATGCTGGCAGTaGGTACCTCTGTGTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: IEKGNGINMKLTTGRRRHQKCWQ*VPLCHC Trigger: ACAATGACACAGAGGTACCAACTGCCAGCATTTCTG...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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| CDS-3UTR CAA 90 bp | ATCGAGAAGGGAAATGGCATCAACATGAAACTTACAACAGGTAGGCGACGGCATAAGATCAGACTCTTCTaGTACAGAAACAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IEKGNGINMKLTTGRRRHKIRLF*YRNSSF Trigger: GAAGCTGCTGTTTCTGTACAAGAAGAGTCTGATCTT...ATGCCGTCGCCTACCTGTTGTAAGTTTCATGTTGATGCCATTTCCCTTCTCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGCTCATCTTCTTTGGGTaGAGCTGTAACCGGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EIYLIIFAKFAKATAAFQLIFFG*SCNRGL Trigger: CAGACCCCGGTTACAGCTCAACCCAAAGAAGATGAG...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGCAGCTTAGCACCTGCTaGAATCTCCCCTTCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HGGMYLVRNKELWLLRNMQLSTC*NLPFFV Trigger: GACAAAGAAGGGGAGATTCAAGCAGGTGCTAAGCTG...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGCAGCTTAGCACCTGCTaGAATCTCCCCTTCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EIYLIIFAKFAKATAAFQQLSTC*NLPFFV Trigger: GACAAAGAAGGGGAGATTCAAGCAGGTGCTAAGCTG...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGCAGAAATGCTGGCAGTaGGTACCTCTGTGTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: HGGMYLVRNKELWLLRNMQKCWQ*VPLCHC Trigger: ACAATGACACAGAGGTACCAACTGCCAGCATTTCTG...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGAGGGGGAAAGTCAACTaGAGTAATTTTGGCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: HGGMYLVRNKELWLLRNMRGKVN*SNFGHS Trigger: GGAATGGCCAAAATTACTCAAGTTGACTTTCCCCCT...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCTCATCTTCTTTGGGTaGAGCTGTAACCGGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FEIYLIIFAKFAKATAAFLIFFG*SCNRGL Trigger: CAGACCCCGGTTACAGCTCAACCCAAAGAAGATGAG...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | GAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGCAGAAATGCTGGCAGTaGGTACCTCTGTGTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: EIYLIIFAKFAKATAAFQQKCWQ*VPLCHC Trigger: ACAATGACACAGAGGTACCAACTGCCAGCATTTCTG...CTGAAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | CACGGAGGTATGTACTTAGTGCGGAATAAGGAATTGTGGCTACTTAGAAATATGAAGATCAGACTCTTCTaGTACAGAAACAGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HGGMYLVRNKELWLLRNMKIRLF*YRNSSF Trigger: GAAGCTGCTGTTTCTGTACAAGAAGAGTCTGATCTT...CATATTTCTAAGTAGCCACAATTCCTTATTCCGCACTAAGTACATACCTCCGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000081710.12 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTCAGAAATGCTGGCAGTaGGTACCTCTGTGTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: FEIYLIIFAKFAKATAAFQKCWQ*VPLCHC Trigger: ACAATGACACAGAGGTACCAACTGCCAGCATTTCTG...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTAGGGGGAAAGTCAACTaGAGTAATTTTGGCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FEIYLIIFAKFAKATAAFRGKVN*SNFGHS Trigger: GGAATGGCCAAAATTACTCAAGTTGACTTTCCCCCT...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
||
| CDS-3UTR CAA 90 bp | TTTGAGATCTACTTAATCATTTTTGCCAAATTTGCTAAGGCTACAGCCGCTTTTAAGATCAGACTCTTCTaGTACAGAAACAGCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FEIYLIIFAKFAKATAAFKIRLF*YRNSSF Trigger: GAAGCTGCTGTTTCTGTACAAGAAGAGTCTGATCTT...AAAAGCGGCTGTAGCCTTAGCAAATTTGGCAAAAATGATTAAGTAGATCTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000081710.12 ENSMUST00000100028.10 ENSMUST00000112136.2 ENSMUST00000112138.8 ENSMUST00000112139.8 ENSMUST00000112140.8 ENSMUST00000112142.8 ENSMUST00000112144.9 |
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