Pregenerated sensors for DXO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040482Ensembl transcript IDs: ENSMUST00000046244.15, ENSMUST00000172612.2, ENSMUST00000173063.8, ENSMUST00000173874.8, ENSMUST00000173995.2, ENSMUST00000174092.8, ENSMUST00000174569.2, ENSMUST00000174684.2, ENSMUST00000180043.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGAGGGCAGGAAGGCATAGGGTGCGTCACGATGGACAGACACAGTaGCAGGGCCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: MRAGRHRVRHDGQTQ*QGHQVPRRRGGQAW Trigger: CCAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCATCGTGACGCACCCTATGCCTTCCTGCCCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR TCA 90 bp | ATGAGGGCAGGAAGGCATAGGGTGCGTCACGATGGACAGACACAGTaGCAGGGCCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: MRAGRHRVRHDGQTQ*QGHQVPRRRGGQAC Trigger: ACAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCATCGTGACGCACCCTATGCCTTCCTGCCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| 3UTR CCA 90 bp | TGGACAGACACAGTGACAGGGCCACCAGGTTCCCAGGAGAAGAGGTaGACAAGCCTGGGATCGTCCTGGACTACTGTGCTCTGGGCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: WTDTVTGPPGSQEKR*TSLGSSWTTVLWAK Trigger: CTTTGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR CCA 90 bp | GGAACAGACGAAACCTTCTGGGTTCCGGAAGCCGGCAACAACATGTaGGACCCCCGGGAGGAACGACTGAGCCCACCATTTCAGCAACTT | + |
|
Preference number: 1 (lower is better) Translates to: GTDETFWVPEAGNNM*DPREERLSPPFQQL Trigger: AAGTTGCTGAAATGGTGGGCTCAGTCGTTCCTCCCGGGGGTCCCACATGTTGTTGCCGGCTTCCGGAACCCAGAAGGTTTCGTCTGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174684.2 |
||
| 3UTR CCA 90 bp | CCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTaGACTACTGTGCTCTGGGCAAAGCTAAGGAAGGCAGCACAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: PPGSQEKRWTSLGSS*TTVLWAKLRKAAQK Trigger: CTTCTGTGCTGCCTTCCTTAGCTTTGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR CCA 90 bp | TGGACAGACACAGTGACAGGGCCACCAGGTTCCCAGGAGAAGAGGTaGACAAGCCTGTGGAAGACAGAGGTGTGGGGTGAAGCCAGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: WTDTVTGPPGSQEKR*TSLWKTEVWGEARD Trigger: ATCTCTGGCTTCACCCCACACCTCTGTCTTCCACAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| 3UTR TCA 90 bp | CCAGGAGAAGAGGTGGACAAGCCTGTGGAAGACAGAGGTGTGGGGTaGAGCCAGAGATTGAGCCGGGATCCAGAGGCAGTGCACAAACAT | + |
|
Preference number: 1 (lower is better) Translates to: PGEEVDKPVEDRGVG*SQRLSRDPEAVHKH Trigger: ATGTTTGTGCACTGCCTCTGGATCCCGGCTCAATCTCTGGCTTCACCCCACACCTCTGTCTTCCACAGGCTTGTCCACCTCTTCTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| 3UTR CCA 90 bp | GAGAAGAGGTGGACAAGCCTGGGATCGTCCTGGACTACTGTGCTCTaGGCAAAGCTAAGGAAGGCAGCACAGAAGTTCATGCACACAGAG | + |
|
Preference number: 1 (lower is better) Translates to: EKRWTSLGSSWTTVL*AKLRKAAQKFMHTE Trigger: CTCTGTGTGCATGAACTTCTGTGCTGCCTTCCTTAGCTTTGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCGTCACGATGGACAGACACAGTGACAGGGCCACCAGGTTCCCAGGAGAAGGAGAACAGGAGAGGGTaGTTTCCCAGGCGGCTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: GASRWTDTVTGPPGSQEKENRRG*FPRRLR Trigger: ACGCAGCCGCCTGGGAAACCACCCTCTCCTGTTCTC...CTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCATCGTGACGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173063.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTGGACTACTGTGCTCTGGGCAAGGTTTCCCAGGCGGCTaGGTAGCACAGAGCAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: RRRGGQAWDRPGLLCSGQGFPGG*VAQSSR Trigger: CCTACTGCTCTGTGCTACGCAGCCGCCTGGGAAACC...TTGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173063.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGGGTGCGTCACGATGGACAGACACAGTGACAGGGCCACCAGGTTCCCAGGAAGCCTGGGATCGTCCTaGACTACTGTGCTCTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: IGCVTMDRHSDRATRFPGSLGSS*TTVLWA Trigger: TGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCT...TCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCATCGTGACGCACCCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAGACACAGTGACAGGGCCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTTCCCAGGAGAAGAGGTaGACAAGCCTGTGGAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: DRHSDRATRFPGEEVDKPSQEKR*TSLWKT Trigger: TGTCTTCCACAGGCTTGTCCACCTCTTCTCCTGGGA...AGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTGGACTACTGTGCAGCACAGAAGTTCATaGACACAGAGGGATTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PGSQEKRWTSLGSSWTTVQHRSS*TQRDSS Trigger: GCTGGAATCCCTCTGTGTGCATGAACTTCTGTGCTG...CACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGAACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTGGACTACTGTGCTCTGGGCCTTCTCGGTCATTCCTaGCATTTTCAAACATCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PGEEVDKPGIVLDYCALGLLGHS*HFQTSP Trigger: TGGAGATGTTTGAAAATGTCAGGAATGACCGAGAAG...GCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173063.8 |
||
| 3UTR CCA 72 bp | GGCCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTaGGATCGTCCTGGACTACTGTGCTCTGGGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GHQVPRRRGGQA*DRPGLLCSGQS Trigger: GCTTTGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR TCA 72 bp | GGAAGGCATAGGGTGCGTCACGATGGACAGACACAGTaGCAGGGCCACCAGGTTCCCAGGAGAAGAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRHRVRHDGQTQ*QGHQVPRRRGG Trigger: TCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCATCGTGACGCACCCTATGCCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172612.2 ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR CCA 72 bp | GAAACCTTCTGGGTTCCGGAAGCCGGCAACAACATGTaGGACCCCCGGGAGGAACGACTGAGCCCACCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ETFWVPEAGNNM*DPREERLSPPF Trigger: AAATGGTGGGCTCAGTCGTTCCTCCCGGGGGTCCCACATGTTGTTGCCGGCTTCCGGAACCCAGAAGGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174684.2 |
||
| 3UTR TCA 72 bp | TGGTGGGAGGTCTTGGGTCATAGTCTCCACATACCATaGGGGCAGGAAGGCATAGGGTGCGTCACGATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WWEVLGHSLHIP*GQEGIGCVTMD Trigger: GTCCATCGTGACGCACCCTATGCCTTCCTGCCCTCATGGTATGTGGAGACTATGACCCAAGACCTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172612.2 ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR CCA 72 bp | TCCCAGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTaGACTACTGTGCTCTGGGCAAAGCTAAGGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQEKRWTSLGSS*TTVLWAKLRKA Trigger: TGCCTTCCTTAGCTTTGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR TCA 72 bp | CTGTGGAAGACAGAGGTGTGGGGTGAAGCCAGAGATTaGGCCGGGATCCAGAGGCAGTGCACAAACATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LWKTEVWGEARD*AGIQRQCTNMK Trigger: CTTCATGTTTGTGCACTGCCTCTGGATCCCGGCTCAATCTCTGGCTTCACCCCACACCTCTGTCTTCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| 3UTR CCA 72 bp | TGGACAAGCCTGGGATCGTCCTGGACTACTGTGCTCTaGGCAAAGCTAAGGAAGGCAGCACAGAAGTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: WTSLGSSWTTVL*AKLRKAAQKFM Trigger: CATGAACTTCTGTGCTGCCTTCCTTAGCTTTGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| 3UTR CCA 72 bp | TTGGGAGAGGGAGTCTTTGAGAGTGGTGGGAGGTCTTaGGTCATAGTCTCCACATACCATGAGGGCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGEGVFESGGRS*VIVSTYHEGRK Trigger: CTTCCTGCCCTCATGGTATGTGGAGACTATGACCCAAGACCTCCCACCACTCTCAAAGACTCCCTCTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172612.2 ENSMUST00000173063.8 ENSMUST00000174569.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGGGACCCCCGGGAGGAACGACTGAGCCCACCATTTCAGCAACTTGTGTCGAGGAGGGGTGGCCGTaGAAGCCTCTGGGCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVGPPGGTTEPTISATCVEEGWP*KPLGPS Trigger: GCTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTC...GACACAAGTTGCTGAAATGGTGGGCTCAGTCGTTCCTCCCGGGGGTCCCACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174684.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTGGACTACTGTGCTCTGGGCAGGAGGGAGGCTGTGTaGAAGGAGCCTGGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGEEVDKPGIVLDYCALGRREAV*KEPGGS Trigger: TGAACCCCCAGGCTCCTTGCACACAGCCTCCCTCCT...GCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174569.2 |
||
| CDS-3UTR TCA 90 bp | GAACAGACGAAACCTTCTGGGTTCCGGAAGCCGGCAACAACATGTGGGACCCCCTGTAGCCCATGTACATaGGCTCCCGGAGGAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQTKPSGFRKPATTCGTPCSPCT*APGGGV Trigger: CACCCCTCCTCCGGGAGCTCATGTACATGGGCTACA...GGGGGTCCCACATGTTGTTGCCGGCTTCCGGAACCCAGAAGGTTTCGTCTGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174684.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGTCCTGTCACCGTGGCCCCTaGCAGCCAGCCGGGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDPLRNTPLLSARSPDLSCHRGP*QPAGTP Trigger: GGGGGTCCCGGCTGGCTGGCAGGGGCCACGGTGACA...GGACAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | GTGACAGGGCCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGTGGAAGACAAGGAGGGAGGCTGTGTaGAAGGAGCCTGGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTGPPGSQEKRWTSLWKTRREAV*KEPGGS Trigger: TGAACCCCCAGGCTCCTTGCACACAGCCTCCCTCCT...TGTCTTCCACAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGCTCCCGGAGGAGGGGTaGCCGTGCAAGCCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARDPLRNTPLLSARSPDLLPEEG*PCKPLG Trigger: GCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAG...CAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | AAGGTCTTTAAGGAACAGACGAAACCTTCTGGGTTCCGGAAGCCGGCAACAACACTCCCGGAGGAGGGGTaGCCGTGCAAGCCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVFKEQTKPSGFRKPATTLPEEG*PCKPLG Trigger: GCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAG...TGTTGTTGCCGGCTTCCGGAACCCAGAAGGTTTCGTCTGTTCCTTAAAGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174684.2 |
||
| CDS-3UTR CCA 90 bp | GACAGACACAGTGACAGGGCCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTTGTGTGCAAGGAGCCTaGGGGTTCAGGCAGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: DRHSDRATRFPGEEVDKPCVQGA*GFRQST Trigger: GGTAGACTGCCTGAACCCCCAGGCTCCTTGCACACA...AGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172612.2 ENSMUST00000174569.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTGGACTACTGTGGTTTGTCCCTCCAGCTaGTTCCGGTGTTCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PGSQEKRWTSLGSSWTTVVCPSS*FRCSRT Trigger: GGTCCTGGAACACCGGAACCAGCTGGAGGGACAAAC...CACAGTAGTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGAACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173063.8 |
||
| CDS-3UTR CCA 90 bp | AGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGTCCCTCTCCATGTCACCGTaGCCCCTGCCAGCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RDPLRNTPLLSARSPDLSLSMSP*PLPASR Trigger: CCGGCTGGCTGGCAGGGGCCACGGTGACATGGAGAG...GGACAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | ATAGGGTGCGTCACGATGGACAGACACAGTGACAGGGCCACCAGGTTCCCAGGATACCTGGGATCGTCCTaGACTACTGTGCTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGCVTMDRHSDRATRFPGYLGSS*TTVLWA Trigger: TGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGTA...TCCTGGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCATCGTGACGCACCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| CDS-3UTR GCA 90 bp | GACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCATTGGAACCGGGAGGCTaGCAGCTGCCAGCCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTARDPLRNTPLLSARSPLEPGG*QLPALL Trigger: CAGGAGGGCTGGCAGCTGGCAGCCTCCCGGTTCCAA...TGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | TTTAAGGAACAGACGAAACCTTCTGGGTTCCGGAAGCCGGCAACAACATGTGGGGAGAACAGGAGAGGGTaGTTTCCCAGGCGGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEQTKPSGFRKPATTCGENRRG*FPRRLR Trigger: GCGCAGCCGCCTGGGAAACCACCCTCTCCTGTTCTC...CCCACATGTTGTTGCCGGCTTCCGGAACCCAGAAGGTTTCGTCTGTTCCTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174684.2 |
||
| CDS-3UTR GCA 90 bp | GACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGGAGGAGGGGTGGCCGTaGAAGCCTCTGGGCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSIQTQQETHLETRLYYLEEGWP*KPLGPS Trigger: GCTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTC...CAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | TTTAAGGAACAGACGAAACCTTCTGGGTTCCGGAAGCCGGCAACAACATGTGGGAGGTACAGTGTCCCTTaGAACCGGGAGGCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKEQTKPSGFRKPATTCGRYSVP*NREAAS Trigger: GCTGGCAGCCTCCCGGTTCCAAGGGACACTGTACCT...CCCACATGTTGTTGCCGGCTTCCGGAACCCAGAAGGTTTCGTCTGTTCCTTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174684.2 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGGATGGACAGACACAGTaGCAGGGCCACCAGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARDPLRNTPLLSARSPDLDGQTQ*QGHQVP Trigger: GGGAACCTGGTGGCCCTGTCACTGTGTCTGTCCATC...CAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | TGGAACAGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCAGGAGGGAGGCTGTGTaGAAGGAGCCTGGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WNRGDSIQTQQETHLETRRREAV*KEPGGS Trigger: TGAACCCCCAGGCTCCTTGCACACAGCCTCCCTCCT...GCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCTGTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACGCAGCCCAGTTCGGATaGACGCCGGTAGAACGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TARDPLRNTPLLSARSPDAAQFG*TPVERE Trigger: TTCCCGTTCTACCGGCGTCCATCCGAACTGGGCTGC...GTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | GGAGTCTTTGAGAGTGGTGGGAGGTCTTGGGTCATAGTCTCCACATACCATGAGTGTGTGCAAGGAGCCTaGGGGTTCAGGCAGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: GVFESGGRSWVIVSTYHECVQGA*GFRQST Trigger: GGTAGACTGCCTGAACCCCCAGGCTCCTTGCACACA...CTCATGGTATGTGGAGACTATGACCCAAGACCTCCCACCACTCTCAAAGACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172612.2 ENSMUST00000174569.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAAGCTGCCAGCCCTCCTaGCGCTCATACGGCGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQTQQETHLETRLYYLHGSCQPS*RSYGVV Trigger: GACCACGCCGTATGAGCGGCAGGAGGGCTGGCAGCT...TCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | AGTGGTGGGAGGTCTTGGGTCATAGTCTCCACATACCATGAGGGCAGGAAGGCACAGCACAGAAGTTCATaGACACAGAGGGATTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGRSWVIVSTYHEGRKAQHRSS*TQRDSS Trigger: GCTGGAATCCCTCTGTGTGCATGAACTTCTGTGCTG...TGCCTTCCTGCCCTCATGGTATGTGGAGACTATGACCCAAGACCTCCCACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| CDS-3UTR CCA 90 bp | GACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGCATCTCCATGGTACTaGCGTTGTGCGTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTARDPLRNTPLLSARSPASPWY*RCASRE Trigger: CTCCCTGGACGCACAACGCCAGTACCATGGAGATGC...TGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | CAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGTTCCTCGTCCCGGGGCTaGTATCGGTCAGGGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QETHLETRLYYLHGAQTCSSSRG*YRSGYP Trigger: TGGATACCCTGACCGATACCAGCCCCGGGACGAGGA...ACAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | CAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGTTGGTCCAACCTCTCTTaGACTTCCTCGTCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QETHLETRLYYLHGAQTCWSNLS*TSSSRG Trigger: GCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCA...ACAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | TCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCAGGTACAGTGTCCCTTaGAACCGGGAGGCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDTARDPLRNTPLLSARSRYSVP*NREAAS Trigger: GCTGGCAGCCTCCCGGTTCCAAGGGACACTGTACCT...GCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | CAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCTGTGTGCAAGGAGCCTaGGGGTTCAGGCAGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QTQQETHLETRLYYLHGACVQGA*GFRQST Trigger: GGTAGACTGCCTGAACCCCCAGGCTCCTTGCACACA...GGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | AGTGGTGGGAGGTCTTGGGTCATAGTCTCCACATACCATGAGGGCAGGAAGGCATGGACTACTGTGCTCTaGGCAAAGCTAAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGRSWVIVSTYHEGRKAWTTVL*AKLRKA Trigger: TGCCTTCCTTAGCTTTGCCCAGAGCACAGTAGTCCA...TGCCTTCCTGCCCTCATGGTATGTGGAGACTATGACCCAAGACCTCCCACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGTCCTCCCAGGAGAAGAGGTaGACAAGCCTGGGATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDPLRNTPLLSARSPDLSSQEKR*TSLGSS Trigger: GGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGA...GGACAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR TCA 90 bp | CCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGTGGAAGACAGAGGTGTGGCTTCTCGGTCATTCCTaGCATTTTCAAACATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPGSQEKRWTSLWKTEVWLLGHS*HFQTSP Trigger: TGGAGATGTTTGAAAATGTCAGGAATGACCGAGAAG...CCACACCTCTGTCTTCCACAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172612.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTAGTCTCCACATACCATaGGGGCAGGAAGGCATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQETHLETRLYYLHGAQTSLHIP*GQEGIG Trigger: CCCTATGCCTTCCTGCCCTCATGGTATGTGGAGACT...AGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGCAGGAAGGCATAGGGTaGGTCACGATGGACAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ARDPLRNTPLLSARSPDLQEGIG*VTMDRH Trigger: GTGTCTGTCCATCGTGACGCACCCTATGCCTTCCTG...CAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | GTAACTTGGAACAGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAGCTCGGGCATCTCCATaGTACTGGCGTTGTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTWNRGDSIQTQQETHLEARASP*YWRCAS Trigger: GGACGCACAACGCCAGTACCATGGAGATGCCCGAGC...TTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCTGTTCCAAGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | ACTTGGAACAGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACAGAGAACAGGAGAGGGTaGTTTCCCAGGCGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TWNRGDSIQTQQETHLETENRRG*FPRRLR Trigger: ACGCAGCCGCCTGGGAAACCACCCTCTCCTGTTCTC...TGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCTGTTCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR TCA 90 bp | GACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGTGTAGCCCATGTACATaGGCTCCCGGAGGAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSIQTQQETHLETRLYYLCSPCT*APGGGV Trigger: CACCCCTCCTCCGGGAGCTCATGTACATGGGCTACA...CAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | ACTTGGAACAGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACAATGGTACTGGCGTTGTaGGTCCAGGGAGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TWNRGDSIQTQQETHLETMVLAL*VQGEAA Trigger: GGCTGCTTCTCCCTGGACGCACAACGCCAGTACCAT...TGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCTGTTCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | GGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATGGTTTCCCAGGCGGCTaGGTAGCACAGAGCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDSIQTQQETHLETRLYYGFPGG*VAQSSR Trigger: CCTACTGCTCTGTGCTACGCAGCCGCCTGGGAAACC...ATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | ACTTGGAACAGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACAGCCCGGGGGAGTTTGTaGAAAGGCTTTTCCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TWNRGDSIQTQQETHLETARGSL*KGFSTS Trigger: AGAGGTGGAAAAGCCTTTGCACAAACTCCCCCGGGC...TGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCTGTTCCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | GACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGAGCCTGGGATCGTCCTaGACTACTGTGCTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSIQTQQETHLETRLYYLSLGSS*TTVLWA Trigger: TGCCCAGAGCACAGTAGTCCAGGACGATCCCAGGCT...CAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR GCA 90 bp | CAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAGCCCAGACTTGTCAGCACAGAAGTTCATaGACACAGAGGGATTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QETHLETRLYYLHGAQTCQHRSS*TQRDSS Trigger: GCTGGAATCCCTCTGTGTGCATGAACTTCTGTGCTG...ACAAGTCTGGGCTCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | GTAACTTGGAACAGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAGCCGCTCATACGGCGTaGTCAGCAATTTTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTWNRGDSIQTQQETHLEAAHTA*SAILSG Trigger: ACCTGACAAAATTGCTGACCACGCCGTATGAGCGGC...TTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCTGTTCCAAGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CCA 90 bp | ATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGATGGACTACTGTGCTCTaGGCAAAGCTAAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQTQQETHLETRLYYLHGWTTVL*AKLRKA Trigger: TGCCTTCCTTAGCTTTGCCCAGAGCACAGTAGTCCA...TCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATCTTCTCGGTCATTCCTaGCATTTTCAAACATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGDSIQTQQETHLETRLYLLGHS*HFQTSP Trigger: TGGAGATGTTTGAAAATGTCAGGAATGACCGAGAAG...ATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS CCA 90 bp | CCCATGTACATGAGCTCCCGGAGGAGGGGTGGCCGTGCAAGCCTCTaGGCCCGAGCAGCCGGGGTCTCCACCTCACTTAGGTACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PMYMSSRRRGGRASL*ARAAGVSTSLRYSV Trigger: GACACTGTACCTAAGTGAGGTGGAGACCCCGGCTGCTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAGCTCATGTACATGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000174684.2 ENSMUST00000180043.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACCAGGTTCCCAGGAGAAGAGGTGGACAAGCCTGGGATCGTCCTGGACGGGGAGCCTCCGGGTTaGTCCCTCCAGCTGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RATRFPGEEVDKPGIVLDGEPPG*SLQLVP Trigger: CGGAACCAGCTGGAGGGACAAACCCGGAGGCTCCCC...GTCCAGGACGATCCCAGGCTTGTCCACCTCTTCTCCTGGGAACCTGGTGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173063.8 |
||
| CDS CCA 90 bp | CTGCTCAAATTTGTAGCCCATGTACATGAGCTCCCGGAGGAGGGGTaGCCGTGCAAGCCTCTGGGCCCGAGCAGCCGGGGTCTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLKFVAHVHELPEEG*PCKPLGPSSRGLHL Trigger: GAGGTGGAGACCCCGGCTGCTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAGCTCATGTACATGGGCTACAAATTTGAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000174684.2 ENSMUST00000180043.8 |
||
| CDS TCA 90 bp | AGGCGGCTGCGCACATGTACTGCTCAAATTTGTAGCCCATGTACATaGGCTCCCGGAGGAGGGGTGGCCGTGCAAGCCTCTGGGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLRTCTAQICSPCT*APGGGVAVQASGPE Trigger: CTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAGCTCATGTACATGGGCTACAAATTTGAGCAGTACATGTGCGCAGCCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174684.2 |
||
| CDS GCA 90 bp | GCTGTAGTAGCGGAGGGCTCGGGCATCTCCATGGTACTGGCGTTGTaGGTCCAGGGAGAAGCAGCCCAGTTCGGATGGACGCCGGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AVVAEGSGISMVLAL*VQGEAAQFGWTPVE Trigger: TTCTACCGGCGTCCATCCGAACTGGGCTGCTTCTCCCTGGACGCACAACGCCAGTACCATGGAGATGCCCGAGCCCTCCGCTACTACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS CCA 90 bp | ATGGTACTGGCGTTGTGCGTCCAGGGAGAAGCAGCCCAGTTCGGATaGACGCCGGTAGAACGGGAAGGGTCCCGAGTACAGAGAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MVLALCVQGEAAQFG*TPVEREGSRVQRGL Trigger: CAGCCCTCTCTGTACTCGGGACCCTTCCCGTTCTACCGGCGTCCATCCGAACTGGGCTGCTTCTCCCTGGACGCACAACGCCAGTACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS TCA 90 bp | TTCCGGAAGCCGGCAACAACATGTGGGACCCCCGGGAGGAACGACTaGGCCCACCATTTCAGCAACTTGTGTCCCTCCAGCTGGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FRKPATTCGTPGRND*AHHFSNLCPSSWFR Trigger: CCGGAACCAGCTGGAGGGACACAAGTTGCTGAAATGGTGGGCTCAGTCGTTCCTCCCGGGGGTCCCACATGTTGTTGCCGGCTTCCGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174092.8 |
||
| CDS TCA 90 bp | GTTTGTCTGCGCACATGTACTGCTCAAATTTGTAGCCCATGTACATaGGCTCCCGGAGGAGGGGTGGCCGTGCAAGCCTCTGGGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCLRTCTAQICSPCT*APGGGVAVQASGPE Trigger: CTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAGCTCATGTACATGGGCTACAAATTTGAGCAGTACATGTGCGCAGACAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000180043.8 |
||
| CDS CCA 90 bp | CGCAGCAAATGGTCCAACCTCTCTTGGACTTCCTCGTCCCGGGGCTaGTATCGGTCAGGGTATCCATCTCTGAGGTCAAAGTCCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSKWSNLSWTSSSRG*YRSGYPSLRSKSGP Trigger: AGGCCCGGACTTTGACCTCAGAGATGGATACCCTGACCGATACCAGCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCATTTGCTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS CCA 90 bp | TTCCGGTGTTCCAGGACCCAGCGCAGCAAATGGTCCAACCTCTCTTaGACTTCCTCGTCCCGGGGCTGGTATCGGTCAGGGTATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FRCSRTQRSKWSNLS*TSSSRGWYRSGYPS Trigger: AGATGGATACCCTGACCGATACCAGCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCATTTGCTGCGCTGGGTCCTGGAACACCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS-3UTR CAA 90 bp | GGACCCCCGGGAGGAACGACTGAGCCCACCATTTCAGCAACTTGTGTCTGTAAAATGGTCCAACCTCTCTaGGACTTCCTCGTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPPGGTTEPTISATCVCKMVQPL*DFLVPG Trigger: CCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCAT...TTTACAGACACAAGTTGCTGAAATGGTGGGCTCAGTCGTTCCTCCCGGGGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173063.8 |
||
| CDS CCA 90 bp | CACAGAGCAGTAGGCCACGTTGGTGTTAACTTCCCCAGAGGGGTCTaGGGAGCCTCCGGGTTTGTCTGCGCACATGTACTGCTCAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HRAVGHVGVNFPRGV*GASGFVCAHVLLKF Trigger: AAATTTGAGCAGTACATGTGCGCAGACAAACCCGGAGGCTCCCCAGACCCCTCTGGGGAAGTTAACACCAACGTGGCCTACTGCTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000180043.8 |
||
| CDS-3UTR CAA 90 bp | TGGAACAGAGGTGACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCGCGTGGTCAGCAATTTaGTCAGGTGCCCTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WNRGDSIQTQQETHLETRAWSAI*SGALSM Trigger: CATGGAGAGGGCACCTGACAAAATTGCTGACCACGC...GCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTCACCTCTGTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CAA 90 bp | ATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGCACGGAATGGTCCAACCTCTCTaGGACTTCCTCGTCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IQTQQETHLETRLYYLHGMVQPL*DFLVPG Trigger: CCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCAT...TCCGTGCAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS-3UTR CAA 90 bp | GACTCCATTCAGACACAGCAAGAGACCCACTTAGAAACACGCCTTTATTATCTGTCCATGGTACTGGCGTaGTGCGTCCAGGGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSIQTQQETHLETRLYYLSMVLA*CVQGEA Trigger: TGCTTCTCCCTGGACGCACAACGCCAGTACCATGGA...CAGATAATAAAGGCGTGTTTCTAAGTGGGTCTCTTGCTGTGTCTGAATGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046244.15 |
||
| CDS CCA 72 bp | ATGAGCTCCCGGAGGAGGGGTGGCCGTGCAAGCCTCTaGGCCCGAGCAGCCGGGGTCTCCACCTCACTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: MSSRRRGGRASL*ARAAGVSTSLR Trigger: CCTAAGTGAGGTGGAGACCCCGGCTGCTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAGCTCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000174684.2 ENSMUST00000180043.8 |
||
| CDS CCA 72 bp | TTTGTAGCCCATGTACATGAGCTCCCGGAGGAGGGGTaGCCGTGCAAGCCTCTGGGCCCGAGCAGCCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FVAHVHELPEEG*PCKPLGPSSRG Trigger: ACCCCGGCTGCTCGGGCCCAGAGGCTTGCACGGCCACCCCTCCTCCGGGAGCTCATGTACATGGGCTACAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000174684.2 ENSMUST00000180043.8 |
||
| CDS CAA 90 bp | CCAGCTGCCAGCCCTCCTGCCGCTCATACGGCGTGGTCAGCAATTTaGTCAGGTGCCCTCTCCATGTCACCGTGGCCCCTGCCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PAASPPAAHTAWSAI*SGALSMSPWPLPAS Trigger: GCTGGCTGGCAGGGGCCACGGTGACATGGAGAGGGCACCTGACAAAATTGCTGACCACGCCGTATGAGCGGCAGGAGGGCTGGCAGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000180043.8 |
||
| CDS CAA 90 bp | GGGGCTGTAGTAGCGGAGGGCTCGGGCATCTCCATGGTACTGGCGTaGTGCGTCCAGGGAGAAGCAGCCCAGTTCGGATGGACGCCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GAVVAEGSGISMVLA*CVQGEAAQFGWTPV Trigger: TACCGGCGTCCATCCGAACTGGGCTGCTTCTCCCTGGACGCACAACGCCAGTACCATGGAGATGCCCGAGCCCTCCGCTACTACAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS CCA 72 bp | GCGTTGTGCGTCCAGGGAGAAGCAGCCCAGTTCGGATaGACGCCGGTAGAACGGGAAGGGTCCCGAGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: ALCVQGEAAQFG*TPVEREGSRVQ Trigger: CTGTACTCGGGACCCTTCCCGTTCTACCGGCGTCCATCCGAACTGGGCTGCTTCTCCCTGGACGCACAACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS GCA 72 bp | TGCCGCTCATACGGCGTGGTCAGCAATTTTGTCAGGTaGCCTCTCCATGTCACCGTGGCCCCTGCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CRSYGVVSNFVR*PLHVTVAPASQ Trigger: CTGGCTGGCAGGGGCCACGGTGACATGGAGAGGGCACCTGACAAAATTGCTGACCACGCCGTATGAGCGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000180043.8 |
||
| CDS CCA 72 bp | TCCAGGACCCAGCGCAGCAAATGGTCCAACCTCTCTTaGACTTCCTCGTCCCGGGGCTGGTATCGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTQRSKWSNLS*TSSSRGWYRSG Trigger: CCCTGACCGATACCAGCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCATTTGCTGCGCTGGGTCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046244.15 ENSMUST00000173063.8 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS CCA 72 bp | AGCTGGTTCCGGTGTTCCAGGACCCAGCGCAGCAAATaGTCCAACCTCTCTTGGACTTCCTCGTCCCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SWFRCSRTQRSK*SNLSWTSSSRG Trigger: GCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCATTTGCTGCGCTGGGTCCTGGAACACCGGAACCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046244.15 ENSMUST00000173063.8 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS CAA 72 bp | AGCCCTCCTGCCGCTCATACGGCGTGGTCAGCAATTTaGTCAGGTGCCCTCTCCATGTCACCGTGGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPPAAHTAWSAI*SGALSMSPWPL Trigger: CAGGGGCCACGGTGACATGGAGAGGGCACCTGACAAAATTGCTGACCACGCCGTATGAGCGGCAGGAGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000180043.8 |
||
| CDS CAA 72 bp | TTCCAGGACCCAGCGCAGCAAATGGTCCAACCTCTCTaGGACTTCCTCGTCCCGGGGCTGGTATCGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FQDPAQQMVQPL*DFLVPGLVSVR Trigger: CCTGACCGATACCAGCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCATTTGCTGCGCTGGGTCCTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000046244.15 ENSMUST00000173063.8 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS CAA 90 bp | GTTCCGGTGTTCCAGGACCCAGCGCAGCAAATGGTCCAACCTCTCTaGGACTTCCTCGTCCCGGGGCTGGTATCGGTCAGGGTATCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VPVFQDPAQQMVQPL*DFLVPGLVSVRVSI Trigger: GATGGATACCCTGACCGATACCAGCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCATTTGCTGCGCTGGGTCCTGGAACACCGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS CAA 72 bp | GGCTGTGTCCGCAGTAAAGGGACTGCCCGGGGGAGTTaGTGCAAAGGCTTTTCCACCTCTGTCTTCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCVRSKGTARGS*CKGFSTSVFSA Trigger: AGCGGAGAAGACAGAGGTGGAAAAGCCTTTGCACAAACTCCCCCGGGCAGTCCCTTTACTGCGGACACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS TCA 72 bp | CGCACATGTACTGCTCAAATTTGTAGCCCATGTACATaGGCTCCCGGAGGAGGGGTGGCCGTGCAAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RTCTAQICSPCT*APGGGVAVQAS Trigger: AGAGGCTTGCACGGCCACCCCTCCTCCGGGAGCTCATGTACATGGGCTACAAATTTGAGCAGTACATGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000174684.2 ENSMUST00000180043.8 |
||
| CDS CCA 72 bp | TGGTCCAACCTCTCTTGGACTTCCTCGTCCCGGGGCTaGTATCGGTCAGGGTATCCATCTCTGAGGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSNLSWTSSSRG*YRSGYPSLRSK Trigger: CTTTGACCTCAGAGATGGATACCCTGACCGATACCAGCCCCGGGACGAGGAAGTCCAAGAGAGGTTGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||
| CDS GCA 72 bp | TGTGTCCGCAGTAAAGGGACTGCCCGGGGGAGTTTGTaGAAAGGCTTTTCCACCTCTGTCTTCTCCGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CVRSKGTARGSL*KGFSTSVFSAF Trigger: AAAAGCGGAGAAGACAGAGGTGGAAAAGCCTTTGCACAAACTCCCCCGGGCAGTCCCTTTACTGCGGACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046244.15 ENSMUST00000173874.8 ENSMUST00000173995.2 ENSMUST00000174092.8 ENSMUST00000180043.8 |
||