RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DYDC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021791

Ensembl transcript IDs: ENSMUST00000022316.6

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCTGCCACCTCTGCCAGTaGCTGGGTCAGGCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGCHLCQ*LGQAGS
Trigger: GGAACCGGCCTGACCCAGGCACTGGCAGAGGTGGCA...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR GCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCACTGGGCCGCACTCTTaGCACCTCTGCCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGTGPHS*HLCQCL
Trigger: CAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGT...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR CCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCACCTCTGCCAGTGCCTaGGTCAGGCCGGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGTSASA*VRPVPK
Trigger: CTTTGGAACCGGCCTGACCCAGGCACTGGCAGAGGT...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR TCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCGGCTGGGGTCTTGTCTaGGGAAAAAGAGGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGGWGLV*GKRGRG
Trigger: CCCTCGACCTCTTTTTCCTCAGACAAGACCCCAGCC...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR CCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCACTCTATTGGGTCACTaGGCCGCACTCTTGCCACCT +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGTLLGH*AALLPP
Trigger: AGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGT...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR CCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCAGCCAGGTACTCTATTaGGTCACTGGGCCGCACTCT +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGSQVLY*VTGPHS
Trigger: AGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCT...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR TCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCGAGGGCAGTTCCTGGTaGCACTTTTCACACTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGEGSSW*HFSHFC
Trigger: GCAGAAGTGTGAAAAGTGTCACCAGGAACTGCCCTC...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR TCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCGAGGGAATAGCCCTTTaGGGCATCTCAGAAATCACA +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGEGIAL*GISEIT
Trigger: TGTGATTTCTGAGATGCCTCAAAGGGCTATTCCCTC...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR GCA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCCATTTCTGTTGTTTTTaGTTCCTCAGCGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGHFCCF*FLSASV
Trigger: GACAGAAGCGCTGAGGAAGCAAAAACAACAGAAATG...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS GCA 90 bp AAGCCAGTGAGCCAGGTACTCTATTGGGTCACTGGGCCGCACTCTTaGCACCTCTGCCAGTGCCTGGGTCAGGCCGGTTCCAAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: KPVSQVLYWVTGPHS*HLCQCLGQAGSKAV
Trigger: AACTGCTTTGGAACCGGCCTGACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTCACTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS GCA 90 bp AGCCAGGTACTCTATTGGGTCACTGGGCCGCACTCTTGCCACCTCTaGCAGTGCCTGGGTCAGGCCGGTTCCAAAGCAGTTCTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: SQVLYWVTGPHSCHL*QCLGQAGSKAVLQV
Trigger: TACCTGAAGAACTGCTTTGGAACCGGCCTGACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS CCA 90 bp TCCTATAATGGTAAAGCCAGTGAGCCAGGTACTCTATTGGGTCACTaGGCCGCACTCTTGCCACCTCTGCCAGTGCCTGGGTCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: SYNGKASEPGTLLGH*AALLPPLPVPGSGR
Trigger: CCGGCCTGACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTCACTGGCTTTACCATTATAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS CCA 90 bp AGTTATACTCCTATAATGGTAAAGCCAGTGAGCCAGGTACTCTATTaGGTCACTGGGCCGCACTCTTGCCACCTCTGCCAGTGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SYTPIMVKPVSQVLY*VTGPHSCHLCQCLG
Trigger: ACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTCACTGGCTTTACCATTATAGGAGTATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR CAA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCCACTGGGCCGCACTCTaGCCACCTCTGCCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGHWAAL*PPLPVP
Trigger: AGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTG...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR CAA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCGAGCCAGGTACTCTATaGGGTCACTGGGCCGCACTC +
Preference number: 5 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGEPGTL*GHWAAL
Trigger: GAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTC...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR CAA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCTGCAGGGCTGGGGTCTaGTCTGAGGAAAAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGCRAGV*SEEKEV
Trigger: GACCTCTTTTTCCTCAGACAAGACCCCAGCCCTGCA...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS-3UTR CAA 90 bp CACCTTTCTCTAACAGCTAATTCAAAACTTCACATGATTAAAGGTAGTTATGGCGCATTTCTGTTGTTTTaGCTTCCTCAGCGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: HLSLTANSKLHMIKGSYGAFLLF*LPQRFC
Trigger: ACAGAAGCGCTGAGGAAGCAAAAACAACAGAAATGC...GCCATAACTACCTTTAATCATGTGAAGTTTTGAATTAGCTGTTAGAGAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS GCA 72 bp AGCCAGGTACTCTATTGGGTCACTGGGCCGCACTCTTaGCACCTCTGCCAGTGCCTGGGTCAGGCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: SQVLYWVTGPHS*HLCQCLGQAGS
Trigger: GGAACCGGCCTGACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS CAA 72 bp GAGCCAGGTACTCTATTGGGTCACTGGGCCGCACTCTaGCCACCTCTGCCAGTGCCTGGGTCAGGCCGGTTC +
Preference number: 6 (lower is better)
Translates to: EPGTLLGHWAAL*PPLPVPGSGRF
Trigger: GAACCGGCCTGACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS GCA 72 bp TGGGTCACTGGGCCGCACTCTTGCCACCTCTGCCAGTaGCTGGGTCAGGCCGGTTCCAAAGCAGTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: WVTGPHSCHLCQ*LGQAGSKAVLQ
Trigger: CTGAAGAACTGCTTTGGAACCGGCCTGACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS CCA 72 bp GGTAAAGCCAGTGAGCCAGGTACTCTATTGGGTCACTaGGCCGCACTCTTGCCACCTCTGCCAGTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: GKASEPGTLLGH*AALLPPLPVPG
Trigger: CCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTCACTGGCTTTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS CAA 90 bp AAAGCCAGTGAGCCAGGTACTCTATTGGGTCACTGGGCCGCACTCTaGCCACCTCTGCCAGTGCCTGGGTCAGGCCGGTTCCAAAGCAGT +
Preference number: 6 (lower is better)
Translates to: KASEPGTLLGHWAAL*PPLPVPGSGRFQSS
Trigger: ACTGCTTTGGAACCGGCCTGACCCAGGCACTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTCACTGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS TCA 72 bp GGGTGCCGTGTCTTCCTGCAGGGCTGGGGTCTTGTCTaGGGAAAAAGAGGTCGAGGGCAGTTCCTGGTGACA +
Preference number: 6 (lower is better)
Translates to: GCRVFLQGWGLV*GKRGRGQFLVT
Trigger: TGTCACCAGGAACTGCCCTCGACCTCTTTTTCCTCAGACAAGACCCCAGCCCTGCAGGAAGACACGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS CCA 72 bp CCTATAATGGTAAAGCCAGTGAGCCAGGTACTCTATTaGGTCACTGGGCCGCACTCTTGCCACCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: PIMVKPVSQVLY*VTGPHSCHLCQ
Trigger: CTGGCAGAGGTGGCAAGAGTGCGGCCCAGTGACCCAATAGAGTACCTGGCTCACTGGCTTTACCATTATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6
CDS CAA 72 bp TTGAGGCATCTCAGAAATCACACGCGAGGCACCCGGTaGAGATTCCTGCCTCATAGTCTTCTCCTCAAGGGG +
Preference number: 6 (lower is better)
Translates to: LRHLRNHTRGTR*RFLPHSLLLKG
Trigger: CCCCTTGAGGAGAAGACTATGAGGCAGGAATCTCAACCGGGTGCCTCGCGTGTGATTTCTGAGATGCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000022316.6