RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYNC1H1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018707

Ensembl transcript IDs: ENSMUST00000018851.14, ENSMUST00000167395.2

Found 1019 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATaGAGGTTAAATATTGGGAGTTTCCTATTCCAGAAAGAGGACTGG +
Preference number: 1 (lower is better)
Translates to: TCFPVHQPFHTVKDE*RLNIGSFLFQKEDW
Trigger: CCAGTCCTCTTTCTGGAATAGGAAACTCCCAATATTTAACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
3UTR-3UTR TCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCACCGTTAAGGATGAATaGAGGTTAAATATTGGGAGT +
Preference number: 2 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLTVKDE*RLNIGS
Trigger: ACTCCCAATATTTAACCTTCATTCATCCTTAACGGT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
3UTR TCA 72 bp CCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATaGAGGTTAAATATTGGGAGTTTCCTATTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: PVHQPFHTVKDE*RLNIGSFLFQK
Trigger: TTTCTGGAATAGGAAACTCCCAATATTTAACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCGGCAGGCAGAGAGCTaGCCTGCCAGCGGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLRQAES*PASGGV
Trigger: AACGCCTCCGCTGGCAGGCCAGCTCTCTGCCTGCCG...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTGGCCGCCCTGTCCTTaGGCCCCTCTGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSWPPCP*APLRTG
Trigger: ACCCGTCCTCAGAGGGGCTCAAGGACAGGGCGGCCA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGAGAGGCGCTGTGTGTaGTCGGTGGCACCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPERRCV*SVAPFR
Trigger: CCTGAAGGGTGCCACCGATCACACACAGCGCCTCTC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACAGCCATGAGGGTGTCTaGGCGTCAGGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSHEGV*ASGSSS
Trigger: GGAGCTGCTGCCTGACGCCCAGACACCCTCATGGCT...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTGCTGGGATACAGCTaGGAGCATCCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPLLGYS*EHPLLQ
Trigger: CTGGAGGAGCGGATGCTCTCAGCTGTATCCCAGCAG...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACGCGCAAGAACCTGTGTaGGAGGGGCTTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNAQEPV*EGLSPR
Trigger: CCTGGGAGAAAGCCCCTCTCACACAGGTTCTTGCGC...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACCCTGGGCCTCAGAGATaGGGACAGCGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHPGPQR*GQRTPP
Trigger: AGGAGGAGTACGCTGTCCTCATCTCTGAGGCCCAGG...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACTGCCCACAATGTGGGTaGGGTCGAGAGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNCPQCG*GREAAP
Trigger: TGGAGCAGCCTCTCGACCTCACCCACATTGTGGGCA...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACGCAGTCCGGAAGCCCTaGGAGTACAGCATGACCTGG +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHAVRKP*EYSMTW
Trigger: CCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGC...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACAGGCGGTGGATGGCCTaGCCAATGGGAGTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHRRWMA*PMGVVG
Trigger: GCCTACAACTCCCATTGGGCAGGCCATCCACCGCCT...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACAATCTGAGGCACCTTaGCCTGCCACGGCGACCACT +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPQSEAP*PATATT
Trigger: AGTGGTCGCCGTGGCAGGCCAAGGTGCCTCAGATTG...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACAGGCCCGGAGAGCACTaGAGAGTGTCATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNRPGEH*RVSWSC
Trigger: GCAAGACCATGACACTCTTCAGTGCTCTCCGGGCCT...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGGTCCTTGAGCCCCTCTaGGGACGGGTTCATGGTGAA +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLVLEPL*GRVHGE
Trigger: TTCACCATGAACCCGTCCTCAGAGGGGCTCAAGGAC...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACATCACCCACCTGCCTaGCTTCACGGCGGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPHHPPA*LHGGVD
Trigger: ATCAACACCGCCGTGAAGTCAGGCAGGTGGGTGATG...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTTACGCAGGTGCTTCTaGAGCACCGCCACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVLRRCF*STATSA
Trigger: GGCGGACGTGGCGGTGCTGCAGAAGCACCTGCGTAA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGGCCATCTCGCCTTGTaGCACCAGCAGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPGHLAL*HQQHIL
Trigger: AAGGATGTGCTGCTGGTGGCACAAGGCGAGATGGCC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTCAGGTGCATCTGCTaGTCCTCCAACTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHFRCIC*SSNSLR
Trigger: GCGCAGCGAGTTGGAGGAGCAGCAGATGCACCTGAA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGAGTACAGCATGACCTaGGCGATCAGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPEYSMT*AISCRS
Trigger: TGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCATTGGGGTCAATTATGTaGGCCACGCCCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPLGSIM*ATPSTP
Trigger: GGGTGTGGAGGGCGTGGCCCACATAATTGACCCCAA...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAAGGCCTGGTGCAGCATaGAGAAGAGCGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPRPGAA*RRASPG
Trigger: GCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACCTGCACGTGGCCCCTTaGAGCTTCAGACCTGTGACT +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHLHVAP*SFRPVT
Trigger: AGTCACAGGTCTGAAGCTCCAAGGGGCCACGTGCAG...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCCAAGGTTGCGCTGCTaGACCTTCCTCGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRPRLRC*TFLAQS
Trigger: TGACTGGGCGAGGAAGGTTCAGCAGCGCAACCTTGG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTTGCCACCTGTTGCTaGATGGCAGAGTCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHFATCC*MAESFR
Trigger: GCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCCTGCGAGTACAGCATaGCCTGGGCGATCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSPASTA*PGRSAA
Trigger: GGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGG...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCGTCAGACAGGAGGCTaGAGAGCAGCGGGATATCTT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNRQTGG*RAAGYL
Trigger: AAGATATCCCGCTGCTCTTCAGCCTCCTGTCTGACG...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGGATCACCTGGCTGGTaGACCACTTGTAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPGSPGW*TTCRAP
Trigger: AGGAGCTCTACAAGTGGTTCACCAGCCAGGTGATCC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGGAGCTTCAGACCTGTaGCTCCAAAGCTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPGASDL*LQSCRH
Trigger: ATGCCTGCAGCTTTGGAGTCACAGGTCTGAAGCTCC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAACCAGCTTACGCAGGTaGTTCTGCAGCACCGCCACG +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPTSLRR*FCSTAT
Trigger: CGTGGCGGTGCTGCAGAAGCACCTGCGTAAGCTGGT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCGGTCTGACAGGAACTTaGGCATCTGCTCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVGLTGT*ASAPGR
Trigger: GCGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACC...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTTGGCATTCTTGGCCGTaGCGAGCTGATCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRWHSWP*RADLGG
Trigger: GCCTCCGAGATCAGCTCGGCACGGCCAAGAATGCCA...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACGGAATGCTCCCGCAGTaGCTCTTGTATGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNGMLPQ*LLYALH
Trigger: GTGCAGTGCATACAAGAGGCACTGCGGGAGCATTCC...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACCTTGTCATTGGCCGCTaGGTTCTTGACCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHLVIGR*VLDLQL
Trigger: GAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAG...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGGACTGCTGTGACCTGTaGCCTCAGGACCCTGACAAT +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLDCCDL*PQDPDN
Trigger: ATTGTCAGGGTCCTGAGGCCACAGGTCACAGCAGTC...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACCTCCTCAATGGCGTTaGCGTCGGCAGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPPPQWR*RRQHQR
Trigger: TCTTTGATGCTGCCGACGCCAACGCCATTGAGGAGG...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATCCAGCAGGTCCAAATaGGGAGCCCCCAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPSSRSK*GAPKPG
Trigger: GCCAGGCTTGGGGGCTCCCCATTTGGACCTGCTGGA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTACGTTGCGGCAGGCCTaGTGCAGCATGGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRTLRQA*CSMEKS
Trigger: GCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGT...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCAGGAGGGTTGGCCATaGACCTCACCTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSQEGWP*TSPPPG
Trigger: ACCTGGTGGAGGTGAGGTCCATGGCCAACCCTCCTG...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTCTGCTTCCAGTCCGTaGTGCTCTCACCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSASSP*CSHQAA
Trigger: TGCTGCTTGGTGAGAGCACCACGGACTGGAAGCAGA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCATCAGGAGCAGGCGGTaGATGGCCTGCCCAATGGGA +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVIRSRR*MACPMG
Trigger: TCCCATTGGGCAGGCCATCCACCGCCTGCTCCTGAT...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCGCCAGTTGGACGCCGTaGTGTGCAGTGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVASWTP*CAVSSS
Trigger: GGATGAGGACACTGCACACCACGGCGTCCAACTGGC...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCATTCTCAGCACGTGTGTaGAGAGTCCGTCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPFSARV*RVRLST
Trigger: AGTGGACAGACGGACTCTTCACACACGTGCTGAGAA...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCAGGACGGGTTCATGGTaGAGACCACGTGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSRTGSW*RPRAGC
Trigger: GCAACCTGCACGTGGTCTTCACCATGAACCCGTCCT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGGTAGTGCCGAGGTGTaGTGGCCATCGTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPGSAEV*WPSFCH
Trigger: GTGGCAGAACGATGGCCATCACACCTCGGCACTACC...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACGGTGCCTTTCAGCTTaGTCCTCGCTAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPRCLSA*SSLAAW
Trigger: CCATGCTGCTAGCGAGGATCAAGCTGAAAGGCACCG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGACTTCACGGCGGTGTTaGTGGCCTTATCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLTSRRC*WPYLLG
Trigger: ACCAAGCAGATAAGGCCATCAACACCGCCGTGAAGT...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCCTCTCGCTGAAATCTaGCACCCACTGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNPLAEI*HPLDHS
Trigger: ACTGTGATCCAGTGGGTGTCAGATTTCAGCGAGAGG...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAACTGTCTGGTGGCAGTaGTGTAGGCCTCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPTVWWQ*CRPQVQ
Trigger: TTGTACCTGAGGCCTACATCACTGCCACCAGACAGT...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGAGGAACTTGCGCATCTaGTCCAGGGCGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQRNLRI*SRALFS
Trigger: GGAGAAGAGCGCCCTGGAGCAGATGCGCAAGTTCCT...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGAGGACCGTGTGGACCTaGGGGTCTGACAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQRTVWT*GSDRNL
Trigger: CAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCT...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAGCTGTGTCAACGGAGTaGTGCTCCAGCTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPAVSTE*CSSSWR
Trigger: TCGCCAAGAGCTGGAGCAGCACTCCGTTGACACAGC...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACTGTATGCACTGCACCTaGTGGGATACAGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNCMHCT*WDTAES
Trigger: GCTCTCAGCTGTATCCCAGCAGGTGCAGTGCATACA...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATTGCGGCAGGCCTGGTaGAGCATGGAGAAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPLRQAW*SMEKSE
Trigger: CTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGCAATAGACGTGATCTaGGTGTTCTGCTCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPAIDVI*VFCSAA
Trigger: CGCAGCAGAGCAGAACACGCAGATCACGTCTATTGC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCAAGCAGGCGTGGGGCTaGAGGGAGTGCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSKQAWG*RECSFF
Trigger: GAAGAAGCTGCACTCCCTGCAGCCCCACGCCTGCTT...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATCCGGTGAGATGTTCTaGCGGCCCTTGGCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPSGEMF*RPLAVS
Trigger: CGACACAGCCAAGGGCCGGCAGAACATCTCACCGGA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCATGGATCAGCTGGGTCTaGTATTCACGAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPWISWV*YSRMAP
Trigger: AGGGGCCATTCGTGAATACCAGACCCAGCTGATCCA...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTGTCCAAGAAGAACCTaGGTCCAAGCTCGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHCPRRT*VQARRP
Trigger: TGGCCTTCGAGCTTGGACCCAGGTTCTTCTTGGACA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATCTGGCTCTGGATCCTaGGCAGGGACAGCACAACCA +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPSGSGS*AGTAQP
Trigger: TGGTTGTGCTGTCCCTGCCCAGGATCCAGAGCCAGA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCCCACGCGCCCACTTaGCAAAGCCCCACAAAGATA +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPPHAPT*QSPTKI
Trigger: TATCTTTGTGGGGCTTTGCCAAGTGGGCGCGTGGGG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTGGCACGACGACATCTaGGGCTGCCACCTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSWHDDI*GCHLVC
Trigger: ACACACAAGGTGGCAGCCCCAGATGTCGTCGTGCCA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTGCTGCTGCAGGCAGTaGACAGCGGCAGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSCCCRQ*TAAGTA
Trigger: AGCAGTACCTGCCGCTGTCCACTGCCTGCAGCAGCA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACTGGCACCCTTCAGGTTaGGGTTCTCATACAGCACGT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNWHPSG*GSHTAR
Trigger: ACGTGCTGTATGAGAACCCCAACCTGAAGGGTGCCA...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATCAGGCCCTGGATTTTaGGGGTGGAGCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPSGPGF*GWSQHS
Trigger: TGAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACGTGTTGAGCAGACGCTaGTCGAACTCATTGTCCACC +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNVLSRR*SNSLST
Trigger: GGTGGACAATGAGTTCGACCAGCGTCTGCTCAACAC...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCAGTCTTCACTCAGAGTaGGGACTCGGAGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSSLHSE*GLGAGT
Trigger: CGTCCCAGCTCCGAGTCCTCACTCTGAGTGAAGACT...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCTCGGAGGCGGGCGGTaGTGCGGGTCTCCACACGGT +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSLGGGR*CGSPHG
Trigger: ACCGTGTGGAGACCCGCATCACCGCCCGCCTCCGAG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAGGAAGCCAAGCCACTTaGGGTTCCGGACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPGSQAT*GSGLLW
Trigger: CCAAAGAAGTCCGGAACCTCAAGTGGCTTGGCTTCC...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCCATGTCCAGCTTGTTaGCCCAGATGGGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQPCPAC*PRWADW
Trigger: CCAATCTGCCCATCTGGGTCAACAAGCTGGACATGG...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACGACCTTAGAAAGCTCTaGCCACACACCTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNDLRKL*PHTFEV
Trigger: GACCTCAAAGGTGTGTGGTCAGAGCTTTCTAAGGTC...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTCCGGAAGAGCTTCTTaGGGTTGTCGGGGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVSGRAS*GCRGGL
Trigger: CAAACCTCCCCGACAACCTCAAGAAGCTCTTCCGGA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGGCTCTTCCCACTTCCTaGAGGCCCAACCATCATCAG +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQALPTS*RPNHHQ
Trigger: CTGATGATGGTTGGGCCTTCAGGAAGTGGGAAGAGC...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACAGCCACTTTCCAAGCTaGACAGGAGCCAAGACAACA +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSHFPS*TGAKTT
Trigger: TGTTGTCTTGGCTCCTGTTCAGCTTGGAAAGTGGCT...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATCAGCACACACCTGTTaGAAAGGGCTGGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPSAHTC*KGLVRW
Trigger: CCACCTCACCAGCCCTTTTCAACAGGTGTGTGCTGA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTGGCTTCCAGGTCCCTaGTCATCTGCTCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSWLPGP*SSAPPH
Trigger: ATGAGGTGGAGCAGATGATCAGGGACCTGGAAGCCA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACTACTGGTACAGGAAGTaGACCTGCTTCAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNYWYRK*TCFKDS
Trigger: GGAGTCCTTGAAGCAGGTTCACTTCCTGTACCAGTA...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGTCTTGGGGTTCAGGTaGTTCTCCTTGGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPVLGFR*FSLVLL
Trigger: CAACAGAACCAAGGAGAAGCACCTGAACCCCAAGAC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTCCTGCTTCAGCTTCTaGCCTTCCACGTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSSCFSF*PSTWFS
Trigger: GGAGAACCACGTGGAAGGGCAGAAGCTGAAGCAGGA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCTTCCCCAGCAGGTCTaGCAACCTTTCCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQLPQQV*QPFQRP
Trigger: AGGTCTCTGGAAAGGTTGGCAGACCTGCTGGGGAAG...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTTTTCGCCTACGCTGTaGCTCGTCCTCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVFSPTL*LVLPFI
Trigger: GATGAAGGGGAGGACGAGGCACAGCGTAGGCGAAAA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTGTCAGGTCCATGATGTaGTCCAGCTTGAAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRVRSMM*SSLKAC
Trigger: GCACGCCTTCAAGCTGGAGCACATCATGGACCTGAC...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTCCAGCTGCTCAATCTaGATGGGGAAATCAGGATGG +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSSCSI*MGKSGW
Trigger: CCATCCTGATTTCCCCATGCAGATTGAGCAGCTGGA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTGCTCCTCCAACTCGCTaGGCTTCTCATGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRAPPTR*ASHGRG
Trigger: ACCTCTTCCATGAGAAGCGCAGCGAGTTGGAGGAGC...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCTTTGCTTCCACAGCTaGCAGGTCTGCCTTGATGGC +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRLCFHS*QVCLDG
Trigger: GCCATCAAGGCAGACCTGGCAGCTGTGGAAGCAAAG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAACGGTCTCCACCTCCTaGATGACAATATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPTVSTS*MTISVS
Trigger: GGAGACAGATATTGTCATGCAGGAGGTGGAGACCGT...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCGTGTTCTGCTCTGCTaGGAGGTCCTCAACATGTCC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVRVLLC*EVLNMS
Trigger: GGACATGTTGAGGACCTCGCAGCAGAGCAGAACACG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTTCGTCGTCCCACGTCTaGAAGACTTCGAAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRSSSHV*KTSKQA
Trigger: GGCTTGCTTCGAAGTCTTCCAGACGTGGGACGACGA...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATCCACGTCCCAGATCTaGCCCAGCGTCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPSTSQI*PSVSSE
Trigger: TTCTGAGCTGACGCTGGGCCAGATCTGGGACGTGGA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTTGTCGTAGTTGGGGTTaGAATGCTCCCGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRCRSWG*NAPAVP
Trigger: AGGCACTGCGGGAGCATTCCAACCCCAACTACGACA...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCTTCTGCCACCAGCTTaGGCACCATTGTCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQLLPPA*APLSRR
Trigger: TCTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAG...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCATGAGCCCCTCCTTCTaGGCCCCCTCTTTGCACTGT +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSMSPSF*APSLHC
Trigger: ACAGTGCAAAGAGGGGGCCCAGAAGGAGGGGCTCAT...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCTGGATTTTGGGGGTaGAGCCAGCACTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPPGFWG*SQHSAQ
Trigger: TTGTGCTGAGTGCTGGCTCCACCCCCAAAATCCAGG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACGGCTTTCACTCCGGGTaGTGGCTCAAACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNGFHSG*WLKHKD
Trigger: ATCTTTGTGTTTGAGCCACCACCCGGAGTGAAAGCC...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACGGAGGACTGTGGAGATaGCATTGGAGAGTGATAGCT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNGGLWR*HWRVIA
Trigger: AGCTATCACTCTCCAATGCCATCTCCACAGTCCTCC...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTGAGCTTGCCACTTGTTaGGATCTTCCCCTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRELATC*DLPLAC
Trigger: ACAGGCTAGGGGAAGATCTCAACAAGTGGCAAGCTC...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACGGCTGCTCCTTCATTTaGTCAATTTGTTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHGCSFI*SICSQT
Trigger: GGTCTGGGAACAAATTGATCAAATGAAGGAGCAGCC...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACGCTCATCACACAGTTTaGAGAACGGGACGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNAHHTV*RTGRSC
Trigger: ACAAGATCGTCCCGTTCTTCAAACTGTGTGATGAGC...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGGGATTTCTTGGCTCATaGCCTTCTTCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLGFLGS*PSSSQP
Trigger: AGGCTGAGAAGAAGAAGGTCATGAGCCAAGAAATCC...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTCTTCAGCATCTTGCTaGTCATGTCCACGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSSSASC*SCPRLG
Trigger: CCCAAGGCGTGGACATGATCAGCAAGATGCTGAAGA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACTGGGCGGACGAACAGTaGATTGAACCTGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNWADEQ*IEPGEN
Trigger: ATTTTCTCCAGGTTCAATGCACTGTTCGTCCGCCCA...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCGCAGGGAAATGGTATTaGGCTCCTCCACCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSAGKWY*APPPSH
Trigger: GTGAGAAGGTGGAGGAGCGCAATACCATTTCCCTGC...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTCTTGTGGTCATACATaGAGGTTTCCAAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSCGHT*RFPRSG
Trigger: TCCGCTCCTTGGAAACCTGCATGTATGACCACAAGA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGGGCATCCTTGTCAGTaGATTCCGATAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPGHPCQ*IPIELL
Trigger: GAGAAGTTCTATCGGAATGCACTGACAAGGATGCCC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCAGCCCAACATTCAGGTaGATCTGCTGCTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVSPTFR*ICCSSN
Trigger: GTTGGAGGAGCAGCAGATGCACCTGAATGTTGGGCT...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACTCCTTGACACTCATCTaGTTGTCTGCGATCACTTCC +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNSLTLI*LSAITS
Trigger: GGAAGTGATCGCAGACAAGCAGATGAGTGTCAAGGA...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACTCACCTCCACCAGGTaGTGCTTCTTGATGGACTTC +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPLTSTR*CFLMDF
Trigger: GAAGTCCATCAAGAAGCAGCACCTGGTGGAGGTGAG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCATCTTCCAGCTTCTaGAGCTCATTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQSSSSF*SSFLRG
Trigger: GCCCCTGAGGAATGAGCTGCAGAAGCTGGAAGATGA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCACAGCTGCCAGGTCTaGCTTGATGGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLHSCQV*LDGLGL
Trigger: GAGGCCCAGGCCATCAAGGCAGACCTGGCAGCTGTG...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTGTGAGGTCGAGAGGCTaGTCCATGATGGACATGAAG +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRVRSRG*SMMDMK
Trigger: CTTCATGTCCATCATGGAGCAGCCTCTCGACCTCAC...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTGATCTGCGTGTTCTaGTCTGCTGCGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPVICVF*SAARSS
Trigger: TGAGGACCTCGCAGCAGAGCAGAACACGCAGATCAC...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAATCTGGATGTCCTTGTaGCCGTCAACCTTGCACGCC +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPIWMSL*PSTLHA
Trigger: GGCGTGCAAGGTTGACGGGCACAAGGACATCCAGAT...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGATAGCTTGTTGTTGCTaGACGTGGCCCCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQIACCC*TWPLGA
Trigger: AGCTCCAAGGGGCCACGTGCAGCAACAACAAGCTAT...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCGTGATAGCTTGTTGTTaGTGCACGTGGCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVVIACC*CTWPLG
Trigger: TCCAAGGGGCCACGTGCAGCAACAACAAGCTATCAC...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCGGTGAAGATGAGGTCTaGCCGGGTGAAGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSGEDEV*PGEVQV
Trigger: TACCTGAACTTCACCCGGGCAGACCTCATCTTCACC...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATCTCATTGGCATTCTTaGCCGTGCCGAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPSHWHS*PCRADL
Trigger: GAGATCAGCTCGGCACGGCCAAGAATGCCAATGAGA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCATCATCGAAGATCTCCTaGGTGTTGAGCTTCATTCGG +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPSSKIS*VLSFIR
Trigger: CCGAATGAAGCTCAACACCCAGGAGATCTTCGATGA...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACAGCGAGATGGCAAATaGGTAGAGCTGGTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPQRDGK*VELVGL
Trigger: CAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACGCGAACATCTCCTaGTACAGCTTGTACCTGCAC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVHANIS*YSLYLH
Trigger: GTGCAGGTACAAGCTGTACCAGGAGATGTTCGCGTG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCCCAATGCTTTCTaGATCTTCCCCAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQSPNAF*IFPSRS
Trigger: AGACCTGCTGGGGAAGATCCAGAAAGCATTGGGGGA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTCCACTCCCTGGTGTTaGGATCCAAGGTTCCGTAGA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSSTPWC*DPRFRR
Trigger: TCTACGGAACCTTGGATCCCAACACCAGGGAGTGGA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACTCAAAGACAATCCACTaGCGTTTCTGCAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNSKTIH*RFCSSP
Trigger: AGGTGAGCTGCAGAAACGCCAGTGGATTGTCTTTGA...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTTCTCCCAGGGTCAGTaGGTGGATTGCAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSFSQGQ*VDCKPQ
Trigger: TTGGGGCTTGCAATCCACCCACTGACCCTGGGAGAA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCAGCGGCAGGTACTGCTaGGACACGGTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLSGRYC*DTVSTS
Trigger: GGAGGTGGAGACCGTGTCCCAGCAGTACCTGCCGCT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAGGACAGGTGTGTTTaGCTTCACCTCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSQDRCV*LHLCAH
Trigger: GTGGGCACAGAGGTGAAGCCAAACACACCTGTCCTG...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCACCCAGGCACACGTaGATGTTCTTCAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVPPRHT*MFFSSL
Trigger: CAAGGAACTGAAGAACATCCACGTGTGCCTGGGTGG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATCCCTTCATATATGGTaGGGGCCTGAAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPSLHIW*GPEEPP
Trigger: AGGAGGCTCTTCAGGCCCTCACCATATATGAAGGGA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATGTCCGCACTGCCTGTaGAGATGCCTTCCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPCPHCL*RCLPSR
Trigger: TCTACTTGGAAGGCATCTTCACAGGCAGTGCGGACA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTCGTGGGAGTCCAGCATaGGCCCCTCCTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGRGSPA*APPSGP
Trigger: GGGCCCAGAAGGAGGGGCTCATGCTGGACTCCCACG...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGGGTCCATCTTACTGGTaGATTCTTTGCCGACTTGAT +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLGPSYW*ILCRLD
Trigger: ATCAAGTCGGCAAAGAATTCACCAGTAAGATGGACC...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATCTCCACCTCCTGCATaGCAATATCTGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPSPPPA*QYLSPP
Trigger: TGGAGGAGACAGATATTGTCATGCAGGAGGTGGAGA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTCTGCGATTAAGGCCTaGACCTCCTTCTTTAGGCCG +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSSAIKA*TSFFRP
Trigger: CGGCCTAAAGAAGGAGGTGCAGGCCTTAATCGCAGA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTGGACCAGGAGAGCTTaGCACTTGTTGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQWTRRA*HLLRSS
Trigger: GGAAGATCTCAACAAGTGGCAAGCTCTCCTGGTCCA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCCTCTTGTATGCACTaGACCTGCTGGGATACAGCT +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPASCMH*TCWDTA
Trigger: AGCTGTATCCCAGCAGGTGCAGTGCATACAAGAGGC...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCATCCAGGGGAATGCTaGGCAGCCTGGCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLHPGEC*AAWPGS
Trigger: ACTTCCTGGCCAGGCTGCGCAGCATTCCCCTGGATG...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCGACGTGAAGTACGGCTaGATGATCGTTGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVDVKYG*MIVAAS
Trigger: AGATGCAGCAACGATCATGCAGCCGTACTTCACGTC...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCACGGAGGGCTTCATGTaGCCAAATACGAATGAGACC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVTEGFM*PNTNET
Trigger: GGTCTCATTCGTATTTGGGCACATGAAGCCCTCCGT...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACCTCCACCAGGTGCTaGTTCTTGATGGACTTCACA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSTSTRC*FLMDFT
Trigger: TGTGAAGTCCATCAAGAAGCAGCACCTGGTGGAGGT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACCTCATTGGCTTTCTaGTGGTTGTCCTTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSTSLAF*WLSLAS
Trigger: TGACGCCAAGGACAACCAGCAGAAAGCCAATGAGGT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTCTTGTCCAGCTCCGTaGCAGACAGCAAGTCATTCA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSSCPAP*QTASHS
Trigger: TGAATGACTTGCTGTCTGCCACGGAGCTGGACAAGA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTCAGGTGCTTCTCCTTaGTTCTGTTGTGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSSGASP*FCCATA
Trigger: AGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGTGTCAAAGGTTCCTCTaGCTTTCCTTATCTGGACCA +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLCQRFL*LSLSGP
Trigger: TGGTCCAGATAAGGAAAGCCAGAGGAACCTTTGACA...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCAGGGAGGCTGGTCCTaGGTAATCCACATATACAAC +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRQGGWS*VIHIYN
Trigger: GTTGTATATGTGGATTACCCAGGACCAGCCTCCCTG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTGCTCCTGGATTTCTTaGCTCATGACCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHCSWIS*LMTFFF
Trigger: GAAGAAGAAGGTCATGAGCCAAGAAATCCAGGAGCA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCGGTTAAAGGCCACCTaGAAGAGGTCCTTGGTTATG +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRRLKAT*KRSLVM
Trigger: CATAACCAAGGACCTCTTCCAGGTGGCCTTTAACCG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATTTCACTCCGGGTGGTaGCTCAAACACAAAGATCCG +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPFHSGW*LKHKDP
Trigger: CGGATCTTTGTGTTTGAGCCACCACCCGGAGTGAAA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCATGTCCTCAGCATGTTaGCTTTCACTCCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSMSSAC*LSLRVV
Trigger: CACCACCCGGAGTGAAAGCCAACATGCTGAGGACAT...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAGTTGTGCGACTGCTGTaGCCTGTGGCCTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPVVRLL*PVASGP
Trigger: GGGTCCTGAGGCCACAGGTCACAGCAGTCGCACAAC...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCTTCATGTAGGCAGTaGGCTGTCTGTCGATCTGTT +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPASCRQ*AVCRSV
Trigger: AACAGATCGACAGACAGCTCACTGCCTACATGAAGC...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCACACCAGGCTTGTGACTaGCTTGTGGAGCATCTGTAT +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPHQACD*LVEHLY
Trigger: ATACAGATGCTCCACAAGTCAGTCACAAGCCTGGTG...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTACGGAGCGAGGGAATaGGCCTCAGCATGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSYGARE*ASAWRG
Trigger: ACCGCGCCATGCTGAGGCTCATTCCCTCGCTCCGTA...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTACGTCCGCCACATTCTaGACCGCCGACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLTSATF*TADTSR
Trigger: CCTGGAGGTGTCGGCGGTGCAGAATGTGGCGGACGT...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTTGCTGATGAAAGAGTaGAGTGTCTCATACGGCGAG +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSLLMKE*SVSYGE
Trigger: CTCGCCGTATGAGACACTGCACTCTTTCATCAGCAA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAATCACCATCCCTGTCTaGTTTGCCAGACTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPITIPV*FARLSD
Trigger: ATCAGAGAGTCTGGCAAAGCAGACAGGGATGGTGAT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTCGGGTACTTCGTGTTaGGGATCTTTCTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVSGTSC*GSFSDV
Trigger: CACATCTGAGAAAGATCCGCAACACGAAGTACCCGA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACACCTTGAACTTGTCGTaGAGAGATTCGATGTCATCT +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNTLNLS*RDSMSS
Trigger: AGATGACATCGAATCTCTGCACGACAAGTTCAAGGT...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTCCCTCTTCACATTaGCTGCACTTACAAGCACAC +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQSPSSH*LHLQAH
Trigger: GTGTGCTTGTAAGTGCAGGCAATGTGAAGAGGGAGA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATGGATCAGAATCTCCTaGTCAGGTAGGTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPWIRIS*SGRFSA
Trigger: TGCTGAGAACCTACCTGAGCAGGAGATTCTGATCCA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCATCCACTGGCGTTTCTaGAGCTCACCTCTCACATTG +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSIHWRF*SSPLTL
Trigger: CAATGTGAGAGGTGAGCTGCAGAAACGCCAGTGGAT...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTTGTACTGCGCCACGTTaGGGCAGGCCTGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLCTAPR*GRPGAA
Trigger: TGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACA...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAAGCTTCTTCTCCAGCTaGATCAGCCAGCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPSFFSS*ISQPGA
Trigger: GGCCCCGGGCTGGCTGATGCAGCTGGAGAAGAAGCT...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTTCCACCAGGACCGTGTaGACCTGCGGGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLSTRTV*TCGSDR
Trigger: CCTGTCAGACCCGCAGGTCCACACGGTCCTGGTGGA...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCGTGAGGACTCGGAGCTaGGACGACACTGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLVRTRS*DDTGLS
Trigger: AGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCAC...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCTTCCGTCCCTTCTTTaGAAACATCCAGACCATCGA +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRLPSLL*KHPDHR
Trigger: TCGATGGTCTGGATGTTTCCAAAGAAGGGACGGAAG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACTCATTTTACAAGCTTaGCTTTGCGGGTACTGGACC +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPLILQA*LCGYWT
Trigger: GGTCCAGTACCCGCAAAGCCAAGCTTGTAAAATGAG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCCCAGATGGGCAGATTaGAATAGGAGTGCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSPRWAD*NRSAGL
Trigger: TAAACCTGCACTCCTATTCCAATCTGCCCATCTGGG...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCCCACCTGGTACCTCTaGCTCTGGATCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLPTWYL*LWILGR
Trigger: CCTGCCCAGGATCCAGAGCCAGAGGTACCAGGTGGG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGGACAATACCACTAGCTaGGCCTGGTATTTATCAATC +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLDNTTS*AWYLSI
Trigger: GATTGATAAATACCAGGCCCAGCTAGTGGTATTGTC...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCATAAGGACCAGAGGATaGCGTAAACCAGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSIRTRG*RKPDSA
Trigger: AGCGCTATCTGGTTTACGCCATCCTCTGGTCCTTAT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTGATACAGTGCTTCAGTaGACCAGTCACCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRDTVLQ*TSHQTS
Trigger: ACTGGTTTGGTGACTGGTCCACTGAAGCACTGTATC...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATTGACCTCCAGCTCTTaGCTCTTGATCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPLTSSS*LLILRS
Trigger: TGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTCATTGGCTTTCTGCTaGTTGTCCTTGGCGTCATCT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSSLAFC*LSLASS
Trigger: AGATGACGCCAAGGACAACCAGCAGAAAGCCAATGA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCGACAGGTCTATGTCTTaGTCACCGAGGGTAATCAGC +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSDRSMS*SPRVIS
Trigger: GCTGATTACCCTCGGTGACCAAGACATAGACCTGTC...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTGGAGCAGGCGGTGGATaGCCTGCCCAATGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSGAGGG*PAQWEL
Trigger: CAACTCCCATTGGGCAGGCCATCCACCGCCTGCTCC...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACTCTCCGAGGTTTGTaGAAACAAACATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSTLRGL*KQTCGP
Trigger: TGGCCCACATGTTTGTTTCCACAAACCTCGGAGAGT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTCTGTTCAAGATCTCTaGGAATGTCTTGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSVQDL*ECLVVI
Trigger: TATGACCACAAGACATTCTCAGAGATCTTGAACAGA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCATCCCAGCCTCGGATaGGGCGGCATTTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLHPSLG*GGICSD
Trigger: ATCAGAACAAATGCCGCCTCATCCGAGGCTGGGATG...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCAAAATCGCATCTGGCTaGGCCATTCGAAAGATTTGG +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSKIASG*AIRKIW
Trigger: CCAAATCTTTCGAATGGCTCAGCCAGATGCGATTTT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAGTTGAAAAGGGCTGGTaGGGTGGCCGCCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPVEKGW*GGRPVL
Trigger: AAGGACAGGGCGGCCACCTCACCAGCCCTTTTCAAC...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAGCAGCATGGCGAAGGTaGTGTGGTCCTGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPAAWRR*CGPGAA
Trigger: TGCTGCACCAGGACCACATCACCTTCGCCATGCTGC...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCGGGTCGGAAGGCTTaGATCAGGAGCAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDESGRKA*IRSRRW
Trigger: CCACCGCCTGCTCCTGATTCAAGCCTTCCGACCCGA...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCAAATTCGTACTTCTTTaGCCACCCCAGTGGAGCATA +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVKFVLL*PPQWSI
Trigger: TATGCTCCACTGGGGTGGTCAAAGAAGTACGAATTT...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACTGAGAACCTCCTTATaGCAGGAGTCATACTTCAAG +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPLRTSL*QESYFK
Trigger: CTTGAAGTATGACTCCTGGCATAAGGAGGTTCTCAG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTGTACGATCTTCATTTaGAGGTTTGCCACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVCTIFI*RFATCC
Trigger: GCAACAGGTGGCAAACCTGCAAATGAAGATCGTACA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGAACATTTTCTTGAAGTaGTTCTGCAACTTAGCCACG +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLNIFLK*FCNLAT
Trigger: CGTGGCTAAGTTGCAGAAGCACTTCAAGAAAATGTT...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCGGAGAGGAGGCTaGTCCATGAGGACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLLRRGG*SMRTES
Trigger: GGACTCTGTCCTCATGGAGCAGCCTCCTCTCCGGAG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAACCTGGGCGATCAGCTaGCGGTCAGGCTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPTWAIS*RSGLVI
Trigger: GATGACCAAGCCTGACCGGCAGCTGATCGCCCAGGT...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCATCCAGGGGAATaGTGCGCAGCCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSLHPGE*CAAWPG
Trigger: TCCTGGCCAGGCTGCGCAGCATTCCCCTGGATGAAG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCTGCATGATCGTTGCTaGATCTCTTTGAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRLHDRC*ISLNLQ
Trigger: CTGCAGATTCAAAGAGATGCAGCAACGATCATGCAG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCGGCTGCATGATCGTTaGTGCATCTCTTTGAATCTG +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSRLHDR*CISLNL
Trigger: CAGATTCAAAGAGATGCAGCAACGATCATGCAGCCG...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATGCTGTTTGTGTAGCTaGTCCTGGATTTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPCCLCS*SWISWL
Trigger: GAGCCAAGAAATCCAGGAGCAGCTACACAAACAGCA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACGTCTGGCCTTTCTaGTTTAAGCACTTCATTGAG +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVHVWPF*FKHFIE
Trigger: CTCAATGAAGTGCTTAAAGCAGAAAGGCCAGACGTG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTGTCGTCATCCAGAATaGGGCCTTTTACCTCATTCA +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSCRHPE*GLLPHS
Trigger: TGAATGAGGTAAAAGGCCGCATTCTGGATGACGACA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGACAGCGGCAGGTACTaGTGGGACACGGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGDSGRY*WDTVST
Trigger: GGTGGAGACCGTGTCCCAGCAGTACCTGCCGCTGTC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCTTGTGAGATGTTCTaGAGCTGTTTGATCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPACEMF*SCLILS
Trigger: CGAGAGGATCAAACAGCTGCAGAACATCTCACAAGC...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTGATCCCGGTCAAGCTTaGTCACCTTTTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRDPGQA*SPFEFL
Trigger: GAGAAATTCAAAAGGTGACCAAGCTTGACCGGGATC...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGGCCCCTCGGATGTGTaGGCGGACGAACAGTGCATT +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLGPSDV*ADEQCI
Trigger: AATGCACTGTTCGTCCGCCCACACATCCGAGGGGCC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATCATCTTTCACACGTTaGATCAGCTGGGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPSSFTR*ISWVWY
Trigger: ATACCAGACCCAGCTGATCCAACGTGTGAAAGATGA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTTTCAATCAGCGAGATaGCAAATGGGTAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVFQSAR*QMGRAG
Trigger: ACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGCTGCCGGTCAGGCTTaGTCATCGCCAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGAAGQA*SSPSSG
Trigger: TCCGGAGCTTGGCGATGACCAAGCCTGACCGGCAGC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCAAGCCCCAACAAACTaGATTCTCTCTAGCTTTACC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVQAPTN*ILSSFT
Trigger: GGTAAAGCTAGAGAGAATCCAGTTTGTTGGGGCTTG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGGCTTCCCGGTGTGTTaGGGGCTGCGGCAGTTTATC +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSGFPVC*GLRQFI
Trigger: GATAAACTGCCGCAGCCCCCAACACACCGGGAAGCC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCAGCTGCAGGAGGGTTaGCCATGGACCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSQLQEG*PWTSPP
Trigger: TGGAGGTGAGGTCCATGGCCAACCCTCCTGCAGCTG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGTTCACGGTTCAGTACTaGATTCAAAACTGGATCGTA +
Preference number: 4 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLFTVQY*IQNWIV
Trigger: TACGATCCAGTTTTGAATCCAGTACTGAACCGTGAA...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGTGGACCTGCGGGTCTaGCAGGAACTTGCGCATCTG +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGVDLRV*QELAHL
Trigger: CAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCAC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTGCAAGGCAGTTCCTaGTGCTGGATCCCGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLLQGSS*CWIPVK
Trigger: CTTGACCGGGATCCAGCATCAGGAACTGCCTTGCAG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCAGTTTAGCCAAAAGCTaGTTTCCTGCAAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSSLAKS*FPARQF
Trigger: GAACTGCCTTGCAGGAAATCAGCTTTTGGCTAAACT...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTATCAGTGTCAAAACTaGCAGTGGCATGGAAACGTT +
Preference number: 4 (lower is better)
Translates to: QPQHLSPANANQPLAFQSYQCQN*QWHGNV
Trigger: AACGTTTCCATGCCACTGTCAGTTTTGACACTGATA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATCCTGTGAGCGGGGTTaGTGCGCCACACCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPSCERG*CATPSS
Trigger: TGAAGATGGTGTGGCGCATCAACCCCGCTCACAGGA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGTCTTTGAGTGCTTCTaGTTTCAGTTCAATTACCAA +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPVFECF*FQFNYQ
Trigger: TTGGTAATTGAACTGAAATCAGAAGCACTCAAAGAC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGTCTCCACTTCAATCTaGGGCACCTTGGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLVSTSI*GTLACH
Trigger: GTGGCAGGCCAAGGTGCCTCAGATTGAAGTGGAGAC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTCCAGCTCTTGGCTCTTaGTCCTCAGGTCACGGCGCA +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGPALGS*SSGHGA
Trigger: TGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGG...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCAGAGGTCCTTGGTTATaGTGGAGAGGCGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLRGPWL*WRGAVC
Trigger: ACACACAGCGCCTCTCCATCATAACCAAGGACCTCT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCAAAGAAAGGAGCCACTaGATTGCTGATGAAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVKERSH*IADERV
Trigger: CACTCTTTCATCAGCAATGCAGTGGCTCCTTTCTTT...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGGTTCTCCCAGCCTTTaGCCAGGACATCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLGSPSL*PGHPPL
Trigger: GAGTGGAGGATGTCCTGGGCAAAGGCTGGGAGAACC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCAAGCTGTCTCCATCCTaGTTCAGCTTCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLKLSPS*FSFCPS
Trigger: GGAAGGGCAGAAGCTGAAGCAGGATGGAGACAGCTT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACAAACCTTAACATACTaGTCAACTTCAGTCACTATG +
Preference number: 4 (lower is better)
Translates to: PSHRLQPQHLSPANANQPQTLTY*STSVTM
Trigger: CATAGTGACTGAAGTTGAGCAGTATGTTAAGGTTTG...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCGAGACGCTGTTGATATaGTCCTTGACCTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSETLLI*SLTLLK
Trigger: CTTCAACAAGGTCAAGGAGCATATCAACAGCGTCTC...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTTCTTGAAGTGCTTCTaGAACTTAGCCACGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQFLKCF*NLATFL
Trigger: CAAGAACGTGGCTAAGTTGCAGAAGCACTTCAAGAA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTGGTTGGCATTGTACTaGGCCACGTTGCGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGWLALY*ATLRQA
Trigger: GGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTTCTTCTCAGCCTCTTaGTGGTCTTTCACCATTTTC +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQFFSAS*WSFTIF
Trigger: GAAAATGGTGAAAGACCAGCAAGAGGCTGAGAAGAA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTGTGATGTGGTCCTGGTaGAGCATGCCTCGAGCCACT +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSVMWSW*SMPRAT
Trigger: AGTGGCTCGAGGCATGCTGCACCAGGACCACATCAC...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCACCACCTGTTGCTGAATaGCAGAGTCCTTCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPPPVAE*QSPSAA
Trigger: TGCGGCGGAAGGACTCTGCCATTCAGCAACAGGTGG...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCACAGCGAGACACCGTaGCCAGCGTCGCGTATTTCA +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSHSETP*PASRIS
Trigger: TGAAATACGCGACGCTGGCCACGGTGTCTCGCTGTG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCTTGCGTCAGGGAGGCTaGTCCTGGGTAATCCACATA +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLLRQGG*SWVIHI
Trigger: TATGTGGATTACCCAGGACCAGCCTCCCTGACGCAA...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTTCGATCCTCAGCACATaGTCCAGAACTTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRSILST*SRTSLN
Trigger: ATTCAATGAAGTTCTGGACCATGTGCTGAGGATCGA...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTTCTCAGCCTCTTGCTaGTCTTTCACCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVFSASC*SFTIFF
Trigger: GAAGAAAATGGTGAAAGACCAGCAAGAGGCTGAGAA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACAGTTGTAACTGGGGTTaGACATGTAGTTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNSCNWG*TCSFSS
Trigger: TGAAGAAAAACTACATGTCCAACCCCAGTTACAACT...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTGCTGTGTGTGATCGGTaGCACCCTTCAGGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSAVCDR*HPSGWG
Trigger: ACCCCAACCTGAAGGGTGCCACCGATCACACACAGC...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTTCTGTGCCCACAATGTaGGTGAGGTCGAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSSVPTM*VRSRGC
Trigger: GCAGCCTCTCGACCTCACCCACATTGTGGGCACAGA...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCCCTTTCAGCATTGTTaGGGAGGCCCAGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLPFQHC*GGPAMR
Trigger: CCTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTCTTTCTCAGATGTGTaGAAATTGCAACAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSSFSDV*KLQQGP
Trigger: AGGCCCTTGTTGCAATTTTCACACATCTGAGAAAGA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTCAGGACGTCCTCACTaGACCACACCATGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGSGRPH*TTPCHS
Trigger: GCTGTGGCATGGTGTGGTTCAGTGAGGACGTCCTGA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATTGGCCGCTGCGTTCTTaGCCTCCAGCTCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNWPLRS*PPALGS
Trigger: AGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCA...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCGTTCTGGGCCTCGATaGCAGCAGGCTCCACTTTAT +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSRSGPR*QQAPLY
Trigger: ATAAAGTGGAGCCTGCTGTCATCGAGGCCCAGAACG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGCTCCAGGAAGGTGTTaGGCAGACGCTGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGAPGRC*ADAGRT
Trigger: AGTTCGACCAGCGTCTGCTCAACACCTTCCTGGAGC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCATTGCAACAAGGGCCTaGCTTATCTTGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLIATRA*LILSSS
Trigger: GGAGCTGGACAAGATAAGGCAGGCCCTTGTTGCAAT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCTTCTCGGGATGAGATaGCGAGGACCACAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLLLGMR*RGPQSY
Trigger: ATAACTCTGTGGTCCTCGGCATCTCATCCCGAGAAG...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCTGGGCCCCCTCTTTaGACTGTGTCATCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDESGPPL*TVSSAW
Trigger: CCACGCTGATGACACAGTGCAAAGAGGGGGCCCAGA...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTAGCCAGCTTCACAGCTaGAGGAGGGTTGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGSQLHS*RRVGHG
Trigger: TCCATGGCCAACCCTCCTGCAGCTGTGAAGCTGGCT...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGAAGTGCTGGAACTCTaGATCATAGGTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSEVLEL*IIGGLP
Trigger: GGGGAGCCCACCTATGATGCAGAGTTCCAGCACTTC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTGTCATCTCCCCACGGTaGTACTGGACTCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSVISPR*YWTPGN
Trigger: GTTTCCTGGAGTCCAGTACCACCGTGGGGAGATGAC...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCGGAAATCAGGATGGTTaGCATTGTACTGCGCCACGT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLGNQDG*HCTAPR
Trigger: ACGTGGCGCAGTACAATGCCAACCATCCTGATTTCC...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTTCTGCCTTGATGGCCTaGGCCTCAGAGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSSALMA*ASEMRT
Trigger: TGTCCTCATCTCTGAGGCCCAGGCCATCAAGGCAGA...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTACTGGATTCAAAACTaGATCGTAGCTTTCCACATC +
Preference number: 4 (lower is better)
Translates to: LQPQHLSPANANQPLAFQYWIQN*IVAFHI
Trigger: GATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCTACGGTCAGGCCCTaGATTTTGGGGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDESTVRP*ILGVEP
Trigger: TGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGA...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGGGGCTCAGTGTCTGTaGGATGAGGTGCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGGAQCL*DEVQPV
Trigger: AACTGGCTGCACCTCATCCCACAGACACTGAGCCCC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGAGTGCCCAAGACCTTaGGCAGCTGAGAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGECPRP*AAENSG
Trigger: ACCTGAGTTCTCAGCTGCTCAAGGTCTTGGGCACTC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTGCGGGTACTGGACCTTaGACTTGTCGTGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSAGTGP*TCRAEI
Trigger: AATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGC...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTTCTCCACCAGGCTTGTaGCTGACTTGTGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSSPPGL*LTCGAS
Trigger: AGATGCTCCACAAGTCAGTCACAAGCCTGGTGGAGA...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTTCTGCCCAAACTTGCTaGGAACCTCCTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSSAQTC*EPPYAR
Trigger: CCTGGCATAAGGAGGTTCTCAGCAAGTTTGGGCAGA...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGACGCAGATTGCCTGTaGCAGGTTTGGTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGDADCL*QVWSSP
Trigger: GGGAGAAGACCAAACCTGTCACAGGCAATCTGCGTC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCTCCAGTGCCGGTCTTTaGGTGCTTCTGATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLSSAGL*VLLISV
Trigger: AACTGAAATCAGAAGCACTCAAAGACCGGCACTGGA...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGGTGAACCAGCTCTGTaGTCAAGTGCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGGEPAL*SSAPAS
Trigger: GGAAGCTGGAGCACTTGATCACAGAGCTGGTTCACC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTACACCTCATAGTCAATaGTGGGGACGTTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGTPHSQ*WGRWAQ
Trigger: CTGCGCCCAACGTCCCCATCATTGACTATGAGGTGT...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCCAGGGAAGCCCGGTTaGCGATCTCATAGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSPGKPG*RSHSCN
Trigger: GTTACAACTATGAGATCGTCAACCGGGCTTCCCTGG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCAATCTCCTTCCCTCTaGGGAAGTGCTGGAACTCTG +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLQSPSL*GSAGTL
Trigger: CAGAGTTCCAGCACTTCCTCAGAGGGAAGGAGATTG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCTTACAAGCTTGGCTTTaGGGGTACTGGACCTTGAAC +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLLQAWL*GYWTLN
Trigger: GTTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAA...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCAGGTACTCCCCCAATaGTTTCTGGATCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSQVLPQ*FLDLPQ
Trigger: CTGGGGAAGATCCAGAAAGCATTGGGGGAGTACCTG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAAGCTCTGTGATCAAGTaGTCCAGCTTCCGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDESSVIK*SSFRLR
Trigger: CCGGAGACGGAAGCTGGAGCACTTGATCACAGAGCT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGGTCAGTGGGTGGATTaGAAGCCCCAACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSGQWVD*KPQQTG
Trigger: TCCAGTTTGTTGGGGCTTGCAATCCACCCACTGACC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAATGGTGAAGACCACGTaGAGGTTGCGGATCACCTGG +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEMVKTT*RLRITW
Trigger: CCAGGTGATCCGCAACCTGCACGTGGTCTTCACCAT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTCTGCGTGTTCTGCTCTaGTGCGAGGTCCTCAACATG +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGLRVLL*CEVLNM
Trigger: CATGTTGAGGACCTCGCAGCAGAGCAGAACACGCAG...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGAGCTGGGACGACACTaGCTTGTCTGCATCAATCAC +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLELGRH*LVCINH
Trigger: GTGATTGATGCAGACAAGCCAGTGTCGTCCCAGCTC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTCTGGTATTCACGAATaGCCCCTCGGATGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGSGIHE*PLGCVG
Trigger: GCCCACACATCCGAGGGGCCATTCGTGAATACCAGA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCACACGTTGGATCAGCTaGGTCTGGTATTCACGAATG +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLTRWIS*VWYSRM
Trigger: CATTCGTGAATACCAGACCCAGCTGATCCAACGTGT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATGGCTTTGCGGGTACTaGACCTTGAACTTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPWLCGY*TLNLSC
Trigger: GCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCACCACTAGCAGGGAAATaGTATTGCGCTCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPPLAGK*YCAPPP
Trigger: AGGTGGAGGAGCGCAATACCATTTCCCTGCTAGTGG...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTGGCTTTCCTTATCTaGACCAGGAGAGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSLAFLI*TRRACH
Trigger: GTGGCAAGCTCTCCTGGTCCAGATAAGGAAAGCCAG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATTCAGTGATGGACACTaGAGTTTTAAACATAACCTC +
Preference number: 4 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPFSDGH*SFKHNL
Trigger: GAGGTTATGTTTAAAACTCCAGTGTCCATCACTGAA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCGTGGTGAACAAGTTCTaGCGCATTTGCTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLVVNKF*RICWSK
Trigger: CTTTGACCAGCAAATGCGCCAGAACTTGTTCACCAC...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATAAGGTGATGTGGTCCTaGTGCAGCATGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNKVMWS*CSMPRA
Trigger: GGCTCGAGGCATGCTGCACCAGGACCACATCACCTT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTATGGCGAAGGTGATGTaGTCCTGGTGCAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGMAKVM*SWCSMP
Trigger: AGGCATGCTGCACCAGGACCACATCACCTTCGCCAT...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGTGGAAACAAACATGTaGGCCATGGCCAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGVETNM*AMANRR
Trigger: CCGCCTGTTGGCCATGGCCCACATGTTTGTTTCCAC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTGGCAGGTCACGGACATaGCTCATTTTACAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSGRSRT*LILQAW
Trigger: CCAAGCTTGTAAAATGAGTCATGTCCGTGACCTGCC...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTAGCTGGTTGGCTTGGTaGGCCTTGTTCACAATTGCA +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSSWLAW*ALFTIA
Trigger: TGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCT...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCACGTCAAAGAGAGCCATaGTTCGGTTCAGCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPRQREP*FGSACP
Trigger: AGGACAAGCTGAACCGAATCATGGCTCTCTTTGACG...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTAGAGGTGGTCTTTGCTaGTGGCCTTGGGGTCAATTA +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLRGGLC*WPWGQL
Trigger: TAATTGACCCCAAGGCCATCAGCAAAGACCACCTCT...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATTGGGATCTTATCCGGTaGGATGTTCTGCCGGCCCTT +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNWDLIR*DVLPAL
Trigger: AAGGGCCGGCAGAACATCTCACCGGATAAGATCCCA...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCCTTGCACGCCAGCTTaGATTCACTGTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNPCTPA*IHCRSC
Trigger: GCAGCTTCGACAGTGAATTCAAGCTGGCGTGCAAGG...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCAAAAGCTGATTTCCTaGAAGGCAGTTCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLQKLIS*KAVPDA
Trigger: AGCATCAGGAACTGCCTTGCAGGAAATCAGCTTTTG...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCCCGCTTCTCTTGGATaGGGTACAACGCACGTTCCA +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNPASLG*GTTHVP
Trigger: TGGAACGTGCGTTGTACCGCATCCAAGAGAAGCGGG...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCCCACACCAACGCGATaGCTTCTGCGATTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNPTPTR*LLRLRP
Trigger: AGGCCTTAATCGCAGAAGGCATCGCGTTGGTGTGGG...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATATGATGGAGCGGATCTaGTTCCAGTCCGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNMMERI*FQSVVL
Trigger: GAGCACCACGGACTGGAAGCAGATCCGCTCCATCAT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTAGCCAAATGCCAAACTaGTCATCTGCCTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSSQMPN*SSACTL
Trigger: CAAGGTGCAGGCAGATGAGCAGTTTGGCATTTGGCT...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAAGGTCTTGTCGTAGTTaGGGTTGGAATGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDERSCRS*GWNAPA
Trigger: TGCGGGAGCATTCCAACCCCAACTACGACAAGACCT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTACCGCTCCTGTGACATaGTATAGAACTCCACCATGG +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSTAPVT*YRTPPW
Trigger: CCATGGTGGAGTTCTATACCATGTCACAGGAGCGGT...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCGCAATGGTAGACATCTaGTTTTTGAAAGTTTCACTC +
Preference number: 4 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSAMVDI*FLKVSL
Trigger: GAGTGAAACTTTCAAAAACCAGATGTCTACCATTGC...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCTTCTCGTCCACGTCTaGCCTTTCTGCTTTAAGCAC +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSLLVHV*PFCFKH
Trigger: GTGCTTAAAGCAGAAAGGCCAGACGTGGACGAGAAG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATAAGACCTTGAGCAGCTaGGAACTCAGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNKTLSS*ELRSLE
Trigger: CTCCAGAGACCTGAGTTCTCAGCTGCTCAAGGTCTT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCTTTGGAGAGTGTTATaGTCTCTGGAAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLLWRVL*SLEGSS
Trigger: TGAACTTCCTTCCAGAGATCATAACACTCTCCAAAG...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGTGCCCAAATACGAATaGGACCTTCAACAGGCAATG +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLVPKYE*DLQQAM
Trigger: CATTGCCTGTTGAAGGTCTCATTCGTATTTGGGCAC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTAGAAGCAGATGGCCTTaGGGTTGTCGGAATATTCTG +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSRSRWP*GCRNIL
Trigger: CAGAATATTCCGACAACCTCAAGGCCATCTGCTTCT...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCCAGGTGCTGCTTCTTaGTGGACTTCACAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNPGAAS*WTSQRS
Trigger: AGAACGCTGTGAAGTCCATCAAGAAGCAGCACCTGG...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCTCGTATGGCATCACTaGTCTCCTCAGCCGAGAAGT +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNLVWHH*SPQPRS
Trigger: ACTTCTCGGCTGAGGAGATCAGTGATGCCATACGAG...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGGTACAGCTTGTACCTaGACTCCTCAATGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNGTACT*TPQWVG
Trigger: ACCCACCCATTGAGGAGTGCAGGTACAAGCTGTACC...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCGCTTCCTTAGCCTTTaGACATTTCTCTCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSRFLSL*TFLSVV
Trigger: GACGACAGAGAGAAATGTGCAAAGGCTAAGGAAGCG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTATCAGCTGTTTCCAGTaGCGGTCTTTGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLISCFQ*RSLSAS
Trigger: AGAAGCACTCAAAGACCGGCACTGGAAACAGCTGAT...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGCCGACTTGATACAGTaGTTCAGTGGACCAGTCACC +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNADLIQ*FSGPVT
Trigger: GGTGACTGGTCCACTGAAGCACTGTATCAAGTCGGC...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAATGTCCAGGAAGAACTaGAGAGAGTACTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPMSRKN*REYWYR
Trigger: CCTGTACCAGTACTCTCTGCAGTTCTTCCTGGACAT...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAATGTTCTGCTGCAGGTaGAGGAGTCCCATTTCAAGC +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEMFCCR*RSPISS
Trigger: GCTTGAAATGGGACTCCTCCACCTGCAGCAGAACAT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATGGCAAGCTGATCTCTaGGATCTCAATGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPWQADL*DLNVLL
Trigger: CAGCAGAACATTGAGATCCCAGAGATCAGCTTGCCA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCATTGGCCATCTGAATaGACAGCTGCTGTAACACGT +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSHWPSE*TAAVTR
Trigger: ACGTGTTACAGCAGCTGTCCATTCAGATGGCCAATG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAATGGGGAAATCAGGATaGTTGGCATTGTACTGCGCC +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEMGKSG*LALYCA
Trigger: GGCGCAGTACAATGCCAACCATCCTGATTTCCCCAT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTTCTTGGATGATGGCATaGAACCAAGCCAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSSWMMA*NQASRK
Trigger: TTTCCTGCTGGCTTGGTTCCATGCCATCATCCAAGA...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGTTCTTCAGTTCCTTaGCACCACCAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDECSSVP*HHQMQL
Trigger: CAGCTGCATCTGGTGGTGCCAAGGAACTGAAGAACA...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAGAATTCTGTCATGTTTaGGCCCAGCATCTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEEFCHV*AQHLPK
Trigger: TTTGGGCAGATGCTGGGCTCAAACATGACAGAATTC...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCTGACCACACACCTTTaGGGTCTTGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNLTTHL*GLVTPP
Trigger: TGGAGGAGTTACAAGACCTCAAAGGTGTGTGGTCAG...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTACCACCCAGTTAACATaGAGCCTCTTCATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGTTQLT*SLFISC
Trigger: ACAGCTGATGAAGAGGCTTCATGTTAACTGGGTGGT...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTATCCTCATTTAAGATaGTGCTGGAAACGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGYPHLR*CWKRRR
Trigger: TCGCCGGCGTTTCCAGCATCATCTTAAATGAGGATA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGTCAAGTACATCTCCTaGCACACTTTCTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSVKYIS*HTFFSS
Trigger: AGAGCTGAAGAAAGTGTGTCAGGAGATGTACTTGAC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATGGCCAGGAAGTTATTaGAGATCATGTCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPWPGSY*RSCLCS
Trigger: TGAGCACAGACATGATCTTCAATAACTTCCTGGCCA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAGTTGCTGCATCTCTTTaGATCTGCAGCATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPVAASL*ICSIGE
Trigger: TTCTCCAATGCTGCAGATTCAAAGAGATGCAGCAAC...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTAATTCTTTGCCGACTTaGTACAGTGCTTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLNSLPT*YSASVD
Trigger: GTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATT...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTAGAAGCTGGTCCTTGTaGTCTTCCGGTCCTTATATT +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSRSWSL*SSGPYI
Trigger: AATATAAGGACCGGAAGATCACAAGGACCAGCTTCT...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATCGTCCACTGCTTTCTaGACTCTGTTCAAGATCTCT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPSSTAF*TLFKIS
Trigger: AGAGATCTTGAACAGAGTGCAGAAAGCAGTGGACGA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAACTTCATTTGCAGGTTTaGCACCTGTTGCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDELHLQV*HLLLNG
Trigger: GCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAG...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCCTCTTCACATTGCCTaGACTTACAAGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSPLHIA*TYKHTL
Trigger: AAGAGTGTGCTTGTAAGTGCAGGCAATGTGAAGAGG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAACTCCAGGGGTCTCAGTaGTTCAAAGATTCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDELQGSQ*FKDSSY
Trigger: GTAAGAGGAATCTTTGAAGCACTGAGACCCCTGGAG...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTCTGCTCTGGTGAACTaGTATCCAGCCAAATGCCAA +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGSALVN*YPAKCQ
Trigger: TTGGCATTTGGCTGGATAGCAGTTCACCAGAGCAGA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGTTGATGGCCTTATCTaGTTGGTTAAAGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLVDGLI*LVKAFC
Trigger: GCAGAAGGCTTTAACCAAGCAGATAAGGCCATCAAC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAAAACTGACAGTGGCATaGAAACGTTTGCCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEKLTVA*KRLPCF
Trigger: GAAGCACGGCAAACGTTTCCATGCCACTGTCAGTTT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAACTTCAAGTTCACCTTaGACTGGACCTTGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPTSSSP*TGPCRN
Trigger: ATTACGGCAAGGTCCAGTCCAAGGTGAACTTGAAGT...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAACAAGAAGGCGGGAACTaGAACCTTTGTTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEQEGGN*NLCFSS
Trigger: GCTGGAAAAACAAAGGTTCCAGTTCCCGCCTTCTTG...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATATACCATCAGGCATCTaGATGTCCTTGTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNIPSGI*MSLCPS
Trigger: TGACGGGCACAAGGACATCCAGATGCCTGATGGTAT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTGTGGAGATGGCATTaGAGAGTGATAGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSLWRWH*RVIACC
Trigger: ACAACAAGCTATCACTCTCCAATGCCATCTCCACAG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCCATATCGGGCAAGTTaGTTTCATCACAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSPYRAS*FHHRTR
Trigger: TCTTGTTCTGTGATGAAATCAACTTGCCCGATATGG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTGGGATATAATCCTTTaGCAGCCAGTTGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGWDIIL*QPVAVQ
Trigger: CTGTACAGCAACTGGCTGTCAAAGGATTATATCCCA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCGTTGTAAATGTTTTCTaGCTGCATATCCCACAAACA +
Preference number: 4 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLVVNVF*LHIPQT
Trigger: TGTTTGTGGGATATGCAGGCAGAAAACATTTACAAC...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTACCACTAGCTGGGCCTaGTATTTATCAATCCAAGTA +
Preference number: 4 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSTTSWA*YLSIQV
Trigger: TACTTGGATTGATAAATACCAGGCCCAGCTAGTGGT...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAACCTCATTCAGAGCTTaGAGCAGAGACTTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDETSFRA*SRDFSS
Trigger: GCTTGAAAAGTCTCTGCTCCAAGCTCTGAATGAGGT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATCTTGCTATTCCCAATaGTCTCAAGCAAATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPSCYSQ*SQANPH
Trigger: ATGAGGATTTGCTTGAGATCATTGGGAATAGCAAGA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATATCCATGTCGACTTCTaGTTTATCCTCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNIHVDF*FILSLS
Trigger: GGACAAGCTGAGGATAAAGCAGAAGTCGACATGGAT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCTATGTTAGGGAAGTaGTTCAAGGCAACCATGTCA +
Preference number: 4 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDESMLGK*FKATMS
Trigger: TGACATGGTTGCCTTGAAGCACTTCCCTAACATAGA...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAAATCAGATCTTTAAATaGAGGCAGACAGCTCAACCT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPNQIFK*RQTAQP
Trigger: AGGTTGAGCTGTCTGCCTGCATTTAAAGATCTGATT...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTTGGTTAAGGAAAGTTaGGTCTTCAACCTTATCACC +
Preference number: 4 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSLVKES*VFNLIT
Trigger: GGTGATAAGGTTGAAGACCCAACTTTCCTTAACCAA...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAACTCCAGACTGTAATTaGTTAAGGAAAGTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPTPDCN*LRKVGS
Trigger: AGACCCAACTTTCCTTAACCAATTACAGTCTGGAGT...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR TCA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAATTTGTTCTGATAGTTaGCCAAGTCTAGTTCGTATG +
Preference number: 4 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPICSDS*PSLVRM
Trigger: CATACGAACTAGACTTGGTCAACTATCAGAACAAAT...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR GCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGCGTATTTCAAGTCCTaGACTTCAAACATTATTCGC +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNAYFKS*TSNIIR
Trigger: GCGAATAATGTTTGAAGTGCAGGACTTGAAATACGC...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CCA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATTTTATCATACACAACTaGCATGTAGTCAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNFIIHN*HVVRHY
Trigger: ATAGTGCCTGACTACATGCCAGTTGTGTATGATAAA...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGCTTACGCAGGTGCTTCTGCAGCACCGCCACGTCCGCCACATTCTaGACCGCCGACACCTCCAGGCCGGCCGAGCCGTCCTCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SLRRCFCSTATSATF*TADTSRPAEPSSPP
Trigger: CGGCGGCGAGGACGGCTCGGCCGGCCTGGAGGTGTCGGCGGTGCAGAATGTGGCGGACGTGGCGGTGCTGCAGAAGCACCTGCGTAAGCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ACCAGGACCGTGTGGACCTGCGGGTCTGACAGGAACTTGCGCATCTaGTCCAGGGCGCTCTTCTCCTCCAGCGCCGCCTCCAGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: TRTVWTCGSDRNLRI*SRALFSSSAASSAA
Trigger: GGCTGCGCTGGAGGCGGCGCTGGAGGAGAAGAGCGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCAGGATGGTTGGCATTGTACTGCGCCACGTTGCGGCAGGCCTGGTaGAGCATGGAGAAGAGCGAGCCCAGGCAGCGCAGGCGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SGWLALYCATLRQAW*SMEKSEPRQRRRVR
Trigger: CCTGACGCGCCTGCGCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GCAAGGACCTCAGCAGTCCGGAAGCCCTGCGAGTACAGCATGACCTaGGCGATCAGCTGCCGGTCAGGCTTGGTCATCGCCAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: ARTSAVRKPCEYSMT*AISCRSGLVIAKLR
Trigger: CCGGAGCTTGGCGATGACCAAGCCTGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGCTGAGGTCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACGGGTCTGACAGGAACTaGCGCATCTGCTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHGSDRN*RICSRA
Trigger: CGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCC...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAGTCAGGCCCTGGATTTaGGGGGTGGAGCCAGCACTC +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPVRPWI*GVEPAL
Trigger: GAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGAC...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TTTGAGGGTGGAGCGCTCCACCAGGACCGTGTGGACCTGCGGGTCTaGCAGGAACTTGCGCATCTGCTCCAGGGCGCTCTTCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FEGGALHQDRVDLRV*QELAHLLQGALLLQ
Trigger: CTGGAGGAGAAGAGCGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCTGGTGGAGCGCTCCACCCTCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CTCAGTGTCTGTGGGATGAGGTGCAGCCAGTTGGACGCCGTGGTGTaGAGTGTCCTCATCCAGGCTGGACGGCCATCGGAGGTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LSVCGMRCSQLDAVV*SVLIQAGRPSEVES
Trigger: GGACTCCACCTCCGATGGCCGTCCAGCCTGGATGAGGACACTGCACACCACGGCGTCCAACTGGCTGCACCTCATCCCACAGACACTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AAATCAGGATGGTTGGCATTGTACTGCGCCACGTTGCGGCAGGCCTaGTGCAGCATGGAGAAGAGCGAGCCCAGGCAGCGCAGGCGCGTC +
Preference number: 5 (lower is better)
Translates to: KSGWLALYCATLRQA*CSMEKSEPRQRRRV
Trigger: GACGCGCCTGCGCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CCGTGGTGTGCAGTGTCCTCATCCAGGCTGGACGGCCATCGGAGGTaGAGTCCGTCCTTGCCTTCTTCTCCGTCTCTGCGTAGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: PWCAVSSSRLDGHRR*SPSLPSSPSLRRPG
Trigger: ACCTGGCCTACGCAGAGACGGAGAAGAAGGCAAGGACGGACTCCACCTCCGATGGCCGTCCAGCCTGGATGAGGACACTGCACACCACGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GTGCAGCCAGTTGGACGCCGTGGTGTGCAGTGTCCTCATCCAGGCTaGACGGCCATCGGAGGTGGAGTCCGTCCTTGCCTTCTTCTCCGT +
Preference number: 5 (lower is better)
Translates to: VQPVGRRGVQCPHPG*TAIGGGVRPCLLLR
Trigger: ACGGAGAAGAAGGCAAGGACGGACTCCACCTCCGATGGCCGTCCAGCCTGGATGAGGACACTGCACACCACGGCGTCCAACTGGCTGCAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTAGCTGCCGGTCAGGCTaGGTCATCGCCAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRSCRSG*VIAKLR
Trigger: CCGGAGCTTGGCGATGACCAAGCCTGACCGGCAGCT...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAATGATGTGCTCCAGCTaGAAGGCGTGCTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPMMCSS*KACSSA
Trigger: GGCGCTGGAGCACGCCTTCAAGCTGGAGCACATCAT...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTTGTACTGCGCCACGTaGCGGCAGGCCTGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSLYCAT*RQAWCS
Trigger: GCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TGTTGGCAAGGACCTCAGCAGTCCGGAAGCCCTGCGAGTACAGCATaGCCTGGGCGATCAGCTGCCGGTCAGGCTTGGTCATCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: CWQGPQQSGSPASTA*PGRSAAGQAWSSPS
Trigger: GCTTGGCGATGACCAAGCCTGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGCTGAGGTCCTTGCCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GCAGTCCGGAAGCCCTGCGAGTACAGCATGACCTGGGCGATCAGCTaGCGGTCAGGCTTGGTCATCGCCAAGCTCCGGAAGAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: AVRKPCEYSMTWAIS*RSGLVIAKLRKSFL
Trigger: CAAGAAGCTCTTCCGGAGCTTGGCGATGACCAAGCCTGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GGGTTGATCTCCATGGTGAGGAAAAGTCGGAAGCAGGCGTGGGGCTaGAGGGAGTGCAGCTTCTTCTCCAGCTGCATCAGCCAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: GLISMVRKSRKQAWG*RECSFFSSCISQPG
Trigger: CCCGGGCTGGCTGATGCAGCTGGAGAAGAAGCTGCACTCCCTGCAGCCCCACGCCTGCTTCCGACTTTTCCTCACCATGGAGATCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TGTCCTCATCCAGGCTGGACGGCCATCGGAGGTGGAGTCCGTCCTTaGCTTCTTCTCCGTCTCTGCGTAGGCCAGGTCATCCTCGTCCTC +
Preference number: 5 (lower is better)
Translates to: CPHPGWTAIGGGVRP*LLLRLCVGQVILVL
Trigger: GAGGACGAGGATGACCTGGCCTACGCAGAGACGGAGAAGAAGGCAAGGACGGACTCCACCTCCGATGGCCGTCCAGCCTGGATGAGGACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTCTCCACGGTGCGCTTCAGGGGGCTCAGTGTCTGTGGGATGAGGTaGAGCCAGTTGGACGCCGTGGTGTGCAGTGTCCTCATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: FSTVRFRGLSVCGMR*SQLDAVVCSVLIQA
Trigger: AGCCTGGATGAGGACACTGCACACCACGGCGTCCAACTGGCTGCACCTCATCCCACAGACACTGAGCCCCCTGAAGCGCACCGTGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCACCAACATCCTCTTTGAGGGTGGAGCGCTCCACCAGGACCGTGTaGACCTGCGGGTCTGACAGGAACTTGCGCATCTGCTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SPTSSLRVERSTRTV*TCGSDRNLRICSRA
Trigger: CGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCTGGTGGAGCGCTCCACCCTCAAAGAGGATGTTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AGGACCCTTTCAGCATTGTTGGGGAGGCCCAGCCATGAGGGTGTCTaGGCGTCAGGCAGCAGCTCCACCCACTGCACAAACTCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: RTLSALLGRPSHEGV*ASGSSSTHCTNSSR
Trigger: GCGAGAGGAGTTTGTGCAGTGGGTGGAGCTGCTGCCTGACGCCCAGACACCCTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGGCCCCACGCGCCCACTaGGCAAAGCCCCACAAAGAT +
Preference number: 5 (lower is better)
Translates to: LQPQHLSPANANQPLAFQAPRAH*AKPHKD
Trigger: ATCTTTGTGGGGCTTTGCCAAGTGGGCGCGTGGGGC...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACAGCTGCAGGAGGGTaGGCCATGGACCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSTAAGG*AMDLTS
Trigger: GGAGGTGAGGTCCATGGCCAACCCTCCTGCAGCTGT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTCTCGGCGCTTGTTaGTTTCACCCAGCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPLLGAC*FHPAQL
Trigger: CAGCTGCGCTGGGTGAAACAAACAAGCGCCGAGAAG...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GGTGGTAAGCAGGACCCTTTCAGCATTGTTGGGGAGGCCCAGCCATaGGGGTGTCTGGGCGTCAGGCAGCAGCTCCACCCACTGCACAAA +
Preference number: 5 (lower is better)
Translates to: GGKQDPFSIVGEAQP*GCLGVRQQLHPLHK
Trigger: TTTGTGCAGTGGGTGGAGCTGCTGCCTGACGCCCAGACACCCTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGGTCCTGCTTACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCAGCACAGACTGCAAGGGCCCCACATCACCACCTCCCCCAACGTTaGTCAGCGCATTCTCCACGTTCTCGGACCAGGCTATCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SAQTARAPHHHLPQR*SAHSPRSRTRLSGL
Trigger: CAGCCCAGATAGCCTGGTCCGAGAACGTGGAGAATGCGCTGAGCAACGTTGGGGGAGGTGGTGATGTGGGGCCCTTGCAGTCTGTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AACGGGACGATCTTGTTGGCAAGGACCTCAGCAGTCCGGAAGCCCTaGGAGTACAGCATGACCTGGGCGATCAGCTGCCGGTCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: NGTILLARTSAVRKP*EYSMTWAISCRSGL
Trigger: CAAGCCTGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGCTGAGGTCCTTGCCAACAAGATCGTCCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCTGCATGGGGAAATCAGGATGGTTGGCATTGTACTGCGCCACGTTaGGGCAGGCCTGGTGCAGCATGGAGAAGAGCGAGCCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SAWGNQDGWHCTAPR*GRPGAAWRRASPGS
Trigger: GCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CTCACCAAGCAGCAGGCAGATGGACTCCAGAGCCAGCTTCACAGCTaGAGGAGGGTTGGCCATGGACCTCACCTCCACCAGGTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: LTKQQADGLQSQLHS*RRVGHGPHLHQVLL
Trigger: AAGCAGCACCTGGTGGAGGTGAGGTCCATGGCCAACCCTCCTGCAGCTGTGAAGCTGGCTCTGGAGTCCATCTGCCTGCTGCTTGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS GCA 90 bp ATGGCATTCTCTGTGCACAGGTCGTCGGCAGGCAGAGAGCTGGCCTaGCAGCGGAGGCGTTCGTCAGCATTGGAGAGGTACTCCGTCCTT +
Preference number: 5 (lower is better)
Translates to: MAFSVHRSSAGRELA*QRRRSSALERYSVL
Trigger: AAGGACGGAGTACCTCTCCAATGCTGACGAACGCCTCCGCTGGCAGGCCAGCTCTCTGCCTGCCGACGACCTGTGCACAGAGAATGCCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CCCAGCCATGAGGGTGTCTGGGCGTCAGGCAGCAGCTCCACCCACTaGACAAACTCCTCTCGCCTGATACCATCAGGCATCTGGATGTCC +
Preference number: 5 (lower is better)
Translates to: PSHEGVWASGSSSTH*TNSSRLIPSGIWMS
Trigger: GGACATCCAGATGCCTGATGGTATCAGGCGAGAGGAGTTTGTGCAGTGGGTGGAGCTGCTGCCTGACGCCCAGACACCCTCATGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CGGCAGGCAGAGAGCTGGCCTGCCAGCGGAGGCGTTCGTCAGCATTaGAGAGGTACTCCGTCCTTGCAATGTCTGTGCGGAACTGGATGT +
Preference number: 5 (lower is better)
Translates to: RQAESWPASGGVRQH*RGTPSLQCLCGTGC
Trigger: ACATCCAGTTCCGCACAGACATTGCAAGGACGGAGTACCTCTCCAATGCTGACGAACGCCTCCGCTGGCAGGCCAGCTCTCTGCCTGCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCTCCCGCAGTGCCTCTaGTATGCACTGCACCTGCTG +
Preference number: 5 (lower is better)
Translates to: LQPQHLSPANANQPLAFQLPQCL*YALHLL
Trigger: CAGCAGGTGCAGTGCATACAAGAGGCACTGCGGGAG...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACAGCGTCAGGAGCTTGTaGTCATCCAGCACGGAGTTC +
Preference number: 5 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSVRSL*SSSTEF
Trigger: GAACTCCGTGCTGGATGACAACAAGCTCCTGACGCT...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTCTGGGGCTGCCACCTaGTGTGTCTCCACTTCAATC +
Preference number: 5 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHSGAAT*CVSTSI
Trigger: GATTGAAGTGGAGACACACAAGGTGGCAGCCCCAGA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTGGCTTCCCGGTGTGTaGGGGGCTGCGGCAGTTTAT +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVWLPGV*GAAAVY
Trigger: ATAAACTGCCGCAGCCCCCAACACACCGGGAAGCCA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTGACCTCCAGCTCTaGGCTCTTGATCCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLLDLQL*ALDPQV
Trigger: GACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAG...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAACGGGCACCTTGGGGTaGATCTCCATGGTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPTGTLG*ISMVRK
Trigger: TTTCCTCACCATGGAGATCAACCCCAAGGTGCCCGT...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CATTGGCATTCTTGGCCGTGCCGAGCTGATCTCGGAGGCGGGCGGTaGTGCGGGTCTCCACACGGTCGATCCTCTCATCGTATCTCTTCA +
Preference number: 5 (lower is better)
Translates to: HWHSWPCRADLGGGR*CGSPHGRSSHRISS
Trigger: TGAAGAGATACGATGAGAGGATCGACCGTGTGGAGACCCGCATCACCGCCCGCCTCCGAGATCAGCTCGGCACGGCCAAGAATGCCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp ACGACGACATCTGGGGCTGCCACCTTGTGTGTCTCCACTTCAATCTaGGGCACCTTGGCCTGCCACGGCGACCACTCTCCACTGATGGAC +
Preference number: 5 (lower is better)
Translates to: TTTSGAATLCVSTSI*GTLACHGDHSPLMD
Trigger: GTCCATCAGTGGAGAGTGGTCGCCGTGGCAGGCCAAGGTGCCTCAGATTGAAGTGGAGACACACAAGGTGGCAGCCCCAGATGTCGTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp ACAAACATGTGGGCCATGGCCAACAGGCGGTCGGGTCGGAAGGCTTaGATCAGGAGCAGGCGGTGGATGGCCTGCCCAATGGGAGTTGTA +
Preference number: 5 (lower is better)
Translates to: TNMWAMANRRSGRKA*IRSRRWMACPMGVV
Trigger: TACAACTCCCATTGGGCAGGCCATCCACCGCCTGCTCCTGATTCAAGCCTTCCGACCCGACCGCCTGTTGGCCATGGCCCACATGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GGGCGTCAGGCAGCAGCTCCACCCACTGCACAAACTCCTCTCGCCTaGTACCATCAGGCATCTGGATGTCCTTGTGCCCGTCAACCTTGC +
Preference number: 5 (lower is better)
Translates to: GRQAAAPPTAQTPLA*YHQASGCPCARQPC
Trigger: GCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGATGGTATCAGGCGAGAGGAGTTTGTGCAGTGGGTGGAGCTGCTGCCTGACGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CCTGCACCTCCTTCTTTAGGCCGGCCACTAGCAGGGAAATGGTATTaGGCTCCTCCACCTTCTCACAGGTGCGCTCGTAAGTCCGGACGC +
Preference number: 5 (lower is better)
Translates to: PAPPSLGRPLAGKWY*APPPSHRCARKSGR
Trigger: GCGTCCGGACTTACGAGCGCACCTGTGAGAAGGTGGAGGAGCGCAATACCATTTCCCTGCTAGTGGCCGGCCTAAAGAAGGAGGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GCTGCACGTAGGGGTCGAGCTTGTAGGACTCCCACACCAACGCGATaGCTTCTGCGATTAAGGCCTGCACCTCCTTCTTTAGGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: AARRGRACRTPTPTR*LLRLRPAPPSLGRP
Trigger: TGGCCGGCCTAAAGAAGGAGGTGCAGGCCTTAATCGCAGAAGGCATCGCGTTGGTGTGGGAGTCCTACAAGCTCGACCCCTACGTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CACCCTCAAGCCTCTCTAGAGCCTTCAGCAGCACTCGCCAGGCCATaGTCTTCCCACTTCCTGAAGGCCCAACCATCATCAGGCCGTGGT +
Preference number: 5 (lower is better)
Translates to: HPQASLEPSAALARP*SSHFLKAQPSSGRG
Trigger: ACCACGGCCTGATGATGGTTGGGCCTTCAGGAAGTGGGAAGAGCATGGCCTGGCGAGTGCTGCTGAAGGCTCTAGAGAGGCTTGAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp ATCCTTGATGTTCTCCACGGTGCGCTTCAGGGGGCTCAGTGTCTGTaGGATGAGGTGCAGCCAGTTGGACGCCGTGGTGTGCAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: ILDVLHGALQGAQCL*DEVQPVGRRGVQCP
Trigger: AGGACACTGCACACCACGGCGTCCAACTGGCTGCACCTCATCCCACAGACACTGAGCCCCCTGAAGCGCACCGTGGAGAACATCAAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCTGGACCAGGAGAGCTaGCCACTTGTTGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNLDQES*PLVEIF
Trigger: GAAGATCTCAACAAGTGGCAAGCTCTCCTGGTCCAG...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGTGCTCCTTGACCTTGTaGAAGAGGTCATCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLCSLTL*KRSSQP
Trigger: AGGCTGGGATGACCTCTTCAACAAGGTCAAGGAGCA...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAAAGAACGGGACGATCTaGTTGGCAAGGACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPKNGTI*LARTSA
Trigger: TGCTGAGGTCCTTGCCAACAAGATCGTCCCGTTCTT...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCAGCTTGGGCACCATaGTCTCGCAGACACTCTGGA +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVPAWAP*SRRHSG
Trigger: TCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCTGG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGAAGAGTGTCATGGTCTaGCCAGACCCAGGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LQPQHLSPANANQPLAFQKSVMV*PDPGGP
Trigger: TGGCCCTCCTGGGTCTGGCAAGACCATGACACTCTT...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCGGGTCAGTGGGTGGATaGCAAGCCCCAACAAACTGG +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSGSVGG*QAPTNW
Trigger: CCAGTTTGTTGGGGCTTGCAATCCACCCACTGACCC...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTTCTGGGCCCCCTCTTaGCACTGTGTCATCAGCGTG +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSFWAPS*HCVISV
Trigger: CACGCTGATGACACAGTGCAAAGAGGGGGCCCAGAA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTCCAGCTCTTGGCTCTaGATCCTCAGGTCACGGCGC +
Preference number: 5 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSSSSWL*ILRSRR
Trigger: GCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCAAGTTCTGGCGCATTaGCTGGTCAAAGTAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLQVLAH*LVKVAS
Trigger: GCTGGCTACTTTGACCAGCAAATGCGCCAGAACTTG...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAAGGTTCACGGGCACCTaGGGGTTGATCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPRFTGT*GLISMV
Trigger: CACCATGGAGATCAACCCCAAGGTGCCCGTGAACCT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACAATGTCCTCAGCATGTaGGCTTTCACTCCGGGTGGT +
Preference number: 5 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNNVLSM*AFTPGG
Trigger: ACCACCCGGAGTGAAAGCCAACATGCTGAGGACATT...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAACCCTTTCAGCATTGTaGGGGAGGCCCAGCCATGAG +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPTLSAL*GRPSHE
Trigger: CTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGGT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GAGAAAATCCTGAACATCTCATTGGCATTCTTGGCCGTGCCGAGCTaGTCTCGGAGGCGGGCGGTGATGCGGGTCTCCACACGGTCGATC +
Preference number: 5 (lower is better)
Translates to: EKILNISLAFLAVPS*SRRRAVMRVSTRSI
Trigger: GATCGACCGTGTGGAGACCCGCATCACCGCCCGCCTCCGAGATCAGCTCGGCACGGCCAAGAATGCCAATGAGATGTTCAGGATTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CCCCACGGTGGTACTGGACTCCAGGAAACACGTCAGACAGGAGGCTaGAGAGCAGCGGGATATCTTCTGCCACCAGCTTGGGCACCATTG +
Preference number: 5 (lower is better)
Translates to: PHGGTGLQETRQTGG*RAAGYLLPPAWAPL
Trigger: CAATGGTGCCCAAGCTGGTGGCAGAAGATATCCCGCTGCTCTTCAGCCTCCTGTCTGACGTGTTTCCTGGAGTCCAGTACCACCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCCGCTAAGACGTTGAGTGTGACCTCCACATTGCTCAGCACAGACTaGAAGGGCCCCACATCACCACCTCCCCCAACGTTGCTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: SAKTLSVTSTLLSTD*KGPTSPPPPTLLSA
Trigger: TGCGCTGAGCAACGTTGGGGGAGGTGGTGATGTGGGGCCCTTGCAGTCTGTGCTGAGCAATGTGGAGGTCACACTCAACGTCTTAGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GAATCTGCAGCATTGGAGAAGCGGCCTCTTCGCCCTCGTCTTCTTTaGCTTTTCGCCTACGCTGTGCCTCGTCCTCCCCTTCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: ESAALEKRPLRPRLL*LFAYAVPRPPLHPG
Trigger: CCCTGGATGAAGGGGAGGACGAGGCACAGCGTAGGCGAAAAGGCAAAGAAGACGAGGGCGAAGAGGCCGCTTCTCCAATGCTGCAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ACAGCTGCAGGAGGGTTGGCCATGGACCTCACCTCCACCAGGTGCTaGTTCTTGATGGACTTCACAGCGTTCTGGGCCTCGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: TAAGGLAMDLTSTRC*FLMDFTAFWASMTA
Trigger: TGCTGTCATCGAGGCCCAGAACGCTGTGAAGTCCATCAAGAAGCAGCACCTGGTGGAGGTGAGGTCCATGGCCAACCCTCCTGCAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGCTTGATCCTCGCTAGCAGCATGGCGAAGGTGATGTGGTCCTGGTaGAGCATGCCTCGAGCCACTCGGTTAAAGGCCACCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SLILASSMAKVMWSW*SMPRATRLKATWKR
Trigger: CCTCTTCCAGGTGGCCTTTAACCGAGTGGCTCGAGGCATGCTGCACCAGGACCACATCACCTTCGCCATGCTGCTAGCGAGGATCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TGTAGCGCTCCAGCTGCTCAATCTGCATGGGGAAATCAGGATGGTTaGCATTGTACTGCGCCACGTTGCGGCAGGCCTGGTGCAGCATGG +
Preference number: 5 (lower is better)
Translates to: CSAPAAQSAWGNQDG*HCTAPRCGRPGAAW
Trigger: CCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGATTGAGCAGCTGGAGCGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GTGCCTTTCAGCTTGATCCTCGCTAGCAGCATGGCGAAGGTGATGTaGTCCTGGTGCAGCATGCCTCGAGCCACTCGGTTAAAGGCCACC +
Preference number: 5 (lower is better)
Translates to: VPFSLILASSMAKVM*SWCSMPRATRLKAT
Trigger: GGTGGCCTTTAACCGAGTGGCTCGAGGCATGCTGCACCAGGACCACATCACCTTCGCCATGCTGCTAGCGAGGATCAAGCTGAAAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CAGCTCAACCTCACGACAGCTTCTGCCTGCTCTACGGTCAGGCCCTaGATTTTGGGGGTGGAGCCAGCACTCAGCACAATCTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QLNLTTASACSTVRP*ILGVEPALSTISFP
Trigger: AGGGAAGGAGATTGTGCTGAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGTCGTGAGGTTGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACGGAAGCCAAGCCACTaGAGGTTCCGGACTTCTTTG +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPRKPSH*RFRTSL
Trigger: CAAAGAAGTCCGGAACCTCAAGTGGCTTGGCTTCCG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAAGCATCTGCCCAAACTaGCTGAGAACCTCCTTATGC +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPSICPN*LRTSLC
Trigger: GCATAAGGAGGTTCTCAGCAAGTTTGGGCAGATGCT...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAACAGGCAGCAGATGTTaGATGTCCGCACTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPTGSRC*MSALPV
Trigger: CACAGGCAGTGCGGACATCAAACATCTGCTGCCTGT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCCCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCCTGGTAACGTCTCTTaGGTGAACCAGCTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SHPTVSNRSTCHPPTRTNPGNVS*VNQLCD
Trigger: ATCACAGAGCTGGTTCACCAAAGAGACGTTACCAGG...GTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTAACGGGACGATCTTGTaGGCAAGGACCTCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRNGTIL*ARTSAV
Trigger: GACTGCTGAGGTCCTTGCCAACAAGATCGTCCCGTT...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATCTTCTGCCACCAGCTaGGGCACCATTGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPSSATS*GTIVSQ
Trigger: CTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAGA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCGGGAAATCAGGATGGTaGGCATTGTACTGCGCCACG +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSGKSGW*ALYCAT
Trigger: CGTGGCGCAGTACAATGCCAACCATCCTGATTTCCC...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTGGACAAGAAGGGGATaGCCAAATCTCAGAGCACTC +
Preference number: 5 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHWTRRG*PNLRAL
Trigger: GAGTGCTCTGAGATTTGGCAATCCCCTTCTTGTCCA...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCGTGGCACCCTTCAGGTaGGGGTTCTCATACAGCACG +
Preference number: 5 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSVAPFR*GFSYST
Trigger: CGTGCTGTATGAGAACCCCAACCTGAAGGGTGCCAC...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCAAGGACTCTCCGAGGTTaGTGGAAACAAACATGTGGG +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPRTLRG*WKQTCG
Trigger: CCCACATGTTTGTTTCCACAAACCTCGGAGAGTCCT...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CTCTCAATGGTGAAGATGCGCCCGGAGACACCAAGGTTGCGCTGCTaGACCTTCCTCGCCCAGTCATCGAAGATCTCCTGGGTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LSMVKMRPETPRLRC*TFLAQSSKISWVLS
Trigger: GCTCAACACCCAGGAGATCTTCGATGACTGGGCGAGGAAGGTTCAGCAGCGCAACCTTGGTGTCTCCGGGCGCATCTTCACCATTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CCTTGTGCCACCAGCAGCACATCCTTGACGACAGCTTCGTTCTTCTaGAGGTCCACGTCCCAGATCTGGCCCAGCGTCAGCTCAGAAACC +
Preference number: 5 (lower is better)
Translates to: PCATSSTSLTTASFF*RSTSQIWPSVSSET
Trigger: GGTTTCTGAGCTGACGCTGGGCCAGATCTGGGACGTGGACCTTCAGAAGAACGAAGCTGTCGTCAAGGATGTGCTGCTGGTGGCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp ACTCCCTGGTGTTGGGATCCAAGGTTCCGTAGAGGTGGTCTTTGCTaGTGGCCTTGGGGTCAATTATGTGGGCCACGCCCTCCACACCCT +
Preference number: 5 (lower is better)
Translates to: TPWCWDPRFRRGGLC*WPWGQLCGPRPPHP
Trigger: AGGGTGTGGAGGGCGTGGCCCACATAATTGACCCCAAGGCCATCAGCAAAGACCACCTCTACGGAACCTTGGATCCCAACACCAGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CAGACCTGTGACTCCAAAGCTGCAGGCATCAAGGGTGGCACTCTGTaGGGCGGTGACATTGACTTCCAGGCAGAGTTCCTCCAGGGACCA +
Preference number: 5 (lower is better)
Translates to: QTCDSKAAGIKGGTL*GGDIDFQAEFLQGP
Trigger: TGGTCCCTGGAGGAACTCTGCCTGGAAGTCAATGTCACCGCCTCACAGAGTGCCACCCTTGATGCCTGCAGCTTTGGAGTCACAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTGGGGTTGGAATGCTCCCGCAGTGCCTCTTGTATGCACTGCACCTaGTGGGATACAGCTGAGAGCATCCGCTCCTCCAGGCGGTTAAAC +
Preference number: 5 (lower is better)
Translates to: LGLECSRSASCMHCT*WDTAESIRSSRRLN
Trigger: GTTTAACCGCCTGGAGGAGCGGATGCTCTCAGCTGTATCCCAGCAGGTGCAGTGCATACAAGAGGCACTGCGGGAGCATTCCAACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGCTGCTCAATCTGCATGGGGAAATCAGGATGGTTGGCATTGTACTaGGCCACGTTGCGGCAGGCCTGGTGCAGCATGGAGAAGAGCGAG +
Preference number: 5 (lower is better)
Translates to: SCSICMGKSGWLALY*ATLRQAWCSMEKSE
Trigger: CTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGATTGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTCACAGCTGCAGGAGGGTTGGCCATGGACCTCACCTCCACCAGGTaGTGCTTCTTGATGGACTTCACAGCGTTCTGGGCCTCGATGACA +
Preference number: 5 (lower is better)
Translates to: FTAAGGLAMDLTSTR*CFLMDFTAFWASMT
Trigger: TGTCATCGAGGCCCAGAACGCTGTGAAGTCCATCAAGAAGCAGCACCTGGTGGAGGTGAGGTCCATGGCCAACCCTCCTGCAGCTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AAGTGCAGTGCTCCGGTTTACCTTTGCTTCCACAGCTGCCAGGTCTaGCTTGATGGCCTGGGCCTCAGAGATGAGGACAGCGTACTCCTC +
Preference number: 5 (lower is better)
Translates to: KCSAPVYLCFHSCQV*LDGLGLRDEDSVLL
Trigger: GAGGAGTACGCTGTCCTCATCTCTGAGGCCCAGGCCATCAAGGCAGACCTGGCAGCTGTGGAAGCAAAGGTAAACCGGAGCACTGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AGGTTCTCCTCCCGCTTCCTCTTGACGATGTCTCGCAGCAGCACCTaGAGCTTCTCGTACTCGTCGTCCCACGTCTGGAAGACTTCGAAG +
Preference number: 5 (lower is better)
Translates to: RFSSRFLLTMSRSST*SFSYSSSHVWKTSK
Trigger: CTTCGAAGTCTTCCAGACGTGGGACGACGAGTACGAGAAGCTCCAGGTGCTGCTGCGAGACATCGTCAAGAGGAAGCGGGAGGAGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GGGTTGGAATGCTCCCGCAGTGCCTCTTGTATGCACTGCACCTGCTaGGATACAGCTGAGAGCATCCGCTCCTCCAGGCGGTTAAACTCA +
Preference number: 5 (lower is better)
Translates to: GLECSRSASCMHCTC*DTAESIRSSRRLNS
Trigger: TGAGTTTAACCGCCTGGAGGAGCGGATGCTCTCAGCTGTATCCCAGCAGGTGCAGTGCATACAAGAGGCACTGCGGGAGCATTCCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TTCAGCTTGATCCTCGCTAGCAGCATGGCGAAGGTGATGTGGTCCTaGTGCAGCATGCCTCGAGCCACTCGGTTAAAGGCCACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FSLILASSMAKVMWS*CSMPRATRLKATWK
Trigger: CTTCCAGGTGGCCTTTAACCGAGTGGCTCGAGGCATGCTGCACCAGGACCACATCACCTTCGCCATGCTGCTAGCGAGGATCAAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCATTCTCCTTGGTTCTGTaGTGCGACTGCTGTGACCTG +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPFSLVL*CDCCDL
Trigger: CAGGTCACAGCAGTCGCACAACAGAACCAAGGAGAA...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTGCGGGTACTGGACCTaGAACTTGTCGTGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSCGYWT*NLSCRD
Trigger: ATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCA...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGACTCATTTTACAAGCTaGGCTTTGCGGGTACTGGAC +
Preference number: 5 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLTHFTS*ALRVLD
Trigger: GTCCAGTACCCGCAAAGCCAAGCTTGTAAAATGAGT...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTTCCATGTCCAGCTTGTaGACCCAGATGGGCAGATTG +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRSMSSL*TQMGRL
Trigger: CAATCTGCCCATCTGGGTCAACAAGCTGGACATGGA...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGTGCTTTATCCTCAGCTaGTCCAAGAAGAACCTGGGT +
Preference number: 5 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLCFILS*SKKNLG
Trigger: ACCCAGGTTCTTCTTGGACAAGCTGAGGATAAAGCA...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACGGGAACTGGAACCTTaGTTTTTCCAGCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPRELEP*FFQQTL
Trigger: CAGCGTCTGCTGGAAAAACAAAGGTTCCAGTTCCCG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTGTACGATCTTCATTaGCAGGTTTGCCACCTGTTG +
Preference number: 5 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLLYDLH*QVCHLL
Trigger: CAACAGGTGGCAAACCTGCAAATGAAGATCGTACAG...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTTGCCTGTGACAGGTTaGGTCTTCTCCCAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVLPVTG*VFSQSV
Trigger: GACAGACTGGGAGAAGACCAAACCTGTCACAGGCAA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCATGGGCTAACCTTGACTaGTTTGTTCAGCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPWANLD*FVQQLT
Trigger: TGTGAGCTGCTGAACAAACAAGTCAAGGTTAGCCCA...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGATGTCTGGGCTAACCTaGACTTGTTTGTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PTVSNRSTCHPPTRTNHLMSGLT*TCLFSS
Trigger: GCTGCTGAACAAACAAGTCAAGGTTAGCCCAGACAT...CAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTTCTTTGCTGATGGCCTaGGGGTCAATTATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRSLLMA*GSIMWA
Trigger: GGCCCACATAATTGACCCCAAGGCCATCAGCAAAGA...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAGCGTGCTCCAGCGCCTaGGTGACCAGGCCGTTGGAC +
Preference number: 5 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPACSSA*VTRPLD
Trigger: GTCCAACGGCCTGGTCACCAAGGCGCTGGAGCACGC...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCATAAGACCAGGGGTTaGTGTTCAGCCAGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRHKTRG*CSASQV
Trigger: CACTTGGCTGGCTGAACACAAACCCCTGGTCTTATG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAGTGGCCGCCCTGTCCTaGAGCCCCTCTGAGGACGGG +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEVAALS*SPSEDG
Trigger: CCCGTCCTCAGAGGGGCTCAAGGACAGGGCGGCCAC...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACCAGGTGCTGCTTCTaGATGGACTTCACAGCGTTC +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSTRCCF*MDFTAF
Trigger: GAACGCTGTGAAGTCCATCAAGAAGCAGCACCTGGT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCGGACCAGCTGTTAGCTaGTGCCACATACTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSGPAVS*CHILSG
Trigger: ACCAGACAGTATGTGGCACAAGCTAACAGCTGGTCC...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTGTGAGGCGGTGACATaGACTTCCAGGCAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSCEAVT*TSRQSS
Trigger: GGAACTCTGCCTGGAAGTCAATGTCACCGCCTCACA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TCGTCCTTCAGCCGGCCGAACTTCCCTTCATATATGGTGAGGGCCTaGAGAGCCTCCTCAGGACGCAGATTGCCTGTGACAGGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: SSFSRPNFPSYMVRA*RASSGRRLPVTGLV
Trigger: GACCAAACCTGTCACAGGCAATCTGCGTCCTGAGGAGGCTCTTCAGGCCCTCACCATATATGAAGGGAAGTTCGGCCGGCTGAAGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CAGCGTACTCCTCCTTGTAGCGGGCAATGCTGGCTTCCAGGTCCCTaGTCATCTGCTCCACCTCATTGGCTTTCTGCTGGTTGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: QRTPPCSGQCWLPGP*SSAPPHWLSAGCPW
Trigger: CCAAGGACAACCAGCAGAAAGCCAATGAGGTGGAGCAGATGATCAGGGACCTGGAAGCCAGCATTGCCCGCTACAAGGAGGAGTACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS TCA 90 bp GCCACCTGGAAGAGGTCCTTGGTTATGATGGAGAGGCGCTGTGTGTaGTCGGTGGCACCCTTCAGGTTGGGGTTCTCATACAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: ATWKRSLVMMERRCV*SVAPFRLGFSYSTL
Trigger: CAACGTGCTGTATGAGAACCCCAACCTGAAGGGTGCCACCGATCACACACAGCGCCTCTCCATCATAACCAAGGACCTCTTCCAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CCTGTATCAGTGTCAAAACTGACAGTGGCATGGAAACGTTTGCCGTaGTTCAGGATGTCCAGAGTCAGGAGCACCTCGGGGCTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PVSVSKLTVAWKRLP*FRMSRVRSTSGLSR
Trigger: GCGGGAGAGCCCCGAGGTGCTCCTGACTCTGGACATCCTGAAGCACGGCAAACGTTTCCATGCCACTGTCAGTTTTGACACTGATACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GTGTTGAGCTTCATTCGGAAGCTGTCTCCATCCTGCTTCAGCTTCTaGCCTTCCACGTGGTTCTCCCAGCCTTTGCCCAGGACATCCTCC +
Preference number: 5 (lower is better)
Translates to: VLSFIRKLSPSCFSF*PSTWFSQPLPRTSS
Trigger: GGAGGATGTCCTGGGCAAAGGCTGGGAGAACCACGTGGAAGGGCAGAAGCTGAAGCAGGATGGAGACAGCTTCCGAATGAAGCTCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GGTGACCAGGCCGTTGGACGTGAAGTACGGCTGCATGATCGTTGCTaGATCTCTTTGAATCTGCAGCATTGGAGAAGCGGCCTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: GDQAVGREVRLHDRC*ISLNLQHWRSGLFA
Trigger: GGCGAAGAGGCCGCTTCTCCAATGCTGCAGATTCAAAGAGATGCAGCAACGATCATGCAGCCGTACTTCACGTCCAACGGCCTGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCTTTAAATGCAGGCAGACAGCTCAACCTCACGACAGCTTCTGCCTaGTCTACGGTCAGGCCCTGGATTTTGGGGGTGGAGCCAGCACTC +
Preference number: 5 (lower is better)
Translates to: SLNAGRQLNLTTASA*STVRPWILGVEPAL
Trigger: GAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGTCGTGAGGTTGAGCTGTCTGCCTGCATTTAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CAGATCTTTAAATGCAGGCAGACAGCTCAACCTCACGACAGCTTCTaGCTGCTCTACGGTCAGGCCCTGGATTTTGGGGGTGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: QIFKCRQTAQPHDSF*LLYGQALDFGGGAS
Trigger: GCTGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGTCGTGAGGTTGAGCTGTCTGCCTGCATTTAAAGATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CGGCGAGTCTTCACTCAGAGTGAGGACTCGGAGCTGGGACGACACTaGCTTGTCTGCATCAATCACAGGAGCTCGCTTGATGAACGCCAA +
Preference number: 5 (lower is better)
Translates to: RRVFTQSEDSELGRH*LVCINHRSSLDERQ
Trigger: TTGGCGTTCATCAAGCGAGCTCCTGTGATTGATGCAGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCACTCTGAGTGAAGACTCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TTAAGGCCTGCACCTCCTTCTTTAGGCCGGCCACTAGCAGGGAAATaGTATTGCGCTCCTCCACCTTCTCACAGGTGCGCTCGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: LRPAPPSLGRPLAGK*YCAPPPSHRCARKS
Trigger: GGACTTACGAGCGCACCTGTGAGAAGGTGGAGGAGCGCAATACCATTTCCCTGCTAGTGGCCGGCCTAAAGAAGGAGGTGCAGGCCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCAACTCGTAATGCACTCCCACCTGGTACCTCTGGCTCTGGATCCTaGGCAGGGACAGCACAACCATCTTCCACGCGAACATCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: STRNALPPGTSGSGS*AGTAQPSSTRTSPG
Trigger: ACCAGGAGATGTTCGCGTGGAAGATGGTTGTGCTGTCCCTGCCCAGGATCCAGAGCCAGAGGTACCAGGTGGGAGTGCATTACGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp ACCAGGGGTTTGTGTTCAGCCAGCCAAGTGTACAGGAGAGCTTCATaGCGGACTGTATCTAAGGTTGGCACGACGACATCTGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TRGLCSASQVYRRAS*RTVSKVGTTTSGAA
Trigger: GGCAGCCCCAGATGTCGTCGTGCCAACCTTAGATACAGTCCGCCATGAAGCTCTCCTGTACACTTGGCTGGCTGAACACAAACCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TTCTTCAGCTTGTCATTGGCCGCTGCGTTCTTGACCTCCAGCTCTTaGCTCTTGATCCTCAGGTCACGGCGCAGTTCTTCCACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: FFSLSLAAAFLTSSS*LLILRSRRSSSTWS
Trigger: GGACCAGGTGGAAGAACTGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCAAAGTCTGTAACTTaGGGCTTTTCTCCGCGCTCA +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPPKSVT*GFSPRS
Trigger: TGAGCGCGGAGAAAAGCCCAAAGTTACAGACTTTGG...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCGCTCTCCCGCTTCTCTaGGATGCGGTACAACGCACG +
Preference number: 5 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLALPLL*DAVQRT
Trigger: CGTGCGTTGTACCGCATCCAAGAGAAGCGGGAGAGC...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAACCACGTTTTTGATCTaGGGCTCTCCACCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPTTFLI*GSPPGL
Trigger: CAAGCCTGGTGGAGAGCCCAAGATCAAAAACGTGGT...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAGCTCTTGGCGAGACTTaGAGATCTGGGAGTGGAATT +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPALGET*RSGSGI
Trigger: AATTCCACTCCCAGATCTCAAAGTCTCGCCAAGAGC...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTCTGACCACACACCTTaGAGGTCTTGTAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVSDHTP*RSCNSS
Trigger: GGAGGAGTTACAAGACCTCAAAGGTGTGTGGTCAGA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACCGGCGAACATTTTCTaGAAGTGCTTCTGCAACTTA +
Preference number: 5 (lower is better)
Translates to: PSHRLQPQHLSPANANQPPANIF*KCFCNL
Trigger: TAAGTTGCAGAAGCACTTCAAGAAAATGTTCGCCGG...TGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTTTGAATCTGCAGCATaGGAGAAGCGGCCTCTTCGC +
Preference number: 5 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSFESAA*EKRPLR
Trigger: GCGAAGAGGCCGCTTCTCCAATGCTGCAGATTCAAA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCTTCAGCACACACCTGTaGAAAAGGGCTGGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSFSTHL*KRAGEV
Trigger: CACCTCACCAGCCCTTTTCAACAGGTGTGTGCTGAA...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACCATTTTCTTCAGCTaGTCATTGGCCGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSTIFFS*SLAAAF
Trigger: GAACGCAGCGGCCAATGACAAGCTGAAGAAAATGGT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCATCTGCTCCACCTCATaGGCTTTCTGCTGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSICSTS*AFCWLS
Trigger: GGACAACCAGCAGAAAGCCAATGAGGTGGAGCAGAT...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGCTGCCAGGTCTGCCTaGATGGCCTGGGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSAARSA*MAWASE
Trigger: CTCTGAGGCCCAGGCCATCAAGGCAGACCTGGCAGC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCTAAACAAAGGATCCTaGATGTTCTCCACGGTGCGC +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSLNKGS*MFSTVR
Trigger: GCGCACCGTGGAGAACATCAAGGATCCTTTGTTTAG...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGCGTGCGCAGGTAGTTaGTCTGCTTCTTTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPACAGS*SASFSP
Trigger: AGGGGAAAAAGAAGCAGACAAACTACCTGCGCACGC...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GAACTCAGGTCTCTGGAGATGGCCTCCACGAGACGCAGGGCCCGCTaGATCGGGTACTTCGTGTTGCGGATCTTTCTCAGATGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: ELRSLEMASTRRRAR*IGYFVLRIFLRCVK
Trigger: TTTCACACATCTGAGAAAGATCCGCAACACGAAGTACCCGATTCAGCGGGCCCTGCGTCTCGTGGAGGCCATCTCCAGAGACCTGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GCTGCTGAACCTTCCTCGCCCAGTCATCGAAGATCTCCTGGGTGTTaGGCTTCATTCGGAAGCTGTCTCCATCCTGCTTCAGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: AAEPSSPSHRRSPGC*ASFGSCLHPASASA
Trigger: GGCAGAAGCTGAAGCAGGATGGAGACAGCTTCCGAATGAAGCTCAACACCCAGGAGATCTTCGATGACTGGGCGAGGAAGGTTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp ATTCTTCCAAGGCCATCTCGCCTTGTGCCACCAGCAGCACATCCTTaGCGACAGCTTCGTTCTTCTGAAGGTCCACGTCCCAGATCTGGC +
Preference number: 5 (lower is better)
Translates to: ILPRPSRLVPPAAHP*RQLRSSEGPRPRSG
Trigger: GCCAGATCTGGGACGTGGACCTTCAGAAGAACGAAGCTGTCGTCAAGGATGTGCTGCTGGTGGCACAAGGCGAGATGGCCTTGGAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AAGATCTCCTGGGTGTTGAGCTTCATTCGGAAGCTGTCTCCATCCTaGTTCAGCTTCTGCCCTTCCACGTGGTTCTCCCAGCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: KISWVLSFIRKLSPS*FSFCPSTWFSQPLP
Trigger: GGGCAAAGGCTGGGAGAACCACGTGGAAGGGCAGAAGCTGAAGCAGGATGGAGACAGCTTCCGAATGAAGCTCAACACCCAGGAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCAGCTTGTCCAAGAAGAACCTGGGTCCAAGCTCGAAGGCCAGCTTaGAGGCGGACGCCCAGTATCCTTTCAATCTCCATGTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SACPRRTWVQARRPA*RRTPSILSISMSSL
Trigger: CAAGCTGGACATGGAGATTGAAAGGATACTGGGCGTCCGCCTGCAAGCTGGCCTTCGAGCTTGGACCCAGGTTCTTCTTGGACAAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GTAGGACTCTTCCAGGGCGACAGGGCCGTCGGGCATCCTTGTCAGTaGATTCCGATAGAACTTCTCTTCCTCCGTCAACTCGTAATGCAC +
Preference number: 5 (lower is better)
Translates to: VGLFQGDRAVGHPCQ*IPIELLFLRQLVMH
Trigger: GTGCATTACGAGTTGACGGAGGAAGAGAAGTTCTATCGGAATGCACTGACAAGGATGCCCGACGGCCCTGTCGCCCTGGAAGAGTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GTGATGAAGGTCACCGCGTCAGAGGTACTGGCTGTGTCAACGGAGTaGTGCTCCAGCTCTTGGCGAGACTTTGAGATCTGGGAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: VMKVTASEVLAVSTE*CSSSWRDFEIWEWN
Trigger: ATTCCACTCCCAGATCTCAAAGTCTCGCCAAGAGCTGGAGCAGCACTCCGTTGACACAGCCAGTACCTCTGACGCGGTGACCTTCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGGAAACACGTCAGACAGGAGGCTGAAGAGCAGCGGGATATCTTCTaGCACCAGCTTGGGCACCATTGTCTCGCAGACACTCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: RKHVRQEAEEQRDIF*HQLGHHCLADTLDQ
Trigger: CTGATCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAGATATCCCGCTGCTCTTCAGCCTCCTGTCTGACGTGTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ATGCCACAGCGAGACACCGTGGCCAGCGTCGCGTATTTCAAGTCCTaGACTTCAAACATTATTCGCACATTGGGAGGCAGGCTAAGGCGC +
Preference number: 5 (lower is better)
Translates to: MPQRDTVASVAYFKS*TSNIIRTLGGRLRR
Trigger: GCGCCTTAGCCTGCCTCCCAATGTGCGAATAATGTTTGAAGTGCAGGACTTGAAATACGCGACGCTGGCCACGGTGTCTCGCTGTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ACGATGGTGGGGATGAAGTTCTCTCTCATGATGATGGAGCGGATCTaGTTCCAGTCCGTGGTGCTCTCACCAAGCAGCAGGCAGATGGAC +
Preference number: 5 (lower is better)
Translates to: TMVGMKFSLMMMERI*FQSVVLSPSSRQMD
Trigger: GTCCATCTGCCTGCTGCTTGGTGAGAGCACCACGGACTGGAAGCAGATCCGCTCCATCATCATGAGAGAGAACTTCATCCCCACCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS GCA 90 bp AGCACTCAGCACAATCTCCTTCCCTCTGAGGAAGTGCTGGAACTCTaGATCATAGGTGGGCTCCCCCACGGTGCCTTTCAGCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: STQHNLLPSEEVLEL*IIGGLPHGAFQLDP
Trigger: AGGATCAAGCTGAAAGGCACCGTGGGGGAGCCCACCTATGATGCAGAGTTCCAGCACTTCCTCAGAGGGAAGGAGATTGTGCTGAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AAGCCTTCTGCTGAGCCGATGGCAATAGACGTGATCTGCGTGTTCTaGTCTGCTGCGAGGTCCTCAACATGTCCGCTGGCATCATACCCA +
Preference number: 5 (lower is better)
Translates to: KPSAEPMAIDVICVF*SAARSSTCPLASYP
Trigger: TGGGTATGATGCCAGCGGACATGTTGAGGACCTCGCAGCAGAGCAGAACACGCAGATCACGTCTATTGCCATCGGCTCAGCAGAAGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AGTGTCTCATACGGCGAGTCTTCACTCAGAGTGAGGACTCGGAGCTaGGACGACACTGGCTTGTCTGCATCAATCACAGGAGCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: SVSYGESSLRVRTRS*DDTGLSASITGARL
Trigger: CAAGCGAGCTCCTGTGATTGATGCAGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCACTCTGAGTGAAGACTCGCCGTATGAGACACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TTGGCGTCGGCAGCATCAAAGAGCACCTCGGCCACTTTCATGTCTTaGGGTTCAGGTGCTTCTCCTTGGTTCTGTTGTGCGACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LASAASKSTSATFMS*GSGASPWFCCATAV
Trigger: CACAGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAACCCCAAGACATGAAAGTGGCCGAGGTGCTCTTTGATGCTGCCGACGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GATGCTGCTAAATGTCCTCAGCATGTTGGCTTTCACTCCGGGTGGTaGCTCAAACACAAAGATCCGACCAGCACGGAGCAGGTTCACGGG +
Preference number: 5 (lower is better)
Translates to: DAAKCPQHVGFHSGW*LKHKDPTSTEQVHG
Trigger: CCCGTGAACCTGCTCCGTGCTGGTCGGATCTTTGTGTTTGAGCCACCACCCGGAGTGAAAGCCAACATGCTGAGGACATTTAGCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCCAGCATCTGCATCTTCAGCATCTTGCTGATCATGTCCACGCCTTaGGTGGTAAGCAGGACCCTTTCAGCATTGTTGGGGAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SSICIFSILLIMSTP*VVSRTLSALLGRPS
Trigger: GCTGGGCCTCCCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGTGGACATGATCAGCAAGATGCTGAAGATGCAGATGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCACCTCCTCAATGGCGTaGGCGTCGGCAGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLTSSMA*ASAASK
Trigger: CTTTGATGCTGCCGACGCCAACGCCATTGAGGAGGT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACATCTCTGAGAATGTCTaGTGGTCATACATGCAGGTT +
Preference number: 5 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHISENV*WSYMQV
Trigger: AACCTGCATGTATGACCACAAGACATTCTCAGAGAT...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAAGGCTTGTGACTGACTaGTGGAGCATCTGTATCCAT +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPRLVTD*WSICIH
Trigger: ATGGATACAGATGCTCCACAAGTCAGTCACAAGCCT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTCTTCATTTGCAGGTTaGCCACCTGTTGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVSSFAG*PPVAEW
Trigger: CCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTAGAGTGAGCCACTCATaGATTTTGGGGTGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRRVSHS*ILGCSV
Trigger: CACTGAACACCCCAAAATCAATGAGTGGCTCACTCT...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTCCTGGCCTCCAAAGCTaGTGTCATTGTCAAATAGCA +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRPGLQS*CHCQIA
Trigger: TGCTATTTGACAATGACACAAGCTTTGGAGGCCAGG...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTGCTCCTGGATTTCTaGGCTCATGACCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVLLLDF*AHDLLL
Trigger: AAGAAGAAGGTCATGAGCCAAGAAATCCAGGAGCAG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTTTATCCAGGTCCTCCTaGACACTCATCTGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRLSRSS*TLICLS
Trigger: AGACAAGCAGATGAGTGTCAAGGAGGACCTGGATAA...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCAAATTCGTACTTCTTaGACCACCCCAGTGGAGCAT +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSQIRTS*TTPVEH
Trigger: ATGCTCCACTGGGGTGGTCAAAGAAGTACGAATTTG...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCAGGACCCTTTCAGCATaGTTGGGGAGGCCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLRTLSA*LGRPSH
Trigger: ATGGCTGGGCCTCCCCAACAATGCTGAAAGGGTCCT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGCTGCACGTGGCCCCTaGGAGCTTCAGACCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLAARGP*ELQTCD
Trigger: GTCACAGGTCTGAAGCTCCAAGGGGCCACGTGCAGC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CTGTCCTCCTGTACGATCTTCATTTGCAGGTTTGCCACCTGTTGCTaGATGGCAGAGTCCTTCCGCCGCATGATGTCATTGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LSSCTIFICRFATCC*MAESFRRMMSLKAP
Trigger: GGGGGCCTTCAATGACATCATGCGGCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGATCGTACAGGAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp AGACCCAGCGCCTCTGCACGTCAATCCACACGTCAAAGAGAGCCATaGTTCGGTTCAGCTTGTCCTCCCAGCTCAGGGCATCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: RPSASARQSTRQREP*FGSACPPSSGHLLQ
Trigger: TTGAAGAAGATGCCCTGAGCTGGGAGGACAAGCTGAACCGAATCATGGCTCTCTTTGACGTGTGGATTGACGTGCAGAGGCGCTGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGCATCAAAGAGCACCTCGGCCACTTTCATGTCTTGGGGTTCAGGTaGTTCTCCTTGGTTCTGTTGTGCGACTGCTGTGACCTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SIKEHLGHFHVLGFR*FSLVLLCDCCDLWP
Trigger: AGGCCACAGGTCACAGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAACCCCAAGACATGAAAGTGGCCGAGGTGCTCTTTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GGCAAATGGGTAGAGCTGGTTGGCTTGGTGAGCCTTGTTCACAATTaGAAGTGGCACTCGGAAGCCAAGCCACTTGAGGTTCCGGACTTC +
Preference number: 5 (lower is better)
Translates to: GKWVELVGLVSLVHN*KWHSEAKPLEVPDF
Trigger: GAAGTCCGGAACCTCAAGTGGCTTGGCTTCCGAGTGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CCACTAGCAGGGAAATGGTATTGCGCTCCTCCACCTTCTCACAGGTaGGCTCGTAAGTCCGGACGCTTTCAATCAGCGAGATGGCAAATG +
Preference number: 5 (lower is better)
Translates to: PLAGKWYCAPPPSHR*ARKSGRFQSARWQM
Trigger: CATTTGCCATCTCGCTGATTGAAAGCGTCCGGACTTACGAGCGCACCTGTGAGAAGGTGGAGGAGCGCAATACCATTTCCCTGCTAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ATGAAGGTCACCGCGTCAGAGGTACTGGCTGTGTCAACGGAGTGCTaGTCCAGCTCTTGGCGAGACTTTGAGATCTGGGAGTGGAATTCT +
Preference number: 5 (lower is better)
Translates to: MKVTASEVLAVSTEC*SSSWRDFEIWEWNS
Trigger: AGAATTCCACTCCCAGATCTCAAAGTCTCGCCAAGAGCTGGAGCAGCACTCCGTTGACACAGCCAGTACCTCTGACGCGGTGACCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ACTGAGGAGGCCTGTGTCTGTGAGTTCCAACGCTTCCTTAGCCTTTaGACATTTCTCTCTGTCGTCCTTCAGCCGGCCGAACTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: TEEACVCEFQRFLSL*TFLSVVLQPAELPF
Trigger: GAAGGGAAGTTCGGCCGGCTGAAGGACGACAGAGAGAAATGTGCAAAGGCTAAGGAAGCGTTGGAACTCACAGACACAGGCCTCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CTTGGTGACCAGGCCGTTGGACGTGAAGTACGGCTGCATGATCGTTaGTGCATCTCTTTGAATCTGCAGCATTGGAGAAGCGGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LGDQAVGREVRLHDR*CISLNLQHWRSGLF
Trigger: GAAGAGGCCGCTTCTCCAATGCTGCAGATTCAAAGAGATGCAGCAACGATCATGCAGCCGTACTTCACGTCCAACGGCCTGGTCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCCACGGTCTCTTTGATTTTTCGGAGCCCAACATTCAGGTGCATCTaGTGCTCCTCCAACTCGCTGCGCTTCTCATGGAAGAGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: STVSLIFRSPTFRCI*CSSNSLRFSWKRLA
Trigger: CGCCAACCTCTTCCATGAGAAGCGCAGCGAGTTGGAGGAGCAGCAGATGCACCTGAATGTTGGGCTCCGAAAAATCAAAGAGACCGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ACCTGGTCCACGGTCTCTTTGATTTTTCGGAGCCCAACATTCAGGTaGATCTGCTGCTCCTCCAACTCGCTGCGCTTCTCATGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TWSTVSLIFRSPTFR*ICCSSNSLRFSWKR
Trigger: CCTCTTCCATGAGAAGCGCAGCGAGTTGGAGGAGCAGCAGATGCACCTGAATGTTGGGCTCCGAAAAATCAAAGAGACCGTGGACCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AGGATGTCCAGAGTCAGGAGCACCTCGGGGCTCTCCCGCTTCTCTTaGATGCGGTACAACGCACGTTCCAAGTTTAGCCAAAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: RMSRVRSTSGLSRFS*MRYNARSKFSQKLI
Trigger: AATCAGCTTTTGGCTAAACTTGGAACGTGCGTTGTACCGCATCCAAGAGAAGCGGGAGAGCCCCGAGGTGCTCCTGACTCTGGACATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TTGTCGTGCAGAGATTCGATGTCATCTTTCACACGTTGGATCAGCTaGGTCTGGTATTCACGAATGGCCCCTCGGATGTGTGGGCGGACG +
Preference number: 5 (lower is better)
Translates to: LSCRDSMSSFTRWIS*VWYSRMAPRMCGRT
Trigger: CGTCCGCCCACACATCCGAGGGGCCATTCGTGAATACCAGACCCAGCTGATCCAACGTGTGAAAGATGACATCGAATCTCTGCACGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AAACCAGATAGCGCTGAATGTAGCGCTCCAGCTGCTCAATCTGCATaGGGAAATCAGGATGGTTGGCATTGTACTGCGCCACGTTGCGGC +
Preference number: 5 (lower is better)
Translates to: KPDSAECSAPAAQSA*GNQDGWHCTAPRCG
Trigger: GCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGATTGAGCAGCTGGAGCGCTACATTCAGCGCTATCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CTGCTCTCATCTTCAGCCGGCTGTCTCCAGATAAGGACCAGAGGATaGCGTAAACCAGATAGCGCTGAATGTAGCGCTCCAGCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: LLSSSAGCLQIRTRG*RKPDSAECSAPAAQ
Trigger: TTGAGCAGCTGGAGCGCTACATTCAGCGCTATCTGGTTTACGCCATCCTCTGGTCCTTATCTGGAGACAGCCGGCTGAAGATGAGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CGTGGCGCAAGAACCTGTGTGAGAGGGGCTTTCTCCCAGGGTCAGTaGGTGGATTGCAAGCCCCAACAAACTGGATTCTCTCTAGCTTTA +
Preference number: 5 (lower is better)
Translates to: RGARTCVRGAFSQGQ*VDCKPQQTGFSLAL
Trigger: TAAAGCTAGAGAGAATCCAGTTTGTTGGGGCTTGCAATCCACCCACTGACCCTGGGAGAAAGCCCCTCTCACACAGGTTCTTGCGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GGCGCGGTTAAAAGTGCCATAGATTTGCGTCAGGGAGGCTGGTCCTaGGTAATCCACATATACAACAGGCACGTGGCGCAAGAACCTGTG +
Preference number: 5 (lower is better)
Translates to: GAVKSAIDLRQGGWS*VIHIYNRHVAQEPV
Trigger: CACAGGTTCTTGCGCCACGTGCCTGTTGTATATGTGGATTACCCAGGACCAGCCTCCCTGACGCAAATCTATGGCACTTTTAACCGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GCTTCCAGGTCCCTGATCATCTGCTCCACCTCATTGGCTTTCTGCTaGTTGTCCTTGGCGTCATCTTCCAGCTTCTGCAGCTCATTCCTC +
Preference number: 5 (lower is better)
Translates to: ASRSLIICSTSLAFC*LSLASSSSFCSSFL
Trigger: GAGGAATGAGCTGCAGAAGCTGGAAGATGACGCCAAGGACAACCAGCAGAAAGCCAATGAGGTGGAGCAGATGATCAGGGACCTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CCA 90 bp GGTGACGGTGAAGTTCACAAAGGTCACCCGGGAGCAGAGGTCTGGTaGGAACTCCACAGTTGGGTCTCGGGTAGACAGAAAGATGACAAA +
Preference number: 5 (lower is better)
Translates to: GDGEVHKGHPGAEVW*ELHSWVSGRQKDDK
Trigger: TTTGTCATCTTTCTGTCTACCCGAGACCCAACTGTGGAGTTCCCACCAGACCTCTGCTCCCGGGTGACCTTTGTGAACTTCACCGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CCA 90 bp TTCAGAGCTTGGAGCAGAGACTTTTCAAGCTGCCGTAAACGGAGTTaGAACTCCCCTTGCAGTTTCAGGAGGTCGGAGCGCTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: FRAWSRDFSSCRKRS*NSPCSFRRSERFSS
Trigger: GGACGAGAAGCGCTCCGACCTCCTGAAACTGCAAGGGGAGTTCCAACTCCGTTTACGGCAGCTTGAAAAGTCTCTGCTCCAAGCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AGGGATGCTGCTAAATGTCCTCAGCATGTTGGCTTTCACTCCGGGTaGTGGCTCAAACACAAAGATCCGACCAGCACGGAGCAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: RDAAKCPQHVGFHSG*WLKHKDPTSTEQVH
Trigger: GTGAACCTGCTCCGTGCTGGTCGGATCTTTGTGTTTGAGCCACCACCCGGAGTGAAAGCCAACATGCTGAGGACATTTAGCAGCATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCCACCCACTGCACAAACTCCTCTCGCCTGATACCATCAGGCATCTaGATGTCCTTGTGCCCGTCAACCTTGCACGCCAGCTTGAATTCA +
Preference number: 5 (lower is better)
Translates to: STHCTNSSRLIPSGI*MSLCPSTLHASLNS
Trigger: TGAATTCAAGCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGATGGTATCAGGCGAGAGGAGTTTGTGCAGTGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp ATGGCATTGGAGAGTGATAGCTTGTTGTTGCTGCACGTGGCCCCTTaGAGCTTCAGACCTGTGACTCCAAAGCTGCAGGCATCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: MALESDSLLLLHVAP*SFRPVTPKLQASRV
Trigger: CACCCTTGATGCCTGCAGCTTTGGAGTCACAGGTCTGAAGCTCCAAGGGGCCACGTGCAGCAACAACAAGCTATCACTCTCCAATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTAGGGCCTGCCTTATCTaGTCCAGCTCCGTGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSRACLI*SSSVAD
Trigger: GTCTGCCACGGAGCTGGACAAGATAAGGCAGGCCCT...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATTTACAAGCTTGGCTTaGCGGGTACTGGACCTTGAA +
Preference number: 5 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPFTSLA*RVLDLE
Trigger: TTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAAA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTAGGTTCCGGACTTCTTaGGAGAGTGTTATGATCTCT +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRRFRTS*ESVMIS
Trigger: AGAGATCATAACACTCTCCAAAGAAGTCCGGAACCT...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCCTTCCGTTTCAGAGATaGCACATAGGTGATGAAGGT +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSLPFQR*HIGDEG
Trigger: ACCTTCATCACCTATGTGCAATCTCTGAAACGGAAG...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCAAGGCCATCTCGCCTaGTGCCACCAGCAGCACATC +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSQGHLA*CHQQHI
Trigger: GATGTGCTGCTGGTGGCACAAGGCGAGATGGCCTTG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAATATGCTCCTTGACCTaGTTGAAGAGGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPICSLT*LKRSSQ
Trigger: CTGGGATGACCTCTTCAACAAGGTCAAGGAGCATAT...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCTGTTGATATGCTCCTaGACCTTGTTGAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVLLICS*TLLKRS
Trigger: TGACCTCTTCAACAAGGTCAAGGAGCATATCAACAG...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCTTGTCGATCTTGCTTTaGATCAAGGACCTGGTAACG +
Preference number: 5 (lower is better)
Translates to: PTAAPVTRQREPTTCFPVLSILL*IKDLVT
Trigger: CGTTACCAGGTCCTTGATCAAAAGCAAGATCGACAA...GACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTTTGGTGACCAGGCCGTaGGACGTGAAGTACGGCTGC +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLLVTRP*DVKYGC
Trigger: GCAGCCGTACTTCACGTCCAACGGCCTGGTCACCAA...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATTGGCCGCTGCGTTCTaGACCTCCAGCTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPLAAAF*TSSSWL
Trigger: GAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCTCCTCAGCCGAGAAGTaGACGATGGTGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLSSAEK*TMVGMK
Trigger: CTTCATCCCCACCATCGTCAACTTCTCGGCTGAGGA...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTACCTCATTCAGAGCTaGGAGCAGAGACTTTTCAAG +
Preference number: 5 (lower is better)
Translates to: LQPQHLSPANANQPLAFQYLIQS*EQRLFK
Trigger: CTTGAAAAGTCTCTGCTCCAAGCTCTGAATGAGGTA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAGTCGGGTCGGAAGGCTaGAATCAGGAGCAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEVGSEG*NQEQAV
Trigger: CACCGCCTGCTCCTGATTCAAGCCTTCCGACCCGAC...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCGACTTCACGGCGGTGTaGATGGCCTTATCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLDFTAV*MALSAW
Trigger: CCAAGCAGATAAGGCCATCAACACCGCCGTGAAGTC...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAATGTTCTGCCGGCCCTaGGCTGTGTCGTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEMFCRP*AVSSSH
Trigger: GTGGCTGGACGACACAGCCAAGGGCCGGCAGAACAT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCCACATCTTGGAGTAACTaGGCCCCCATCTTTACTTCT +
Preference number: 5 (lower is better)
Translates to: QPQHLSPANANQPLAFQSTSWSN*APIFTS
Trigger: AGAAGTAAAGATGGGGGCCAAGTTACTCCAAGATGT...GGACTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp ACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCAATGTTCTGCAGCTGTTaGATCCTCTCGCTGAAATCT +
Preference number: 5 (lower is better)
Translates to: TQPFGQPSDSALFSSPIPMFCSC*ILSLKS
Trigger: AGATTTCAGCGAGAGGATCAAACAGCTGCAGAACAT...TGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp ACTCTTCATAGGCTACATGCATCAACTTCCGAGTGCCCAAGACCTTaGGCAGCTGAGAACTCAGGTCTCTGGAGATGGCCTCCACGAGAC +
Preference number: 5 (lower is better)
Translates to: TLHRLHASTSECPRP*AAENSGLWRWPPRD
Trigger: GTCTCGTGGAGGCCATCTCCAGAGACCTGAGTTCTCAGCTGCTCAAGGTCTTGGGCACTCGGAAGTTGATGCATGTAGCCTATGAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp AGGCTTCCGTCCCTTCTTTGGAAACATCCAGACCATCGACTTCCTTaGCATTCTCGTAGGCCAGGTTCACCTCCTCAATGGCGTTGGCGT +
Preference number: 5 (lower is better)
Translates to: RLPSLLWKHPDHRLP*HSRRPGSPPQWRWR
Trigger: ACGCCAACGCCATTGAGGAGGTGAACCTGGCCTACGAGAATGTCAAGGAAGTCGATGGTCTGGATGTTTCCAAAGAAGGGACGGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GCAGGCGGACGCCCAGTATCCTTTCAATCTCCATGTCCAGCTTGTTaGCCCAGATGGGCAGATTGGAATAGGAGTGCAGGTTTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: AGGRPVSFQSPCPAC*PRWADWNRSAGLGR
Trigger: ACGACCTAAACCTGCACTCCTATTCCAATCTGCCCATCTGGGTCAACAAGCTGGACATGGAGATTGAAAGGATACTGGGCGTCCGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TCCCAGATCTGGCCCAGCGTCAGCTCAGAAACCACCCAGTTAACATaGAGCCTCTTCATCAGCTGTTTCCAGTGCCGGTCTTTGAGTGCT +
Preference number: 5 (lower is better)
Translates to: SQIWPSVSSETTQLT*SLFISCFQCRSLSA
Trigger: AGCACTCAAAGACCGGCACTGGAAACAGCTGATGAAGAGGCTTCATGTTAACTGGGTGGTTTCTGAGCTGACGCTGGGCCAGATCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TCAAAGGTTTCGTCACAGTTGAAAACTAAGACGAACCGCCCCAGCTaGTGGCCGAGGGCTTTGACGGACTCTGTCTTTCCGGTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SKVSSQLKTKTNRPS*WPRALTDSVFPVPA
Trigger: TGCTGGAACCGGAAAGACAGAGTCCGTCAAAGCCCTCGGCCATCAGCTGGGGCGGTTCGTCTTAGTTTTCAACTGTGACGAAACCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GCTTTCCACAGCTCTGTCCTCCTGTACGATCTTCATTTGCAGGTTTaGCACCTGTTGCTGAATGGCAGAGTCCTTCCGCCGCATGATGTC +
Preference number: 5 (lower is better)
Translates to: AFHSSVLLYDLHLQV*HLLLNGRVLPPHDV
Trigger: GACATCATGCGGCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGATCGTACAGGAGGACAGAGCTGTGGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CTCATCCTCCACAAGCCTGTCTTGGAAGAGACGGAGGGCTTCATGTaGCCAAATACGAATGAGACCTTCAACAGGCAATGTCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LILHKPVLEETEGFM*PNTNETFNRQCLQG
Trigger: CCCCTGGAGACATTGCCTGTTGAAGGTCTCATTCGTATTTGGGCACATGAAGCCCTCCGTCTCTTCCAAGACAGGCTTGTGGAGGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ATGGGAGTTGTAGGCGTTTCCTCGCTCCAGAGGTATGGCACGGTCTaGTCTGGTGAACTGCTATCCAGCCAAATGCCAAACTGCTCATCT +
Preference number: 5 (lower is better)
Translates to: MGVVGVSSLQRYGTV*SGELLSSQMPNCSS
Trigger: AGATGAGCAGTTTGGCATTTGGCTGGATAGCAGTTCACCAGAGCAGACCGTGCCATACCTCTGGAGCGAGGAAACGCCTACAACTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTTGGCTTCACCTCTGTGCCCACAATGTGGGTGAGGTCGAGAGGCTaGTCCATGATGGACATGAAGGACTCTCCGAGGTTTGTGGAAACA +
Preference number: 5 (lower is better)
Translates to: FGFTSVPTMWVRSRG*SMMDMKDSPRFVET
Trigger: TGTTTCCACAAACCTCGGAGAGTCCTTCATGTCCATCATGGAGCAGCCTCTCGACCTCACCCACATTGTGGGCACAGAGGTGAAGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ACAAACTCCTCTCGCCTGATACCATCAGGCATCTGGATGTCCTTGTaGCCGTCAACCTTGCACGCCAGCTTGAATTCACTGTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TNSSRLIPSGIWMSL*PSTLHASLNSLSKL
Trigger: CAGCTTCGACAGTGAATTCAAGCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGATGGTATCAGGCGAGAGGAGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TGCAGAGATTCGATGTCATCTTTCACACGTTGGATCAGCTGGGTCTaGTATTCACGAATGGCCCCTCGGATGTGTGGGCGGACGAACAGT +
Preference number: 5 (lower is better)
Translates to: CRDSMSSFTRWISWV*YSRMAPRMCGRTNS
Trigger: ACTGTTCGTCCGCCCACACATCCGAGGGGCCATTCGTGAATACCAGACCCAGCTGATCCAACGTGTGAAAGATGACATCGAATCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TGGGTAGAGCTGGTTGGCTTGGTGAGCCTTGTTCACAATTGCAAGTaGCACTCGGAAGCCAAGCCACTTGAGGTTCCGGACTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: WVELVGLVSLVHNCK*HSEAKPLEVPDFFG
Trigger: TCCAAAGAAGTCCGGAACCTCAAGTGGCTTGGCTTCCGAGTGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCCGGACGCTTTCAATCAGCGAGATGGCAAATGGGTAGAGCTGGTTaGCTTGGTGAGCCTTGTTCACAATTGCAAGTGGCACTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGRFQSARWQMGRAG*LGEPCSQLQVALGS
Trigger: GCTTCCGAGTGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAAGCGTCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GGTGCGCTCGTAAGTCCGGACGCTTTCAATCAGCGAGATGGCAAATaGGTAGAGCTGGTTGGCTTGGTGAGCCTTGTTCACAATTGCAAG +
Preference number: 5 (lower is better)
Translates to: GALVSPDAFNQRDGK*VELVGLVSLVHNCK
Trigger: CTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAAGCGTCCGGACTTACGAGCGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCTCACAGGTGCGCTCGTAAGTCCGGACGCTTTCAATCAGCGAGATaGCAAATGGGTAGAGCTGGTTGGCTTGGTGAGCCTTGTTCACAA +
Preference number: 5 (lower is better)
Translates to: SHRCARKSGRFQSAR*QMGRAGWLGEPCSQ
Trigger: TTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAAGCGTCCGGACTTACGAGCGCACCTGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CAGCATGGCGCGGTTAAAAGTGCCATAGATTTGCGTCAGGGAGGCTaGTCCTGGGTAATCCACATATACAACAGGCACGTGGCGCAAGAA +
Preference number: 5 (lower is better)
Translates to: QHGAVKSAIDLRQGG*SWVIHIYNRHVAQE
Trigger: TTCTTGCGCCACGTGCCTGTTGTATATGTGGATTACCCAGGACCAGCCTCCCTGACGCAAATCTATGGCACTTTTAACCGCGCCATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GGCTTCCCGGTGTGTTGGGGGCTGCGGCAGTTTATCATACACAACTaGCATGTAGTCAGGCACTATATAGTTCGGCTTCTCCAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: GFPVCWGLRQFIIHN*HVVRHYIVRLLQVH
Trigger: ATGGACCTGGAGAAGCCGAACTATATAGTGCCTGACTACATGCCAGTTGTGTATGATAAACTGCCGCAGCCCCCAACACACCGGGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CGGGTAGACAGAAAGATGACAAAGGATGGTGACAGGTCTATGTCTTaGTCACCGAGGGTAATCAGCACCCTCCCTCCTGTTCGCCGAACT +
Preference number: 5 (lower is better)
Translates to: RVDRKMTKDGDRSMS*SPRVISTLPPVRRT
Trigger: AGTTCGGCGAACAGGAGGGAGGGTGCTGATTACCCTCGGTGACCAAGACATAGACCTGTCACCATCCTTTGTCATCTTTCTGTCTACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS-3UTR CAA 90 bp AGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCCACCGTGCGGTAGAGTTCAACTaGCTTCTCAAACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: SHSVSPRTAHSSLLPSHRAVEFN*LLKLFD
Trigger: ATCAAACAGTTTGAGAAGCAAGTTGAACTCTACCGC...ACGGTGGGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CATCCCACCGTCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACCTTCATTTGATCAATTaGTTCCCAGACCTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: HPTVSNRSTCHPPTRTNHLHLIN*FPDLRK
Trigger: CTTTCTAAGGTCTGGGAACAAATTGATCAAATGAAG...GTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGACGGTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAGTCGAAAGATTTGGCGTaGTCGATCTTGCTTTTGATC +
Preference number: 5 (lower is better)
Translates to: LQPQHLSPANANQPLAFQSKDLA*SILLLI
Trigger: GATCAAAAGCAAGATCGACAACGCCAAATCTTTCGA...CTGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGGCAGCGTCAGGAGCTaGTTGTCATCCAGCACGGAG +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGGSVRS*LSSSTE
Trigger: CTCCGTGCTGGATGACAACAAGCTCCTGACGCTGCC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTTCAGGATGGTTGGCATaGTACTGCGCCACGTTGCGG +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLSGWLA*YCATLR
Trigger: CCGCAACGTGGCGCAGTACAATGCCAACCATCCTGA...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAACGCTCCAGGAAGGTGTaGAGCAGACGCTGGTCGAAC +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDERSRKV*SRRWSN
Trigger: GTTCGACCAGCGTCTGCTCAACACCTTCCTGGAGCG...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAATGAGGTGCAGCCAGTaGGACGCCGTGGTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEMRCSQ*DAVVCS
Trigger: ACTGCACACCACGGCGTCCAACTGGCTGCACCTCAT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CCCGCTGAATCGGGTACTTCGTGTTGCGGATCTTTCTCAGATGTGTaGAAATTGCAACAAGGGCCTGCCTTATCTTGTCCAGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: PAESGTSCCGSFSDV*KLQQGPALSCPAPW
Trigger: CCACGGAGCTGGACAAGATAAGGCAGGCCCTTGTTGCAATTTTCACACATCTGAGAAAGATCCGCAACACGAAGTACCCGATTCAGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GCCTGGCCTCCAAAGCTTGTGTCATTGTCAAATAGCAACGGTCAGTaGGGGGCGTCTGAACCAGCTTGTCTTGAACACCCAGGTACTCAA +
Preference number: 5 (lower is better)
Translates to: AWPPKLVSLSNSNGQ*GASEPACLEHPGTQ
Trigger: TTGAGTACCTGGGTGTTCAAGACAAGCTGGTTCAGACGCCCCTCACTGACCGTTGCTATTTGACAATGACACAAGCTTTGGAGGCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GCCTGTCTTGGAAGAGACGGAGGGCTTCATGTGCCCAAATACGAATaGGACCTTCAACAGGCAATGTCTCCAGGGGTCTCAGTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: ACLGRDGGLHVPKYE*DLQQAMSPGVSVLQ
Trigger: TTGAAGCACTGAGACCCCTGGAGACATTGCCTGTTGAAGGTCTCATTCGTATTTGGGCACATGAAGCCCTCCGTCTCTTCCAAGACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ATGCGGTACAACGCACGTTCCAAGTTTAGCCAAAAGCTGATTTCCTaGAAGGCAGTTCCTGATGCTGGATCCCGGTCAAGCTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: MRYNARSKFSQKLIS*KAVPDAGSRSSLVT
Trigger: GGTGACCAAGCTTGACCGGGATCCAGCATCAGGAACTGCCTTGCAGGAAATCAGCTTTTGGCTAAACTTGGAACGTGCGTTGTACCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGAACCTGTGTGAGAGGGGCTTTCTCCCAGGGTCAGTGGGTGGATTaGAAGCCCCAACAAACTGGATTCTCTCTAGCTTTACCCACGTTT +
Preference number: 5 (lower is better)
Translates to: RTCVRGAFSQGQWVD*KPQQTGFSLALPTF
Trigger: AAACGTGGGTAAAGCTAGAGAGAATCCAGTTTGTTGGGGCTTGCAATCCACCCACTGACCCTGGGAGAAAGCCCCTCTCACACAGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CTCTTGCTGGTCTTTCACCATTTTCTTCAGCTTGTCATTGGCCGCTaGGTTCTTGACCTCCAGCTCTTGGCTCTTGATCCTCAGGTCACG +
Preference number: 5 (lower is better)
Translates to: LLLVFHHFLQLVIGR*VLDLQLLALDPQVT
Trigger: CGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAAAATGGTGAAAGACCAGCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCATTGGCTTTCTGCTGGTTGTCCTTGGCGTCATCTTCCAGCTTCTaGAGCTCATTCCTCAGGGGCTCCACTCGCTTTAACATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: SLAFCWLSLASSSSF*SSFLRGSTRFNMSA
Trigger: TGCAGACATGTTAAAGCGAGTGGAGCCCCTGAGGAATGAGCTGCAGAAGCTGGAAGATGACGCCAAGGACAACCAGCAGAAAGCCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS GCA 90 bp GGCACGGTCTGCTCTGGTGAACTGCTATCCAGCCAAATGCCAAACTaGTCATCTGCCTGCACCTTGGCAATCAGATCTTTAAATGCAGGC +
Preference number: 5 (lower is better)
Translates to: GTVCSGELLSSQMPN*SSACTLAIRSLNAG
Trigger: GCCTGCATTTAAAGATCTGATTGCCAAGGTGCAGGCAGATGAGCAGTTTGGCATTTGGCTGGATAGCAGTTCACCAGAGCAGACCGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ATTGACTTCCAGGCAGAGTTCCTCCAGGGACCAGCTGTTAGCTTGTaGCACATACTGTCTGGTGGCAGTGATGTAGGCCTCAGGTACAAA +
Preference number: 5 (lower is better)
Translates to: IDFQAEFLQGPAVSL*HILSGGSDVGLRYK
Trigger: TTTGTACCTGAGGCCTACATCACTGCCACCAGACAGTATGTGGCACAAGCTAACAGCTGGTCCCTGGAGGAACTCTGCCTGGAAGTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp GCGCTCATAGCACTGCTTCGCAACGTTCGTGATGATGGGATGAATTaGCAAGCTGATCTCTGGGATCTCAATGTTCTGCTGCAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ALIALLRNVRDDGMN*QADLWDLNVLLQVE
Trigger: CTCCACCTGCAGCAGAACATTGAGATCCCAGAGATCAGCTTGCCAATTCATCCCATCATCACGAACGTTGCGAAGCAGTGCTATGAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AACGCCTGCTTCAGACCTGTATCAGTGTCAAAACTGACAGTGGCATaGAAACGTTTGCCGTGCTTCAGGATGTCCAGAGTCAGGAGCACC +
Preference number: 5 (lower is better)
Translates to: NACFRPVSVSKLTVA*KRLPCFRMSRVRST
Trigger: GGTGCTCCTGACTCTGGACATCCTGAAGCACGGCAAACGTTTCCATGCCACTGTCAGTTTTGACACTGATACAGGTCTGAAGCAGGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CCCTCCTGTTCGCCGAACTTCACGGTTCAGTACTGGATTCAAAACTaGATCGTAGCTTTCCACATCCTTTGCTTCCACAGCTGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: PSCSPNFTVQYWIQN*IVAFHILCFHSCQV
Trigger: GACCTGGCAGCTGTGGAAGCAAAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGAACAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167395.2
CDS-3UTR CAA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCAAGATCTCCTGGGTGTaGAGCTTCATTCGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLKISWV*SFIRKL
Trigger: CAGCTTCCGAATGAAGCTCAACACCCAGGAGATCTT...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCGGAAGAGCTTCTaGAGGTTGTCGGGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLLRKSF*RLSGRF
Trigger: AAACCTCCCCGACAACCTCAAGAAGCTCTTCCGGAG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCATCATCTGCCTGCACCTaGGCAATCAGATCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPSSACT*AIRSLN
Trigger: ATTTAAAGATCTGATTGCCAAGGTGCAGGCAGATGA...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTGAGAGTGATAGCTTGTaGTTGCTGCACGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSESDSL*LLHVAP
Trigger: AGGGGCCACGTGCAGCAACAACAAGCTATCACTCTC...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCCTTCTTCTCGGCGCTaGTTTGTTTCACCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSPSSRR*FVSPSA
Trigger: TGCGCTGGGTGAAACAAACAAGCGCCGAGAAGAAGG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TCTCTTGGATGCGGTACAACGCACGTTCCAAGTTTAGCCAAAAGCTaGTTTCCTGCAAGGCAGTTCCTGATGCTGGATCCCGGTCAAGCT +
Preference number: 5 (lower is better)
Translates to: SLGCGTTHVPSLAKS*FPARQFLMLDPGQA
Trigger: AGCTTGACCGGGATCCAGCATCAGGAACTGCCTTGCAGGAAATCAGCTTTTGGCTAAACTTGGAACGTGCGTTGTACCGCATCCAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp ATCCCGCCAACTTCTTCTCCGTCGCCATATGTCAAGTACATCTCCTaGCACACTTTCTTCAGCTCTTCTCGAAGGGCTGTCATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: IPPTSSPSPYVKYIS*HTFFSSSRRAVISP
Trigger: TGGGGAGATGACAGCCCTTCGAGAAGAGCTGAAGAAAGTGTGTCAGGAGATGTACTTGACATATGGCGACGGAGAAGAAGTTGGCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TGCGGAACTGGATGTTGGCTTGCTGTAAGTGATGAGACCAGGTGGTaGACAAGTTCTGGCGCATTTGCTGGTCAAAGTAGCCAGCGTAAG +
Preference number: 5 (lower is better)
Translates to: CGTGCWLAVSDETRW*TSSGAFAGQSSQRK
Trigger: CTTACGCTGGCTACTTTGACCAGCAAATGCGCCAGAACTTGTTCACCACCTGGTCTCATCACTTACAGCAAGCCAACATCCAGTTCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ATGTTTGAGCCCAGCATCTGCCCAAACTTGCTGAGAACCTCCTTATaGCAGGAGTCATACTTCAAGTTCACCTTGGACTGGACCTTGCCG +
Preference number: 5 (lower is better)
Translates to: MFEPSICPNLLRTSL*QESYFKFTLDWTLP
Trigger: CGGCAAGGTCCAGTCCAAGGTGAACTTGAAGTATGACTCCTGGCATAAGGAGGTTCTCAGCAAGTTTGGGCAGATGCTGGGCTCAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGCTTGGGCACCATTGTCTCGCAGACACTCTGGATCAGAATCTCCTaGTCAGGTAGGTTCTCAGCAATCTCTCCTTCATCAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SLGTIVSQTLWIRIS*SGRFSAISPSSTAS
Trigger: GGAAGCAGTTGATGAAGGAGAGATTGCTGAGAACCTACCTGAGCAGGAGATTCTGATCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CACTCGGGGTCCACATCGCCATCAAAGACAATCCACTGGCGTTTCTaGAGCTCACCTCTCACATTGTCTATGATCTTTCTCAGCACGTGT +
Preference number: 5 (lower is better)
Translates to: HSGSTSPSKTIHWRF*SSPLTLSMIFLSTC
Trigger: ACACGTGCTGAGAAAGATCATAGACAATGTGAGAGGTGAGCTGCAGAAACGCCAGTGGATTGTCTTTGATGGCGATGTGGACCCCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AATACGAATGAGACCTTCAACAGGCAATGTCTCCAGGGGTCTCAGTaGTTCAAAGATTCCTCTTACCCACCGAGTCATCTCACGGGGCGA +
Preference number: 5 (lower is better)
Translates to: NTNETFNRQCLQGSQ*FKDSSYPPSHLTGR
Trigger: TCGCCCCGTGAGATGACTCGGTGGGTAAGAGGAATCTTTGAAGCACTGAGACCCCTGGAGACATTGCCTGTTGAAGGTCTCATTCGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGGATAGGCCGGCTCATGGCTTTCTCTTTGTCTATGTTAGGGAAGTaGTTCAAGGCAACCATGTCAATGTTTTCGTCAGTCCAGCGCCGC +
Preference number: 5 (lower is better)
Translates to: RIGRLMAFSLSMLGK*FKATMSMFSSVQRR
Trigger: GCGGCGCTGGACTGACGAAAACATTGACATGGTTGCCTTGAAGCACTTCCCTAACATAGACAAAGAGAAAGCCATGAGCCGGCCTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCCAGGTCCTCCTTGACACTCATCTGCTTGTCTGCGATCACTTCCTaGTGTTTGTGTAGCTGCTCCTGGATTTCTTGGCTCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: SRSSLTLICLSAITS*CLCSCSWISWLMTF
Trigger: GAAGGTCATGAGCCAAGAAATCCAGGAGCAGCTACACAAACAGCAGGAAGTGATCGCAGACAAGCAGATGAGTGTCAAGGAGGACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTCAGTTCCTTGGCACCACCAGATGCAGCTGCTTGTGAGATGTTCTaGAGCTGTTTGATCCTCTCGCTGAAATCTGACACCCACTGGATC +
Preference number: 5 (lower is better)
Translates to: FSSLAPPDAAACEMF*SCLILSLKSDTHWI
Trigger: GATCCAGTGGGTGTCAGATTTCAGCGAGAGGATCAAACAGCTGCAGAACATCTCACAAGCAGCTGCATCTGGTGGTGCCAAGGAACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp ATATCTTCTGCCACCAGCTTGGGCACCATTGTCTCGCAGACACTCTaGATCAGAATCTCCTGCTCAGGTAGGTTCTCAGCAATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: ISSATSLGTIVSQTL*IRISCSGRFSAISP
Trigger: AGGAGAGATTGCTGAGAACCTACCTGAGCAGGAGATTCTGATCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TTCTCCACCCACTCGGGGTCCACATCGCCATCAAAGACAATCCACTaGCGTTTCTGCAGCTCACCTCTCACATTGTCTATGATCTTTCTC +
Preference number: 5 (lower is better)
Translates to: FSTHSGSTSPSKTIH*RFCSSPLTLSMIFL
Trigger: GAGAAAGATCATAGACAATGTGAGAGGTGAGCTGCAGAAACGCCAGTGGATTGTCTTTGATGGCGATGTGGACCCCGAGTGGGTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCGTCCACGTCTGGCCTTTCTGCTTTAAGCACTTCATTGAGACACTaGCTCTGTAAACTGCTGCGGGTGACGGTGAAGTTCACAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SSTSGLSALSTSLRH*LCKLLRVTVKFTKV
Trigger: GACCTTTGTGAACTTCACCGTCACCCGCAGCAGTTTACAGAGCCAGTGTCTCAATGAAGTGCTTAAAGCAGAAAGGCCAGACGTGGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGGCCACTTTCATGTCTaGGGGTTCAGGTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGGHFHV*GFRCFS
Trigger: GGAGAAGCACCTGAACCCCAAGACATGAAAGTGGCC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGCTTCCGTCCCTTCTTaGGAAACATCCAGACCATCG +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSASVPS*ETSRPS
Trigger: CGATGGTCTGGATGTTTCCAAAGAAGGGACGGAAGC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTATCCTGAACATCTCATaGGCATTCTTGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSILNIS*AFLAVP
Trigger: CGGCACGGCCAAGAATGCCAATGAGATGTTCAGGAT...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGAGCCTTGTTCACAATaGCAAGTGGCACTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLEPCSQ*QVALGS
Trigger: GCTTCCGAGTGCCACTTGCAATTGTGAACAAGGCTC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTATCTCCATGTCCAGCTaGTTGACCCAGATGGGCAGA +
Preference number: 5 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSISMSS*LTQMGR
Trigger: TCTGCCCATCTGGGTCAACAAGCTGGACATGGAGAT...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTAGGAGAGCTTGCCACTaGTTGAGATCTTCCCCTAGC +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLRRACH*LRSSPS
Trigger: GCTAGGGGAAGATCTCAACAAGTGGCAAGCTCTCCT...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TCTCCAACCGCAGCACCTGTCACCCGCCAACGCGAACCAACCACTTGCTTTCCAAAAGTCATAATGGCTTaGAGAAGACAGTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SPTAAPVTRQREPTTCFPKVIMA*RRQLLI
Trigger: GATGAGCAACTGTCTTCTCAAAGCCATTATGACTTT...TGGAAAGCAAGTGGTTGGTTCGCGTTGGCGGGTGACAGGTGCTGCGGTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGGACTGTATCTAAGGTaGGCACGACGACATCTGGGG +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGGLYLR*ARRHLG
Trigger: CCCCAGATGTCGTCGTGCCAACCTTAGATACAGTCC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTAAAAGTGCCATAGATTaGCGTCAGGGAGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLKSAID*RQGGWS
Trigger: GGACCAGCCTCCCTGACGCAAATCTATGGCACTTTT...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCCTTTGACAGCCAGTaGCTGTACAGGATAGGCCGG +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDESFDSQ*LYRIGR
Trigger: CCGGCCTATCCTGTACAGCAACTGGCTGTCAAAGGA...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTTTCTTCAGCTTGTCATaGGCCGCTGCGTTCTTGACC +
Preference number: 5 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSFFSLS*AAAFLT
Trigger: GGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAA...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCATTGGCTTTCTGCTGGTaGTCCTTGGCGTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPLAFCW*SLASSS
Trigger: GGAAGATGACGCCAAGGACAACCAGCAGAAAGCCAA...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTCAGGACAGGTGTGTTaGGCTTCACCTCTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGSGQVC*ASPLCP
Trigger: TGGGCACAGAGGTGAAGCCAAACACACCTGTCCTGA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTAGTGATAGCTTGTTGTaGCTGCACGTGGCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGSDSLL*LHVAPW
Trigger: CCAAGGGGCCACGTGCAGCAACAACAAGCTATCACT...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp CGTACTCGTCGTCCCACGTCTGGAAGACTTCGAAGCAAGCCACCATaGCCTTTTCAAACTCTTCATAGGCTACATGCATCAACTTCCGAG +
Preference number: 5 (lower is better)
Translates to: RTRRPTSGRLRSKPP*PFQTLHRLHASTSE
Trigger: CTCGGAAGTTGATGCATGTAGCCTATGAAGAGTTTGAAAAGGTCATGGTGGCTTGCTTCGAAGTCTTCCAGACGTGGGACGACGAGTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TTGTCGATCTTGCTTTTGATCAAGGACCTGGTAACGTCTCTTTGGTaGACCAGCTCTGTGATCAAGTGCTCCAGCTTCCGTCTCCGGAGA +
Preference number: 5 (lower is better)
Translates to: LSILLLIKDLVTSLW*TSSVIKCSSFRLRR
Trigger: TCTCCGGAGACGGAAGCTGGAGCACTTGATCACAGAGCTGGTTCACCAAAGAGACGTTACCAGGTCCTTGATCAAAAGCAAGATCGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp AGGCTTGTGACTGACTTGTGGAGCATCTGTATCCATGTCGACTTCTaGTTTATCCTCAGCTTGTCCAAGAAGAACCTGGGTCCAAGCTCG +
Preference number: 5 (lower is better)
Translates to: RLVTDLWSICIHVDF*FILSLSKKNLGPSS
Trigger: CGAGCTTGGACCCAGGTTCTTCTTGGACAAGCTGAGGATAAAGCAGAAGTCGACATGGATACAGATGCTCCACAAGTCAGTCACAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CGCGAACATCTCCTGGTACAGCTTGTACCTGCACTCCTCAATGGGTaGGTTCAGATAGATGACCTGATTTGTTATCCTCAGCTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: REHLLVQLVPALLNG*VQIDDLICYPQLVN
Trigger: GTTCACGAGCTGAGGATAACAAATCAGGTCATCTATCTGAACCCACCCATTGAGGAGTGCAGGTACAAGCTGTACCAGGAGATGTTCGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TTCTTGGTTTCCGCATTGTCAAAGGTTCCTCTGGCTTTCCTTATCTaGACCAGGAGAGCTTGCCACTTGTTGAGATCTTCCCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: FLVSALSKVPLAFLI*TRRACHLLRSSPSL
Trigger: CAGGCTAGGGGAAGATCTCAACAAGTGGCAAGCTCTCCTGGTCCAGATAAGGAAAGCCAGAGGAACCTTTGACAATGCGGAAACCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CCCTCCTGTTCGCCGAACTTCACGGTTCAGTACTGGATTCAAAACTaGATCGTAGCTTTCCACATCCTGGACAAGAAGGGGATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: PSCSPNFTVQYWIQN*IVAFHILDKKGIAK
Trigger: TTTGGCAATCCCCTTCTTGTCCAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGAACAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AATCAGCACCCTCCCTCCTGTTCGCCGAACTTCACGGTTCAGTACTaGATTCAAAACTGGATCGTAGCTTTCCACATCCTGGACAAGAAG +
Preference number: 5 (lower is better)
Translates to: NQHPPSCSPNFTVQY*IQNWIVAFHILDKK
Trigger: CTTCTTGTCCAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGAACAGGAGGGAGGGTGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp ATGGTGTCGTCATCCAGAATGCGGCCTTTTACCTCATTCAGAGCTTaGAGCAGAGACTTTTCAAGCTGCCGTAAACGGAGTTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: MVSSSRMRPFTSFRA*SRDFSSCRKRSWNS
Trigger: GGAGTTCCAACTCCGTTTACGGCAGCTTGAAAAGTCTCTGCTCCAAGCTCTGAATGAGGTAAAAGGCCGCATTCTGGATGACGACACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp AATCAGCACCCTCCCTCCTGTTCGCCGAACTTCACGGTTCAGTACTaGATTCAAAACTGGATCGTAGCTTTCCACATCCTTTGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: NQHPPSCSPNFTVQY*IQNWIVAFHILCFH
Trigger: GTGGAAGCAAAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGAACAGGAGGGAGGGTGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167395.2
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTTCAGGTGCTTCTCCTaGGTTCTGTTGTGCGACTGC +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGFRCFS*VLLCDC
Trigger: GCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGTAGAGCTGGTTGGCTaGGTGAGCCTTGTTCACAAT +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSVELVG*VSLVHN
Trigger: ATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTAC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTGGAATTCTGTCATGTTaGAGCCCAGCATCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSGILSC*SPASAQ
Trigger: TTGGGCAGATGCTGGGCTCAAACATGACAGAATTCC...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTCAGGTTTGCCACCTGTaGCTGAATGGCAGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGQVCHL*LNGRVL
Trigger: AAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTG...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAGAGTCCGCTAAGACGTaGAGTGTGACCTCCACATTG +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEESAKT*SVTSTL
Trigger: CAATGTGGAGGTCACACTCAACGTCTTAGCGGACTC...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCTCATGGCTTTCTCTTaGTCTATGTTAGGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: FTKPSHSVSPRTAHSSLLLMAFS*SMLGKC
Trigger: GCACTTCCCTAACATAGACAAAGAGAAAGCCATGAG...GAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCTCCCATCCGTAGACATCTGGTTTTaGAAAGTTTCACTCGTCTTT +
Preference number: 5 (lower is better)
Translates to: KPSHSVSPRTAHSSLLPSVDIWF*KVSLVF
Trigger: AAAGACGAGTGAAACTTTCAAAAACCAGATGTCTAC...GGATGGGAGAAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCGCTCATTTGGAGACTaGCATATCCTAGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLRSFGD*HILETG
Trigger: CCCTGTCTCTAGGATATGCAAGTCTCCAAATGAGCG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTACCTTGCACGCCAGCTaGAATTCACTGTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGTLHAS*NSLSKL
Trigger: CAGCTTCGACAGTGAATTCAAGCTGGCGTGCAAGGT...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTGCATCTTCAGCATCTaGCTGATCATGTCCACGCCT +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSCIFSI*LIMSTP
Trigger: AGGCGTGGACATGATCAGCAAGATGCTGAAGATGCA...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTTTGGAGAGTGATAGCTaGTTGTTGCTGCACGTGGCC +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGLESDS*LLLHVA
Trigger: GGCCACGTGCAGCAACAACAAGCTATCACTCTCCAA...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GGCAAGTTGATTTCATCACAGAACAAGACCAGCCACTTTCCAAGCTaGACAGGAGCCAAGACAACACCGTTAGGTGTACGCCTGTATTCG +
Preference number: 5 (lower is better)
Translates to: GKLISSQNKTSHFPS*TGAKTTPLGVRLYS
Trigger: CGAATACAGGCGTACACCTAACGGTGTTGTCTTGGCTCCTGTTCAGCTTGGAAAGTGGCTGGTCTTGTTCTGTGATGAAATCAACTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GTGGTTTTTCCAGCTCCACTAACACCAATCAGAAGCAGATGGCCTTaGGGTTGTCGGAATATTCTGTCGATCCTCAGCACATGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VVFPAPLTPIRSRWP*GCRNILSILSTWSR
Trigger: TCTGGACCATGTGCTGAGGATCGACAGAATATTCCGACAACCTCAAGGCCATCTGCTTCTGATTGGTGTTAGTGGAGCTGGAAAAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TTCGGCTTCTCCAGGTCCATCTTACTGGTGAATTCTTTGCCGACTTaGTACAGTGCTTCAGTGGACCAGTCACCAAACCAGTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: FGFSRSILLVNSLPT*YSASVDQSPNQFST
Trigger: TGTGCTGAACTGGTTTGGTGACTGGTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTCACCAGTAAGATGGACCTGGAGAAGCCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GTGTTGCGGATCTTTCTCAGATGTGTGAAAATTGCAACAAGGGCCTaGCTTATCTTGTCCAGCTCCGTGGCAGACAGCAAGTCATTCAGA +
Preference number: 5 (lower is better)
Translates to: VLRIFLRCVKIATRA*LILSSSVADSKSFR
Trigger: TCTGAATGACTTGCTGTCTGCCACGGAGCTGGACAAGATAAGGCAGGCCCTTGTTGCAATTTTCACACATCTGAGAAAGATCCGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTCTCGTATCTGCTTCAAAAATTCTTCCAAGGCCATCTCGCCTTGTaGCACCAGCAGCACATCCTTGACGACAGCTTCGTTCTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: FSYLLQKFFQGHLAL*HQQHILDDSFVLLK
Trigger: CTTCAGAAGAACGAAGCTGTCGTCAAGGATGTGCTGCTGGTGGCACAAGGCGAGATGGCCTTGGAAGAATTTTTGAAGCAGATACGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CTCCAGGTCCATCTTACTGGTGAATTCTTTGCCGACTTGATACAGTaGTTCAGTGGACCAGTCACCAAACCAGTTCAGCACACACCTGTT +
Preference number: 5 (lower is better)
Translates to: LQVHLTGEFFADLIQ*FSGPVTKPVQHTPV
Trigger: AACAGGTGTGTGCTGAACTGGTTTGGTGACTGGTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTCACCAGTAAGATGGACCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ACACTCATCTGCTTGTCTGCGATCACTTCCTGCTGTTTGTGTAGCTaGTCCTGGATTTCTTGGCTCATGACCTTCTTCTTCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: TLICLSAITSCCLCS*SWISWLMTFFFSAS
Trigger: AGAGGCTGAGAAGAAGAAGGTCATGAGCCAAGAAATCCAGGAGCAGCTACACAAACAGCAGGAAGTGATCGCAGACAAGCAGATGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCTGGTGAACTGCTATCCAGCCAAATGCCAAACTGCTCATCTGCCTaGACCTTGGCAATCAGATCTTTAAATGCAGGCAGACAGCTCAAC +
Preference number: 5 (lower is better)
Translates to: SGELLSSQMPNCSSA*TLAIRSLNAGRQLN
Trigger: GTTGAGCTGTCTGCCTGCATTTAAAGATCTGATTGCCAAGGTGCAGGCAGATGAGCAGTTTGGCATTTGGCTGGATAGCAGTTCACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp TCCACTGCTTTCTGCACTCTGTTCAAGATCTCTGAGAATGTCTTGTaGTCATACATGCAGGTTTCCAAGGAGCGGACCTCCAGGTCTATC +
Preference number: 5 (lower is better)
Translates to: STAFCTLFKISENVL*SYMQVSKERTSRSI
Trigger: GATAGACCTGGAGGTCCGCTCCTTGGAAACCTGCATGTATGACCACAAGACATTCTCAGAGATCTTGAACAGAGTGCAGAAAGCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp CACGTTTTTGATCTTGGGCTCTCCACCAGGCTTGTGACTGACTTGTaGAGCATCTGTATCCATGTCGACTTCTGCTTTATCCTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HVFDLGLSTRLVTDL*SICIHVDFCFILSL
Trigger: CAAGCTGAGGATAAAGCAGAAGTCGACATGGATACAGATGCTCCACAAGTCAGTCACAAGCCTGGTGGAGAGCCCAAGATCAAAAACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTTACTGGACCTTGAACTaGTCGTGCAGAGATTCGATG +
Preference number: 5 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSYWTLN*SCRDSM
Trigger: CATCGAATCTCTGCACGACAAGTTCAAGGTCCAGTA...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTTCTTGGTTTCCGCATaGTCAAAGGTTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSFLVSA*SKVPLA
Trigger: AGCCAGAGGAACCTTTGACAATGCGGAAACCAAGAA...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATAGTGTGACCTCCACATaGCTCAGCACAGACTGCAAG +
Preference number: 5 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNSVTST*LSTDCK
Trigger: CTTGCAGTCTGTGCTGAGCAATGTGGAGGTCACACT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTTTGGCGTTGTCGATCTaGCTTTTGATCAAGGACCTG +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLLALSI*LLIKDL
Trigger: CAGGTCCTTGATCAAAAGCAAGATCGACAACGCCAA...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTGAACCAGCTTGTCTaGAACACCCAGGTACTCAAA +
Preference number: 5 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSLNQLV*NTQVLK
Trigger: TTTGAGTACCTGGGTGTTCAAGACAAGCTGGTTCAG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTTGCTCATCACACAGTTaGAAGAACGGGACGATCTTG +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLCSSHS*KNGTIL
Trigger: CAAGATCGTCCCGTTCTTCAAACTGTGTGATGAGCA...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCACAGATGGCCTTGAGGTaGTCGGAATATTCTGTCGAT +
Preference number: 5 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPQMALR*SEYSVD
Trigger: ATCGACAGAATATTCCGACAACCTCAAGGCCATCTG...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCAGAAGCAGATGGCCTaGAGGTTGTCGGAATATTCT +
Preference number: 5 (lower is better)
Translates to: VLFTKPSHSVSPRTAHSSQKQMA*RLSEYS
Trigger: AGAATATTCCGACAACCTCAAGGCCATCTGCTTCTG...AGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAAATGTTCTTCAGTTCCTaGGCACCACCAGATGCAGCT +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDEMFFSS*APPDAA
Trigger: AGCTGCATCTGGTGGTGCCAAGGAACTGAAGAACAT...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTACTGTGGAGATGGCATaGGAGAGTGATAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSTVEMA*ESDSLL
Trigger: CAACAAGCTATCACTCTCCAATGCCATCTCCACAGT...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp AGTCAGGCACTATATAGTTCGGCTTCTCCAGGTCCATCTTACTGGTaGATTCTTTGCCGACTTGATACAGTGCTTCAGTGGACCAGTCAC +
Preference number: 5 (lower is better)
Translates to: SQALYSSASPGPSYW*ILCRLDTVLQWTSH
Trigger: GTGACTGGTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTCACCAGTAAGATGGACCTGGAGAAGCCGAACTATATAGTGCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TGCTTTGCCAGACTCTCTGATGTAGGACTTAAAGAAAGGAGCCACTaGATTGCTGATGAAAGAGTGCAGTGTCTCATACGGCGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: CFARLSDVGLKERSH*IADERVQCLIRRVF
Trigger: GAAGACTCGCCGTATGAGACACTGCACTCTTTCATCAGCAATGCAGTGGCTCCTTTCTTTAAGTCCTACATCAGAGAGTCTGGCAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp ATTTTACAAGCTTGGCTTTGCGGGTACTGGACCTTGAACTTGTCGTaGAGAGATTCGATGTCATCTTTCACACGTTGGATCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ILQAWLCGYWTLNLS*RDSMSSFTRWISWV
Trigger: GACCCAGCTGATCCAACGTGTGAAAGATGACATCGAATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTTGAGATCTGGGAGTGGAATTCTGTCATGTTTGAGCCCAGCATCTaGCCAAACTTGCTGAGAACCTCCTTATGCCAGGAGTCATACTTC +
Preference number: 5 (lower is better)
Translates to: FEIWEWNSVMFEPSI*PNLLRTSLCQESYF
Trigger: GAAGTATGACTCCTGGCATAAGGAGGTTCTCAGCAAGTTTGGGCAGATGCTGGGCTCAAACATGACAGAATTCCACTCCCAGATCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp CTTCTTTCTCCCTCTTTATCTTCTGGATCCTCTCCCTCTTCACATTaGCTGCACTTACAAGCACACTCTTCAAAGCCCGAAGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LLSPSLSSGSSPSSH*LHLQAHSSKPEAQS
Trigger: ACTTTGGGCTTCGGGCTTTGAAGAGTGTGCTTGTAAGTGCAGGCAATGTGAAGAGGGAGAGGATCCAGAAGATAAAGAGGGAGAAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 90 bp ACTGGACCTTGCCGTAATCTATCACCACCGGACCAAACTCTTTCTTaGTTTCCGCATTGTCAAAGGTTCCTCTGGCTTTCCTTATCTGGA +
Preference number: 5 (lower is better)
Translates to: TGPCRNLSPPDQTLS*FPHCQRFLWLSLSG
Trigger: TCCAGATAAGGAAAGCCAGAGGAACCTTTGACAATGCGGAAACCAAGAAAGAGTTTGGTCCGGTGGTGATAGATTACGGCAAGGTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATCGGACGAACAGTGCATaGAACCTGGAGAAAATCCTG +
Preference number: 5 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNRTNSA*NLEKIL
Trigger: CAGGATTTTCTCCAGGTTCAATGCACTGTTCGTCCG...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGTCATCTTTCACACGTaGGATCAGCTGGGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNVIFHT*DQLGLV
Trigger: TACCAGACCCAGCTGATCCAACGTGTGAAAGATGAC...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTCCAAAGCTTGTGTCATaGTCAAATAGCAACGGTCAG +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLPKLVS*SNSNGQ
Trigger: CTGACCGTTGCTATTTGACAATGACACAAGCTTTGG...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTAAGGTTTCGTCACAGTaGAAAACTAAGACGAACCGC +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLKVSSQ*KTKTNR
Trigger: GCGGTTCGTCTTAGTTTTCAACTGTGACGAAACCTT...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGTGTTTTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTCTGGGATATAATCCTTaGACAGCCAGTTGCTGTACA +
Preference number: 5 (lower is better)
Translates to: SVLFTKPSHSVSPRTAHSLGYNP*TASCCT
Trigger: TGTACAGCAACTGGCTGTCAAAGGATTATATCCCAG...AGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AGAGCGGCAAGAGGCGGGAGCCCGTCATGCTTAGTGTTTTATTTACTAAACCCAGAATTCTTTGCCGACTaGATACAGTGCTTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: RAARGGSPSCLVFYLLNPEFFAD*IQCFSG
Trigger: TCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTC...TGGGTTTAGTAAATAAAACACTAAGCATGACGGGCTCCCGCCTCTTGCCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATTTGACACTCATCTGCTaGTCTGCGATCACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNLTLIC*SAITSC
Trigger: GCAGGAAGTGATCGCAGACAAGCAGATGAGTGTCAA...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GGACATGACTCATTTTACAAGCTTGGCTTTGCGGGTACTGGACCTTaGACTTGTCGTGCAGAGATTCGATGTCATCTTTCACACGTTGGA +
Preference number: 5 (lower is better)
Translates to: GHDSFYKLGFAGTGP*TCRAEIRCHLSHVG
Trigger: TCCAACGTGTGAAAGATGACATCGAATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAAAATGAGTCATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp TTCCTCTGGCTTTCCTTATCTGGACCAGGAGAGCTTGCCACTTGTTaGGATCTTCCCCTAGCCTGTTGTAAATGTTTTCTGCCTGCATAT +
Preference number: 5 (lower is better)
Translates to: FLWLSLSGPGELATC*DLPLACCKCFLPAY
Trigger: ATATGCAGGCAGAAAACATTTACAACAGGCTAGGGGAAGATCTCAACAAGTGGCAAGCTCTCCTGGTCCAGATAAGGAAAGCCAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCTGCACTCTGTTCAAGATCTCTGAGAATGTCTTGTGGTCATACATaGAGGTTTCCAAGGAGCGGACCTCCAGGTCTATCTTTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: SALCSRSLRMSCGHT*RFPRSGPPGLSFPQ
Trigger: TTGAGGAAAAGATAGACCTGGAGGTCCGCTCCTTGGAAACCTGCATGTATGACCACAAGACATTCTCAGAGATCTTGAACAGAGTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TTTCTCCCTCTTTATCTTCTGGATCCTCTCCCTCTTCACATTGCCTaGACTTACAAGCACACTCTTCAAAGCCCGAAGCCCAAAGTCATA +
Preference number: 5 (lower is better)
Translates to: FLPLYLLDPLPLHIA*TYKHTLQSPKPKVI
Trigger: TATGACTTTGGGCTTCGGGCTTTGAAGAGTGTGCTTGTAAGTGCAGGCAATGTGAAGAGGGAGAGGATCCAGAAGATAAAGAGGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCAAAACTGGATCGTAGCTTTCCACATCCTGGACAAGAAGGGGATTaGCAAATCTCAGAGCACTCTCCAAATTCTTCCGGAAGGCATCAT +
Preference number: 5 (lower is better)
Translates to: SKLDRSFPHPGQEGD*QISEHSPNSSGRHH
Trigger: ATGATGCCTTCCGGAAGAATTTGGAGAGTGCTCTGAGATTTGGCAATCCCCTTCTTGTCCAGGATGTGGAAAGCTACGATCCAGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATAAAGGAGCCACTGCATaGCTGATGAAAGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNKGATA*LMKECS
Trigger: ACTGCACTCTTTCATCAGCAATGCAGTGGCTCCTTT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp AACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATAGCCACTCATTGATTTaGGGGTGTTCAGTGATGGAC +
Preference number: 5 (lower is better)
Translates to: NQPLAFQSINPSTPLRMNSHSLI*GCSVMD
Trigger: GTCCATCACTGAACACCCCAAAATCAATGAGTGGCT...ATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTGCTTTGAGAAGACAGTaGCTCATCACACAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLALRRQ*LITQFE
Trigger: TTCAAACTGTGTGATGAGCAACTGTCTTCTCAAAGC...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp TTATTTACTAAACCCAGCCATTCGGTCAGCCCTCGGACAGCGCACTCTTCTCTTTCCATATCGGGCAAGTaGATTTCATCACAGAACAAG +
Preference number: 5 (lower is better)
Translates to: LFTKPSHSVSPRTAHSSLSISGK*ISSQNK
Trigger: CTTGTTCTGTGATGAAATCAACTTGCCCGATATGGA...AAGAGAAGAGTGCGCTGTCCGAGGGCTGACCGAATGGCTGGGTTTAGTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp GAACCAACCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAACTAACCTTGACTTGTTaGTTCAGCAGCTCACAAGTA +
Preference number: 5 (lower is better)
Translates to: EPTTCFPVHQPFHTVKDELTLTC*FSSSQV
Trigger: TACTTGTGAGCTGCTGAACAAACAAGTCAAGGTTAG...TTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGGTTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS-3UTR CAA 90 bp CCACTTGCTTTCCAGTCCATCAACCCTTCCACACCGTTAAGGATGAATGAAGGTGCTTTAAGCACTTCATaGAGACACTGGCTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: PLAFQSINPSTPLRMNEGALSTS*RHWLCK
Trigger: TTTACAGAGCCAGTGTCTCAATGAAGTGCTTAAAGC...ACCTTCATTCATCCTTAACGGTGTGGAAGGGTTGATGGACTGGAAAGCAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp TCATTTAAGATGATGCTGGAAACGCCGGCGAACATTTTCTTGAAGTaGTTCTGCAACTTAGCCACGTTCTTGCTATTCCCAATGATCTCA +
Preference number: 5 (lower is better)
Translates to: SFKMMLETPANIFLK*FCNLATFLLFPMIS
Trigger: TGAGATCATTGGGAATAGCAAGAACGTGGCTAAGTTGCAGAAGCACTTCAAGAAAATGTTCGCCGGCGTTTCCAGCATCATCTTAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 90 bp GTCGGAATATTCTGTCGATCCTCAGCACATGGTCCAGAACTTCATTaGATAAGACCAAGGGAACATCAAGTTCTTCTTCATAGAAGACCT +
Preference number: 5 (lower is better)
Translates to: VGIFCRSSAHGPELH*IRPREHQVLLHRRP
Trigger: AGGTCTTCTATGAAGAAGAACTTGATGTTCCCTTGGTCTTATTCAATGAAGTTCTGGACCATGTGCTGAGGATCGACAGAATATTCCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 90 bp GTATTTATCAATCCAAGTAATGTAGGTATTTGGGTCAATAGAAGTTaGTTTTCCAAAAATCTCCACTTCTGTAACAGACTCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: VFINPSNVGIWVNRS*FSKNLHFCNRLCQK
Trigger: CTTCTGGCAGAGTCTGTTACAGAAGTGGAGATTTTTGGAAAAGCAACTTCTATTGACCCAAATACCTACATTACTTGGATTGATAAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AGGTGCTTCTGCAGCACCGCCACGTCCGCCACATTCTaGACCGCCGACACCTCCAGGCCGGCCGAGCCGTCC +
Preference number: 6 (lower is better)
Translates to: RCFCSTATSATF*TADTSRPAEPS
Trigger: GGACGGCTCGGCCGGCCTGGAGGTGTCGGCGGTGCAGAATGTGGCGGACGTGGCGGTGCTGCAGAAGCACCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GAGCCCAGGCAGCGCAGGCGCGTCAGGTCCATGATGTGCTCCAGCTaGAAGGCGTGCTCCAGCGCCTTGGTGACCAGGCCGTTGGACGTG +
Preference number: 6 (lower is better)
Translates to: EPRQRRRVRSMMCSS*KACSSALVTRPLDV
Trigger: CACGTCCAACGGCCTGGTCACCAAGGCGCTGGAGCACGCCTTCAAGCTGGAGCACATCATGGACCTGACGCGCCTGCGCTGCCTGGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TCCCAGTGCGGCCCCGCACGCGAGCGCTCTCAATGGTaGAGATGCGCCCGGAGACACCAAGGTTGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: SQCGPARERSQW*RCARRHQGCAA
Trigger: AGCAGCGCAACCTTGGTGTCTCCGGGCGCATCTTCACCATTGAGAGCGCTCGCGTGCGGGGCCGCACTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTGTGGACCTGCGGGTCTGACAGGAACTTGCGCATCTaGTCCAGGGCGCTCTTCTCCTCCAGCGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: VWTCGSDRNLRI*SRALFSSSAAS
Trigger: GGAGGCGGCGCTGGAGGAGAAGAGCGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GGAGCGCTCCACCAGGACCGTGTGGACCTGCGGGTCTaGCAGGAACTTGCGCATCTGCTCCAGGGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: GALHQDRVDLRV*QELAHLLQGAL
Trigger: AAGAGCGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCTGGTGGAGCGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TGGGCCATGGCCAACAGGCGGTCGGGTCGGAAGGCTTaGATCAGGAGCAGGCGGTGGATGGCCTGCCCAATG +
Preference number: 6 (lower is better)
Translates to: WAMANRRSGRKA*IRSRRWMACPM
Trigger: CATTGGGCAGGCCATCCACCGCCTGCTCCTGATTCAAGCCTTCCGACCCGACCGCCTGTTGGCCATGGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CCAGGACCGTGTGGACCTGCGGGTCTGACAGGAACTTaGGCATCTGCTCCAGGGCGCTCTTCTCCTCCAGCG +
Preference number: 6 (lower is better)
Translates to: PGPCGPAGLTGT*ASAPGRSSPPA
Trigger: CGCTGGAGGAGAAGAGCGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TTGGCATTGTACTGCGCCACGTTGCGGCAGGCCTGGTaGAGCATGGAGAAGAGCGAGCCCAGGCAGCGCAGG +
Preference number: 6 (lower is better)
Translates to: LALYCATLRQAW*SMEKSEPRQRR
Trigger: CCTGCGCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TGGTTGGCATTGTACTGCGCCACGTTGCGGCAGGCCTaGTGCAGCATGGAGAAGAGCGAGCCCAGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: WLALYCATLRQA*CSMEKSEPRQR
Trigger: GCGCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GGACCTCAGCAGTCCGGAAGCCCTGCGAGTACAGCATaGCCTGGGCGATCAGCTGCCGGTCAGGCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: GPQQSGSPASTA*PGRSAAGQAWS
Trigger: TGACCAAGCCTGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGCTGAGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CTCAGGACCCTGACAATGACAGCCCTCAGCTGCTCGTaGTGGCGGCGGAACTTCCTCATCTGGTCGAGGCGG +
Preference number: 6 (lower is better)
Translates to: LRTLTMTALSCS*WRRNFLIWSRR
Trigger: CCGCCTCGACCAGATGAGGAAGTTCCGCCGCCAGCACGAGCAGCTGAGGGCTGTCATTGTCAGGGTCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CCAGGCTGGACGGCCATCGGAGGTGGAGTCCGTCCTTaGCTTCTTCTCCGTCTCTGCGTAGGCCAGGTCATC +
Preference number: 6 (lower is better)
Translates to: PGWTAIGGGVRP*LLLRLCVGQVI
Trigger: GATGACCTGGCCTACGCAGAGACGGAGAAGAAGGCAAGGACGGACTCCACCTCCGATGGCCGTCCAGCCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TGTGGGATGAGGTGCAGCCAGTTGGACGCCGTGGTGTaGAGTGTCCTCATCCAGGCTGGACGGCCATCGGAG +
Preference number: 6 (lower is better)
Translates to: CGMRCSQLDAVV*SVLIQAGRPSE
Trigger: CTCCGATGGCCGTCCAGCCTGGATGAGGACACTGCACACCACGGCGTCCAACTGGCTGCACCTCATCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCAGCAGTCCGGAAGCCCTGCGAGTACAGCATGACCTaGGCGATCAGCTGCCGGTCAGGCTTGGTCATCGCC +
Preference number: 6 (lower is better)
Translates to: SAVRKPCEYSMT*AISCRSGLVIA
Trigger: GGCGATGACCAAGCCTGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACCAGGACCGTGTGGACCTGCGGGTCTGACAGGAACTaGCGCATCTGCTCCAGGGCGCTCTTCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TRTVWTCGSDRN*RICSRALFSSS
Trigger: GCTGGAGGAGAAGAGCGCCCTGGAGCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GTGTCCTCATCCAGGCTGGACGGCCATCGGAGGTGGAGTCCGTCCTaGCCTTCTTCTCCGTCTCTGCGTAGGCCAGGTCATCCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: VSSSRLDGHRRWSPS*PSSPSLRRPGHPRP
Trigger: AGGACGAGGATGACCTGGCCTACGCAGAGACGGAGAAGAAGGCAAGGACGGACTCCACCTCCGATGGCCGTCCAGCCTGGATGAGGACAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TGTGGCCTCAGGACCCTGACAATGACAGCCCTCAGCTaGTCGTGCTGGCGGCGGAACTTCCTCATCTGGTCG +
Preference number: 6 (lower is better)
Translates to: CGLRTLTMTALS*SCWRRNFLIWS
Trigger: CGACCAGATGAGGAAGTTCCGCCGCCAGCACGAGCAGCTGAGGGCTGTCATTGTCAGGGTCCTGAGGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AAGCCCTGCGAGTACAGCATGACCTGGGCGATCAGCTaGCGGTCAGGCTTGGTCATCGCCAAGCTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: KPCEYSMTWAIS*RSGLVIAKLRK
Trigger: CTTCCGGAGCTTGGCGATGACCAAGCCTGACCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCCTCTTTGAGGGTGGAGCGCTCCACCAGGACCGTGTaGACCTGCGGGTCTGACAGGAACTTGCGCATCTGC +
Preference number: 6 (lower is better)
Translates to: SSLRVERSTRTV*TCGSDRNLRIC
Trigger: GCAGATGCGCAAGTTCCTGTCAGACCCGCAGGTCCACACGGTCCTGGTGGAGCGCTCCACCCTCAAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TGCTCCCGCAGTGCCTCTTGTATGCACTGCACCTGCTaGGATACAGCTGAGAGCATCCGCTCCTCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: CSRSASCMHCTC*DTAESIRSSRR
Trigger: CCGCCTGGAGGAGCGGATGCTCTCAGCTGTATCCCAGCAGGTGCAGTGCATACAAGAGGCACTGCGGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGCTCCTCGTGGGAGTCCAGCATGAGCCCCTCCTTCTaGGCCCCCTCTTTGCACTGTGTCATCAGCGTGGCA +
Preference number: 6 (lower is better)
Translates to: SSSWESSMSPSF*APSLHCVISVA
Trigger: TGCCACGCTGATGACACAGTGCAAAGAGGGGGCCCAGAAGGAGGGGCTCATGCTGGACTCCCACGAGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CATTCTCTGTGCACAGGTCGTCGGCAGGCAGAGAGCTaGCCTGCCAGCGGAGGCGTTCGTCAGCATTGGAGA +
Preference number: 6 (lower is better)
Translates to: HSLCTGRRQAES*PASGGVRQHWR
Trigger: TCTCCAATGCTGACGAACGCCTCCGCTGGCAGGCCAGCTCTCTGCCTGCCGACGACCTGTGCACAGAGAATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GACTGCAAGGGCCCCACATCACCACCTCCCCCAACGTaGCTCAGCGCATTCTCCACGTTCTCGGACCAGGCT +
Preference number: 6 (lower is better)
Translates to: DCKGPTSPPPPT*LSAFSTFSDQA
Trigger: AGCCTGGTCCGAGAACGTGGAGAATGCGCTGAGCAACGTTGGGGGAGGTGGTGATGTGGGGCCCTTGCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCCACGCCTTGGGTGGTAAGCAGGACCCTTTCAGCATaGTTGGGGAGGCCCAGCCATGAGGGTGTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: STPWVVSRTLSA*LGRPSHEGVWA
Trigger: CGCCCAGACACCCTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCCAGGCTGGACGGCCATCGGAGGTGGAGTCCGTCCTaGCCTTCTTCTCCGTCTCTGCGTAGGCCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: SRLDGHRRWSPS*PSSPSLRRPGH
Trigger: ATGACCTGGCCTACGCAGAGACGGAGAAGAAGGCAAGGACGGACTCCACCTCCGATGGCCGTCCAGCCTGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CTCAGCACAGACTGCAAGGGCCCCACATCACCACCTCCCCCAACGTaGCTCAGCGCATTCTCCACGTTCTCGGACCAGGCTATCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LSTDCKGPTSPPPPT*LSAFSTFSDQAIWA
Trigger: AGCCCAGATAGCCTGGTCCGAGAACGTGGAGAATGCGCTGAGCAACGTTGGGGGAGGTGGTGATGTGGGGCCCTTGCAGTCTGTGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AGCACACACCTGTTGAAAAGGGCTGGTGAGGTGGCCGCCCTGTCCTaGAGCCCCTCTGAGGACGGGTTCATGGTGAAGACCACGTGCAGG +
Preference number: 6 (lower is better)
Translates to: STHLLKRAGEVAALS*SPSEDGFMVKTTCR
Trigger: CCTGCACGTGGTCTTCACCATGAACCCGTCCTCAGAGGGGCTCAAGGACAGGGCGGCCACCTCACCAGCCCTTTTCAACAGGTGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCGGCAGGCAGAGAGCTGGCCTGCCAGCGGAGGCGTTCGTCAGCATaGGAGAGGTACTCCGTCCTTGCAATGTCTGTGCGGAACTGGATG +
Preference number: 6 (lower is better)
Translates to: SAGRELACQRRRSSA*ERYSVLAMSVRNWM
Trigger: CATCCAGTTCCGCACAGACATTGCAAGGACGGAGTACCTCTCCAATGCTGACGAACGCCTCCGCTGGCAGGCCAGCTCTCTGCCTGCCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp ATCATGTCCACGCCTTGGGTGGTAAGCAGGACCCTTTCAGCATTGTaGGGGAGGCCCAGCCATGAGGGTGTCTGGGCGTCAGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: IMSTPWVVSRTLSAL*GRPSHEGVWASGSS
Trigger: GCTGCTGCCTGACGCCCAGACACCCTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGTGGACATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CTGATCATGTCCACGCCTTGGGTGGTAAGCAGGACCCTTTCAGCATaGTTGGGGAGGCCCAGCCATGAGGGTGTCTGGGCGTCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LIMSTPWVVSRTLSA*LGRPSHEGVWASGS
Trigger: GCTGCCTGACGCCCAGACACCCTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGTGGACATGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TCTGGGGCTGCCACCTTGTGTGTCTCCACTTCAATCTaGGGCACCTTGGCCTGCCACGGCGACCACTCTCCA +
Preference number: 6 (lower is better)
Translates to: SGAATLCVSTSI*GTLACHGDHSP
Trigger: TGGAGAGTGGTCGCCGTGGCAGGCCAAGGTGCCTCAGATTGAAGTGGAGACACACAAGGTGGCAGCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ACTGCAAGGGCCCCACATCACCACCTCCCCCAACGTTaGTCAGCGCATTCTCCACGTTCTCGGACCAGGCTA +
Preference number: 6 (lower is better)
Translates to: TARAPHHHLPQR*SAHSPRSRTRL
Trigger: TAGCCTGGTCCGAGAACGTGGAGAATGCGCTGAGCAACGTTGGGGGAGGTGGTGATGTGGGGCCCTTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ATCTTGTTGGCAAGGACCTCAGCAGTCCGGAAGCCCTaGGAGTACAGCATGACCTGGGCGATCAGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: ILLARTSAVRKP*EYSMTWAISCR
Trigger: CCGGCAGCTGATCGCCCAGGTCATGCTGTACTCGCAGGGCTTCCGGACTGCTGAGGTCCTTGCCAACAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GGAGGGTTGGCCATGGACCTCACCTCCACCAGGTGCTaGTTCTTGATGGACTTCACAGCGTTCTGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: GGLAMDLTSTRC*FLMDFTAFWAS
Trigger: CGAGGCCCAGAACGCTGTGAAGTCCATCAAGAAGCAGCACCTGGTGGAGGTGAGGTCCATGGCCAACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CTCGCTAGCAGCATGGCGAAGGTGATGTGGTCCTGGTaGAGCATGCCTCGAGCCACTCGGTTAAAGGCCACC +
Preference number: 6 (lower is better)
Translates to: LASSMAKVMWSW*SMPRATRLKAT
Trigger: GGTGGCCTTTAACCGAGTGGCTCGAGGCATGCTGCACCAGGACCACATCACCTTCGCCATGCTGCTAGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCAGGCAGACAGCTCAACCTCACGACAGCTTCTGCCTaGTCTACGGTCAGGCCCTGGATTTTGGGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: AGRQLNLTTASA*STVRPWILGVE
Trigger: CTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGTCGTGAGGTTGAGCTGTCTGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GAGAGCTGGCCTGCCAGCGGAGGCGTTCGTCAGCATTaGAGAGGTACTCCGTCCTTGCAATGTCTGTGCGGA +
Preference number: 6 (lower is better)
Translates to: ESWPASGGVRQH*RGTPSLQCLCG
Trigger: TCCGCACAGACATTGCAAGGACGGAGTACCTCTCCAATGCTGACGAACGCCTCCGCTGGCAGGCCAGCTCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTGTTGAAAAGGGCTGGTGAGGTGGCCGCCCTGTCCTaGAGCCCCTCTGAGGACGGGTTCATGGTGAAGACC +
Preference number: 6 (lower is better)
Translates to: LLKRAGEVAALS*SPSEDGFMVKT
Trigger: GGTCTTCACCATGAACCCGTCCTCAGAGGGGCTCAAGGACAGGGCGGCCACCTCACCAGCCCTTTTCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AGAGAGCTGGCCTGCCAGCGGAGGCGTTCGTCAGCATaGGAGAGGTACTCCGTCCTTGCAATGTCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: RELACQRRRSSA*ERYSVLAMSVR
Trigger: CCGCACAGACATTGCAAGGACGGAGTACCTCTCCAATGCTGACGAACGCCTCCGCTGGCAGGCCAGCTCTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AAGCTGCGGGTGGTGAACAGCCGCTCCAGGAAGGTGTaGAGCAGACGCTGGTCGAACTCATTGTCCACCCGC +
Preference number: 6 (lower is better)
Translates to: KLRVVNSRSRKV*SRRWSNSLSTR
Trigger: GCGGGTGGACAATGAGTTCGACCAGCGTCTGCTCAACACCTTCCTGGAGCGGCTGTTCACCACCCGCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACGCCTTGGGTGGTAAGCAGGACCCTTTCAGCATTGTaGGGGAGGCCCAGCCATGAGGGTGTCTGGGCGTCA +
Preference number: 6 (lower is better)
Translates to: TPWVVSRTLSAL*GRPSHEGVWAS
Trigger: TGACGCCCAGACACCCTCATGGCTGGGCCTCCCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp ATCTGCATGGGGAAATCAGGATGGTTGGCATTGTACTGCGCCACGTaGCGGCAGGCCTGGTGCAGCATGGAGAAGAGCGAGCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: ICMGKSGWLALYCAT*RQAWCSMEKSEPRQ
Trigger: CTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AACAAACATGTGGGCCATGGCCAACAGGCGGTCGGGTCGGAAGGCTaGAATCAGGAGCAGGCGGTGGATGGCCTGCCCAATGGGAGTTGT +
Preference number: 6 (lower is better)
Translates to: NKHVGHGQQAVGSEG*NQEQAVDGLPNGSC
Trigger: ACAACTCCCATTGGGCAGGCCATCCACCGCCTGCTCCTGATTCAAGCCTTCCGACCCGACCGCCTGTTGGCCATGGCCCACATGTTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GTGAAGATGCGCCCGGAGACACCAAGGTTGCGCTGCTaGACCTTCCTCGCCCAGTCATCGAAGATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VKMRPETPRLRC*TFLAQSSKISW
Trigger: CCAGGAGATCTTCGATGACTGGGCGAGGAAGGTTCAGCAGCGCAACCTTGGTGTCTCCGGGCGCATCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CTAAGACGAACCGCCCCAGCTGATGGCCGAGGGCTTTaGCGGACTCTGTCTTTCCGGTTCCAGCAGGTCCAA +
Preference number: 6 (lower is better)
Translates to: LRRTAPADGRGL*RTLSFRFQQVQ
Trigger: TTGGACCTGCTGGAACCGGAAAGACAGAGTCCGTCAAAGCCCTCGGCCATCAGCTGGGGCGGTTCGTCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GGCGCATTTGCTGGTCAAAGTAGCCAGCGTAAGCAATaGAGGCCGCCGACAGGAGGCAGTCCCCAGCAATGG +
Preference number: 6 (lower is better)
Translates to: GAFAGQSSQRKQ*RPPTGGSPQQW
Trigger: CCATTGCTGGGGACTGCCTCCTGTCGGCGGCCTTCATTGCTTACGCTGGCTACTTTGACCAGCAAATGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CAGGGTCTTCAGGGCAGACCATGGGATCTTATCCGGTaGGATGTTCTGCCGGCCCTTGGCTGTGTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: QGLQGRPWDLIR*DVLPALGCVVQ
Trigger: CTGGACGACACAGCCAAGGGCCGGCAGAACATCTCACCGGATAAGATCCCATGGTCTGCCCTGAAGACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GGGTTGGAATGCTCCCGCAGTGCCTCTTGTATGCACTaGACCTGCTGGGATACAGCTGAGAGCATCCGCTCC +
Preference number: 6 (lower is better)
Translates to: GLECSRSASCMH*TCWDTAESIRS
Trigger: GGAGCGGATGCTCTCAGCTGTATCCCAGCAGGTGCAGTGCATACAAGAGGCACTGCGGGAGCATTCCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCATTGGAGAAGCGGCCTCTTCGCCCTCGTCTTCTTTaGCTTTTCGCCTACGCTGTGCCTCGTCCTCCCCTT +
Preference number: 6 (lower is better)
Translates to: ALEKRPLRPRLL*LFAYAVPRPPL
Trigger: AAGGGGAGGACGAGGCACAGCGTAGGCGAAAAGGCAAAGAAGACGAGGGCGAAGAGGCCGCTTCTCCAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AGCCCCTCTGAGGACGGGTTCATGGTGAAGACCACGTaGAGGTTGCGGATCACCTGGCTGGTGAACCACTTG +
Preference number: 6 (lower is better)
Translates to: SPSEDGFMVKTT*RLRITWLVNHL
Trigger: CAAGTGGTTCACCAGCCAGGTGATCCGCAACCTGCACGTGGTCTTCACCATGAACCCGTCCTCAGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCTCCGGTTTACCTTTGCTTCCACAGCTGCCAGGTCTaGCTTGATGGCCTGGGCCTCAGAGATGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: APVYLCFHSCQV*LDGLGLRDEDS
Trigger: GCTGTCCTCATCTCTGAGGCCCAGGCCATCAAGGCAGACCTGGCAGCTGTGGAAGCAAAGGTAAACCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TCCATGGTGAGGAAAAGTCGGAAGCAGGCGTGGGGCTaGAGGGAGTGCAGCTTCTTCTCCAGCTGCATCAGC +
Preference number: 6 (lower is better)
Translates to: SMVRKSRKQAWG*RECSFFSSCIS
Trigger: GCTGATGCAGCTGGAGAAGAAGCTGCACTCCCTGCAGCCCCACGCCTGCTTCCGACTTTTCCTCACCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCCCGCTTCCTCTTGACGATGTCTCGCAGCAGCACCTaGAGCTTCTCGTACTCGTCGTCCCACGTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SRFLLTMSRSST*SFSYSSSHVWK
Trigger: CTTCCAGACGTGGGACGACGAGTACGAGAAGCTCCAGGTGCTGCTGCGAGACATCGTCAAGAGGAAGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CGCTCCAGCTGCTCAATCTGCATGGGGAAATCAGGATaGTTGGCATTGTACTGCGCCACGTTGCGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: RSSCSICMGKSG*LALYCATLRQA
Trigger: GGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGATTGAGCAGCTGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CAGCTTCTGCCTGCTCTACGGTCAGGCCCTGGATTTTaGGGGTGGAGCCAGCACTCAGCACAATCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: QLLPALRSGPGF*GWSQHSAQSPS
Trigger: GGAAGGAGATTGTGCTGAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CTCACGACAGCTTCTGCCTGCTCTACGGTCAGGCCCTaGATTTTGGGGGTGGAGCCAGCACTCAGCACAATC +
Preference number: 6 (lower is better)
Translates to: LTTASACSTVRP*ILGVEPALSTI
Trigger: GATTGTGCTGAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGTCGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CGCCACACCATCTTCAGGTTCTCCTCCCGCTTCCTCTaGACGATGTCTCGCAGCAGCACCTGGAGCTTCTCG +
Preference number: 6 (lower is better)
Translates to: RHTIFRFSSRFL*TMSRSSTWSFS
Trigger: CGAGAAGCTCCAGGTGCTGCTGCGAGACATCGTCAAGAGGAAGCGGGAGGAGAACCTGAAGATGGTGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AGCATTGGAGAAGCGGCCTCTTCGCCCTCGTCTTCTTaGCCTTTTCGCCTACGCTGTGCCTCGTCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: SIGEAASSPSSS*PFRLRCASSSP
Trigger: AGGGGAGGACGAGGCACAGCGTAGGCGAAAAGGCAAAGAAGACGAGGGCGAAGAGGCCGCTTCTCCAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTGAAGGCGTGCTCCAGCGCCTTGGTGACCAGGCCGTaGGACGTGAAGTACGGCTGCATGATCGTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LKACSSALVTRP*DVKYGCMIVAA
Trigger: TGCAGCAACGATCATGCAGCCGTACTTCACGTCCAACGGCCTGGTCACCAAGGCGCTGGAGCACGCCTTCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GGGAAATCAGGATGGTTGGCATTGTACTGCGCCACGTaGCGGCAGGCCTGGTGCAGCATGGAGAAGAGCGAG +
Preference number: 6 (lower is better)
Translates to: GKSGWLALYCAT*RQAWCSMEKSE
Trigger: CTCGCTCTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTGGCCGCTGCGTTCTTGACCTCCAGCTCTTGGCTCTaGATCCTCAGGTCACGGCGCAGTTCTTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: LAAAFLTSSSWL*ILRSRRSSSTW
Trigger: CCAGGTGGAAGAACTGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GTCAGGTCCATGATGTGCTCCAGCTTGAAGGCGTGCTCCAGCGCCTaGGTGACCAGGCCGTTGGACGTGAAGTACGGCTGCATGATCGTT +
Preference number: 6 (lower is better)
Translates to: VRSMMCSSLKACSSA*VTRPLDVKYGCMIV
Trigger: AACGATCATGCAGCCGTACTTCACGTCCAACGGCCTGGTCACCAAGGCGCTGGAGCACGCCTTCAAGCTGGAGCACATCATGGACCTGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CGCTCCAGCTGCTCAATCTGCATGGGGAAATCAGGATGGTTGGCATaGTACTGCGCCACGTTGCGGCAGGCCTGGTGCAGCATGGAGAAG +
Preference number: 6 (lower is better)
Translates to: RSSCSICMGKSGWLA*YCATLRQAWCSMEK
Trigger: CTTCTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGATTGAGCAGCTGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AGCTTGTCATTGGCCGCTGCGTTCTTGACCTCCAGCTCTTGGCTCTaGATCCTCAGGTCACGGCGCAGTTCTTCCACCTGGTCCACGGTC +
Preference number: 6 (lower is better)
Translates to: SLSLAAAFLTSSSWL*ILRSRRSSSTWSTV
Trigger: GACCGTGGACCAGGTGGAAGAACTGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AACCTCACGACAGCTTCTGCCTGCTCTACGGTCAGGCCCTGGATTTaGGGGGTGGAGCCAGCACTCAGCACAATCTCCTTCCCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: NLTTASACSTVRPWI*GVEPALSTISFPLR
Trigger: CCTCAGAGGGAAGGAGATTGTGCTGAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGTCGTGAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCAGGCATCTGGATGTCCTTGTGCCCGTCAACCTTGCACGCCAGCTaGAATTCACTGTCGAAGCTGCGGGTGGTGAACAGCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SGIWMSLCPSTLHAS*NSLSKLRVVNSRSR
Trigger: CCTGGAGCGGCTGTTCACCACCCGCAGCTTCGACAGTGAATTCAAGCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTCACCCAGCGCAGCTGTGTGAGGGGGAGGACTGTGGAGATGGCATaGGAGAGTGATAGCTTGTTGTTGCTGCACGTGGCCCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: FTQRSCVRGRTVEMA*ESDSLLLLHVAPWS
Trigger: GCTCCAAGGGGCCACGTGCAGCAACAACAAGCTATCACTCTCCAATGCCATCTCCACAGTCCTCCCCCTCACACAGCTGCGCTGGGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GAGCACCTCGGCCACTTTCATGTCTTGGGGTTCAGGTGCTTCTCCTaGGTTCTGTTGTGCGACTGCTGTGACCTGTGGCCTCAGGACCCT +
Preference number: 6 (lower is better)
Translates to: EHLGHFHVLGFRCFS*VLLCDCCDLWPQDP
Trigger: AGGGTCCTGAGGCCACAGGTCACAGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAACCCCAAGACATGAAAGTGGCCGAGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CCGCAGAGTAGGACTCTTCCAGGGCGACAGGGCCGTCGGGCATCCTaGTCAGTGCATTCCGATAGAACTTCTCTTCCTCCGTCAACTCGT +
Preference number: 6 (lower is better)
Translates to: PQSRTLPGRQGRRAS*SVHSDRTSLPPSTR
Trigger: ACGAGTTGACGGAGGAAGAGAAGTTCTATCGGAATGCACTGACAAGGATGCCCGACGGCCCTGTCGCCCTGGAAGAGTCCTACTCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCCATGAGGACAGAGTCCGCTAAGACGTTGAGTGTGACCTCCACATaGCTCAGCACAGACTGCAAGGGCCCCACATCACCACCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: SMRTESAKTLSVTST*LSTDCKGPTSPPPP
Trigger: TGGGGGAGGTGGTGATGTGGGGCCCTTGCAGTCTGTGCTGAGCAATGTGGAGGTCACACTCAACGTCTTAGCGGACTCTGTCCTCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AGTGCTTCAGTGGACCAGTCACCAAACCAGTTCAGCACACACCTGTaGAAAAGGGCTGGTGAGGTGGCCGCCCTGTCCTTGAGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: SASVDQSPNQFSTHL*KRAGEVAALSLSPS
Trigger: AGAGGGGCTCAAGGACAGGGCGGCCACCTCACCAGCCCTTTTCAACAGGTGTGTGCTGAACTGGTTTGGTGACTGGTCCACTGAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TCTCTGGAGATGGCCTCCACGAGACGCAGGGCCCGCTaGATCGGGTACTTCGTGTTGCGGATCTTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: SLEMASTRRRAR*IGYFVLRIFLR
Trigger: TCTGAGAAAGATCCGCAACACGAAGTACCCGATTCAGCGGGCCCTGCGTCTCGTGGAGGCCATCTCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CGTCCTTCAGCCGGCCGAACTTCCCTTCATATATGGTaGGGGCCTGAAGAGCCTCCTCAGGACGCAGATTGC +
Preference number: 6 (lower is better)
Translates to: RPSAGRTSLHIW*GPEEPPQDADC
Trigger: GCAATCTGCGTCCTGAGGAGGCTCTTCAGGCCCTCACCATATATGAAGGGAAGTTCGGCCGGCTGAAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp ACCAGCAGCACATCCTTGACGACAGCTTCGTTCTTCTaGAGGTCCACGTCCCAGATCTGGCCCAGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: TSSTSLTTASFF*RSTSQIWPSVS
Trigger: GCTGACGCTGGGCCAGATCTGGGACGTGGACCTTCAGAAGAACGAAGCTGTCGTCAAGGATGTGCTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CAGGCTTGGTCATCGCCAAGCTCCGGAAGAGCTTCTTaGGGTTGTCGGGGAGGTTTGAGCGACCTGCATAGC +
Preference number: 6 (lower is better)
Translates to: QAWSSPSSGRAS*GCRGGLSDLHS
Trigger: GCTATGCAGGTCGCTCAAACCTCCCCGACAACCTCAAGAAGCTCTTCCGGAGCTTGGCGATGACCAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CAGCAGCACTCGCCAGGCCATGCTCTTCCCACTTCCTaGAGGCCCAACCATCATCAGGCCGTGGTTAATCTG +
Preference number: 6 (lower is better)
Translates to: QQHSPGHALPTS*RPNHHQAVVNL
Trigger: CAGATTAACCACGGCCTGATGATGGTTGGGCCTTCAGGAAGTGGGAAGAGCATGGCCTGGCGAGTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTCTTGGGGTTCAGGTGCTTCTCCTTGGTTCTGTTGTaGGACTGCTGTGACCTGTGGCCTCAGGACCCTGAC +
Preference number: 6 (lower is better)
Translates to: VLGFRCFSLVLL*DCCDLWPQDPD
Trigger: GTCAGGGTCCTGAGGCCACAGGTCACAGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAACCCCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TCAGCTTCTGCCCTTCCACGTGGTTCTCCCAGCCTTTaGCCAGGACATCCTCCACTCGCTTCATGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: SASALPRGSPSL*PGHPPLASCRQ
Trigger: CTGCCTACATGAAGCGAGTGGAGGATGTCCTGGGCAAAGGCTGGGAGAACCACGTGGAAGGGCAGAAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TCCCACACCAACGCGATGCCTTCTGCGATTAAGGCCTaGACCTCCTTCTTTAGGCCGGCCACTAGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: SHTNAMPSAIKA*TSFFRPATSRE
Trigger: TTCCCTGCTAGTGGCCGGCCTAAAGAAGGAGGTGCAGGCCTTAATCGCAGAAGGCATCGCGTTGGTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTCGTCCACCTTCTCCTGGAAGTTGAAAACCGTCTCTaGCAGGCGCTGCACGTAGGGGTCGAGCTTGTAGGA +
Preference number: 6 (lower is better)
Translates to: VVHLLLEVENRL*QALHVGVELVG
Trigger: TCCTACAAGCTCGACCCCTACGTGCAGCGCCTGGCAGAGACGGTTTTCAACTTCCAGGAGAAGGTGGACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GAAAGACGAGCGCTCCCGTTCCAGGTACTCCCCCAATaGTTTCTGGATCTTCCCCAGCAGGTCTGCCAACCT +
Preference number: 6 (lower is better)
Translates to: ERRALPFQVLPQ*FLDLPQQVCQP
Trigger: AGGTTGGCAGACCTGCTGGGGAAGATCCAGAAAGCATTGGGGGAGTACCTGGAACGGGAGCGCTCGTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ACGTTGAGTGTGACCTCCACATTGCTCAGCACAGACTaGAAGGGCCCCACATCACCACCTCCCCCAACGTTG +
Preference number: 6 (lower is better)
Translates to: TLSVTSTLLSTD*KGPTSPPPPTL
Trigger: CAACGTTGGGGGAGGTGGTGATGTGGGGCCCTTGCAGTCTGTGCTGAGCAATGTGGAGGTCACACTCAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCCTCTCTAGAGCCTTCAGCAGCACTCGCCAGGCCATaGTCTTCCCACTTCCTGAAGGCCCAACCATCATCA +
Preference number: 6 (lower is better)
Translates to: ASLEPSAALARP*SSHFLKAQPSS
Trigger: TGATGATGGTTGGGCCTTCAGGAAGTGGGAAGAGCATGGCCTGGCGAGTGCTGCTGAAGGCTCTAGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ATCTGCATGGGGAAATCAGGATGGTTGGCATTGTACTaGGCCACGTTGCGGCAGGCCTGGTGCAGCATGGAG +
Preference number: 6 (lower is better)
Translates to: ICMGKSGWLALY*ATLRQAWCSME
Trigger: CTCCATGCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCTGAGCCGATGGCAATAGACGTGATCTGCGTGTTCTaGTCTGCTGCGAGGTCCTCAACATGTCCGCTGGCA +
Preference number: 6 (lower is better)
Translates to: AEPMAIDVICVF*SAARSSTCPLA
Trigger: TGCCAGCGGACATGTTGAGGACCTCGCAGCAGAGCAGAACACGCAGATCACGTCTATTGCCATCGGCTCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCTTTCCACATCCTTTGCTTCCACAGCTGCCAGGTCTaGCTTGATGGCCTGGGCCTCAGAGATGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: AFHILCFHSCQV*LDGLGLRDEDS
Trigger: GCTGTCCTCATCTCTGAGGCCCAGGCCATCAAGGCAGACCTGGCAGCTGTGGAAGCAAAGGATGTGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167395.2
CDS CCA 72 bp CATTCTCGTAGGCCAGGTTCACCTCCTCAATGGCGTTaGCGTCGGCAGCATCAAAGAGCACCTCGGCCACTT +
Preference number: 6 (lower is better)
Translates to: HSRRPGSPPQWR*RRQHQRAPRPL
Trigger: AAGTGGCCGAGGTGCTCTTTGATGCTGCCGACGCCAACGCCATTGAGGAGGTGAACCTGGCCTACGAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GCACCTCCTTCTTTAGGCCGGCCACTAGCAGGGAAATaGTATTGCGCTCCTCCACCTTCTCACAGGTGCGCT +
Preference number: 6 (lower is better)
Translates to: APPSLGRPLAGK*YCAPPPSHRCA
Trigger: AGCGCACCTGTGAGAAGGTGGAGGAGCGCAATACCATTTCCCTGCTAGTGGCCGGCCTAAAGAAGGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AATGCACTCCCACCTGGTACCTCTGGCTCTGGATCCTaGGCAGGGACAGCACAACCATCTTCCACGCGAACA +
Preference number: 6 (lower is better)
Translates to: NALPPGTSGSGS*AGTAQPSSTRT
Trigger: TGTTCGCGTGGAAGATGGTTGTGCTGTCCCTGCCCAGGATCCAGAGCCAGAGGTACCAGGTGGGAGTGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGCTTGATCCTCGCTAGCAGCATGGCGAAGGTGATGTaGTCCTGGTGCAGCATGCCTCGAGCCACTCGGTTA +
Preference number: 6 (lower is better)
Translates to: SLILASSMAKVM*SWCSMPRATRL
Trigger: TAACCGAGTGGCTCGAGGCATGCTGCACCAGGACCACATCACCTTCGCCATGCTGCTAGCGAGGATCAAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AGGACTCTTCCAGGGCGACAGGGCCGTCGGGCATCCTaGTCAGTGCATTCCGATAGAACTTCTCTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: RTLPGRQGRRAS*SVHSDRTSLPP
Trigger: CGGAGGAAGAGAAGTTCTATCGGAATGCACTGACAAGGATGCCCGACGGCCCTGTCGCCCTGGAAGAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TGCTCAATCTGCATGGGGAAATCAGGATGGTTGGCATaGTACTGCGCCACGTTGCGGCAGGCCTGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: CSICMGKSGWLA*YCATLRQAWCS
Trigger: GCTGCACCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGATTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCCAGCTGCTCAATCTGCATGGGGAAATCAGGATGGTaGGCATTGTACTGCGCCACGTTGCGGCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSCSICMGKSGW*ALYCATLRQAW
Trigger: CCAGGCCTGCCGCAACGTGGCGCAGTACAATGCCAACCATCCTGATTTCCCCATGCAGATTGAGCAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACAGCTTCTGCCTGCTCTACGGTCAGGCCCTGGATTTaGGGGGTGGAGCCAGCACTCAGCACAATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TASACSTVRPWI*GVEPALSTISF
Trigger: GAAGGAGATTGTGCTGAGTGCTGGCTCCACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CGTGGTCCGGCTTTCCACAGCTCTGTCCTCCTGTACGATCTTCATTaGCAGGTTTGCCACCTGTTGCTGAATGGCAGAGTCCTTCCGCCG +
Preference number: 6 (lower is better)
Translates to: RGPAFHSSVLLYDLH*QVCHLLLNGRVLPP
Trigger: CGGCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGATCGTACAGGAGGACAGAGCTGTGGAAAGCCGGACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GTCATGGTCTTGCCAGACCCAGGAGGGCCACATAAGACCAGGGGTTaGTGTTCAGCCAGCCAAGTGTACAGGAGAGCTTCATGGCGGACT +
Preference number: 6 (lower is better)
Translates to: VMVLPDPGGPHKTRG*CSASQVYRRASWRT
Trigger: AGTCCGCCATGAAGCTCTCCTGTACACTTGGCTGGCTGAACACAAACCCCTGGTCTTATGTGGCCCTCCTGGGTCTGGCAAGACCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCCATGTCAGGCAAGGCCCGGAGAGCACTGAAGAGTGTCATGGTCTaGCCAGACCCAGGAGGGCCACATAAGACCAGGGGTTTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: SMSGKARRALKSVMV*PDPGGPHKTRGLCS
Trigger: TGAACACAAACCCCTGGTCTTATGTGGCCCTCCTGGGTCTGGCAAGACCATGACACTCTTCAGTGCTCTCCGGGCCTTGCCTGACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CGGGCAATGCTGGCTTCCAGGTCCCTGATCATCTGCTCCACCTCATaGGCTTTCTGCTGGTTGTCCTTGGCGTCATCTTCCAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RAMLASRSLIICSTS*AFCWLSLASSSSFC
Trigger: GCAGAAGCTGGAAGATGACGCCAAGGACAACCAGCAGAAAGCCAATGAGGTGGAGCAGATGATCAGGGACCTGGAAGCCAGCATTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CAA 90 bp CGCCTGATACCATCAGGCATCTGGATGTCCTTGTGCCCGTCAACCTaGCACGCCAGCTTGAATTCACTGTCGAAGCTGCGGGTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: RLIPSGIWMSLCPST*HASLNSLSKLRVVN
Trigger: GTTCACCACCCGCAGCTTCGACAGTGAATTCAAGCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGATGGTATCAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CCAAAGCTGCAGGCATCAAGGGTGGCACTCTGTGAGGCGGTGACATaGACTTCCAGGCAGAGTTCCTCCAGGGACCAGCTGTTAGCTTGT +
Preference number: 6 (lower is better)
Translates to: PKLQASRVALCEAVT*TSRQSSSRDQLLAC
Trigger: ACAAGCTAACAGCTGGTCCCTGGAGGAACTCTGCCTGGAAGTCAATGTCACCGCCTCACAGAGTGCCACCCTTGATGCCTGCAGCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp AGTGCAGTGTCTCATACGGCGAGTCTTCACTCAGAGTaGGGACTCGGAGCTGGGACGACACTGGCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: SAVSHTASLHSE*GLGAGTTLACL
Trigger: CAGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCACTCTGAGTGAAGACTCGCCGTATGAGACACTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp AGCCGGCCGAACTTCCCTTCATATATGGTGAGGGCCTaGAGAGCCTCCTCAGGACGCAGATTGCCTGTGACA +
Preference number: 6 (lower is better)
Translates to: SRPNFPSYMVRA*RASSGRRLPVT
Trigger: TGTCACAGGCAATCTGCGTCCTGAGGAGGCTCTTCAGGCCCTCACCATATATGAAGGGAAGTTCGGCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GGTACTGGACTCCAGGAAACACGTCAGACAGGAGGCTaGAGAGCAGCGGGATATCTTCTGCCACCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: GTGLQETRQTGG*RAAGYLLPPAW
Trigger: CCAAGCTGGTGGCAGAAGATATCCCGCTGCTCTTCAGCCTCCTGTCTGACGTGTTTCCTGGAGTCCAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TCAGGAGCACCTCGGGGCTCTCCCGCTTCTCTTGGATaGGGTACAACGCACGTTCCAAGTTTAGCCAAAAGC +
Preference number: 6 (lower is better)
Translates to: SGAPRGSPASLG*GTTHVPSLAKS
Trigger: GCTTTTGGCTAAACTTGGAACGTGCGTTGTACCGCATCCAAGAGAAGCGGGAGAGCCCCGAGGTGCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TTCATTCGGAAGCTGTCTCCATCCTGCTTCAGCTTCTaGCCTTCCACGTGGTTCTCCCAGCCTTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: FIRKLSPSCFSF*PSTWFSQPLPR
Trigger: CCTGGGCAAAGGCTGGGAGAACCACGTGGAAGGGCAGAAGCTGAAGCAGGATGGAGACAGCTTCCGAATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CCTTCTTTAGGCCGGCCACTAGCAGGGAAATGGTATTaGGCTCCTCCACCTTCTCACAGGTGCGCTCGTAAG +
Preference number: 6 (lower is better)
Translates to: PSLGRPLAGKWY*APPPSHRCARK
Trigger: CTTACGAGCGCACCTGTGAGAAGGTGGAGGAGCGCAATACCATTTCCCTGCTAGTGGCCGGCCTAAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CCAAGAAGAACCTGGGTCCAAGCTCGAAGGCCAGCTTaGAGGCGGACGCCCAGTATCCTTTCAATCTCCATG +
Preference number: 6 (lower is better)
Translates to: PRRTWVQARRPA*RRTPSILSISM
Trigger: CATGGAGATTGAAAGGATACTGGGCGTCCGCCTGCAAGCTGGCCTTCGAGCTTGGACCCAGGTTCTTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TTCCAGGGCGACAGGGCCGTCGGGCATCCTTGTCAGTaGATTCCGATAGAACTTCTCTTCCTCCGTCAACTC +
Preference number: 6 (lower is better)
Translates to: FQGDRAVGHPCQ*IPIELLFLRQL
Trigger: GAGTTGACGGAGGAAGAGAAGTTCTATCGGAATGCACTGACAAGGATGCCCGACGGCCCTGTCGCCCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ATCAAGTGCTCCAGCTTCCGTCTCCGGAGAGGAGGCTaGTCCATGAGGACAGAGTCCGCTAAGACGTTGAGT +
Preference number: 6 (lower is better)
Translates to: IKCSSFRLRRGG*SMRTESAKTLS
Trigger: ACTCAACGTCTTAGCGGACTCTGTCCTCATGGAGCAGCCTCCTCTCCGGAGACGGAAGCTGGAGCACTTGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GGTCTTGTCGTAGTTGGGGTTGGAATGCTCCCGCAGTaGCTCTTGTATGCACTGCACCTGCTGGGATACAGC +
Preference number: 6 (lower is better)
Translates to: GLVVVGVGMLPQ*LLYALHLLGYS
Trigger: GCTGTATCCCAGCAGGTGCAGTGCATACAAGAGGCACTGCGGGAGCATTCCAACCCCAACTACGACAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTCAGACAGGAGGCTGAAGAGCAGCGGGATATCTTCTaGCACCAGCTTGGGCACCATTGTCTCGCAGACACT +
Preference number: 6 (lower is better)
Translates to: VRQEAEEQRDIF*HQLGHHCLADT
Trigger: AGTGTCTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAGATATCCCGCTGCTCTTCAGCCTCCTGTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GGTATAGAACTCCACCATGGCGGCAGTGAGGGGTTCTaGATAGGTACGGAGCGAGGGAATGAGCCTCAGCAT +
Preference number: 6 (lower is better)
Translates to: GIELHHGGSEGF*IGTERGNEPQH
Trigger: ATGCTGAGGCTCATTCCCTCGCTCCGTACCTATGCAGAACCCCTCACTGCCGCCATGGTGGAGTTCTATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AAATGCAGGCAGACAGCTCAACCTCACGACAGCTTCTaGCTGCTCTACGGTCAGGCCCTGGATTTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: KCRQTAQPHDSF*LLYGQALDFGG
Trigger: ACCCCCAAAATCCAGGGCCTGACCGTAGAGCAGGCAGAAGCTGTCGTGAGGTTGAGCTGTCTGCCTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CAGGCAGAGTTCCTCCAGGGACCAGCTGTTAGCTTGTaGCACATACTGTCTGGTGGCAGTGATGTAGGCCTC +
Preference number: 6 (lower is better)
Translates to: QAEFLQGPAVSL*HILSGGSDVGL
Trigger: GAGGCCTACATCACTGCCACCAGACAGTATGTGGCACAAGCTAACAGCTGGTCCCTGGAGGAACTCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGAGTCAGGAGCACCTCGGGGCTCTCCCGCTTCTCTTaGATGCGGTACAACGCACGTTCCAAGTTTAGCCAA +
Preference number: 6 (lower is better)
Translates to: RVRSTSGLSRFS*MRYNARSKFSQ
Trigger: TTGGCTAAACTTGGAACGTGCGTTGTACCGCATCCAAGAGAAGCGGGAGAGCCCCGAGGTGCTCCTGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCACACGTTGGATCAGCTGGGTCTGGTATTCACGAATaGCCCCTCGGATGTGTGGGCGGACGAACAGTGCAT +
Preference number: 6 (lower is better)
Translates to: SHVGSAGSGIHE*PLGCVGGRTVH
Trigger: ATGCACTGTTCGTCCGCCCACACATCCGAGGGGCCATTCGTGAATACCAGACCCAGCTGATCCAACGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCTTCTCGAAGGGCTGTCATCTCCCCACGGTGGTACTaGACTCCAGGAAACACGTCAGACAGGAGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: SSRRAVISPRWY*TPGNTSDRRLK
Trigger: CTTCAGCCTCCTGTCTGACGTGTTTCCTGGAGTCCAGTACCACCGTGGGGAGATGACAGCCCTTCGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TTCAGCTCTTCTCGAAGGGCTGTCATCTCCCCACGGTaGTACTGGACTCCAGGAAACACGTCAGACAGGAGG +
Preference number: 6 (lower is better)
Translates to: FSSSRRAVISPR*YWTPGNTSDRR
Trigger: CCTCCTGTCTGACGTGTTTCCTGGAGTCCAGTACCACCGTGGGGAGATGACAGCCCTTCGAGAAGAGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGGTGGTCTTTGCTGATGGCCTTGGGGTCAATTATGTaGGCCACGCCCTCCACACCCTCAAGCCTCTCTAGA +
Preference number: 6 (lower is better)
Translates to: RWSLLMALGSIM*ATPSTPSSLSR
Trigger: TCTAGAGAGGCTTGAGGGTGTGGAGGGCGTGGCCCACATAATTGACCCCAAGGCCATCAGCAAAGACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TTGTCATTGGCCGCTGCGTTCTTGACCTCCAGCTCTTaGCTCTTGATCCTCAGGTCACGGCGCAGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LSLAAAFLTSSS*LLILRSRRSSS
Trigger: GGAAGAACTGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp ATGAAGGACTCTCCGAGGTTTGTGGAAACAAACATGTaGGCCATGGCCAACAGGCGGTCGGGTCGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: MKDSPRFVETNM*AMANRRSGRKA
Trigger: AGCCTTCCGACCCGACCGCCTGTTGGCCATGGCCCACATGTTTGTTTCCACAAACCTCGGAGAGTCCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TGTTCTGCTCTGCTGCGAGGTCCTCAACATGTCCGCTaGCATCATACCCAGGCACAGAGCACATCAGGACAG +
Preference number: 6 (lower is better)
Translates to: CSALLRGPQHVR*HHTQAQSTSGQ
Trigger: CTGTCCTGATGTGCTCTGTGCCTGGGTATGATGCCAGCGGACATGTTGAGGACCTCGCAGCAGAGCAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TGCACAAACTCCTCTCGCCTGATACCATCAGGCATCTaGATGTCCTTGTGCCCGTCAACCTTGCACGCCAGC +
Preference number: 6 (lower is better)
Translates to: CTNSSRLIPSGI*MSLCPSTLHAS
Trigger: GCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGATGGTATCAGGCGAGAGGAGTTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CATGTCTTGGGGTTCAGGTGCTTCTCCTTGGTTCTGTaGTGCGACTGCTGTGACCTGTGGCCTCAGGACCCT +
Preference number: 6 (lower is better)
Translates to: HVLGFRCFSLVL*CDCCDLWPQDP
Trigger: AGGGTCCTGAGGCCACAGGTCACAGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAACCCCAAGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GGAGGCTGCTCCATGAGGACAGAGTCCGCTAAGACGTaGAGTGTGACCTCCACATTGCTCAGCACAGACTGC +
Preference number: 6 (lower is better)
Translates to: GGCSMRTESAKT*SVTSTLLSTDC
Trigger: GCAGTCTGTGCTGAGCAATGTGGAGGTCACACTCAACGTCTTAGCGGACTCTGTCCTCATGGAGCAGCCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTTGTCATTGGCCGCTGCGTTCTTGACCTCCAGCTCTaGGCTCTTGATCCTCAGGTCACGGCGCAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LVIGRCVLDLQL*ALDPQVTAQFF
Trigger: GAAGAACTGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTGGCCATGGACCTCACCTCCACCAGGTGCTGCTTCTaGATGGACTTCACAGCGTTCTGGGCCTCGATGACA +
Preference number: 6 (lower is better)
Translates to: LAMDLTSTRCCF*MDFTAFWASMT
Trigger: TGTCATCGAGGCCCAGAACGCTGTGAAGTCCATCAAGAAGCAGCACCTGGTGGAGGTGAGGTCCATGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TGGATGTCCTTGTGCCCGTCAACCTTGCACGCCAGCTaGAATTCACTGTCGAAGCTGCGGGTGGTGAACAGC +
Preference number: 6 (lower is better)
Translates to: WMSLCPSTLHAS*NSLSKLRVVNS
Trigger: GCTGTTCACCACCCGCAGCTTCGACAGTGAATTCAAGCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CCATCAGGCATCTGGATGTCCTTGTGCCCGTCAACCTaGCACGCCAGCTTGAATTCACTGTCGAAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: PSGIWMSLCPST*HASLNSLSKLR
Trigger: CCGCAGCTTCGACAGTGAATTCAAGCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GAGTCTTCACTCAGAGTGAGGACTCGGAGCTGGGACGACACTGGCTaGTCTGCATCAATCACAGGAGCTCGCTTGATGAACGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: ESSLRVRTRSWDDTG*SASITGARLMNAKL
Trigger: CAGCTTGGCGTTCATCAAGCGAGCTCCTGTGATTGATGCAGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCACTCTGAGTGAAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GTTGGCGTCGGCAGCATCAAAGAGCACCTCGGCCACTTTCATGTCTaGGGGTTCAGGTGCTTCTCCTTGGTTCTGTTGTGCGACTGCTGT +
Preference number: 6 (lower is better)
Translates to: VGVGSIKEHLGHFHV*GFRCFSLVLLCDCC
Trigger: ACAGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAACCCCAAGACATGAAAGTGGCCGAGGTGCTCTTTGATGCTGCCGACGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CTCAGCTTGTCCAAGAAGAACCTGGGTCCAAGCTCGAAGGCCAGCTaGCAGGCGGACGCCCAGTATCCTTTCAATCTCCATGTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: LSLSKKNLGPSSKAS*QADAQYPFNLHVQL
Trigger: AAGCTGGACATGGAGATTGAAAGGATACTGGGCGTCCGCCTGCAAGCTGGCCTTCGAGCTTGGACCCAGGTTCTTCTTGGACAAGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCAGACAGGAGGCTGAAGAGCAGCGGGATATCTTCTGCCACCAGCTaGGGCACCATTGTCTCGCAGACACTCTGGATCAGAATCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SDRRLKSSGISSATS*GTIVSQTLWIRISC
Trigger: GCAGGAGATTCTGATCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAGATATCCCGCTGCTCTTCAGCCTCCTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CCAGCCAAGTGTACAGGAGAGCTTCATGGCGGACTGTATCTAAGGTaGGCACGACGACATCTGGGGCTGCCACCTTGTGTGTCTCCACTT +
Preference number: 6 (lower is better)
Translates to: PAKCTGELHGGLYLR*ARRHLGLPPCVSPL
Trigger: AAGTGGAGACACACAAGGTGGCAGCCCCAGATGTCGTCGTGCCAACCTTAGATACAGTCCGCCATGAAGCTCTCCTGTACACTTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTTCTTCAGCTTGTCATTGGCCGCTGCGTTCTTGACCTCCAGCTCTaGGCTCTTGATCCTCAGGTCACGGCGCAGTTCTTCCACCTGGTC +
Preference number: 6 (lower is better)
Translates to: FLQLVIGRCVLDLQL*ALDPQVTAQFFHLV
Trigger: GACCAGGTGGAAGAACTGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCCCTGATCATCTGCTCCACCTCATTGGCTTTCTGCTGGTTGTCCTaGGCGTCATCTTCCAGCTTCTGCAGCTCATTCCTCAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SLIICSTSLAFCWLS*ASSSSFCSSFLRGS
Trigger: GGAGCCCCTGAGGAATGAGCTGCAGAAGCTGGAAGATGACGCCAAGGACAACCAGCAGAAAGCCAATGAGGTGGAGCAGATGATCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CAA 90 bp CTCCAGCATCTGCATCTTCAGCATCTTGCTGATCATGTCCACGCCTaGGGTGGTAAGCAGGACCCTTTCAGCATTGTTGGGGAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LQHLHLQHLADHVHA*GGKQDPFSIVGEAQ
Trigger: CTGGGCCTCCCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGTGGACATGATCAGCAAGATGCTGAAGATGCAGATGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CTTTCTCCTCTTCTCCTTCATCACCAACATCCTCTTTaGGGGTGGAGCGCTCCACCAGGACCGTGTGGACCT +
Preference number: 6 (lower is better)
Translates to: LSPLLLHHQHPL*GWSAPPGPCGP
Trigger: AGGTCCACACGGTCCTGGTGGAGCGCTCCACCCTCAAAGAGGATGTTGGTGATGAAGGAGAAGAGGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GGGCCTGAAGAGCCTCCTCAGGACGCAGATTGCCTGTaGCAGGTTTGGTCTTCTCCCAGTCTGTCAACAGAT +
Preference number: 6 (lower is better)
Translates to: GPEEPPQDADCL*QVWSSPSLSTD
Trigger: ATCTGTTGACAGACTGGGAGAAGACCAAACCTGTCACAGGCAATCTGCGTCCTGAGGAGGCTCTTCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GCCTCTGCACGTCAATCCACACGTCAAAGAGAGCCATaGTTCGGTTCAGCTTGTCCTCCCAGCTCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: ASARQSTRQREP*FGSACPPSSGH
Trigger: ATGCCCTGAGCTGGGAGGACAAGCTGAACCGAATCATGGCTCTCTTTGACGTGTGGATTGACGTGCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TCGTCACAGTTGAAAACTAAGACGAACCGCCCCAGCTaGTGGCCGAGGGCTTTGACGGACTCTGTCTTTCCG +
Preference number: 6 (lower is better)
Translates to: SSQLKTKTNRPS*WPRALTDSVFP
Trigger: CGGAAAGACAGAGTCCGTCAAAGCCCTCGGCCATCAGCTGGGGCGGTTCGTCTTAGTTTTCAACTGTGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTGTCAAAACTGACAGTGGCATGGAAACGTTTGCCGTaGTTCAGGATGTCCAGAGTCAGGAGCACCTCGGGG +
Preference number: 6 (lower is better)
Translates to: VSKLTVAWKRLP*FRMSRVRSTSG
Trigger: CCCCGAGGTGCTCCTGACTCTGGACATCCTGAAGCACGGCAAACGTTTCCATGCCACTGTCAGTTTTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GAGCACCTCGGCCACTTTCATGTCTTGGGGTTCAGGTaGTTCTCCTTGGTTCTGTTGTGCGACTGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: EHLGHFHVLGFR*FSLVLLCDCCD
Trigger: GTCACAGCAGTCGCACAACAGAACCAAGGAGAAGCACCTGAACCCCAAGACATGAAAGTGGCCGAGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GGGAAATGGTATTGCGCTCCTCCACCTTCTCACAGGTaGGCTCGTAAGTCCGGACGCTTTCAATCAGCGAGA +
Preference number: 6 (lower is better)
Translates to: GKWYCAPPPSHR*ARKSGRFQSAR
Trigger: TCTCGCTGATTGAAAGCGTCCGGACTTACGAGCGCACCTGTGAGAAGGTGGAGGAGCGCAATACCATTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AGGGGTCGAGCTTGTAGGACTCCCACACCAACGCGATaGCTTCTGCGATTAAGGCCTGCACCTCCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: RGRACRTPTPTR*LLRLRPAPPSL
Trigger: TAAAGAAGGAGGTGCAGGCCTTAATCGCAGAAGGCATCGCGTTGGTGTGGGAGTCCTACAAGCTCGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GGGATGAAGTTCTCTCTCATGATGATGGAGCGGATCTaGTTCCAGTCCGTGGTGCTCTCACCAAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GMKFSLMMMERI*FQSVVLSPSSR
Trigger: CCTGCTGCTTGGTGAGAGCACCACGGACTGGAAGCAGATCCGCTCCATCATCATGAGAGAGAACTTCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS GCA 72 bp GAGGCGTTCGTCAGCATTGGAGAGGTACTCCGTCCTTaGAATGTCTGTGCGGAACTGGATGTTGGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: EAFVSIGEVLRP*NVCAELDVGLL
Trigger: CAGCAAGCCAACATCCAGTTCCGCACAGACATTGCAAGGACGGAGTACCTCTCCAATGCTGACGAACGCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTAGGCGTTTCCTCGCTCCAGAGGTATGGCACGGTCTaGTCTGGTGAACTGCTATCCAGCCAAATGCCAAAC +
Preference number: 6 (lower is better)
Translates to: VGVSSLQRYGTV*SGELLSSQMPN
Trigger: GTTTGGCATTTGGCTGGATAGCAGTTCACCAGAGCAGACCGTGCCATACCTCTGGAGCGAGGAAACGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ACCTCTGTGCCCACAATGTGGGTGAGGTCGAGAGGCTaGTCCATGATGGACATGAAGGACTCTCCGAGGTTT +
Preference number: 6 (lower is better)
Translates to: TSVPTMWVRSRG*SMMDMKDSPRF
Trigger: AAACCTCGGAGAGTCCTTCATGTCCATCATGGAGCAGCCTCTCGACCTCACCCACATTGTGGGCACAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GATGGCAATAGACGTGATCTGCGTGTTCTGCTCTGCTaGGAGGTCCTCAACATGTCCGCTGGCATCATACCC +
Preference number: 6 (lower is better)
Translates to: DGNRRDLRVLLC*EVLNMSAGIIP
Trigger: GGGTATGATGCCAGCGGACATGTTGAGGACCTCGCAGCAGAGCAGAACACGCAGATCACGTCTATTGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCCGATGGCAATAGACGTGATCTGCGTGTTCTGCTCTaGTGCGAGGTCCTCAACATGTCCGCTGGCATCATA +
Preference number: 6 (lower is better)
Translates to: ADGNRRDLRVLL*CEVLNMSAGII
Trigger: TATGATGCCAGCGGACATGTTGAGGACCTCGCAGCAGAGCAGAACACGCAGATCACGTCTATTGCCATCGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TACGGCGAGTCTTCACTCAGAGTGAGGACTCGGAGCTaGGACGACACTGGCTTGTCTGCATCAATCACAGGA +
Preference number: 6 (lower is better)
Translates to: YGESSLRVRTRS*DDTGLSASITG
Trigger: TCCTGTGATTGATGCAGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCACTCTGAGTGAAGACTCGCCGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCGATGTCATCTTTCACACGTTGGATCAGCTGGGTCTaGTATTCACGAATGGCCCCTCGGATGTGTGGGCGG +
Preference number: 6 (lower is better)
Translates to: SMSSFTRWISWV*YSRMAPRMCGR
Trigger: CCGCCCACACATCCGAGGGGCCATTCGTGAATACCAGACCCAGCTGATCCAACGTGTGAAAGATGACATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CTGGTTGGCTTGGTGAGCCTTGTTCACAATTGCAAGTaGCACTCGGAAGCCAAGCCACTTGAGGTTCCGGAC +
Preference number: 6 (lower is better)
Translates to: LVGLVSLVHNCK*HSEAKPLEVPD
Trigger: GTCCGGAACCTCAAGTGGCTTGGCTTCCGAGTGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TGCGCTCGTAAGTCCGGACGCTTTCAATCAGCGAGATaGCAAATGGGTAGAGCTGGTTGGCTTGGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: CARKSGRFQSAR*QMGRAGWLGEP
Trigger: AGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAAGCGTCCGGACTTACGAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGGGACAGCACAACCATCTTCCACGCGAACATCTCCTaGTACAGCTTGTACCTGCACTCCTCAATGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RDSTTIFHANIS*YSLYLHSSMGG
Trigger: CCCACCCATTGAGGAGTGCAGGTACAAGCTGTACCAGGAGATGTTCGCGTGGAAGATGGTTGTGCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CAGGTTTGGTCTTCTCCCAGTCTGTCAACAGATCCGTaGTCCGGCTTTCCACAGCTCTGTCCTCCTGTACGA +
Preference number: 6 (lower is better)
Translates to: QVWSSPSLSTDP*SGFPQLCPPVR
Trigger: TCGTACAGGAGGACAGAGCTGTGGAAAGCCGGACCACGGATCTGTTGACAGACTGGGAGAAGACCAAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CGGTTCCAGCAGGTCCAAATGGGGAGCCCCCAAGCCTaGCCTCCAAAGCTTGTGTCATTGTCAAATAGCAAC +
Preference number: 6 (lower is better)
Translates to: RFQQVQMGSPQA*PPKLVSLSNSN
Trigger: GTTGCTATTTGACAATGACACAAGCTTTGGAGGCCAGGCTTGGGGGCTCCCCATTTGGACCTGCTGGAACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GCCACCAGCTTGGGCACCATTGTCTCGCAGACACTCTaGATCAGAATCTCCTGCTCAGGTAGGTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: ATSLGTIVSQTL*IRISCSGRFSA
Trigger: TGCTGAGAACCTACCTGAGCAGGAGATTCTGATCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCTGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp ACCAGGTGCTGCTTCTTGATGGACTTCACAGCGTTCTaGGCCTCGATGACAGCAGGCTCCACTTTATCCAGG +
Preference number: 6 (lower is better)
Translates to: TRCCFLMDFTAF*ASMTAGSTLSR
Trigger: CCTGGATAAAGTGGAGCCTGCTGTCATCGAGGCCCAGAACGCTGTGAAGTCCATCAAGAAGCAGCACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGAGGCGCTGTGTGTGATCGGTGGCACCCTTCAGGTTaGGGTTCTCATACAGCACGTTGTGGTAGATGTCCA +
Preference number: 6 (lower is better)
Translates to: RGAVCDRWHPSG*GSHTARCGRCP
Trigger: TGGACATCTACCACAACGTGCTGTATGAGAACCCCAACCTGAAGGGTGCCACCGATCACACACAGCGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp ACAGGTGTGTTTGGCTTCACCTCTGTGCCCACAATGTaGGTGAGGTCGAGAGGCTGCTCCATGATGGACATG +
Preference number: 6 (lower is better)
Translates to: TGVFGFTSVPTM*VRSRGCSMMDM
Trigger: CATGTCCATCATGGAGCAGCCTCTCGACCTCACCCACATTGTGGGCACAGAGGTGAAGCCAAACACACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTCAGAGTGAGGACTCGGAGCTGGGACGACACTGGCTaGTCTGCATCAATCACAGGAGCTCGCTTGATGAAC +
Preference number: 6 (lower is better)
Translates to: LRVRTRSWDDTG*SASITGARLMN
Trigger: GTTCATCAAGCGAGCTCCTGTGATTGATGCAGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCACTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCCAAGAAGAACCTGGGTCCAAGCTCGAAGGCCAGCTaGCAGGCGGACGCCCAGTATCCTTTCAATCTCCAT +
Preference number: 6 (lower is better)
Translates to: SKKNLGPSSKAS*QADAQYPFNLH
Trigger: ATGGAGATTGAAAGGATACTGGGCGTCCGCCTGCAAGCTGGCCTTCGAGCTTGGACCCAGGTTCTTCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AGAGCCTCCTCAGGACGCAGATTGCCTGTGACAGGTTaGGTCTTCTCCCAGTCTGTCAACAGATCCGTGGTC +
Preference number: 6 (lower is better)
Translates to: RASSGRRLPVTG*VFSQSVNRSVV
Trigger: GACCACGGATCTGTTGACAGACTGGGAGAAGACCAAACCTGTCACAGGCAATCTGCGTCCTGAGGAGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TGCTCATCACACAGTTTGAAGAACGGGACGATCTTGTaGGCAAGGACCTCAGCAGTCCGGAAGCCCTGCGAG +
Preference number: 6 (lower is better)
Translates to: CSSHSLKNGTIL*ARTSAVRKPCE
Trigger: CTCGCAGGGCTTCCGGACTGCTGAGGTCCTTGCCAACAAGATCGTCCCGTTCTTCAAACTGTGTGATGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GCAGCGGGATATCTTCTGCCACCAGCTTGGGCACCATaGTCTCGCAGACACTCTGGATCAGAATCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: AAGYLLPPAWAP*SRRHSGSESPA
Trigger: AGCAGGAGATTCTGATCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAGATATCCCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AGGCTGAAGAGCAGCGGGATATCTTCTGCCACCAGCTaGGGCACCATTGTCTCGCAGACACTCTGGATCAGA +
Preference number: 6 (lower is better)
Translates to: RLKSSGISSATS*GTIVSQTLWIR
Trigger: TCTGATCCAGAGTGTCTGCGAGACAATGGTGCCCAAGCTGGTGGCAGAAGATATCCCGCTGCTCTTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TGTACAGGAGAGCTTCATGGCGGACTGTATCTAAGGTaGGCACGACGACATCTGGGGCTGCCACCTTGTGTG +
Preference number: 6 (lower is better)
Translates to: CTGELHGGLYLR*ARRHLGLPPCV
Trigger: CACACAAGGTGGCAGCCCCAGATGTCGTCGTGCCAACCTTAGATACAGTCCGCCATGAAGCTCTCCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GGAGGCGTTCGTCAGCATTGGAGAGGTACTCCGTCCTaGCAATGTCTGTGCGGAACTGGATGTTGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: GGVRQHWRGTPS*QCLCGTGCWLA
Trigger: AGCAAGCCAACATCCAGTTCCGCACAGACATTGCAAGGACGGAGTACCTCTCCAATGCTGACGAACGCCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTCCAGGCAGAGTTCCTCCAGGGACCAGCTGTTAGCTaGTGCCACATACTGTCTGGTGGCAGTGATGTAGGC +
Preference number: 6 (lower is better)
Translates to: FQAEFLQGPAVS*CHILSGGSDVG
Trigger: GCCTACATCACTGCCACCAGACAGTATGTGGCACAAGCTAACAGCTGGTCCCTGGAGGAACTCTGCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GACATTGACTTCCAGGCAGAGTTCCTCCAGGGACCAGCTGTTAGCTaGTGCCACATACTGTCTGGTGGCAGTGATGTAGGCCTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: DIDFQAEFLQGPAVS*CHILSGGSDVGLRY
Trigger: GTACCTGAGGCCTACATCACTGCCACCAGACAGTATGTGGCACAAGCTAACAGCTGGTCCCTGGAGGAACTCTGCCTGGAAGTCAATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp AGGCTACATGCATCAACTTCCGAGTGCCCAAGACCTTaGGCAGCTGAGAACTCAGGTCTCTGGAGATGGCCT +
Preference number: 6 (lower is better)
Translates to: RLHASTSECPRP*AAENSGLWRWP
Trigger: AGGCCATCTCCAGAGACCTGAGTTCTCAGCTGCTCAAGGTCTTGGGCACTCGGAAGTTGATGCATGTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CACGGCGCAGTTCTTCCACCTGGTCCACGGTCTCTTTaGTTTTTCGGAGCCCAACATTCAGGTGCATCTGCT +
Preference number: 6 (lower is better)
Translates to: HGAVLPPGPRSL*FFGAQHSGASA
Trigger: AGCAGATGCACCTGAATGTTGGGCTCCGAAAAATCAAAGAGACCGTGGACCAGGTGGAAGAACTGCGCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp AAGAGGTCCTTGGTTATGATGGAGAGGCGCTGTGTGTaGTCGGTGGCACCCTTCAGGTTGGGGTTCTCATAC +
Preference number: 6 (lower is better)
Translates to: KRSLVMMERRCV*SVAPFRLGFSY
Trigger: GTATGAGAACCCCAACCTGAAGGGTGCCACCGATCACACACAGCGCCTCTCCATCATAACCAAGGACCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TTCCTCGCTCCAGAGGTATGGCACGGTCTGCTCTGGTaGACTGCTATCCAGCCAAATGCCAAACTGCTCATC +
Preference number: 6 (lower is better)
Translates to: FLAPEVWHGLLW*TAIQPNAKLLI
Trigger: GATGAGCAGTTTGGCATTTGGCTGGATAGCAGTTCACCAGAGCAGACCGTGCCATACCTCTGGAGCGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CGAGACACCGTGGCCAGCGTCGCGTATTTCAAGTCCTaGACTTCAAACATTATTCGCACATTGGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RDTVASVAYFKS*TSNIIRTLGGR
Trigger: CCTGCCTCCCAATGTGCGAATAATGTTTGAAGTGCAGGACTTGAAATACGCGACGCTGGCCACGGTGTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCCGTTGGACGTGAAGTACGGCTGCATGATCGTTGCTaGATCTCTTTGAATCTGCAGCATTGGAGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: AVGREVRLHDRC*ISLNLQHWRSG
Trigger: GCCGCTTCTCCAATGCTGCAGATTCAAAGAGATGCAGCAACGATCATGCAGCCGTACTTCACGTCCAACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AAGCCTTCTGCTGAGCCGATGGCAATAGACGTGATCTaGGTGTTCTGCTCTGCTGCGAGGTCCTCAACATGT +
Preference number: 6 (lower is better)
Translates to: KPSAEPMAIDVI*VFCSAARSSTC
Trigger: ACATGTTGAGGACCTCGCAGCAGAGCAGAACACGCAGATCACGTCTATTGCCATCGGCTCAGCAGAAGGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TTCACTCAGAGTGAGGACTCGGAGCTGGGACGACACTaGCTTGTCTGCATCAATCACAGGAGCTCGCTTGAT +
Preference number: 6 (lower is better)
Translates to: FTQSEDSELGRH*LVCINHRSSLD
Trigger: ATCAAGCGAGCTCCTGTGATTGATGCAGACAAGCCAGTGTCGTCCCAGCTCCGAGTCCTCACTCTGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CTGGGTCTGGTATTCACGAATGGCCCCTCGGATGTGTaGGCGGACGAACAGTGCATTGAACCTGGAGAAAAT +
Preference number: 6 (lower is better)
Translates to: LGLVFTNGPSDV*ADEQCIEPGEN
Trigger: ATTTTCTCCAGGTTCAATGCACTGTTCGTCCGCCCACACATCCGAGGGGCCATTCGTGAATACCAGACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GCATACTGCCGAAGCCTCGCAGGGAAGTTCTTCAGCTaGTTCAAGAGGCCGTCTAGGTTTTGTCGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: AYCRSLAGKFFS*FKRPSRFCRSF
Trigger: GAAGCTTCGACAAAACCTAGACGGCCTCTTGAACCAGCTGAAGAACTTCCCTGCGAGGCTTCGGCAGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCTCAAGCAAATCCTCATCACCCACAAAGTAGAACCTaGGGAAAGACGAGCGCTCCCGTTCCAGGTACTCCC +
Preference number: 6 (lower is better)
Translates to: SQANPHHPQSRT*GKTSAPVPGTP
Trigger: GGGAGTACCTGGAACGGGAGCGCTCGTCTTTCCCCAGGTTCTACTTTGTGGGTGATGAGGATTTGCTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCTTCAGCCGGCTGTCTCCAGATAAGGACCAGAGGATaGCGTAAACCAGATAGCGCTGAATGTAGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: SSAGCLQIRTRG*RKPDSAECSAP
Trigger: TGGAGCGCTACATTCAGCGCTATCTGGTTTACGCCATCCTCTGGTCCTTATCTGGAGACAGCCGGCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCCCTGATCATCTGCTCCACCTCATTGGCTTTCTGCTaGTTGTCCTTGGCGTCATCTTCCAGCTTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLIICSTSLAFC*LSLASSSSFCS
Trigger: GCTGCAGAAGCTGGAAGATGACGCCAAGGACAACCAGCAGAAAGCCAATGAGGTGGAGCAGATGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CAA 72 bp CTCTTCATCGCGGCCTCCCAGGCTTCCGTCCCTTCTTaGGAAACATCCAGACCATCGACTTCCTTGACATTC +
Preference number: 6 (lower is better)
Translates to: LFIAASQASVPS*ETSRPSTSLTF
Trigger: GAATGTCAAGGAAGTCGATGGTCTGGATGTTTCCAAAGAAGGGACGGAAGCCTGGGAGGCCGCGATGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CAGCTCTGTCCTCCTGTACGATCTTCATTTGCAGGTTaGCCACCTGTTGCTGAATGGCAGAGTCCTTCCGCC +
Preference number: 6 (lower is better)
Translates to: QLCPPVRSSFAG*PPVAEWQSPSA
Trigger: GGCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGATCGTACAGGAGGACAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ATGGCAGAGACGCTGTTGATATGCTCCTTGACCTTGTaGAAGAGGTCATCCCAGCCTCGGATGAGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: MAETLLICSLTL*KRSSQPRMRRH
Trigger: ATGCCGCCTCATCCGAGGCTGGGATGACCTCTTCAACAAGGTCAAGGAGCATATCAACAGCGTCTCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTCATGGCAGAGACGCTGTTGATATGCTCCTTGACCTaGTTGAAGAGGTCATCCCAGCCTCGGATGAGGCGG +
Preference number: 6 (lower is better)
Translates to: FMAETLLICSLT*LKRSSQPRMRR
Trigger: CCGCCTCATCCGAGGCTGGGATGACCTCTTCAACAAGGTCAAGGAGCATATCAACAGCGTCTCTGCCATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AGTTGCTCATCACACAGTTTGAAGAACGGGACGATCTaGTTGGCAAGGACCTCAGCAGTCCGGAAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SCSSHSLKNGTI*LARTSAVRKPC
Trigger: GCAGGGCTTCCGGACTGCTGAGGTCCTTGCCAACAAGATCGTCCCGTTCTTCAAACTGTGTGATGAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GAGCCTCAGCATGGCGCGGTTAAAAGTGCCATAGATTaGCGTCAGGGAGGCTGGTCCTGGGTAATCCACATA +
Preference number: 6 (lower is better)
Translates to: EPQHGAVKSAID*RQGGWSWVIHI
Trigger: TATGTGGATTACCCAGGACCAGCCTCCCTGACGCAAATCTATGGCACTTTTAACCGCGCCATGCTGAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCACGGCGCAGTTCTTCCACCTGGTCCACGGTCTCTTaGATTTTTCGGAGCCCAACATTCAGGTGCATCTGC +
Preference number: 6 (lower is better)
Translates to: SRRSSSTWSTVS*IFRSPTFRCIC
Trigger: GCAGATGCACCTGAATGTTGGGCTCCGAAAAATCAAAGAGACCGTGGACCAGGTGGAAGAACTGCGCCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AGGACTGTGGAGATGGCATTGGAGAGTGATAGCTTGTaGTTGCTGCACGTGGCCCCTTGGAGCTTCAGACCT +
Preference number: 6 (lower is better)
Translates to: RTVEMALESDSL*LLHVAPWSFRP
Trigger: AGGTCTGAAGCTCCAAGGGGCCACGTGCAGCAACAACAAGCTATCACTCTCCAATGCCATCTCCACAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GAAATGAATTCTTTCTCCTCTTCTCCTTCATCACCAACATCCTCTTaGAGGGTGGAGCGCTCCACCAGGACCGTGTGGACCTGCGGGTCT +
Preference number: 6 (lower is better)
Translates to: EMNSFSSSPSSPTSS*RVERSTRTVWTCGS
Trigger: AGACCCGCAGGTCCACACGGTCCTGGTGGAGCGCTCCACCCTCAAAGAGGATGTTGGTGATGAAGGAGAAGAGGAGAAAGAATTCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTCAGACCTGTATCAGTGTCAAAACTGACAGTGGCATGGAAACGTTaGCCGTGCTTCAGGATGTCCAGAGTCAGGAGCACCTCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: FRPVSVSKLTVAWKR*PCFRMSRVRSTSGL
Trigger: GAGCCCCGAGGTGCTCCTGACTCTGGACATCCTGAAGCACGGCAAACGTTTCCATGCCACTGTCAGTTTTGACACTGATACAGGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GAAGACAGTTGCTCATCACACAGTTTGAAGAACGGGACGATCTTGTaGGCAAGGACCTCAGCAGTCCGGAAGCCCTGCGAGTACAGCATG +
Preference number: 6 (lower is better)
Translates to: EDSCSSHSLKNGTIL*ARTSAVRKPCEYSM
Trigger: CATGCTGTACTCGCAGGGCTTCCGGACTGCTGAGGTCCTTGCCAACAAGATCGTCCCGTTCTTCAAACTGTGTGATGAGCAACTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CGAGGGAATGAGCCTCAGCATGGCGCGGTTAAAAGTGCCATAGATTaGCGTCAGGGAGGCTGGTCCTGGGTAATCCACATATACAACAGG +
Preference number: 6 (lower is better)
Translates to: RGNEPQHGAVKSAID*RQGGWSWVIHIYNR
Trigger: CCTGTTGTATATGTGGATTACCCAGGACCAGCCTCCCTGACGCAAATCTATGGCACTTTTAACCGCGCCATGCTGAGGCTCATTCCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TGGTCTTTCACCATTTTCTTCAGCTTGTCATTGGCCGCTGCGTTCTaGACCTCCAGCTCTTGGCTCTTGATCCTCAGGTCACGGCGCAGT +
Preference number: 6 (lower is better)
Translates to: WSFTIFFSLSLAAAF*TSSSWLLILRSRRS
Trigger: ACTGCGCCGTGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAAAATGGTGAAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GAGCGCTTCTCGTCCACGTCTGGCCTTTCTGCTTTAAGCACTTCATaGAGACACTGGCTCTGTAAACTGCTGCGGGTGACGGTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: ERFSSTSGLSALSTS*RHWLCKLLRVTVKF
Trigger: GAACTTCACCGTCACCCGCAGCAGTTTACAGAGCCAGTGTCTCAATGAAGTGCTTAAAGCAGAAAGGCCAGACGTGGACGAGAAGCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TGCACAAACTCCTCTCGCCTGATACCATCAGGCATCTGGATGTCCTaGTGCCCGTCAACCTTGCACGCCAGCTTGAATTCACTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: CTNSSRLIPSGIWMS*CPSTLHASLNSLSK
Trigger: CTTCGACAGTGAATTCAAGCTGGCGTGCAAGGTTGACGGGCACAAGGACATCCAGATGCCTGATGGTATCAGGCGAGAGGAGTTTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GTCCCATCGCCTGGAAATCAAAGGTTTCGTCACAGTTaGAAACTAAGACGAACCGCCCCAGCTGATGGCCGA +
Preference number: 6 (lower is better)
Translates to: VPSPGNQRFRHS*KLRRTAPADGR
Trigger: TCGGCCATCAGCTGGGGCGGTTCGTCTTAGTTTTCAACTGTGACGAAACCTTTGATTTCCAGGCGATGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp ATAGTGTGGCTGTGTGTCCTGAGTAAACCGCTCCTGTaGCATGGTATAGAACTCCACCATGGCGGCAGTGAG +
Preference number: 6 (lower is better)
Translates to: IVWLCVLSKPLL*HGIELHHGGSE
Trigger: CTCACTGCCGCCATGGTGGAGTTCTATACCATGTCACAGGAGCGGTTTACTCAGGACACACAGCCACACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GATGTTCTGCAGCTGTTTGATCCTCTCGCTGAAATCTaGCACCCACTGGATCACAGTCATGCCTGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: DVLQLFDPLAEI*HPLDHSHACRH
Trigger: GTGCCTGCAGGCATGACTGTGATCCAGTGGGTGTCAGATTTCAGCGAGAGGATCAAACAGCTGCAGAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTAGAGCTGGTTGGCTTGGTGAGCCTTGTTCACAATTaGAAGTGGCACTCGGAAGCCAAGCCACTTGAGGTT +
Preference number: 6 (lower is better)
Translates to: VELVGLVSLVHN*KWHSEAKPLEV
Trigger: AACCTCAAGTGGCTTGGCTTCCGAGTGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CAGGCCGTTGGACGTGAAGTACGGCTGCATGATCGTTaGTGCATCTCTTTGAATCTGCAGCATTGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: QAVGREVRLHDR*CISLNLQHWRS
Trigger: GCTTCTCCAATGCTGCAGATTCAAAGAGATGCAGCAACGATCATGCAGCCGTACTTCACGTCCAACGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTGAGAGGGGCTTTCTCCCAGGGTCAGTGGGTGGATTaGAAGCCCCAACAAACTGGATTCTCTCTAGCTTTA +
Preference number: 6 (lower is better)
Translates to: VRGAFSQGQWVD*KPQQTGFSLAL
Trigger: TAAAGCTAGAGAGAATCCAGTTTGTTGGGGCTTGCAATCCACCCACTGACCCTGGGAGAAAGCCCCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TTGATTTTTCGGAGCCCAACATTCAGGTGCATCTGCTaGTCCTCCAACTCGCTGCGCTTCTCATGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LIFRSPTFRCIC*SSNSLRFSWKR
Trigger: CCTCTTCCATGAGAAGCGCAGCGAGTTGGAGGAGCAGCAGATGCACCTGAATGTTGGGCTCCGAAAAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ACGGTCTCTTTGATTTTTCGGAGCCCAACATTCAGGTaGATCTGCTGCTCCTCCAACTCGCTGCGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: TVSLIFRSPTFR*ICCSSNSLRFS
Trigger: TGAGAAGCGCAGCGAGTTGGAGGAGCAGCAGATGCACCTGAATGTTGGGCTCCGAAAAATCAAAGAGACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GTAAGTCCGGACGCTTTCAATCAGCGAGATGGCAAATaGGTAGAGCTGGTTGGCTTGGTGAGCCTTGTTCAC +
Preference number: 6 (lower is better)
Translates to: VSPDAFNQRDGK*VELVGLVSLVH
Trigger: GTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAAGCGTCCGGACTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CACTCGGGGTCCACATCGCCATCAAAGACAATCCACTaGCGTTTCTGCAGCTCACCTCTCACATTGTCTATG +
Preference number: 6 (lower is better)
Translates to: HSGSTSPSKTIH*RFCSSPLTLSM
Trigger: CATAGACAATGTGAGAGGTGAGCTGCAGAAACGCCAGTGGATTGTCTTTGATGGCGATGTGGACCCCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CCTGACTTCACGGCGGTGTTGATGGCCTTATCTGCTTaGTTAAAGCCTTCTGCTGAGCCGATGGCAATAGAC +
Preference number: 6 (lower is better)
Translates to: PDFTAVLMALSA*LKPSAEPMAID
Trigger: GTCTATTGCCATCGGCTCAGCAGAAGGCTTTAACCAAGCAGATAAGGCCATCAACACCGCCGTGAAGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TGCATCTTCAGCATCTTGCTGATCATGTCCACGCCTTaGGTGGTAAGCAGGACCCTTTCAGCATTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: CIFSILLIMSTP*VVSRTLSALLG
Trigger: CCCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGTGGACATGATCAGCAAGATGCTGAAGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTCCTGTACGATCTTCATTTGCAGGTTTGCCACCTGTaGCTGAATGGCAGAGTCCTTCCGCCGCATGATGTC +
Preference number: 6 (lower is better)
Translates to: LLYDLHLQVCHL*LNGRVLPPHDV
Trigger: GACATCATGCGGCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGATCGTACAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TGTGAGAGGGGCTTTCTCCCAGGGTCAGTGGGTGGATaGCAAGCCCCAACAAACTGGATTCTCTCTAGCTTT +
Preference number: 6 (lower is better)
Translates to: CERGFLPGSVGG*QAPTNWILSSF
Trigger: AAAGCTAGAGAGAATCCAGTTTGTTGGGGCTTGCAATCCACCCACTGACCCTGGGAGAAAGCCCCTCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCGATGACAGCAGGCTCCACTTTATCCAGGTCCTCCTaGACACTCATCTGCTTGTCTGCGATCACTTCCTGC +
Preference number: 6 (lower is better)
Translates to: SMTAGSTLSRSS*TLICLSAITSC
Trigger: GCAGGAAGTGATCGCAGACAAGCAGATGAGTGTCAAGGAGGACCTGGATAAAGTGGAGCCTGCTGTCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTGATCATCTGCTCCACCTCATTGGCTTTCTGCTGGTaGTCCTTGGCGTCATCTTCCAGCTTCTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: LIICSTSLAFCW*SLASSSSFCSS
Trigger: TGAGCTGCAGAAGCTGGAAGATGACGCCAAGGACAACCAGCAGAAAGCCAATGAGGTGGAGCAGATGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CAA 72 bp CTGCATCTTCAGCATCTTGCTGATCATGTCCACGCCTaGGGTGGTAAGCAGGACCCTTTCAGCATTGTTGGG +
Preference number: 6 (lower is better)
Translates to: LHLQHLADHVHA*GGKQDPFSIVG
Trigger: CCCAACAATGCTGAAAGGGTCCTGCTTACCACCCAAGGCGTGGACATGATCAGCAAGATGCTGAAGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GACGCTTTCAATCAGCGAGATGGCAAATGGGTAGAGCTGGTTGGCTaGGTGAGCCTTGTTCACAATTGCAAGTGGCACTCGGAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: DAFNQRDGKWVELVG*VSLVHNCKWHSEAK
Trigger: CTTGGCTTCCGAGTGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAAGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AGCTCTGTCCTCCTGTACGATCTTCATTTGCAGGTTTGCCACCTGTaGCTGAATGGCAGAGTCCTTCCGCCGCATGATGTCATTGAAGGC +
Preference number: 6 (lower is better)
Translates to: SSVLLYDLHLQVCHL*LNGRVLPPHDVIEG
Trigger: GCCTTCAATGACATCATGCGGCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGATCGTACAGGAGGACAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GGAGAGAGTTTCATGGCAGAGACGCTGTTGATATGCTCCTTGACCTaGTTGAAGAGGTCATCCCAGCCTCGGATGAGGCGGCATTTGTTC +
Preference number: 6 (lower is better)
Translates to: GESFMAETLLICSLT*LKRSSQPRMRRHLF
Trigger: GAACAAATGCCGCCTCATCCGAGGCTGGGATGACCTCTTCAACAAGGTCAAGGAGCATATCAACAGCGTCTCTGCCATGAAACTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GGCGTTGTCGATCTTGCTTTTGATCAAGGACCTGGTAACGTCTCTTaGGTGAACCAGCTCTGTGATCAAGTGCTCCAGCTTCCGTCTCCG +
Preference number: 6 (lower is better)
Translates to: GVVDLAFDQGPGNVS*VNQLCDQVLQLPSP
Trigger: CGGAGACGGAAGCTGGAGCACTTGATCACAGAGCTGGTTCACCAAAGAGACGTTACCAGGTCCTTGATCAAAAGCAAGATCGACAACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AAGAACCTGTGTGAGAGGGGCTTTCTCCCAGGGTCAGTGGGTGGATaGCAAGCCCCAACAAACTGGATTCTCTCTAGCTTTACCCACGTT +
Preference number: 6 (lower is better)
Translates to: KNLCERGFLPGSVGG*QAPTNWILSSFTHV
Trigger: AACGTGGGTAAAGCTAGAGAGAATCCAGTTTGTTGGGGCTTGCAATCCACCCACTGACCCTGGGAGAAAGCCCCTCTCACACAGGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTCTGGGCCTCGATGACAGCAGGCTCCACTTTATCCAGGTCCTCCTaGACACTCATCTGCTTGTCTGCGATCACTTCCTGCTGTTTGTGT +
Preference number: 6 (lower is better)
Translates to: FWASMTAGSTLSRSS*TLICLSAITSCCLC
Trigger: ACACAAACAGCAGGAAGTGATCGCAGACAAGCAGATGAGTGTCAAGGAGGACCTGGATAAAGTGGAGCCTGCTGTCATCGAGGCCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTGTGGAGCATCTGTATCCATGTCGACTTCTGCTTTATCCTCAGCTaGTCCAAGAAGAACCTGGGTCCAAGCTCGAAGGCCAGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: LWSICIHVDFCFILS*SKKNLGPSSKASLQ
Trigger: CTGCAAGCTGGCCTTCGAGCTTGGACCCAGGTTCTTCTTGGACAAGCTGAGGATAAAGCAGAAGTCGACATGGATACAGATGCTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTGGCACCACCAGATGCAGCTGCTTGTGAGATGTTCTGCAGCTGTTaGATCCTCTCGCTGAAATCTGACACCCACTGGATCACAGTCATG +
Preference number: 6 (lower is better)
Translates to: LAPPDAAACEMFCSC*ILSLKSDTHWITVM
Trigger: CATGACTGTGATCCAGTGGGTGTCAGATTTCAGCGAGAGGATCAAACAGCTGCAGAACATCTCACAAGCAGCTGCATCTGGTGGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AACGCACGTTCCAAGTTTAGCCAAAAGCTGATTTCCTaGAAGGCAGTTCCTGATGCTGGATCCCGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: NARSKFSQKLIS*KAVPDAGSRSS
Trigger: GCTTGACCGGGATCCAGCATCAGGAACTGCCTTGCAGGAAATCAGCTTTTGGCTAAACTTGGAACGTGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ACGAATGGCCCCTCGGATGTGTGGGCGGACGAACAGTaGATTGAACCTGGAGAAAATCCTGAACATCTCATT +
Preference number: 6 (lower is better)
Translates to: TNGPSDVWADEQ*IEPGENPEHLI
Trigger: AATGAGATGTTCAGGATTTTCTCCAGGTTCAATGCACTGTTCGTCCGCCCACACATCCGAGGGGCCATTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CCCAGCATCTGCCCAAACTTGCTGAGAACCTCCTTATaGCAGGAGTCATACTTCAAGTTCACCTTGGACTGG +
Preference number: 6 (lower is better)
Translates to: PSICPNLLRTSL*QESYFKFTLDW
Trigger: CCAGTCCAAGGTGAACTTGAAGTATGACTCCTGGCATAAGGAGGTTCTCAGCAAGTTTGGGCAGATGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TGGGAGTGGAATTCTGTCATGTTTGAGCCCAGCATCTaGCCAAACTTGCTGAGAACCTCCTTATGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: WEWNSVMFEPSI*PNLLRTSLCQE
Trigger: CTCCTGGCATAAGGAGGTTCTCAGCAAGTTTGGGCAGATGCTGGGCTCAAACATGACAGAATTCCACTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CTGCTTCAAAAATTCTTCCAAGGCCATCTCGCCTTGTaGCACCAGCAGCACATCCTTGACGACAGCTTCGTT +
Preference number: 6 (lower is better)
Translates to: LLQKFFQGHLAL*HQQHILDDSFV
Trigger: AACGAAGCTGTCGTCAAGGATGTGCTGCTGGTGGCACAAGGCGAGATGGCCTTGGAAGAATTTTTGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GAGACCTTCAACAGGCAATGTCTCCAGGGGTCTCAGTaGTTCAAAGATTCCTCTTACCCACCGAGTCATCTC +
Preference number: 6 (lower is better)
Translates to: ETFNRQCLQGSQ*FKDSSYPPSHL
Trigger: GAGATGACTCGGTGGGTAAGAGGAATCTTTGAAGCACTGAGACCCCTGGAGACATTGCCTGTTGAAGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GGCTCCACTTTATCCAGGTCCTCCTTGACACTCATCTaGTTGTCTGCGATCACTTCCTGCTGTTTGTGTAGC +
Preference number: 6 (lower is better)
Translates to: GSTLSRSSLTLI*LSAITSCCLCS
Trigger: GCTACACAAACAGCAGGAAGTGATCGCAGACAAGCAGATGAGTGTCAAGGAGGACCTGGATAAAGTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CAGCATTGGAGAGGTACTCCGTCCTTGCAATGTCTGTaGGGAACTGGATGTTGGCTTGCTGTAAGTGATGAG +
Preference number: 6 (lower is better)
Translates to: QHWRGTPSLQCL*GTGCWLAVSDE
Trigger: CTCATCACTTACAGCAAGCCAACATCCAGTTCCGCACAGACATTGCAAGGACGGAGTACCTCTCCAATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CTCATCTGCCTGCACCTTGGCAATCAGATCTTTAAATaGAGGCAGACAGCTCAACCTCACGACAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: LICLHLGNQIFK*RQTAQPHDSFC
Trigger: GCAGAAGCTGTCGTGAGGTTGAGCTGTCTGCCTGCATTTAAAGATCTGATTGCCAAGGTGCAGGCAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TTGGCACCACCAGATGCAGCTGCTTGTGAGATGTTCTaGAGCTGTTTGATCCTCTCGCTGAAATCTGACACC +
Preference number: 6 (lower is better)
Translates to: LAPPDAAACEMF*SCLILSLKSDT
Trigger: GGTGTCAGATTTCAGCGAGAGGATCAAACAGCTGCAGAACATCTCACAAGCAGCTGCATCTGGTGGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TTGCAACAAGGGCCTGCCTTATCTTGTCCAGCTCCGTaGCAGACAGCAAGTCATTCAGAGGGAAGTCTTTCA +
Preference number: 6 (lower is better)
Translates to: LQQGPALSCPAP*QTASHSEGSLS
Trigger: TGAAAGACTTCCCTCTGAATGACTTGCTGTCTGCCACGGAGCTGGACAAGATAAGGCAGGCCCTTGTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TTTTCCTCAATAATCAGTAGGTCGTCCACCTTCTCCTaGAAGTTGAAAACCGTCTCTGCCAGGCGCTGCACG +
Preference number: 6 (lower is better)
Translates to: FSSIISRSSTFS*KLKTVSARRCT
Trigger: CGTGCAGCGCCTGGCAGAGACGGTTTTCAACTTCCAGGAGAAGGTGGACGACCTACTGATTATTGAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CCTCCTTATGCCAGGAGTCATACTTCAAGTTCACCTTaGACTGGACCTTGCCGTAATCTATCACCACCGGAC +
Preference number: 6 (lower is better)
Translates to: PPYARSHTSSSP*TGPCRNLSPPD
Trigger: GTCCGGTGGTGATAGATTACGGCAAGGTCCAGTCCAAGGTGAACTTGAAGTATGACTCCTGGCATAAGGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TTGTGTTCAGCCAGCCAAGTGTACAGGAGAGCTTCATaGCGGACTGTATCTAAGGTTGGCACGACGACATCT +
Preference number: 6 (lower is better)
Translates to: LCSASQVYRRAS*RTVSKVGTTTS
Trigger: AGATGTCGTCGTGCCAACCTTAGATACAGTCCGCCATGAAGCTCTCCTGTACACTTGGCTGGCTGAACACAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AAAAGTGCCATAGATTTGCGTCAGGGAGGCTGGTCCTaGGTAATCCACATATACAACAGGCACGTGGCGCAA +
Preference number: 6 (lower is better)
Translates to: KSAIDLRQGGWS*VIHIYNRHVAQ
Trigger: TTGCGCCACGTGCCTGTTGTATATGTGGATTACCCAGGACCAGCCTCCCTGACGCAAATCTATGGCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CCTCCCTCCTGTTCGCCGAACTTCACGGTTCAGTACTaGATTCAAAACTGGATCGTAGCTTTCCACATCCTG +
Preference number: 6 (lower is better)
Translates to: PPSCSPNFTVQY*IQNWIVAFHIL
Trigger: CAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGAACAGGAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GTATCAGTGTCAAAACTGACAGTGGCATGGAAACGTTaGCCGTGCTTCAGGATGTCCAGAGTCAGGAGCACC +
Preference number: 6 (lower is better)
Translates to: VSVSKLTVAWKR*PCFRMSRVRST
Trigger: GGTGCTCCTGACTCTGGACATCCTGAAGCACGGCAAACGTTTCCATGCCACTGTCAGTTTTGACACTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AATCAGCGAGATGGCAAATGGGTAGAGCTGGTTGGCTaGGTGAGCCTTGTTCACAATTGCAAGTGGCACTCG +
Preference number: 6 (lower is better)
Translates to: NQRDGKWVELVG*VSLVHNCKWHS
Trigger: CGAGTGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GAGAGTTTCATGGCAGAGACGCTGTTGATATGCTCCTaGACCTTGTTGAAGAGGTCATCCCAGCCTCGGATG +
Preference number: 6 (lower is better)
Translates to: ESFMAETLLICS*TLLKRSSQPRM
Trigger: CATCCGAGGCTGGGATGACCTCTTCAACAAGGTCAAGGAGCATATCAACAGCGTCTCTGCCATGAAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GCAACGGTCAGTGAGGGGCGTCTGAACCAGCTTGTCTaGAACACCCAGGTACTCAAAGCCGTAGTTAAACTT +
Preference number: 6 (lower is better)
Translates to: ATVSEGRLNQLV*NTQVLKAVVKL
Trigger: AAGTTTAACTACGGCTTTGAGTACCTGGGTGTTCAAGACAAGCTGGTTCAGACGCCCCTCACTGACCGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACCATTTTCTTCAGCTTGTCATTGGCCGCTGCGTTCTaGACCTCCAGCTCTTGGCTCTTGATCCTCAGGTCA +
Preference number: 6 (lower is better)
Translates to: TIFFSLSLAAAF*TSSSWLLILRS
Trigger: TGACCTGAGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCAGCCTCTTGCTGGTCTTTCACCATTTTCTTCAGCTaGTCATTGGCCGCTGCGTTCTTGACCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SASCWSFTIFFS*SLAAAFLTSSS
Trigger: AGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAAAATGGTGAAAGACCAGCAAGAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GTGATGAGACCAGGTGGTGAACAAGTTCTGGCGCATTaGCTGGTCAAAGTAGCCAGCGTAAGCAATGAAGGC +
Preference number: 6 (lower is better)
Translates to: VMRPGGEQVLAH*LVKVASVSNEG
Trigger: GCCTTCATTGCTTACGCTGGCTACTTTGACCAGCAAATGCGCCAGAACTTGTTCACCACCTGGTCTCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTGATCGAAGGTCAGATTCTCCAAATTCGTACTTCTTaGACCACCCCAGTGGAGCATAGCGCAGGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: LIEGQILQIRTS*TTPVEHSAGAL
Trigger: AAGAGCGCCTGCGCTATGCTCCACTGGGGTGGTCAAAGAAGTACGAATTTGGAGAATCTGACCTTCGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CCAGATGCAGCTGCTTGTGAGATGTTCTGCAGCTGTTaGATCCTCTCGCTGAAATCTGACACCCACTGGATC +
Preference number: 6 (lower is better)
Translates to: PDAAACEMFCSC*ILSLKSDTHWI
Trigger: GATCCAGTGGGTGTCAGATTTCAGCGAGAGGATCAAACAGCTGCAGAACATCTCACAAGCAGCTGCATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GCAAGTGGCACTCGGAAGCCAAGCCACTTGAGGTTCCGGACTTCTTaGGAGAGTGTTATGATCTCTGGAAGGAAGTTCACCTTTAGCTTG +
Preference number: 6 (lower is better)
Translates to: ASGTRKPSHLRFRTS*ESVMISGRKFTFSL
Trigger: CAAGCTAAAGGTGAACTTCCTTCCAGAGATCATAACACTCTCCAAAGAAGTCCGGAACCTCAAGTGGCTTGGCTTCCGAGTGCCACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCGTCCACTGCTTTCTGCACTCTGTTCAAGATCTCTGAGAATGTCTaGTGGTCATACATGCAGGTTTCCAAGGAGCGGACCTCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: SSTAFCTLFKISENV*WSYMQVSKERTSRS
Trigger: AGACCTGGAGGTCCGCTCCTTGGAAACCTGCATGTATGACCACAAGACATTCTCAGAGATCTTGAACAGAGTGCAGAAAGCAGTGGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TGTCAAATAGCAACGGTCAGTGAGGGGCGTCTGAACCAGCTTGTCTaGAACACCCAGGTACTCAAAGCCGTAGTTAAACTTGGCATTGGC +
Preference number: 6 (lower is better)
Translates to: CQIATVSEGRLNQLV*NTQVLKAVVKLGIG
Trigger: GCCAATGCCAAGTTTAACTACGGCTTTGAGTACCTGGGTGTTCAAGACAAGCTGGTTCAGACGCCCCTCACTGACCGTTGCTATTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GTTCGGCTTCTCCAGGTCCATCTTACTGGTGAATTCTTTGCCGACTaGATACAGTGCTTCAGTGGACCAGTCACCAAACCAGTTCAGCAC +
Preference number: 6 (lower is better)
Translates to: VRLLQVHLTGEFFAD*IQCFSGPVTKPVQH
Trigger: GTGCTGAACTGGTTTGGTGACTGGTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTCACCAGTAAGATGGACCTGGAGAAGCCGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTCTTCTTCTCAGCCTCTTGCTGGTCTTTCACCATTTTCTTCAGCTaGTCATTGGCCGCTGCGTTCTTGACCTCCAGCTCTTGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: FFFSASCWSFTIFFS*SLAAAFLTSSSWLL
Trigger: CAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAAAATGGTGAAAGACCAGCAAGAGGCTGAGAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTCATCTTCTCTCGTATGGCATCACTGATCTCCTCAGCCGAGAAGTaGACGATGGTGGGGATGAAGTTCTCTCTCATGATGATGGAGCGG +
Preference number: 6 (lower is better)
Translates to: FIFSRMASLISSAEK*TMVGMKFSLMMMER
Trigger: CCGCTCCATCATCATGAGAGAGAACTTCATCCCCACCATCGTCAACTTCTCGGCTGAGGAGATCAGTGATGCCATACGAGAGAAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CAA 90 bp GAACTGCTATCCAGCCAAATGCCAAACTGCTCATCTGCCTGCACCTaGGCAATCAGATCTTTAAATGCAGGCAGACAGCTCAACCTCACG +
Preference number: 6 (lower is better)
Translates to: ELLSSQMPNCSSACT*AIRSLNAGRQLNLT
Trigger: CGTGAGGTTGAGCTGTCTGCCTGCATTTAAAGATCTGATTGCCAAGGTGCAGGCAGATGAGCAGTTTGGCATTTGGCTGGATAGCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTGCATATCCTAGAGACAGGGATGCTGCTAAATGTCCTCAGCATGTaGGCTTTCACTCCGGGTGGTGGCTCAAACACAAAGATCCGACCA +
Preference number: 6 (lower is better)
Translates to: LHILETGMLLNVLSM*AFTPGGGSNTKIRP
Trigger: TGGTCGGATCTTTGTGTTTGAGCCACCACCCGGAGTGAAAGCCAACATGCTGAGGACATTTAGCAGCATCCCTGTCTCTAGGATATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TGTACGATCTTCATTTGCAGGTTTGCCACCTGTTGCTaGATGGCAGAGTCCTTCCGCCGCATGATGTCATTG +
Preference number: 6 (lower is better)
Translates to: CTIFICRFATCC*MAESFRRMMSL
Trigger: CAATGACATCATGCGGCGGAAGGACTCTGCCATTCAGCAACAGGTGGCAAACCTGCAAATGAAGATCGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CCAAAGCTTGTGTCATTGTCAAATAGCAACGGTCAGTaGGGGGCGTCTGAACCAGCTTGTCTTGAACACCCA +
Preference number: 6 (lower is better)
Translates to: PKLVSLSNSNGQ*GASEPACLEHP
Trigger: TGGGTGTTCAAGACAAGCTGGTTCAGACGCCCCTCACTGACCGTTGCTATTTGACAATGACACAAGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CCAGCTCCACTAACACCAATCAGAAGCAGATGGCCTTaGGGTTGTCGGAATATTCTGTCGATCCTCAGCACA +
Preference number: 6 (lower is better)
Translates to: PAPLTPIRSRWP*GCRNILSILST
Trigger: TGTGCTGAGGATCGACAGAATATTCCGACAACCTCAAGGCCATCTGCTTCTGATTGGTGTTAGTGGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GGATGTTGGCTTGCTGTAAGTGATGAGACCAGGTGGTaGACAAGTTCTGGCGCATTTGCTGGTCAAAGTAGC +
Preference number: 6 (lower is better)
Translates to: GCWLAVSDETRW*TSSGAFAGQSS
Trigger: GCTACTTTGACCAGCAAATGCGCCAGAACTTGTTCACCACCTGGTCTCATCACTTACAGCAAGCCAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TGTGTCGTCCAGCCACGTGTCCACCGTGTCACAAGCTaGTCGAAGGTCAGATTCTCCAAATTCGTACTTCTT +
Preference number: 6 (lower is better)
Translates to: CVVQPRVHRVTS*SKVRFSKFVLL
Trigger: AAGAAGTACGAATTTGGAGAATCTGACCTTCGATCAGCTTGTGACACGGTGGACACGTGGCTGGACGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GCTTGGCTTTGCGGGTACTGGACCTTGAACTTGTCGTaGAGAGATTCGATGTCATCTTTCACACGTTGGATC +
Preference number: 6 (lower is better)
Translates to: AWLCGYWTLNLS*RDSMSSFTRWI
Trigger: GATCCAACGTGTGAAAGATGACATCGAATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CACAAGCCTGTCTTGGAAGAGACGGAGGGCTTCATGTaGCCAAATACGAATGAGACCTTCAACAGGCAATGT +
Preference number: 6 (lower is better)
Translates to: HKPVLEETEGFM*PNTNETFNRQC
Trigger: ACATTGCCTGTTGAAGGTCTCATTCGTATTTGGGCACATGAAGCCCTCCGTCTCTTCCAAGACAGGCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GTCTTTCACCATTTTCTTCAGCTTGTCATTGGCCGCTaGGTTCTTGACCTCCAGCTCTTGGCTCTTGATCCT +
Preference number: 6 (lower is better)
Translates to: VFHHFLQLVIGR*VLDLQLLALDP
Trigger: AGGATCAAGAGCCAAGAGCTGGAGGTCAAGAACGCAGCGGCCAATGACAAGCTGAAGAAAATGGTGAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ACCTCATTCAGAGCTTGGAGCAGAGACTTTTCAAGCTaGCGTAAACGGAGTTGGAACTCCCCTTGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: TSFRAWSRDFSS*RKRSWNSPCSF
Trigger: GAAACTGCAAGGGGAGTTCCAACTCCGTTTACGGCAGCTTGAAAAGTCTCTGCTCCAAGCTCTGAATGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GCACTGCTTCGCAACGTTCGTGATGATGGGATGAATTaGCAAGCTGATCTCTGGGATCTCAATGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: ALLRNVRDDGMN*QADLWDLNVLL
Trigger: CAGCAGAACATTGAGATCCCAGAGATCAGCTTGCCAATTCATCCCATCATCACGAACGTTGCGAAGCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGAGATTCGATGTCATCTTTCACACGTTGGATCAGCTaGGTCTGGTATTCACGAATGGCCCCTCGGATGTGT +
Preference number: 6 (lower is better)
Translates to: RDSMSSFTRWIS*VWYSRMAPRMC
Trigger: ACACATCCGAGGGGCCATTCGTGAATACCAGACCCAGCTGATCCAACGTGTGAAAGATGACATCGAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GATCTTGGGCTCTCCACCAGGCTTGTGACTGACTTGTaGAGCATCTGTATCCATGTCGACTTCTGCTTTATC +
Preference number: 6 (lower is better)
Translates to: DLGLSTRLVTDL*SICIHVDFCFI
Trigger: GATAAAGCAGAAGTCGACATGGATACAGATGCTCCACAAGTCAGTCACAAGCCTGGTGGAGAGCCCAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp GTGTGTTGGGGGCTGCGGCAGTTTATCATACACAACTaGCATGTAGTCAGGCACTATATAGTTCGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: VCWGLRQFIIHN*HVVRHYIVRLL
Trigger: GAGAAGCCGAACTATATAGTGCCTGACTACATGCCAGTTGTGTATGATAAACTGCCGCAGCCCCCAACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCGCCGAACTTCACGGTTCAGTACTGGATTCAAAACTaGATCGTAGCTTTCCACATCCTGGACAAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SPNFTVQYWIQN*IVAFHILDKKG
Trigger: CCCCTTCTTGTCCAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp AGAAAGATGACAAAGGATGGTGACAGGTCTATGTCTTaGTCACCGAGGGTAATCAGCACCCTCCCTCCTGTT +
Preference number: 6 (lower is better)
Translates to: RKMTKDGDRSMS*SPRVISTLPPV
Trigger: AACAGGAGGGAGGGTGCTGATTACCCTCGGTGACCAAGACATAGACCTGTCACCATCCTTTGTCATCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CCA 72 bp CCTCCCTCCTGTTCGCCGAACTTCACGGTTCAGTACTaGATTCAAAACTGGATCGTAGCTTTCCACATCCTT +
Preference number: 6 (lower is better)
Translates to: PPSCSPNFTVQY*IQNWIVAFHIL
Trigger: AAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGAACAGGAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167395.2
CDS CAA 72 bp CAGGTCACGGACATGACTCATTTTACAAGCTTGGCTTaGCGGGTACTGGACCTTGAACTTGTCGTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: QVTDMTHFTSLA*RVLDLELVVQR
Trigger: TCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAAAATGAGTCATGTCCGTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACTCGGAAGCCAAGCCACTTGAGGTTCCGGACTTCTTaGGAGAGTGTTATGATCTCTGGAAGGAAGTTCACC +
Preference number: 6 (lower is better)
Translates to: TRKPSHLRFRTS*ESVMISGRKFT
Trigger: GGTGAACTTCCTTCCAGAGATCATAACACTCTCCAAAGAAGTCCGGAACCTCAAGTGGCTTGGCTTCCGAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GTCAATGTAAAGCCAAGAAGGCGGGAACTGGAACCTTaGTTTTTCCAGCAGACGCTGACCATTGCGGTAGAG +
Preference number: 6 (lower is better)
Translates to: VNVKPRRRELEP*FFQQTLTIAVE
Trigger: CTCTACCGCAATGGTCAGCGTCTGCTGGAAAAACAAAGGTTCCAGTTCCCGCCTTCTTGGCTTTACATTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACACTCATCTGCTTGTCTGCGATCACTTCCTGCTGTTaGTGTAGCTGCTCCTGGATTTCTTGGCTCATGACC +
Preference number: 6 (lower is better)
Translates to: TLICLSAITSCC*CSCSWISWLMT
Trigger: GGTCATGAGCCAAGAAATCCAGGAGCAGCTACACAAACAGCAGGAAGTGATCGCAGACAAGCAGATGAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCCACTTTATCCAGGTCCTCCTTGACACTCATCTGCTaGTCTGCGATCACTTCCTGCTGTTTGTGTAGCTGC +
Preference number: 6 (lower is better)
Translates to: STLSRSSLTLIC*SAITSCCLCSC
Trigger: GCAGCTACACAAACAGCAGGAAGTGATCGCAGACAAGCAGATGAGTGTCAAGGAGGACCTGGATAAAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TCTCGTATGGCATCACTGATCTCCTCAGCCGAGAAGTaGACGATGGTGGGGATGAAGTTCTCTCTCATGATG +
Preference number: 6 (lower is better)
Translates to: SRMASLISSAEK*TMVGMKFSLMM
Trigger: CATCATGAGAGAGAACTTCATCCCCACCATCGTCAACTTCTCGGCTGAGGAGATCAGTGATGCCATACGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018851.14
ENSMUST00000167395.2
CDS CAA 72 bp TCCAGCCAAATGCCAAACTGCTCATCTGCCTGCACCTaGGCAATCAGATCTTTAAATGCAGGCAGACAGCTC +
Preference number: 6 (lower is better)
Translates to: SSQMPNCSSACT*AIRSLNAGRQL
Trigger: GAGCTGTCTGCCTGCATTTAAAGATCTGATTGCCAAGGTGCAGGCAGATGAGCAGTTTGGCATTTGGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp AACCACGTTTTTGATCTTGGGCTCTCCACCAGGCTTGTGACTGACTaGTGGAGCATCTGTATCCATGTCGACTTCTGCTTTATCCTCAGC +
Preference number: 6 (lower is better)
Translates to: NHVFDLGLSTRLVTD*WSICIHVDFCFILS
Trigger: GCTGAGGATAAAGCAGAAGTCGACATGGATACAGATGCTCCACAAGTCAGTCACAAGCCTGGTGGAGAGCCCAAGATCAAAAACGTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TGGGAGTGGAATTCTGTCATGTTTGAGCCCAGCATCTGCCCAAACTaGCTGAGAACCTCCTTATGCCAGGAGTCATACTTCAAGTTCACC +
Preference number: 6 (lower is better)
Translates to: WEWNSVMFEPSICPN*LRTSLCQESYFKFT
Trigger: GGTGAACTTGAAGTATGACTCCTGGCATAAGGAGGTTCTCAGCAAGTTTGGGCAGATGCTGGGCTCAAACATGACAGAATTCCACTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TCCTCCTTGACACTCATCTGCTTGTCTGCGATCACTTCCTGCTGTTaGTGTAGCTGCTCCTGGATTTCTTGGCTCATGACCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SSLTLICLSAITSCC*CSCSWISWLMTFFF
Trigger: GAAGAAGAAGGTCATGAGCCAAGAAATCCAGGAGCAGCTACACAAACAGCAGGAAGTGATCGCAGACAAGCAGATGAGTGTCAAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CGTCCCACGTCTGGAAGACTTCGAAGCAAGCCACCATaGCCTTTTCAAACTCTTCATAGGCTACATGCATCA +
Preference number: 6 (lower is better)
Translates to: RPTSGRLRSKPP*PFQTLHRLHAS
Trigger: TGATGCATGTAGCCTATGAAGAGTTTGAAAAGGTCATGGTGGCTTGCTTCGAAGTCTTCCAGACGTGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TGTACCTGCACTCCTCAATGGGTGGGTTCAGATAGATaGCCTGATTTGTTATCCTCAGCTCGTGAACCACGT +
Preference number: 6 (lower is better)
Translates to: CTCTPQWVGSDR*PDLLSSAREPR
Trigger: ACGTGGTTCACGAGCTGAGGATAACAAATCAGGTCATCTATCTGAACCCACCCATTGAGGAGTGCAGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TTGCTTTTGATCAAGGACCTGGTAACGTCTCTTTGGTaGACCAGCTCTGTGATCAAGTGCTCCAGCTTCCGT +
Preference number: 6 (lower is better)
Translates to: LLLIKDLVTSLW*TSSVIKCSSFR
Trigger: ACGGAAGCTGGAGCACTTGATCACAGAGCTGGTTCACCAAAGAGACGTTACCAGGTCCTTGATCAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp ACTTCTTCTCCGTCGCCATATGTCAAGTACATCTCCTaGCACACTTTCTTCAGCTCTTCTCGAAGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: TSSPSPYVKYIS*HTFFSSSRRAV
Trigger: GACAGCCCTTCGAGAAGAGCTGAAGAAAGTGTGTCAGGAGATGTACTTGACATATGGCGACGGAGAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp ATTTCATCACAGAACAAGACCAGCCACTTTCCAAGCTaGACAGGAGCCAAGACAACACCGTTAGGTGTACGC +
Preference number: 6 (lower is better)
Translates to: ISSQNKTSHFPS*TGAKTTPLGVR
Trigger: GCGTACACCTAACGGTGTTGTCTTGGCTCCTGTTCAGCTTGGAAAGTGGCTGGTCTTGTTCTGTGATGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TCCAGGTCCATCTTACTGGTGAATTCTTTGCCGACTTaGTACAGTGCTTCAGTGGACCAGTCACCAAACCAG +
Preference number: 6 (lower is better)
Translates to: SRSILLVNSLPT*YSASVDQSPNQ
Trigger: CTGGTTTGGTGACTGGTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTCACCAGTAAGATGGACCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ATCTTTCTCAGATGTGTGAAAATTGCAACAAGGGCCTaGCTTATCTTGTCCAGCTCCGTGGCAGACAGCAAG +
Preference number: 6 (lower is better)
Translates to: IFLRCVKIATRA*LILSSSVADSK
Trigger: CTTGCTGTCTGCCACGGAGCTGGACAAGATAAGGCAGGCCCTTGTTGCAATTTTCACACATCTGAGAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TGCTTGTCTGCGATCACTTCCTGCTGTTTGTGTAGCTaGTCCTGGATTTCTTGGCTCATGACCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: CLSAITSCCLCS*SWISWLMTFFF
Trigger: GAAGAAGAAGGTCATGAGCCAAGAAATCCAGGAGCAGCTACACAAACAGCAGGAAGTGATCGCAGACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp GATCGTAGCTTTCCACATCCTGGACAAGAAGGGGATTaGCAAATCTCAGAGCACTCTCCAAATTCTTCCGGA +
Preference number: 6 (lower is better)
Translates to: DRSFPHPGQEGD*QISEHSPNSSG
Trigger: TCCGGAAGAATTTGGAGAGTGCTCTGAGATTTGGCAATCCCCTTCTTGTCCAGGATGTGGAAAGCTACGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CTGCTATCCAGCCAAATGCCAAACTGCTCATCTGCCTaGACCTTGGCAATCAGATCTTTAAATGCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: LLSSQMPNCSSA*TLAIRSLNAGR
Trigger: TCTGCCTGCATTTAAAGATCTGATTGCCAAGGTGCAGGCAGATGAGCAGTTTGGCATTTGGCTGGATAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TGCTCTGGTGAACTGCTATCCAGCCAAATGCCAAACTaGTCATCTGCCTGCACCTTGGCAATCAGATCTTTA +
Preference number: 6 (lower is better)
Translates to: CSGELLSSQMPN*SSACTLAIRSL
Trigger: TAAAGATCTGATTGCCAAGGTGCAGGCAGATGAGCAGTTTGGCATTTGGCTGGATAGCAGTTCACCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TTTCAATCAGCGAGATGGCAAATGGGTAGAGCTGGTTaGCTTGGTGAGCCTTGTTCACAATTGCAAGTGGCA +
Preference number: 6 (lower is better)
Translates to: FQSARWQMGRAG*LGEPCSQLQVA
Trigger: TGCCACTTGCAATTGTGAACAAGGCTCACCAAGCCAACCAGCTCTACCCATTTGCCATCTCGCTGATTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp CTCCTGGTACAGCTTGTACCTGCACTCCTCAATGGGTaGGTTCAGATAGATGACCTGATTTGTTATCCTCAG +
Preference number: 6 (lower is better)
Translates to: LLVQLVPALLNG*VQIDDLICYPQ
Trigger: CTGAGGATAACAAATCAGGTCATCTATCTGAACCCACCCATTGAGGAGTGCAGGTACAAGCTGTACCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp ACTCTTTCTTGGTTTCCGCATTGTCAAAGGTTCCTCTaGCTTTCCTTATCTGGACCAGGAGAGCTTGCCACT +
Preference number: 6 (lower is better)
Translates to: TLSWFPHCQRFL*LSLSGPGELAT
Trigger: AGTGGCAAGCTCTCCTGGTCCAGATAAGGAAAGCCAGAGGAACCTTTGACAATGCGGAAACCAAGAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCATCCAGAATGCGGCCTTTTACCTCATTCAGAGCTTaGAGCAGAGACTTTTCAAGCTGCCGTAAACGGAGT +
Preference number: 6 (lower is better)
Translates to: SSRMRPFTSFRA*SRDFSSCRKRS
Trigger: ACTCCGTTTACGGCAGCTTGAAAAGTCTCTGCTCCAAGCTCTGAATGAGGTAAAAGGCCGCATTCTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp TCGCCGAACTTCACGGTTCAGTACTGGATTCAAAACTaGATCGTAGCTTTCCACATCCTTTGCTTCCACAGC +
Preference number: 6 (lower is better)
Translates to: SPNFTVQYWIQN*IVAFHILCFHS
Trigger: GCTGTGGAAGCAAAGGATGTGGAAAGCTACGATCCAGTTTTGAATCCAGTACTGAACCGTGAAGTTCGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167395.2
CDS CAA 72 bp TTCACAATTGCAAGTGGCACTCGGAAGCCAAGCCACTaGAGGTTCCGGACTTCTTTGGAGAGTGTTATGATC +
Preference number: 6 (lower is better)
Translates to: FTIASGTRKPSH*RFRTSLESVMI
Trigger: GATCATAACACTCTCCAAAGAAGTCCGGAACCTCAAGTGGCTTGGCTTCCGAGTGCCACTTGCAATTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GCTTTCTGCACTCTGTTCAAGATCTCTGAGAATGTCTaGTGGTCATACATGCAGGTTTCCAAGGAGCGGACC +
Preference number: 6 (lower is better)
Translates to: AFCTLFKISENV*WSYMQVSKERT
Trigger: GGTCCGCTCCTTGGAAACCTGCATGTATGACCACAAGACATTCTCAGAGATCTTGAACAGAGTGCAGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTTGATCTTGGGCTCTCCACCAGGCTTGTGACTGACTaGTGGAGCATCTGTATCCATGTCGACTTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: FDLGLSTRLVTD*WSICIHVDFCF
Trigger: AAAGCAGAAGTCGACATGGATACAGATGCTCCACAAGTCAGTCACAAGCCTGGTGGAGAGCCCAAGATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ATCACCACCGGACCAAACTCTTTCTTGGTTTCCGCATaGTCAAAGGTTCCTCTGGCTTTCCTTATCTGGACC +
Preference number: 6 (lower is better)
Translates to: ITTGPNSFLVSA*SKVPLAFLIWT
Trigger: GGTCCAGATAAGGAAAGCCAGAGGAACCTTTGACAATGCGGAAACCAAGAAAGAGTTTGGTCCGGTGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ATGAAGATAGCCATGTCTGGGCTAACCTTGACTTGTTaGTTCAGCAGCTCACAAGTAATGGGGGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: MKIAMSGLTLTC*FSSSQVMGAEV
Trigger: GACCTCAGCCCCCATTACTTGTGAGCTGCTGAACAAACAAGTCAAGGTTAGCCCAGACATGGCTATCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTGCTGTACAGGATAGGCCGGCTCATGGCTTTCTCTTaGTCTATGTTAGGGAAGTGCTTCAAGGCAACCATG +
Preference number: 6 (lower is better)
Translates to: LLYRIGRLMAFS*SMLGKCFKATM
Trigger: CATGGTTGCCTTGAAGCACTTCCCTAACATAGACAAAGAGAAAGCCATGAGCCGGCCTATCCTGTACAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTCCAGGTCCATCTTACTGGTGAATTCTTTGCCGACTaGATACAGTGCTTCAGTGGACCAGTCACCAAACCA +
Preference number: 6 (lower is better)
Translates to: LQVHLTGEFFAD*IQCFSGPVTKP
Trigger: TGGTTTGGTGACTGGTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTCACCAGTAAGATGGACCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp ATCTTTCTCAGATGTGTGAAAATTGCAACAAGGGCCTGCCTTATCTaGTCCAGCTCCGTGGCAGACAGCAAGTCATTCAGAGGGAAGTCT +
Preference number: 6 (lower is better)
Translates to: IFLRCVKIATRACLI*SSSVADSKSFRGKS
Trigger: AGACTTCCCTCTGAATGACTTGCTGTCTGCCACGGAGCTGGACAAGATAAGGCAGGCCCTTGTTGCAATTTTCACACATCTGAGAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CTCGATGTTGTCAATGTAAAGCCAAGAAGGCGGGAACTGGAACCTTaGTTTTTCCAGCAGACGCTGACCATTGCGGTAGAGTTCAACTTG +
Preference number: 6 (lower is better)
Translates to: LDVVNVKPRRRELEP*FFQQTLTIAVEFNL
Trigger: CAAGTTGAACTCTACCGCAATGGTCAGCGTCTGCTGGAAAAACAAAGGTTCCAGTTCCCGCCTTCTTGGCTTTACATTGACAACATCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GACAGCCAGTTGCTGTACAGGATAGGCCGGCTCATGGCTTTCTCTTaGTCTATGTTAGGGAAGTGCTTCAAGGCAACCATGTCAATGTTT +
Preference number: 6 (lower is better)
Translates to: DSQLLYRIGRLMAFS*SMLGKCFKATMSMF
Trigger: AAACATTGACATGGTTGCCTTGAAGCACTTCCCTAACATAGACAAAGAGAAAGCCATGAGCCGGCCTATCCTGTACAGCAACTGGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GAGTTCAACTTGCTTCTCAAACTGTTTGATCTTCCGTTTCAGAGATaGCACATAGGTGATGAAGGTCACCGCGTCAGAGGTACTGGCTGT +
Preference number: 6 (lower is better)
Translates to: EFNLLLKLFDLPFQR*HIGDEGHRVRGTGC
Trigger: ACAGCCAGTACCTCTGACGCGGTGACCTTCATCACCTATGTGCAATCTCTGAAACGGAAGATCAAACAGTTTGAGAAGCAAGTTGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TCGGGTACTTCGTGTTGCGGATCTTTCTCAGATGTGTaGAAATTGCAACAAGGGCCTGCCTTATCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: SGTSCCGSFSDV*KLQQGPALSCP
Trigger: TGGACAAGATAAGGCAGGCCCTTGTTGCAATTTTCACACATCTGAGAAAGATCCGCAACACGAAGTACCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TTAAAGAAAGGAGCCACTGCATTGCTGATGAAAGAGTaGAGTGTCTCATACGGCGAGTCTTCACTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: LKKGATALLMKE*SVSYGESSLRV
Trigger: CACTCTGAGTGAAGACTCGCCGTATGAGACACTGCACTCTTTCATCAGCAATGCAGTGGCTCCTTTCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TGTTCAAGATCTCTGAGAATGTCTTGTGGTCATACATaGAGGTTTCCAAGGAGCGGACCTCCAGGTCTATCT +
Preference number: 6 (lower is better)
Translates to: CSRSLRMSCGHT*RFPRSGPPGLS
Trigger: AGATAGACCTGGAGGTCCGCTCCTTGGAAACCTGCATGTATGACCACAAGACATTCTCAGAGATCTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ACTGACTTGTGGAGCATCTGTATCCATGTCGACTTCTaGTTTATCCTCAGCTTGTCCAAGAAGAACCTGGGT +
Preference number: 6 (lower is better)
Translates to: TDLWSICIHVDF*FILSLSKKNLG
Trigger: ACCCAGGTTCTTCTTGGACAAGCTGAGGATAAAGCAGAAGTCGACATGGATACAGATGCTCCACAAGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp ATGATGCTGGAAACGCCGGCGAACATTTTCTTGAAGTaGTTCTGCAACTTAGCCACGTTCTTGCTATTCCCA +
Preference number: 6 (lower is better)
Translates to: MMLETPANIFLK*FCNLATFLLFP
Trigger: TGGGAATAGCAAGAACGTGGCTAAGTTGCAGAAGCACTTCAAGAAAATGTTCGCCGGCGTTTCCAGCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TCCACATCGCCATCAAAGACAATCCACTGGCGTTTCTaGAGCTCACCTCTCACATTGTCTATGATCTTTCTC +
Preference number: 6 (lower is better)
Translates to: STSPSKTIHWRF*SSPLTLSMIFL
Trigger: GAGAAAGATCATAGACAATGTGAGAGGTGAGCTGCAGAAACGCCAGTGGATTGTCTTTGATGGCGATGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp CATCTTACTGGTGAATTCTTTGCCGACTTGATACAGTaGTTCAGTGGACCAGTCACCAAACCAGTTCAGCAC +
Preference number: 6 (lower is better)
Translates to: HLTGEFFADLIQ*FSGPVTKPVQH
Trigger: GTGCTGAACTGGTTTGGTGACTGGTCCACTGAAGCACTGTATCAAGTCGGCAAAGAATTCACCAGTAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTACAAGCTTGGCTTTGCGGGTACTGGACCTTGAACTaGTCGTGCAGAGATTCGATGTCATCTTTCACACGT +
Preference number: 6 (lower is better)
Translates to: LQAWLCGYWTLN*SCRDSMSSFTR
Trigger: ACGTGTGAAAGATGACATCGAATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GATCTTGCTTTTGATCAAGGACCTGGTAACGTCTCTTaGGTGAACCAGCTCTGTGATCAAGTGCTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: DLAFDQGPGNVS*VNQLCDQVLQL
Trigger: AAGCTGGAGCACTTGATCACAGAGCTGGTTCACCAAAGAGACGTTACCAGGTCCTTGATCAAAAGCAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TGGCTGAGCCATTCGAAAGATTTGGCGTTGTCGATCTaGCTTTTGATCAAGGACCTGGTAACGTCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: WLSHSKDLALSI*LLIKDLVTSLW
Trigger: CCAAAGAGACGTTACCAGGTCCTTGATCAAAAGCAAGATCGACAACGCCAAATCTTTCGAATGGCTCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp AATCGCATCTGGCTGAGCCATTCGAAAGATTTGGCGTaGTCGATCTTGCTTTTGATCAAGGACCTGGTAACG +
Preference number: 6 (lower is better)
Translates to: NRIWLSHSKDLA*SILLLIKDLVT
Trigger: CGTTACCAGGTCCTTGATCAAAAGCAAGATCGACAACGCCAAATCTTTCGAATGGCTCAGCCAGATGCGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp CCGGCGAACATTTTCTTGAAGTGCTTCTGCAACTTAGCCACGTTCTaGCTATTCCCAATGATCTCAAGCAAATCCTCATCACCCACAAAG +
Preference number: 6 (lower is better)
Translates to: PANIFLKCFCNLATF*LFPMISSKSSSPTK
Trigger: CTTTGTGGGTGATGAGGATTTGCTTGAGATCATTGGGAATAGCAAGAACGTGGCTAAGTTGCAGAAGCACTTCAAGAAAATGTTCGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TACAAGCACACTCTTCAAAGCCCGAAGCCCAAAGTCATAATGGCTTaGAGAAGACAGTTGCTCATCACACAGTTTGAAGAACGGGACGAT +
Preference number: 6 (lower is better)
Translates to: YKHTLQSPKPKVIMA*RRQLLITQFEERDD
Trigger: ATCGTCCCGTTCTTCAAACTGTGTGATGAGCAACTGTCTTCTCAAAGCCATTATGACTTTGGGCTTCGGGCTTTGAAGAGTGTGCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GTCGTCCACTGCTTTCTGCACTCTGTTCAAGATCTCTaGGAATGTCTTGTGGTCATACATGCAGGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: VVHCFLHSVQDL*ECLVVIHAGFQ
Trigger: TTGGAAACCTGCATGTATGACCACAAGACATTCTCAGAGATCTTGAACAGAGTGCAGAAAGCAGTGGACGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CTTTCCTTATCTGGACCAGGAGAGCTTGCCACTTGTTaGGATCTTCCCCTAGCCTGTTGTAAATGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: LSLSGPGELATC*DLPLACCKCFL
Trigger: CAGAAAACATTTACAACAGGCTAGGGGAAGATCTCAACAAGTGGCAAGCTCTCCTGGTCCAGATAAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AGACTCTCTGATGTAGGACTTAAAGAAAGGAGCCACTaGATTGCTGATGAAAGAGTGCAGTGTCTCATACGG +
Preference number: 6 (lower is better)
Translates to: RLSDVGLKERSH*IADERVQCLIR
Trigger: CCGTATGAGACACTGCACTCTTTCATCAGCAATGCAGTGGCTCCTTTCTTTAAGTCCTACATCAGAGAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CTCATTTTACAAGCTTGGCTTTGCGGGTACTGGACCTaGAACTTGTCGTGCAGAGATTCGATGTCATCTTTC +
Preference number: 6 (lower is better)
Translates to: LILQAWLCGYWT*NLSCRDSMSSF
Trigger: GAAAGATGACATCGAATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTGCTTCTCAAACTGTTTGATCTTCCGTTTCAGAGATaGCACATAGGTGATGAAGGTCACCGCGTCAGAGGT +
Preference number: 6 (lower is better)
Translates to: LLLKLFDLPFQR*HIGDEGHRVRG
Trigger: ACCTCTGACGCGGTGACCTTCATCACCTATGTGCAATCTCTGAAACGGAAGATCAAACAGTTTGAGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTCATGGTGATGAAGATAGCCATGTCTGGGCTAACCTaGACTTGTTTGTTCAGCAGCTCACAAGTAATGGGG +
Preference number: 6 (lower is better)
Translates to: FMVMKIAMSGLT*TCLFSSSQVMG
Trigger: CCCCATTACTTGTGAGCTGCTGAACAAACAAGTCAAGGTTAGCCCAGACATGGCTATCTTCATCACCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp CCGAAGCCCAAAGTCATAATGGCTTTGAGAAGACAGTaGCTCATCACACAGTTTGAAGAACGGGACGATCTT +
Preference number: 6 (lower is better)
Translates to: PKPKVIMALRRQ*LITQFEERDDL
Trigger: AAGATCGTCCCGTTCTTCAAACTGTGTGATGAGCAACTGTCTTCTCAAAGCCATTATGACTTTGGGCTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp TCATTTTACAAGCTTGGCTTTGCGGGTACTGGACCTTaGACTTGTCGTGCAGAGATTCGATGTCATCTTTCA +
Preference number: 6 (lower is better)
Translates to: SFYKLGFAGTGP*TCRAEIRCHLS
Trigger: TGAAAGATGACATCGAATCTCTGCACGACAAGTTCAAGGTCCAGTACCCGCAAAGCCAAGCTTGTAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp GAAGCCTCTTCATCAGCTGTTTCCAGTGCCGGTCTTTaGGTGCTTCTGATTTCAGTTCAATTACCAACATGT +
Preference number: 6 (lower is better)
Translates to: EASSSAVSSAGL*VLLISVQLPTC
Trigger: ACATGTTGGTAATTGAACTGAAATCAGAAGCACTCAAAGACCGGCACTGGAAACAGCTGATGAAGAGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp CTCTCTGTGTGCCGTATTTATCCATATCGGGCAAGTTaGTTTCATCACAGAACAAGACCAGCCACTTTCCAA +
Preference number: 6 (lower is better)
Translates to: LSVCRIYPYRAS*FHHRTRPATFQ
Trigger: TTGGAAAGTGGCTGGTCTTGTTCTGTGATGAAATCAACTTGCCCGATATGGATAAATACGGCACACAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp TTTAAGATGATGCTGGAAACGCCGGCGAACATTTTCTaGAAGTGCTTCTGCAACTTAGCCACGTTCTTGCTA +
Preference number: 6 (lower is better)
Translates to: FKMMLETPANIF*KCFCNLATFLL
Trigger: TAGCAAGAACGTGGCTAAGTTGCAGAAGCACTTCAAGAAAATGTTCGCCGGCGTTTCCAGCATCATCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACTCTCTGTGTGCCGTATTTATCCATATCGGGCAAGTaGATTTCATCACAGAACAAGACCAGCCACTTTCCA +
Preference number: 6 (lower is better)
Translates to: TLCVPYLSISGK*ISSQNKTSHFP
Trigger: TGGAAAGTGGCTGGTCTTGTTCTGTGATGAAATCAACTTGCCCGATATGGATAAATACGGCACACAGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp TTATCCTCATTTAAGATGATGCTGGAAACGCCGGCGAACATTTTCTaGAAGTGCTTCTGCAACTTAGCCACGTTCTTGCTATTCCCAATG +
Preference number: 6 (lower is better)
Translates to: LSSFKMMLETPANIF*KCFCNLATFLLFPM
Trigger: CATTGGGAATAGCAAGAACGTGGCTAAGTTGCAGAAGCACTTCAAGAAAATGTTCGCCGGCGTTTCCAGCATCATCTTAAATGAGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS TCA 72 bp ATGTTTTCTGCCTGCATATCCCACAAACACTGGTACTaGAGCCAAACCTTAACATACTGCTCAACTTCAGTC +
Preference number: 6 (lower is better)
Translates to: MFSACISHKHWY*SQTLTYCSTSV
Trigger: GACTGAAGTTGAGCAGTATGTTAAGGTTTGGCTTCAGTACCAGTGTTTGTGGGATATGCAGGCAGAAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp TGCTTTTCCAAAAATCTCCACTTCTGTAACAGACTCTaGCAGAAGTTTAGCCAAGGTGACTCTCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: CFSKNLHFCNRL*QKFSQGDSHLL
Trigger: AAGGAGATGAGAGTCACCTTGGCTAAACTTCTGGCAGAGTCTGTTACAGAAGTGGAGATTTTTGGAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ACTCTTCAAAGCCCGAAGCCCAAAGTCATAATGGCTTaGAGAAGACAGTTGCTCATCACACAGTTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: TLQSPKPKVIMA*RRQLLITQFEE
Trigger: TTCTTCAAACTGTGTGATGAGCAACTGTCTTCTCAAAGCCATTATGACTTTGGGCTTCGGGCTTTGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CCA 72 bp ATTTCTCGGATCCACCGATTAACTCCAGACTGTAATTaGTTAAGGAAAGTTGGGTCTTCAACCTTATCACCA +
Preference number: 6 (lower is better)
Translates to: ISRIHRLTPDCN*LRKVGSSTLSP
Trigger: TGGTGATAAGGTTGAAGACCCAACTTTCCTTAACCAATTACAGTCTGGAGTTAATCGGTGGATCCGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 90 bp GCCAGAAGGGTATTCATTCGTTCCAGGAATCCGGAATCTAAGACGTaGGACTCATCCATTATGAATGCTATCTTTTCATTTTTACAGCCA +
Preference number: 6 (lower is better)
Translates to: ARRVFIRSRNPESKT*DSSIMNAIFSFLQP
Trigger: TGGCTGTAAAAATGAAAAGATAGCATTCATAATGGATGAGTCCAACGTCTTAGATTCCGGATTCCTGGAACGAATGAATACCCTTCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp ATTTTCTTGAAGTGCTTCTGCAACTTAGCCACGTTCTaGCTATTCCCAATGATCTCAAGCAAATCCTCATCA +
Preference number: 6 (lower is better)
Translates to: IFLKCFCNLATF*LFPMISSKSSS
Trigger: TGATGAGGATTTGCTTGAGATCATTGGGAATAGCAAGAACGTGGCTAAGTTGCAGAAGCACTTCAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS CAA 72 bp GTATTCATTCGTTCCAGGAATCCGGAATCTAAGACGTaGGACTCATCCATTATGAATGCTATCTTTTCATTT +
Preference number: 6 (lower is better)
Translates to: VFIRSRNPESKT*DSSIMNAIFSF
Trigger: AAATGAAAAGATAGCATTCATAATGGATGAGTCCAACGTCTTAGATTCCGGATTCCTGGAACGAATGAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14
CDS GCA 72 bp AATCCAAGTAATGTAGGTATTTGGGTCAATAGAAGTTaGTTTTCCAAAAATCTCCACTTCTGTAACAGACTC +
Preference number: 6 (lower is better)
Translates to: NPSNVGIWVNRS*FSKNLHFCNRL
Trigger: GAGTCTGTTACAGAAGTGGAGATTTTTGGAAAAGCAACTTCTATTGACCCAAATACCTACATTACTTGGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000018851.14