Pregenerated sensors for DVL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003233Ensembl transcript IDs: ENSMUST00000003318.13, ENSMUST00000171572.9, ENSMUST00000171774.2
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGAGAGGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTTaGAAGAAGGGTCCAGCCCTCCGGTCAGGGACCAGCCCTGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: RGEGSHGPAPYLGMT*KKGPALRSGTSPEA Trigger: CGCCTCAGGGCTGGTCCCTGACCGGAGGGCTGGACCCTTCTTCCAAGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCCTCTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR TCA 90 bp | GATGACTTGGAAGAAGGGTCCAGCCCTCCGGTCAGGGACCAGCCCTaGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: DDLEEGSSPPVRDQP*GVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTGACCGGAGGGCTGGACCCTTCTTCCAAGTCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 90 bp | GGGTGGGGGTGTAGGAGGGAAGTAGAGAATGGCCTGTCAGTCACCTaGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATCCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: GWGCRREVENGLSVT*TALCGAHLLGFIQV Trigger: TACTTGGATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATTCTCTACTTCCCTCCTACACCCCCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR TCA 90 bp | AAGAGAATGGCTGACACTATCATGGGAGTGGGAAAGGAGGAGATGTaGGCCAAAGACAGGATGACAAGGGTACTGGCGTCCAGCGCACAA | + |
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Preference number: 1 (lower is better) Translates to: KRMADTIMGVGKEEM*AKDRMTRVLASSAQ Trigger: TTGTGCGCTGGACGCCAGTACCCTTGTCATCCTGTCTTTGGCTCACATCTCCTCCTTTCCCACTCCCATGATAGTGTCAGCCATTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR TCA 90 bp | TCTATGTGTACGAGGTGGAGGGAAGCAAACTTCTCTACTTCTCTCTaGGAAGAACAGTCTTACACCTGGGGGAAGCTGAGGTCCTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SMCTRWREANFSTSL*EEQSYTWGKLRSFP Trigger: TGGGAAGGACCTCAGCTTCCCCCAGGTGTAAGACTGTTCTTCTCAGAGAGAAGTAGAGAAGTTTGCTTCCCTCCACCTCGTACACATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTaGGCTTTATCCAAGTACAAAGACATTGGGAACATGTATGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: MACQSPGQPSVEPIF*ALSKYKDIGNMYGK Trigger: CTTCCCATACATGTTCCCAATGTCTTTGTACTTGGATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 90 bp | TCCAGATTTAGAAGTGGCCAGCATATCAACAGCTTAAGAAGAGAATaGCTGACACTATCATGGGAGTGGGAAAGGAGGAGATGTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: SRFRSGQHINSLRRE*LTLSWEWERRRCEP Trigger: TGGCTCACATCTCCTCCTTTCCCACTCCCATGATAGTGTCAGCCATTCTCTTCTTAAGCTGTTGATATGCTGGCCACTTCTAAATCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR GCA 90 bp | AACAATTTTCAAAATAACTGGAGCTGTTTGGAAGTCCCAGTTGTCTaGTTAAGCTCCAACTGGCCTGTGTTCCCAGGTCTCATGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: NNFQNNWSCLEVPVV*LSSNWPVFPGLMEK Trigger: CTTCTCCATGAGACCTGGGAACACAGGCCAGTTGGAGCTTAAGCAGACAACTGGGACTTCCAAACAGCTCCAGTTATTTTGAAAATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGGTTGGACATCCTTaGGAAGCCCTGAGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: QGPALRRVCVCVCVCVCVRVGHP*EALRGC Trigger: GCAGCCCCTCAGGGCTTCCCAAGGATGTCCAACCCT...CACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTAGTCAGGGACCAGCCCTaGGGCGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: MACQSPGQPSVEPIFWALVRDQP*GVCVCV Trigger: CACACACACACACACGCCTCAGGGCTGGTCCCTGAC...TAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | AATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTTGTGGGTGTGAGGGTTaGACATCCTTGGGAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: NGLSVTWTALCGAHLLGFCGCEG*TSLGSP Trigger: AGGGCTTCCCAAGGATGTCCAACCCTCACACCCACA...AAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGATGCTGGGCCTGTCAGTCACCTaGACAGCCCTCTGTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GEEQLNFRVSRVEGCVMLGLSVT*TALCGA Trigger: GGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCC...CAGCATCACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATGTGTACGAGGTaGAGGGAAGCAAACTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QGPALRRVCVCVCVCVCVSMCTR*REANFS Trigger: AGAGAAGTTTGCTTCCCTCCACCTCGTACACATAGA...CACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCCTTGTAGTGTGGGTGTaGGGGTTGGACATCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: KERGSWGWRSRFRSGQHILVVWV*GLDILG Trigger: CCCAAGGATGTCCAACCCTCACACCCACACTACAAG...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCGAGCCAAAGACAGGATaGCAAGGGTACTGGCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KERGSWGWRSRFRSGQHIEPKTG*QGYWRP Trigger: TGGACGCCAGTACCCTTGTCATCCTGTCTTTGGCTC...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGATGCTGCTGGACAGCCCTCTGTaGAGCCCATCTTTTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GEEQLNFRVSRVEGCVMLLDSPL*SPSFGL Trigger: AAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAG...CAGCATCACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCTGCTTAAGCTCCAACTaGCCTGTGTTCCCAGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KERGSWGWRSRFRSGQHICLSSN*PVFPGL Trigger: GAGACCTGGGAACACAGGCCAGTTGGAGCTTAAGCA...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | AAAATGAGAGCTGGAATTCAAGCCCAAACCAACTTGACTCCAAATCCCATGCTCATAAGGATATGGGGGTaGGGTGGGGGTGTAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KMRAGIQAQTNLTPNPMLIRIWG*GGGVGG Trigger: CCCTCCTACACCCCCACCCCACCCCCATATCCTTAT...GAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CAA 90 bp | CCTCTGTGGAGCCCATCTTTTGGGCTTTATCCAAGTACAAAGACATaGGGAACATGTATGGGAAGCGTAAGGGCTAGCAGGAAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PLWSPSFGLYPSTKT*GTCMGSVRASRKRR Trigger: TCTCCTCTTCCTGCTAGCCCTTACGCTTCCCATACATGTTCCCAATGTCTTTGTACTTGGATAAAGCCCAAAAGATGGGCTCCACAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CAA 90 bp | AATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTaGGGCTTTATCCAAGTACAAAGACATTGGGAACATGTATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: NGLSVTWTALCGAHL*GFIQVQRHWEHVWE Trigger: TTCCCATACATGTTCCCAATGTCTTTGTACTTGGATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGGGGTGCAGCCGGCTaGGAGGTAAGAGCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGGAAG*EVRAGE Trigger: CTCTCCAGCTCTTACCTCTCAGCCGGCTGCACCCCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
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| 3UTR-3UTR CCA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGAACAGTCTTACACCTaGGGGAAGCTGAGGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: MLCKLRKGEEQLNFRVSREQSYT*GKLRSF Trigger: GAAGGACCTCAGCTTCCCCCAGGTGTAAGACTGTTC...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCAGAGTTAGAGAGAACCGAAGACAGCTAAGATCAAATCATGCTTCTAACAAACGGATGAATGAATaGCAAAACAGCCCTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: KGRVRENRRQLRSNHASNKRMNE*QNSPTS Trigger: TGAAGTAGGGCTGTTTTGCCATTCATTCATCCGTTT...GTTAGAAGCATGATTTGATCTTAGCTGTCTTCGGTTCTCTCTAACTCTGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCAGAGTTAGAGAGAACCGAAGACAGCTAAGATCAAATCATGCTTCTAACGTCTCATGGAGAAGATaGAAACAGAACAGTTATAAG | + |
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Preference number: 2 (lower is better) Translates to: KGRVRENRRQLRSNHASNVSWRR*KQNSYK Trigger: CTTATAACTGTTCTGTTTTCATCTTCTCCATGAGAC...GTTAGAAGCATGATTTGATCTTAGCTGTCTTCGGTTCTCTCTAACTCTGCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCAGAGTTAGAGAGAACCGAAGACAGCTAAGATCAAATCATGCTTCTAACAATTTTCAAAATAACTaGAGCTGTTTGGAAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KGRVRENRRQLRSNHASNNFQNN*SCLEVP Trigger: TGGGACTTCCAAACAGCTCCAGTTATTTTGAAAATT...GTTAGAAGCATGATTTGATCTTAGCTGTCTTCGGTTCTCTCTAACTCTGCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 72 bp | GGCAGTCACGGACCAGCCCCATATCTAGGGATGACTTaGAAGAAGGGTCCAGCCCTCCGGTCAGGGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: GSHGPAPYLGMT*KKGPALRSGTS Trigger: GCTGGTCCCTGACCGGAGGGCTGGACCCTTCTTCCAAGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR TCA 72 bp | GAAGAAGGGTCCAGCCCTCCGGTCAGGGACCAGCCCTaGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: EEGSSPPVRDQP*GVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTGACCGGAGGGCTGGACCCTTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCGAGGGTTGGACATCCTaGGGAAGCCCTGAGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: KERGSWGWRSRFRSGQHIEGWTS*GSPEGL Trigger: CAGCCCCTCAGGGCTTCCCAAGGATGTCCAACCCTC...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR TCA 72 bp | GCTGACACTATCATGGGAGTGGGAAAGGAGGAGATGTaGGCCAAAGACAGGATGACAAGGGTACTGGCGTCC | + |
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Preference number: 3 (lower is better) Translates to: ADTIMGVGKEEM*AKDRMTRVLAS Trigger: GGACGCCAGTACCCTTGTCATCCTGTCTTTGGCTCACATCTCCTCCTTTCCCACTCCCATGATAGTGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 72 bp | TGTAGGAGGGAAGTAGAGAATGGCCTGTCAGTCACCTaGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: CRREVENGLSVT*TALCGAHLLGF Trigger: AAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATTCTCTACTTCCCTCCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR TCA 72 bp | CTCTCTGAGAAGAACAGTCTTACACCTGGGGGAAGCTaGGGTCCTTCCCAGAAGCCTAGTGACCTTGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: LSEKNSLTPGGS*GPSQKPSDLVV Trigger: CACTACAAGGTCACTAGGCTTCTGGGAAGGACCTCAGCTTCCCCCAGGTGTAAGACTGTTCTTCTCAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR GCA 72 bp | CGGATGAATGAATGGCAAAACAGCCCTACTTCAAGTTaGCCCCAAACCTGGACTAAGGACATCCTGATGGGG | + |
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Preference number: 3 (lower is better) Translates to: RMNEWQNSPTSS*PQTWTKDILMG Trigger: CCCCATCAGGATGTCCTTAGTCCAGGTTTGGGGGCAACTTGAAGTAGGGCTGTTTTGCCATTCATTCATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 72 bp | AGAGAATGGCCTGTCAGTCACCTGGACAGCCCTCTGTaGAGCCCATCTTTTGGGCTTTATCCAAGTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: REWPVSHLDSPL*SPSFGLYPSTK Trigger: CTTTGTACTTGGATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR GCA 72 bp | CAAAATAACTGGAGCTGTTTGGAAGTCCCAGTTGTCTaGTTAAGCTCCAACTGGCCTGTGTTCCCAGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QNNWSCLEVPVV*LSSNWPVFPGL Trigger: GAGACCTGGGAACACAGGCCAGTTGGAGCTTAAGCAGACAACTGGGACTTCCAAACAGCTCCAGTTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 72 bp | TGTTTGGAAGTCCCAGTTGTCTGCTTAAGCTCCAACTaGCCTGTGTTCCCAGGTCTCATGGAGAAGATGAAA | + |
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Preference number: 3 (lower is better) Translates to: CLEVPVVCLSSN*PVFPGLMEKMK Trigger: TTTCATCTTCTCCATGAGACCTGGGAACACAGGCCAGTTGGAGCTTAAGCAGACAACTGGGACTTCCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGAATAACTGGAGCTGTTaGGAAGTCCCAGTTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: RKGEEQLNFRVSRVEGCVNNWSC*EVPVVC Trigger: GCAGACAACTGGGACTTCCAAACAGCTCCAGTTATT...CACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 72 bp | AGAAGTGGCCAGCATATCAACAGCTTAAGAAGAGAATaGCTGACACTATCATGGGAGTGGGAAAGGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: RSGQHINSLRRE*LTLSWEWERRR Trigger: TCTCCTCCTTTCCCACTCCCATGATAGTGTCAGCCATTCTCTTCTTAAGCTGTTGATATGCTGGCCACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 72 bp | GTGGGTAATAAAAACAGGTCTAAAGAGAGGGGAAGCTaGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: VGNKNRSKERGS*GWRSRFRSGQH Trigger: ATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTTAGACCTGTTTTTATTACCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CCA 72 bp | ATCAACAGCTTAAGAAGAGAATGGCTGACACTATCATaGGAGTGGGAAAGGAGGAGATGTGAGCCAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: INSLRREWLTLS*EWERRRCEPKT Trigger: TGTCTTTGGCTCACATCTCCTCCTTTCCCACTCCCATGATAGTGTCAGCCATTCTCTTCTTAAGCTGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAATATCTAGGGATGACTaGGAAGAAGGGTCCAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRISRDD*EEGSSP Trigger: AGGGCTGGACCCTTCTTCCAAGTCATCCCTAGATAT...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR TCA 72 bp | ACTACAGAGCTATGTTCCCAGCTGACACCCTTGCCCTaGAGAGTTAAGAGTCTGGATAAGTCAGAGTTTATA | + |
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Preference number: 3 (lower is better) Translates to: TTELCSQLTPLP*RVKSLDKSEFI Trigger: TATAAACTCTGACTTATCCAGACTCTTAACTCTTCAGGGCAAGGGTGTCAGCTGGGAACATAGCTCTGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CCA 90 bp | CTAGCAGGAAGAGGAGAGGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTCTCCTGGGGGACCCATaGCTGCCGGCGGCGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LAGRGEGSHGPAPYLGMTLLGDP*LPAAGS Trigger: TGACCCCGCCGCCGGCAGCCATGGGTCCCCCAGGAG...AGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCCTCTCCTCTTCCTGCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CCA 90 bp | CAGGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGGCTGTGCTCGCTaGCCGCTGGGCCTGATCGCT | + |
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Preference number: 4 (lower is better) Translates to: QGPALRRVCVCVCVCVCVGGCAR*PLGLIA Trigger: AGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACC...CACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CCA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTAGGCCAGGTCACGCCCTaGAGGGGCTCCTGGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: MACQSPGQPSVEPIFWALGQVTP*RGSWGT Trigger: GGTCCCCCAGGAGCCCCTCCAGGGCGTGACCTGGCC...TAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR GCA 90 bp | CAGGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGACTGCTGGCGCTaGCCCCACCGTAGCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QGPALRRVCVCVCVCVCVADCWR*PHRSCS Trigger: GCTACAGCTACGGTGGGGGCAGCGCCAGCAGTCAGC...CACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| 3UTR CAA 72 bp | GGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTaGGAAGAAGGGTCCAGCCCTCCGGTCAGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: GQSRTSPISRDD*EEGSSPPVRDQ Trigger: CTGGTCCCTGACCGGAGGGCTGGACCCTTCTTCCAAGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR TCA 90 bp | CTAGCAGGAAGAGGAGAGGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTCTGCCTTCACTGTGCTaGCTGCTGGCGCTGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LAGRGEGSHGPAPYLGMTLPSLC*LLALPP Trigger: TGGGGGCAGCGCCAGCAGTCAGCACAGTGAAGGCAG...AGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCCTCTCCTCTTCCTGCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CCA 90 bp | GGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATCCGGGGCCGCTCTCGTTaGGCAGACACCAAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLSVTWTALCGAHLLGFIRGRSR*ADTKES Trigger: CGACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCG...GATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | AATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTGGGGCAGCTCCTGGGTaGGGCAAAGGAGCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NGLSVTWTALCGAHLLGFGAAPG*GKGASV Trigger: CACACTGGCTCCTTTGCCGCACCCAGGAGCTGCCCC...AAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | GGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGAAGGTGCCTGTCATaGCTGCCGTGTGAGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GTSPEACVCVCVCVCVCVGRCLS*LPCERP Trigger: GGGTCTCTCACACGGCAGCCATGACAGGCACCTTCC...CACACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCAGGAAGAGGAGAGGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTCGCTGCCACTTCGGTTaGAGCCACTGCTCCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGRGEGSHGPAPYLGMTRCHFG*SHCSDC Trigger: GCAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCG...AGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCCTCTCCTCTTCCTGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | GGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATCGCTGCCGCTACCACCTaGCTTGGAGTCCCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLSVTWTALCGAHLLGFIAAATT*LGVPSF Trigger: AAAGCTGGGGACTCCAAGTCAGGTGGTAGCGGCAGC...GATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | GGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATCCGAAGGTGGCAGCTCTaGCGGGTTGTCAGCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSVTWTALCGAHLLGFIRRWQL*RVVSTE Trigger: TTCTGTGCTGACAACCCGTCAGAGCTGCCACCTTCG...GATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTAGGAGTCCCCAGCTTTTaGGTCCTTCTCCTTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MACQSPGQPSVEPIFWALGVPSF*VLLLAP Trigger: CGGCGCAAGGAGAAGGACCCAAAAGCTGGGGACTCC...TAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGGAAGAGGAGAGGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTGAGCCATCATGGTCGTaGAGCGATAGGTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAGRGEGSHGPAPYLGMTEPSWS*SDRLAM Trigger: CATGGCCAACCTATCGCTTCACGACCATGATGGCTC...AGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCCTCTCCTCTTCCTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCTGTTTGGAAGTCCCAGTTGTCTGCTTAAGCTCCAACTGGCCTGTGTTGGTGCCTGTCATGGCTaGCGTGTGAGAGACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LELFGSPSCLLKLQLACVGACHG*RVRDPG Trigger: GCCTGGGTCTCTCACACGGCAGCCATGACAGGCACC...AACACAGGCCAGTTGGAGCTTAAGCAGACAACTGGGACTTCCAAACAGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATTAAGGAGGGGCTCATaGCATAGGCGGGGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MACQSPGQPSVEPIFWALLRRGS*HRRGRC Trigger: GCACCTTCCCCGCCTATGGCATGAGCCCCTCCTTAA...TAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCCCAAGGGGCAGCTCCTaGGTGCGGCAAAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KERGSWGWRSRFRSGQHIPRGSS*VRQRSQ Trigger: CTGGCTCCTTTGCCGCACCCAGGAGCTGCCCCTTGG...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCAGGAAGAGGAGAGGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTGTAGGGATGCGGAGGTaGTGGGTACTGGTAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAGRGEGSHGPAPYLGMTVGMRR*WVLVRE Trigger: TTCCCTTACCAGTACCCACCACCTCCGCATCCCTAC...AGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCCTCTCCTCTTCCTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AAAATGAGAGCTGGAATTCAAGCCCAAACCAACTTGACTCCAAATCCCATGCTCCCCTGGAGGGGCTCCTaGGGGACCCATGGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KMRAGIQAQTNLTPNPMLPWRGS*GTHGCR Trigger: CCGGCAGCCATGGGTCCCCCAGGAGCCCCTCCAGGG...GAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | AATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTGCTTGTGTCTTCTCATaGGGCGTGAGGCACTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGLSVTWTALCGAHLLGFACVFS*GVRHCS Trigger: AGAGCAGTGCCTCACGCCTCATGAGAAGACACAAGC...AAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCTGCGGAAGGACTGTCTaGTGGCCGTCAGTTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KERGSWGWRSRFRSGQHICGRTV*WPSVPG Trigger: CCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCA...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCGGAGCCAGTGTGTCCTaGTCAGAGGCGCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KERGSWGWRSRFRSGQHIGASVS*SEAPLE Trigger: CTCCAGTGGCGCCTCTGACCAGGACACACTGGCTCC...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCGGAAGGACTGTCTGCTaGCCGTCAGTTCCGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KERGSWGWRSRFRSGQHIGRTVC*PSVPGA Trigger: TGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCC...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATCGCCCGAAATTCTTGGTaGGGTTTCCCATTGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSVTWTALCGAHLLGFIARNSW*GFPLPC Trigger: GCATGGCAATGGGAAACCCCACCAAGAATTTCGGGC...GATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTAGAAGAACTTATAGCTaGGCCGCTGCAGAACGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NGLSVTWTALCGAHLLGFRRTYS*AAAERP Trigger: AGGGCGTTCTGCAGCGGCCCAGCTATAAGTTCTTCT...AAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATCCTGTGGATGGAGAGGTaGAAATCATCTAGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLSVTWTALCGAHLLGFILWMER*KSSRRS Trigger: AGAGCGCCTAGATGATTTCCACCTCTCCATCCACAG...GATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCTGTTTGGAAGTCCCAGTTGTCTGCTTAAGCTCCAACTGGCCTGTGTTGCTGTAGCCCAGTTCTaGGAAGCCTGGGTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LELFGSPSCLLKLQLACVAVAQF*EAWVWV Trigger: AACCCACACCCAGGCTTCCCAGAACTGGGCTACAGC...AACACAGGCCAGTTGGAGCTTAAGCAGACAACTGGGACTTCCAAACAGCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGCTTGGGTGTGTGTGGTaGCTGCGCAGGCTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGEEQLNFRVSRVEGCVLGCVW*LRRLLV Trigger: GACCAGCAGCCTGCGCAGCCACCACACACACCCAAG...CACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGAGGGGGCACTCCGGGTaGGCCATAGCTTGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKGEEQLNFRVSRVEGCVRGHSG*AIAWVC Trigger: ACACACCCAAGCTATGGCCCACCCGGAGTGCCCCCT...CACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGATGCTGACACCACCCGGCCATTaGAGCAGGGTAGCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEEQLNFRVSRVEGCVMLTPPGH*SRVAWH Trigger: ATGCCAAGCTACCCTGCTTCAATGGCCGGGTGGTGT...CAGCATCACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCTGTTTGGAAGTCCCAGTTGTCTGCTTAAGCTCCAACTGGCCTGTGTTTTCGGTTGGAGCCACTaGTCCGACTGCCTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LELFGSPSCLLKLQLACVFGWSH*SDCLHC Trigger: ACAGTGAAGGCAGTCGGAGCAGTGGCTCCAACCGAA...AACACAGGCCAGTTGGAGCTTAAGCAGACAACTGGGACTTCCAAACAGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCTGTTTGGAAGTCCCAGTTGTCTGCTTAAGCTCCAACTGGCCTGTGTTGGTTTCCCATTGCCATaGGGAAGGACTGTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LELFGSPSCLLKLQLACVGFPLP*GRTVCW Trigger: CCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACC...AACACAGGCCAGTTGGAGCTTAAGCAGACAACTGGGACTTCCAAACAGCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCACTCAGGGGAGGCCATaGCTTTTACGATGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KERGSWGWRSRFRSGQHITQGRP*LLRWPP Trigger: TGGCGGCCATCGTAAAAGCCATGGCCTCCCCTGAGT...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGATGGTGCCCGCTCCCGTaGCCCCCTCAGACTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRWCPLP*PPQTAA Trigger: CGCAGCAGTCTGAGGGGGCCACGGGAGCGGGCACCA...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGGGTCAGAGGCGCCACTaGAGCCATCATGGTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKGEEQLNFRVSRVEGCVGQRRH*SHHGRE Trigger: TTCACGACCATGATGGCTCCAGTGGCGCCTCTGACC...CACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | AAAATGAGAGCTGGAATTCAAGCCCAAACCAACTTGACTCCAAATCCCATGCTCGGGTGGGCCATAGCTTaGGTGTGTGTGGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KMRAGIQAQTNLTPNPMLGWAIA*VCVVAA Trigger: CGCAGCCACCACACACACCCAAGCTATGGCCCACCC...GAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | GGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATGTTCTCGAAGTTaGTCTCATTTACCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTSPEACVCVCVCVCVCVSCSRS*SHLPAV Trigger: TACTGCAGGTAAATGAGATCAACTTCGAGAACATGA...CACACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGATCGGACCTCCAACCCTaGCTCAGGGGAGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRSDLQP*LRGGHG Trigger: GCCATGGCCTCCCCTGAGTCAGGGTTGGAGGTCCGA...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | AAAATGAGAGCTGGAATTCAAGCCCAAACCAACTTGACTCCAAATCCCATGCTCCATAGGCGGGGAAGGTaGCTGTCATGGCTGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KMRAGIQAQTNLTPNPMLHRRGR*LSWLPC Trigger: ACACGGCAGCCATGACAGGCACCTTCCCCGCCTATG...GAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCTCCTGGGGGACCCATaGCTGCCGGCGGCGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLLGDP*LPAAGS Trigger: TGACCCCGCCGCCGGCAGCCATGGGTCCCCCAGGAG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCCCTGGAGGGGCTCCTaGGGGACCCATGGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFPWRGS*GTHGCR Trigger: CCGGCAGCCATGGGTCCCCCAGGAGCCCCTCCAGGG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGCCAGGTCACGCCCTaGAGGGGCTCCTGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGQVTP*RGSWGT Trigger: GGTCCCCCAGGAGCCCCTCCAGGGCGTGACCTGGCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | AAAATGAGAGCTGGAATTCAAGCCCAAACCAACTTGACTCCAAATCCCATGCTCCCCCAATGCCTCCTGTaGGTTCCATCGAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KMRAGIQAQTNLTPNPMLPQCLL*VPSKVA Trigger: TGCCACCTTCGATGGAACGCACAGGAGGCATTGGGG...GAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATTGATCTCATTTACCTaGAGTAGCATATCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MACQSPGQPSVEPIFWALLISFT*SSISPG Trigger: GCCAGGAGATATGCTACTGCAGGTAAATGAGATCAA...TAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTGGTGCCCGCTCCCGTaGCCCCCTCAGACTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFWCPLP*PPQTAA Trigger: CGCAGCAGTCTGAGGGGGCCACGGGAGCGGGCACCA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGATGCTGAGAGCCCGAAATTCTTaGTGGGGTTTCCCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEEQLNFRVSRVEGCVMLRARNS*WGFPLP Trigger: TGGCAATGGGAAACCCCACCAAGAATTTCGGGCTCT...CAGCATCACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | TGTATGTATATATCTATGTGTACGAGGTGGAGGGAAGCAAACTTCTCTACTTCTCTGGTCAGCGAATGGTaGCTGCGGTGGCTGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CMYISMCTRWREANFSTSLVSEW*LRWLCS Trigger: CGAGCACAGCCACCGCAGTCACCATTCGCTGACCAG...AGAAGTAGAGAAGTTTGCTTCCCTCCACCTCGTACACATAGATATATACATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGATTGGGTCCTTCTCCTTaGGCCGGTCGCTGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRLGPSP*AGRCHF Trigger: GAAGTGGCAGCGACCGGCGCAAGGAGAAGGACCCAA...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | TGTATGTATATATCTATGTGTACGAGGTGGAGGGAAGCAAACTTCTCTACTTCTGCAGCCGCGAGGACTTaGGTCCCAGCACTTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CMYISMCTRWREANFSTSAAART*VPALGY Trigger: GTAGCCAAGTGCTGGGACCCAAGTCCTCGCGGCTGC...AGAAGTAGAGAAGTTTGCTTCCCTCCACCTCGTACACATAGATATATACATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGTGGCTGTGCTCGCTaGCCGCTGGGCCTGATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGGCAR*PLGLIA Trigger: AGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTCGGACCTCCAACCCTaGCTCAGGGGAGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFSDLQP*LRGGHG Trigger: GCCATGGCCTCCCCTGAGTCAGGGTTGGAGGTCCGA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCTGCCTTCACTGTGCTaGCTGCTGGCGCTGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLPSLC*LLALPP Trigger: TGGGGGCAGCGCCAGCAGTCAGCACAGTGAAGGCAG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGGGCAGCTCCTGGGTaGGGCAAAGGAGCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGAAPG*GKGASV Trigger: CACACTGGCTCCTTTGCCGCACCCAGGAGCTGCCCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGCTGACTGCTGGCGCTaGCCCCACCGTAGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFADCWR*PHRSCS Trigger: GCTACAGCTACGGTGGGGGCAGCGCCAGCAGTCAGC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCGGGGCCGCTCTCGTTaGGCAGACACCAAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFRGRSR*ADTKES Trigger: CGACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | AAAATGAGAGCTGGAATTCAAGCCCAAACCAACTTGACTCCAAATCCCATGCTCGCCGCCATGTCACTGTaGATGGAGAGGTGGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KMRAGIQAQTNLTPNPMLAAMSL*MERWKS Trigger: TGATTTCCACCTCTCCATCCACAGTGACATGGCGGC...GAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCCAAGGGGCAGCTCCTaGGTGCGGCAAAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFPRGSS*VRQRSQ Trigger: CTGGCTCCTTTGCCGCACCCAGGAGCTGCCCCTTGG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGACTGCTGCGTGTAGTGTaGTCTGACTCGCTGCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRLLRVV*SDSLPL Trigger: TAGCGGCAGCGAGTCAGACCACACTACACGCAGCAG...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCTGGTCAGCGAATGGTaGCTGCGGTGGCTGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLVSEW*LRWLCS Trigger: CGAGCACAGCCACCGCAGTCACCATTCGCTGACCAG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | TGTATGTATATATCTATGTGTACGAGGTGGAGGGAAGCAAACTTCTCTACTTCTGTGAGAGACCCAGGCTaGAGGGTCAATGGGACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CMYISMCTRWREANFSTSVRDPG*RVNGTD Trigger: ATCCGTCCCATTGACCCTGCAGCCTGGGTCTCTCAC...AGAAGTAGAGAAGTTTGCTTCCCTCCACCTCGTACACATAGATATATACATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGTGCCTGTCATGGCTaGCGTGTGAGAGACCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGACHG*RVRDPG Trigger: GCCTGGGTCTCTCACACGGCAGCCATGACAGGCACC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTGCGGAAGGACTGTCTaGTGGCCGTCAGTTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFCGRTV*WPSVPG Trigger: CCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGGTGGGGTTTCCCATTaGCATGCGGAAGGACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRGGVSH*HAEGLS Trigger: AGACAGTCCTTCCGCATGGCAATGGGAAACCCCACC...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGCAGCCGCGAGGACTTaGGTCCCAGCACTTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFAAART*VPALGY Trigger: GTAGCCAAGTGCTGGGACCCAAGTCCTCGCGGCTGC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGAGCCAGTGTGTCCTaGTCAGAGGCGCCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGASVS*SEAPLE Trigger: CTCCAGTGGCGCCTCTGACCAGGACACACTGGCTCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCGCTGCCACTTCGGTTaGAGCCACTGCTCCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFRCHFG*SHCSDC Trigger: GCAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCTTGGGTGTGTGTGGTaGCTGCGCAGGCTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLGCVW*LRRLLV Trigger: GACCAGCAGCCTGCGCAGCCACCACACACACCCAAG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGGTGGGCCATAGCTTaGGTGTGTGTGGTGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGWAIA*VCVVAA Trigger: CGCAGCCACCACACACACCCAAGCTATGGCCCACCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTAGGGGGCACTCCGGGTaGGCCATAGCTTGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFRGHSG*AIAWVC Trigger: ACACACCCAAGCTATGGCCCACCCGGAGTGCCCCCT...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGAAGGACTGTCTGCTaGCCGTCAGTTCCGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGRTVC*PSVPGA Trigger: TGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| 3UTR CAA 72 bp | AGCCCATCTTTTGGGCTTTATCCAAGTACAAAGACATaGGGAACATGTATGGGAAGCGTAAGGGCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSFGLYPSTKT*GTCMGSVRASR Trigger: CCTGCTAGCCCTTACGCTTCCCATACATGTTCCCAATGTCTTTGTACTTGGATAAAGCCCAAAAGATGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGCTGCCGCTACCACCTaGCTTGGAGTCCCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFAAATT*LGVPSF Trigger: AAAGCTGGGGACTCCAAGTCAGGTGGTAGCGGCAGC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCATAGGCGGGGAAGGTaGCTGTCATGGCTGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFHRRGR*LSWLPC Trigger: ACACGGCAGCCATGACAGGCACCTTCCCCGCCTATG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTTGGGTCCTTCTCCTTaGGCCGGTCGCTGCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLGPSP*AGRCHF Trigger: GAAGTGGCAGCGACCGGCGCAAGGAGAAGGACCCAA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGAAGGTGCCTGTCATaGCTGCCGTGTGAGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGRCLS*LPCERP Trigger: GGGTCTCTCACACGGCAGCCATGACAGGCACCTTCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGAGTCCCCAGCTTTTaGGTCCTTCTCCTTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGVPSF*VLLLAP Trigger: CGGCGCAAGGAGAAGGACCCAAAAGCTGGGGACTCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTACACCACCCGGCCATTaGAGCAGGGTAGCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFTPPGH*SRVAWH Trigger: ATGCCAAGCTACCCTGCTTCAATGGCCGGGTGGTGT...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCGAAGGTGGCAGCTCTaGCGGGTTGTCAGCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFRRWQL*RVVSTE Trigger: TTCTGTGCTGACAACCCGTCAGAGCTGCCACCTTCG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCCCCAATGCCTCCTGTaGGTTCCATCGAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFPQCLL*VPSKVA Trigger: TGCCACCTTCGATGGAACGCACAGGAGGCATTGGGG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGTGAGAGACCCAGGCTaGAGGGTCAATGGGACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFVRDPG*RVNGTD Trigger: ATCCGTCCCATTGACCCTGCAGCCTGGGTCTCTCAC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTTAAGGAGGGGCTCATaGCATAGGCGGGGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLRRGS*HRRGRC Trigger: GCACCTTCCCCGCCTATGGCATGAGCCCCTCCTTAA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTACTCAGGGGAGGCCATaGCTTTTACGATGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFTQGRP*LLRWPP Trigger: TGGCGGCCATCGTAAAAGCCATGGCCTCCCCTGAGT...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGTCAGAGGCGCCACTaGAGCCATCATGGTCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGQRRH*SHHGRE Trigger: TTCACGACCATGATGGCTCCAGTGGCGCCTCTGACC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGCTGTAGCCCAGTTCTaGGAAGCCTGGGTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFAVAQF*EAWVWV Trigger: AACCCACACCCAGGCTTCCCAGAACTGGGCTACAGC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCTGCTGCGTGTAGTGTaGTCTGACTCGCTGCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLLRVV*SDSLPL Trigger: TAGCGGCAGCGAGTCAGACCACACTACACGCAGCAG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGCTTGTGTCTTCTCATaGGGCGTGAGGCACTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFACVFS*GVRHCS Trigger: AGAGCAGTGCCTCACGCCTCATGAGAAGACACAAGC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGAGCCATCATGGTCGTaGAGCGATAGGTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFEPSWS*SDRLAM Trigger: CATGGCCAACCTATCGCTTCACGACCATGATGGCTC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | TGTATGTATATATCTATGTGTACGAGGTGGAGGGAAGCAAACTTCTCTACTTCTCATCACCTCGCTCATTaGTTTGGCCCACAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CMYISMCTRWREANFSTSHHLAH*FGPQWR Trigger: TCTCCATTGTGGGCCAAAGCAATGAGCGAGGTGATG...AGAAGTAGAGAAGTTTGCTTCCCTCCACCTCGTACACATAGATATATACATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTTCGGTTGGAGCCACTaGTCCGACTGCCTTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFFGWSH*SDCLHC Trigger: ACAGTGAAGGCAGTCGGAGCAGTGGCTCCAACCGAA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGTTTCCCATTGCCATaGGGAAGGACTGTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGFPLP*GRTVCW Trigger: CCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGTAGGGATGCGGAGGTaGTGGGTACTGGTAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFVGMRR*WVLVRE Trigger: TTCCCTTACCAGTACCCACCACCTCCGCATCCCTAC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGTTCTGTGGAGCTGCTaGACCTGCTGGTGGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFVLWSC*TCWWNH Trigger: ATGATTCCACCAGCAGGTTCAGCAGCTCCACAGAAC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTATCTCCTGGCTCAATaGGTCCATCAGCTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFYLLAQ*VHQLPQ Trigger: CTGTGGCAGCTGATGGACGCATTGAGCCAGGAGATA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTACTGGGGTTTCCCATTaGCATGCGGAAGGACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFTGVSH*HAEGLS Trigger: AGACAGTCCTTCCGCATGGCAATGGGAAACCCCAGT...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTAGAAGAACTTATAGCTaGGCCGCTGCAGAACGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFRRTYS*AAAERP Trigger: AGGGCGTTCTGCAGCGGCCCAGCTATAAGTTCTTCT...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGCCGCCATGTCACTGTaGATGGAGAGGTGGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFAAMSL*MERWKS Trigger: TGATTTCCACCTCTCCATCCACAGTGACATGGCGGC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CCA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAATCTTGTTGACGGTATaGCGGATGAAACCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRILLTV*RMKPAF Trigger: GAAAGCTGGTTTCATCCGCCATACCGTCAACAAGAT...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCATCACCTCGCTCATTaGTTTGGCCCACAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFHHLAH*FGPQWR Trigger: TCTCCATTGTGGGCCAAAGCAATGAGCGAGGTGATG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
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| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCTGTGGATGGAGAGGTaGAAATCATCTAGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLWMER*KSSRRS Trigger: AGAGCGCCTAGATGATTTCCACCTCTCCATCCACAG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
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| 3UTR CAA 72 bp | CCAAAAATGAGAGCTGGAATTCAAGCCCAAACCAACTaGACTCCAAATCCCATGCTCTGTAAATTAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKMRAGIQAQTN*TPNPMLCKLRK Trigger: CTTTCTTAATTTACAGAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTGCTTTGGCCCACAATaGAGATGCCCAAGAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFCFGPQ*RCPRSY Trigger: ATAACTTCTTGGGCATCTCCATTGTGGGCCAAAGCA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
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| CDS-3UTR CCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTATCTTGTTGACGGTATaGCGGATGAAACCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFILLTV*RMKPAF Trigger: GAAAGCTGGTTTCATCCGCCATACCGTCAACAAGAT...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
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| CDS-3UTR GCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTTGATCTCATTTACCTaGAGTAGCATATCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLISFT*SSISPG Trigger: GCCAGGAGATATGCTACTGCAGGTAAATGAGATCAA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
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| CDS-3UTR TCA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTCATGTTCTCGAAGTTaGTCTCATTTACCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFSCSRS*SHLPAV Trigger: TACTGCAGGTAAATGAGATCAACTTCGAGAACATGA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
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| CDS CCA 90 bp | GCAGGCTGCTGGTCAGCGAATGGTGACTGCGGTGGCTGTGCTCGCTaGCCGCTGGGCCTGATCGCTCGCTTGGTGCCCGCTCCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGCWSANGDCGGCAR*PLGLIARLVPAPVA Trigger: GGCCACGGGAGCGGGCACCAAGCGAGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS TCA 90 bp | CATAGCCGCCTGGCTCCCGTCGCCGCTCACCCTTTGTGGTTCCATTaGGTCGGGCTGCGTGCTCCGGGCCATCCCTCCGTCGGGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSRLAPVAAHPLWFH*VGLRAPGHPSVGAA Trigger: AGCGGCCCCGACGGAGGGATGGCCCGGAGCACGCAGCCCGACTCAATGGAACCACAAAGGGTGAGCGGCGACGGGAGCCAGGCGGCTATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS TCA 90 bp | CAGCGAATGGTGACTGCGGTGGCTGTGCTCGCTGGCCGCTGGGCCTaGTCGCTCGCTTGGTGCCCGCTCCCGTGGCCCCCTCAGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRMVTAVAVLAGRWA*SLAWCPLPWPPQTA Trigger: AGCAGTCTGAGGGGGCCACGGGAGCGGGCACCAAGCGAGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | TGGCTCCCGTCGCCGCTCACCCTTTGTGGTTCCATTGAGTCGGGCTaGGTGCTCCGGGCCATCCCTCCGTCGGGGCCGCTCTCGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WLPSPLTLCGSIESG*VLRAIPPSGPLSLG Trigger: GCCCAACGAGAGCGGCCCCGACGGAGGGATGGCCCGGAGCACGCAGCCCGACTCAATGGAACCACAAAGGGTGAGCGGCGACGGGAGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | TCCCGTCGCCGCTCACCCTTTGTGGTTCCATTGAGTCGGGCTGCGTaGTCCGGGCCATCCCTCCGTCGGGGCCGCTCTCGTTGGGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRRRSPFVVPLSRAA*SGPSLRRGRSRWAD Trigger: GTCTGCCCAACGAGAGCGGCCCCGACGGAGGGATGGCCCGGAGCACGCAGCCCGACTCAATGGAACCACAAAGGGTGAGCGGCGACGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS TCA 90 bp | CTTGGGTGTGTGTGGTGGCTGCGCAGGCTGCTGGTCAGCGAATGGTaGCTGCGGTGGCTGTGCTCGCTGGCCGCTGGGCCTGATCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGCVWWLRRLLVSEW*LRWLCSLAAGPDRS Trigger: CGAGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACCCAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | GGTGTGTGTGGTGGCTGCGCAGGCTGCTGGTCAGCGAATGGTGACTaGGGTGGCTGTGCTCGCTGGCCGCTGGGCCTGATCGCTCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVCGGCAGCWSANGD*GGCARWPLGLIARL Trigger: CAAGCGAGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | CTCCGGGTGGGCCATAGCTTGGGTGTGTGTGGTGGCTGCGCAGGCTaGTGGTCAGCGAATGGTGACTGCGGTGGCTGTGCTCGCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LRVGHSLGVCGGCAG*WSANGDCGGCARWP Trigger: CGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACCCAAGCTATGGCCCACCCGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | CGGGTGGGCCATAGCTTGGGTGTGTGTGGTGGCTGCGCAGGCTGCTaGTCAGCGAATGGTGACTGCGGTGGCTGTGCTCGCTGGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RVGHSLGVCGGCAGC*SANGDCGGCARWPL Trigger: CAGCGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACCCAAGCTATGGCCCACCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | CGGGCTGCGTGCTCCGGGCCATCCCTCCGTCGGGGCCGCTCTCGTTaGGCAGACACCAAGGAGTCGGTCTCCGTGTCATTGTCCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: RAACSGPSLRRGRSR*ADTKESVSVSLSRF Trigger: GAATCTGGACAATGACACGGAGACCGACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCGACGGAGGGATGGCCCGGAGCACGCAGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | CTTGGTGCCCGCTCCCGTGGCCCCCTCAGACTGCTGCGTGTAGTGTaGTCTGACTCGCTGCCGCTACCACCTGACTTGGAGTCCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGARSRGPLRLLRVV*SDSLPLPPDLESPA Trigger: AGCTGGGGACTCCAAGTCAGGTGGTAGCGGCAGCGAGTCAGACCACACTACACGCAGCAGTCTGAGGGGGCCACGGGAGCGGGCACCAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | CATCGGGGGACCATAGAGAGGGGGCACTCCGGGTGGGCCATAGCTTaGGTGTGTGTGGTGGCTGCGCAGGCTGCTGGTCAGCGAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRGTIERGHSGWAIA*VCVVAAQAAGQRMV Trigger: CACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACCCAAGCTATGGCCCACCCGGAGTGCCCCCTCTCTATGGTCCCCCGATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | TGGAGCCACTGCTCCGACTGCCTTCACTGTGCTGACTGCTGGCGCTaGCCCCACCGTAGCTGTAGCCCAGTTCTGGGAAGCCTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSHCSDCLHCADCWR*PHRSCSPVLGSLGV Trigger: CACACCCAGGCTTCCCAGAACTGGGCTACAGCTACGGTGGGGGCAGCGCCAGCAGTCAGCACAGTGAAGGCAGTCGGAGCAGTGGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | GGTCATCATCAGCATCGGGGGACCATAGAGAGGGGGCACTCCGGGTaGGCCATAGCTTGGGTGTGTGTGGTGGCTGCGCAGGCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHHQHRGTIERGHSG*AIAWVCVVAAQAAG Trigger: ACCAGCAGCCTGCGCAGCCACCACACACACCCAAGCTATGGCCCACCCGGAGTGCCCCCTCTCTATGGTCCCCCGATGCTGATGATGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | AGAACTCACTGGGGTTTCCCATTGCCATGCGGAAGGACTGTCTGCTaGCCGTCAGTTCCGGGGGCACCGAGGCCAGGTCACGCCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTHWGFPLPCGRTVC*PSVPGAPRPGHALE Trigger: CTCCAGGGCGTGACCTGGCCTCGGTGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCAGTGAGTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003318.13 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | CAAAGAACTCACTGGGGTTTCCCATTGCCATGCGGAAGGACTGTCTaGTGGCCGTCAGTTCCGGGGGCACCGAGGCCAGGTCACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRTHWGFPLPCGRTV*WPSVPGAPRPGHAL Trigger: CAGGGCGTGACCTGGCCTCGGTGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCAGTGAGTTCTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003318.13 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | CGAAATTCTTGGTGGGGTTTCCCATTGCCATGCGGAAGGACTGTCTaGTGGCCGTCAGTTCCGGGGGCACCGAGGCCAGGTCACGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RNSWWGFPLPCGRTV*WPSVPGAPRPGHAL Trigger: CAGGGCGTGACCTGGCCTCGGTGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCACCAAGAATTTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 90 bp | CAGCTTTTGGGTCCTTCTCCTTGCGCCGGTCGCTGCCACTTCGGTTaGAGCCACTGCTCCGACTGCCTTCACTGTGCTGACTGCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLGPSPCAGRCHFG*SHCSDCLHCADCWR Trigger: GCGCCAGCAGTCAGCACAGTGAAGGCAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCGACCGGCGCAAGGAGAAGGACCCAAAAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | AATTCTTGGTGGGGTTTCCCATTGCCATGCGGAAGGACTGTCTGCTaGCCGTCAGTTCCGGGGGCACCGAGGCCAGGTCACGCCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NSWWGFPLPCGRTVC*PSVPGAPRPGHALE Trigger: CTCCAGGGCGTGACCTGGCCTCGGTGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCACCAAGAATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 90 bp | TGGTGGGTACTGGTAAGGGAAAGCCATAGGCCAAGGGGCAGCTCCTaGGTGCGGCAAAGGAGCCAGTGTGTCCTGGTCAGAGGCGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WWVLVRESHRPRGSS*VRQRSQCVLVRGAT Trigger: AGTGGCGCCTCTGACCAGGACACACTGGCTCCTTTGCCGCACCCAGGAGCTGCCCCTTGGCCTATGGCTTTCCCTTACCAGTACCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | GCCCAGTTCTGGGAAGCCTGGGTGTGGGTTGTAGGGATGCGGAGGTaGTGGGTACTGGTAAGGGAAAGCCATAGGCCAAGGGGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQFWEAWVWVVGMRR*WVLVRESHRPRGSS Trigger: GGAGCTGCCCCTTGGCCTATGGCTTTCCCTTACCAGTACCCACCACCTCCGCATCCCTACAACCCACACCCAGGCTTCCCAGAACTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 90 bp | GTGATGCTGCTGAAAGACGAGGACCGCTCAATCCGGGAGACCTTCTaGTTCCGCCGCCGCCGCTTGTGTCTTCTCATGAGGCGTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VMLLKDEDRSIRETF*FRRRRLCLLMRREA Trigger: TGCCTCACGCCTCATGAGAAGACACAAGCGGCGGCGGCGGAAGCAGAAGGTCTCCCGGATTGAGCGGTCCTCGTCTTTCAGCAGCATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 90 bp | CAGTTCTGGGAAGCCTGGGTGTGGGTTGTAGGGATGCGGAGGTGGTaGGTACTGGTAAGGGAAAGCCATAGGCCAAGGGGCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QFWEAWVWVVGMRRW*VLVRESHRPRGSSW Trigger: CCAGGAGCTGCCCCTTGGCCTATGGCTTTCCCTTACCAGTACCCACCACCTCCGCATCCCTACAACCCACACCCAGGCTTCCCAGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS-3UTR CAA 90 bp | CAGGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGCTGCCACTTCGGTaGGAGCCACTGCTCCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QGPALRRVCVCVCVCVCVSLPLR*EPLLRL Trigger: CAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCGA...CACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 90 bp | CTGGGTGCGGCAAAGGAGCCAGTGTGTCCTGGTCAGAGGCGCCACTaGAGCCATCATGGTCGTGAAGCGATAGGTTGGCCATGTTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGAAKEPVCPGQRRH*SHHGREAIGWPCYH Trigger: GTGGTAACATGGCCAACCTATCGCTTCACGACCATGATGGCTCCAGTGGCGCCTCTGACCAGGACACACTGGCTCCTTTGCCGCACCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS-3UTR CAA 90 bp | GGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGCTACCACCTGACTaGGAGTCCCCAGCTTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTSPEACVCVCVCVCVCVPLPPD*ESPAFG Trigger: CCCAAAAGCTGGGGACTCCAAGTCAGGTGGTAGCGG...CACACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CAA 90 bp | AATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTGGCAGCTCTGACGGGTaGTCAGCACAGAAAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NGLSVTWTALCGAHLLGFGSSDG*SAQKGA Trigger: GGCCCCTTTCTGTGCTGACAACCCGTCAGAGCTGCC...AAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGGGCCTGATCGCTCGCTaGGTGCCCGCTCCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGEEQLNFRVSRVEGCVGLIAR*VPAPVA Trigger: GGCCACGGGAGCGGGCACCAAGCGAGCGATCAGGCC...CACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 90 bp | CTCGGACCTCCAACCCTGACTCAGGGGAGGCCATGGCTTTTACGATaGCCGCCATGTCACTGTGGATGGAGAGGTGGAAATCATCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPPTLTQGRPWLLR*PPCHCGWRGGNHLG Trigger: GCCTAGATGATTTCCACCTCTCCATCCACAGTGACATGGCGGCCATCGTAAAAGCCATGGCCTCCCCTGAGTCAGGGTTGGAGGTCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTATCTGGTGGGGTTTCCCATaGCCATGCGGAAGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLSVTWTALCGAHLLGFIWWGFP*PCGRTV Trigger: GACAGTCCTTCCGCATGGCAATGGGAAACCCCACCA...GATAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 90 bp | CAGGGGAGGCCATGGCTTTTACGATGGCCGCCATGTCACTGTGGATaGAGAGGTGGAAATCATCTAGGCGCTCTGTATCAGGGATGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGRPWLLRWPPCHCG*RGGNHLGALYQGWS Trigger: GCTCCATCCCTGATACAGAGCGCCTAGATGATTTCCACCTCTCCATCCACAGTGACATGGCGGCCATCGTAAAAGCCATGGCCTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS-3UTR CAA 90 bp | CTAGCAGGAAGAGGAGAGGGCAGTCACGGACCAGCCCCATATCTAGGGATGACTTCGGTCTCCGTGTCATaGTCCAGATTCTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGRGEGSHGPAPYLGMTSVSVS*SRFSWL Trigger: CAGCCAGGAGAATCTGGACAATGACACGGAGACCGA...AGTCATCCCTAGATATGGGGCTGGTCCGTGACTGCCCTCTCCTCTTCCTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CAA 90 bp | CAGGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGAGAACGTGATCTaGTTGACGGTATGGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QGPALRRVCVCVCVCVCVSENVI*LTVWRM Trigger: CATCCGCCATACCGTCAACAAGATCACGTTCTCCGA...CACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 90 bp | GACTCAGGGGAGGCCATGGCTTTTACGATGGCCGCCATGTCACTGTaGATGGAGAGGTGGAAATCATCTAGGCGCTCTGTATCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DSGEAMAFTMAAMSL*MERWKSSRRSVSGM Trigger: CATCCCTGATACAGAGCGCCTAGATGATTTCCACCTCTCCATCCACAGTGACATGGCGGCCATCGTAAAAGCCATGGCCTCCCCTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTACCATCACCTCGCTCATaGCTTTGGCCCACAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MACQSPGQPSVEPIFWALPSPRS*LWPTME Trigger: CTCCATTGTGGGCCAAAGCAATGAGCGAGGTGATGG...TAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGAGTAGAAGGGTGTGTGTTCCGCCGCCGCCGCTaGTGTCTTCTCATGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RKGEEQLNFRVSRVEGCVFRRRR*CLLMRR Trigger: ACGCCTCATGAGAAGACACAAGCGGCGGCGGCGGAA...CACACACCCTTCTACTCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | GGGACCAGCCCTGAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGCCGATGAAAGCATaGGGAATGGTAATCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTSPEACVCVCVCVCVCVEPMKA*GMVILS Trigger: GCTCAAGATTACCATTCCCAATGCTTTCATCGGCTC...CACACACACACACACACACACACACACACACACACACGCCTCAGGGCTGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGGGGAAGCTGGGGTTGGAGATCCAGATTTAGAAGTGGCCAGCATATCCAGGGTAGCTTGGCATaGTCGTCCGAGATCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KERGSWGWRSRFRSGQHIQGSLA*SSEISS Trigger: GGAAGAGATCTCGGACGACAATGCCAAGCTACCCTG...GATATGCTGGCCACTTCTAAATCTGGATCTCCAACCCCAGCTTCCCCTCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTGTCAGTCACCTGGACAGCCCTCTGTGGAGCCCATCTTTTGGGCTTTAGAGAACGTGATCTTGTaGACGGTATGGCGGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MACQSPGQPSVEPIFWALENVIL*TVWRMK Trigger: TTTCATCCGCCATACCGTCAACAAGATCACGTTCTC...TAAAGCCCAAAAGATGGGCTCCACAGAGGGCTGTCCAGGTGACTGACAGGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGCCTGATCGCTCGCTaGGTGCCCGCTCCCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGLIAR*VPAPVA Trigger: GGCCACGGGAGCGGGCACCAAGCGAGCGATCAGGCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | ATGCTCTGTAAATTAAGAAAGGGAGAGGAACAGCTGAACTTCAGAGTGTCAAGACGGGTGGGCCATAGCTaGGGTGTGTGTGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MLCKLRKGEEQLNFRVSRRVGHS*GVCGGC Trigger: GCAGCCACCACACACACCCAAGCTATGGCCCACCCG...TCTTGACACTCTGAAGTTCAGCTGTTCCTCTCCCTTTCTTAATTTACAGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | TGTATGTATATATCTATGTGTACGAGGTGGAGGGAAGCAAACTTCTCTACTTCTTCGGGGCCGCTCTCGTaGGGCAGACACCAAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CMYISMCTRWREANFSTSSGPLS*GRHQGV Trigger: GACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCGA...AGAAGTAGAGAAGTTTGCTTCCCTCCACCTCGTACACATAGATATATACATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAGAGTTAGAGAGAACCGAAGACAGCTAAGATCAAATCATGCTTCTAACTTTGGGTCCTTCTCCTaGCGCCGGTCGCTGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KGRVRENRRQLRSNHASNFGSFS*RRSLPL Trigger: AAGTGGCAGCGACCGGCGCAAGGAGAAGGACCCAAA...GTTAGAAGCATGATTTGATCTTAGCTGTCTTCGGTTCTCTCTAACTCTGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGCAGAGTTAGAGAGAACCGAAGACAGCTAAGATCAAATCATGCTTCTAACTGGAGTCCCCAGCTTTaGGGTCCTTCTCCTTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGRVRENRRQLRSNHASNWSPQL*GPSPCA Trigger: GGCGCAAGGAGAAGGACCCAAAAGCTGGGGACTCCA...GTTAGAAGCATGATTTGATCTTAGCTGTCTTCGGTTCTCTCTAACTCTGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | AAAATGAGAGCTGGAATTCAAGCCCAAACCAACTTGACTCCAAATCCCATGCTCTTGAAGCAGGGTAGCTaGGCATTGTCGTCCGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: KMRAGIQAQTNLTPNPMLLKQGS*ALSSEI Trigger: GATCTCGGACGACAATGCCAAGCTACCCTGCTTCAA...GAGCATGGGATTTGGAGTCAAGTTGGTTTGGGCTTGAATTCCAGCTCTCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTCGGGGCCGCTCTCGTaGGGCAGACACCAAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFSGPLS*GRHQGV Trigger: GACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCGA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCGGGTGGGCCATAGCTaGGGTGTGTGTGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFRVGHS*GVCGGC Trigger: GCAGCCACCACACACACCCAAGCTATGGCCCACCCG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGGCAGCTCTGACGGGTaGTCAGCACAGAAAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFGSSDG*SAQKGA Trigger: GGCCCCTTTCTGTGCTGACAACCCGTCAGAGCTGCC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTTCCGCCGCCGCCGCTaGTGTCTTCTCATGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFFRRRR*CLLMRR Trigger: ACGCCTCATGAGAAGACACAAGCGGCGGCGGCGGAA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTCGCTGCCACTTCGGTaGGAGCCACTGCTCCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFSLPLR*EPLLRL Trigger: CAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCGA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGACACCACCCGGCCATaGAAGCAGGGTAGCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFDTTRP*KQGSLA Trigger: TGCCAAGCTACCCTGCTTCAATGGCCGGGTGGTGTC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTTTGGGTCCTTCTCCTaGCGCCGGTCGCTGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFFGSFS*RRSLPL Trigger: AAGTGGCAGCGACCGGCGCAAGGAGAAGGACCCAAA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTGGAGTCCCCAGCTTTaGGGTCCTTCTCCTTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFWSPQL*GPSPCA Trigger: GGCGCAAGGAGAAGGACCCAAAAGCTGGGGACTCCA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCCGCTACCACCTGACTaGGAGTCCCCAGCTTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFPLPPD*ESPAFG Trigger: CCCAAAAGCTGGGGACTCCAAGTCAGGTGGTAGCGG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCACTGGGGTTTCCCATaGCCATGCGGAAGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFHWGFP*PCGRTV Trigger: GACAGTCCTTCCGCATGGCAATGGGAAACCCCAGTG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCAGGGTAGCTTGGCATaGTCGTCCGAGATCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFQGSLA*SSEISS Trigger: GGAAGAGATCTCGGACGACAATGCCAAGCTACCCTG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTCGGTCTCCGTGTCATaGTCCAGATTCTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFSVSVS*SRFSWL Trigger: CAGCCAGGAGAATCTGGACAATGACACGGAGACCGA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTCCATCACCTCGCTCATaGCTTTGGCCCACAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFPSPRS*LWPTME Trigger: CTCCATTGTGGGCCAAAGCAATGAGCGAGGTGATGG...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTTGAAGCAGGGTAGCTaGGCATTGTCGTCCGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFLKQGS*ALSSEI Trigger: GATCTCGGACGACAATGCCAAGCTACCCTGCTTCAA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTTCGGAGAACGTGATCTaGTTGACGGTATGGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFSENVI*LTVWRM Trigger: CATCCGCCATACCGTCAACAAGATCACGTTCTCCGA...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGAGCCGATGAAAGCATaGGGAATGGTAATCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFEPMKA*GMVILS Trigger: GCTCAAGATTACCATTCCCAATGCTTTCATCGGCTC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS-3UTR CAA 90 bp | CAAACAGTAGCAGTTAGTTCCATTTATTTCCCTTTCAGGTACCAAAGTGTTTTTGAGAACGTGATCTTGTaGACGGTATGGCGGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QTVAVSSIYFPFRYQSVFENVIL*TVWRMK Trigger: TTTCATCCGCCATACCGTCAACAAGATCACGTTCTC...AAAAACACTTTGGTACCTGAAAGGGAAATAAATGGAACTAACTGCTACTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003318.13 |
||
| CDS TCA 72 bp | GTGACTGCGGTGGCTGTGCTCGCTGGCCGCTGGGCCTaGTCGCTCGCTTGGTGCCCGCTCCCGTGGCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VTAVAVLAGRWA*SLAWCPLPWPP Trigger: AGGGGGCCACGGGAGCGGGCACCAAGCGAGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACCGCAGTCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CAA 72 bp | GGCTGTGCTCGCTGGCCGCTGGGCCTGATCGCTCGCTaGGTGCCCGCTCCCGTGGCCCCCTCAGACTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCARWPLGLIAR*VPAPVAPSDCC Trigger: GCAGCAGTCTGAGGGGGCCACGGGAGCGGGCACCAAGCGAGCGATCAGGCCCAGCGGCCAGCGAGCACAGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS TCA 72 bp | GTGTGGTGGCTGCGCAGGCTGCTGGTCAGCGAATGGTaGCTGCGGTGGCTGTGCTCGCTGGCCGCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VWWLRRLLVSEW*LRWLCSLAAGP Trigger: AGGCCCAGCGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS GCA 72 bp | TCGCCGCTCACCCTTTGTGGTTCCATTGAGTCGGGCTaGGTGCTCCGGGCCATCCCTCCGTCGGGGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPLTLCGSIESG*VLRAIPPSGPL Trigger: GAGCGGCCCCGACGGAGGGATGGCCCGGAGCACGCAGCCCGACTCAATGGAACCACAAAGGGTGAGCGGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS GCA 72 bp | CGCTCACCCTTTGTGGTTCCATTGAGTCGGGCTGCGTaGTCCGGGCCATCCCTCCGTCGGGGCCGCTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RSPFVVPLSRAA*SGPSLRRGRSR Trigger: ACGAGAGCGGCCCCGACGGAGGGATGGCCCGGAGCACGCAGCCCGACTCAATGGAACCACAAAGGGTGAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS GCA 72 bp | GGTGCCTGTCATGGCTGCCGTGTGAGAGACCCAGGCTaGAGGGTCAATGGGACGGATGGGCTCGCTCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GACHGCRVRDPG*RVNGTDGLAPG Trigger: CCCCGGAGCGAGCCCATCCGTCCCATTGACCCTGCAGCCTGGGTCTCTCACACGGCAGCCATGACAGGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 |
||
| CDS CCA 72 bp | TGGTCAGCGAATGGTGACTGCGGTGGCTGTGCTCGCTaGCCGCTGGGCCTGATCGCTCGCTTGGTGCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSANGDCGGCAR*PLGLIARLVPA Trigger: AGCGGGCACCAAGCGAGCGATCAGGCCCAGCGGCCAGCGAGCACAGCCACCGCAGTCACCATTCGCTGACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS TCA 72 bp | CGGGTTGTCAGCACAGAAAGGGGCCGGCTCTGGGTGTaGGCCCTCGGCAGATACCAGCCAGGACACCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: RVVSTERGRLWV*ALGRYQPGHHP Trigger: CGGGTGGTGTCCTGGCTGGTATCTGCCGAGGGCTCACACCCAGAGCCGGCCCCTTTCTGTGCTGACAACCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS GCA 72 bp | CCTTGCGCCGGTCGCTGCCACTTCGGTTGGAGCCACTaGTCCGACTGCCTTCACTGTGCTGACTGCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PCAGRCHFGWSH*SDCLHCADCWR Trigger: GCGCCAGCAGTCAGCACAGTGAAGGCAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCGACCGGCGCAAGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CCA 72 bp | TGCTCCGGGCCATCCCTCCGTCGGGGCCGCTCTCGTTaGGCAGACACCAAGGAGTCGGTCTCCGTGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: CSGPSLRRGRSR*ADTKESVSVSL Trigger: CAATGACACGGAGACCGACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCGACGGAGGGATGGCCCGGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CCA 72 bp | GCTGGCGCTGCCCCCACCGTAGCTGTAGCCCAGTTCTaGGAAGCCTGGGTGTGGGTTGTAGGGATGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGAAPTVAVAQF*EAWVWVVGMRR Trigger: CCTCCGCATCCCTACAACCCACACCCAGGCTTCCCAGAACTGGGCTACAGCTACGGTGGGGGCAGCGCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CCA 72 bp | CAGCATCGGGGGACCATAGAGAGGGGGCACTCCGGGTaGGCCATAGCTTGGGTGTGTGTGGTGGCTGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QHRGTIERGHSG*AIAWVCVVAAQ Trigger: CTGCGCAGCCACCACACACACCCAAGCTATGGCCCACCCGGAGTGCCCCCTCTCTATGGTCCCCCGATGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CAA 72 bp | GTGCTCCGGGCCATCCCTCCGTCGGGGCCGCTCTCGTaGGGCAGACACCAAGGAGTCGGTCTCCGTGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: VLRAIPPSGPLS*GRHQGVGLRVI Trigger: AATGACACGGAGACCGACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCGACGGAGGGATGGCCCGGAGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CAA 90 bp | TCGGGCTGCGTGCTCCGGGCCATCCCTCCGTCGGGGCCGCTCTCGTaGGGCAGACACCAAGGAGTCGGTCTCCGTGTCATTGTCCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: SGCVLRAIPPSGPLS*GRHQGVGLRVIVQI Trigger: AATCTGGACAATGACACGGAGACCGACTCCTTGGTGTCTGCCCAACGAGAGCGGCCCCGACGGAGGGATGGCCCGGAGCACGCAGCCCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CAA 90 bp | GCATCGGGGGACCATAGAGAGGGGGCACTCCGGGTGGGCCATAGCTaGGGTGTGTGTGGTGGCTGCGCAGGCTGCTGGTCAGCGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGDHREGALRVGHS*GVCGGCAGCWSANG Trigger: ACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACCCAAGCTATGGCCCACCCGGAGTGCCCCCTCTCTATGGTCCCCCGATGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS GCA 72 bp | CACTGGGGTTTCCCATTGCCATGCGGAAGGACTGTCTaGTGGCCGTCAGTTCCGGGGGCACCGAGGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HWGFPLPCGRTV*WPSVPGAPRPG Trigger: ACCTGGCCTCGGTGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCAGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003318.13 ENSMUST00000171774.2 |
||
| CDS GCA 72 bp | TGGTGGGGTTTCCCATTGCCATGCGGAAGGACTGTCTaGTGGCCGTCAGTTCCGGGGGCACCGAGGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WWGFPLPCGRTV*WPSVPGAPRPG Trigger: ACCTGGCCTCGGTGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
||
| CDS CCA 72 bp | CGCTCCCGTGGCCCCCTCAGACTGCTGCGTGTAGTGTaGTCTGACTCGCTGCCGCTACCACCTGACTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSRGPLRLLRVV*SDSLPLPPDLE Trigger: CTCCAAGTCAGGTGGTAGCGGCAGCGAGTCAGACCACACTACACGCAGCAGTCTGAGGGGGCCACGGGAGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS CCA 72 bp | TGGGGTTTCCCATTGCCATGCGGAAGGACTGTCTGCTaGCCGTCAGTTCCGGGGGCACCGAGGCCAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WGFPLPCGRTVC*PSVPGAPRPGH Trigger: GTGACCTGGCCTCGGTGCCCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
||
| CDS TCA 72 bp | GGTCAATGGGACGGATGGGCTCGCTCCGGGGTAATGTaGAGCAGCCGCGAGGACTTGGGTCCCAGCACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GQWDGWARSGVM*SSREDLGPSTW Trigger: CCAAGTGCTGGGACCCAAGTCCTCGCGGCTGCTTCACATTACCCCGGAGCGAGCCCATCCGTCCCATTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 |
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| CDS TCA 72 bp | AGGCGGGGAAGGTGCCTGTCATGGTCCGGGGTAATGTaGAGCAGCCGCGAGGACTTGGGTCCCAGCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: RRGRCLSWSGVM*SSREDLGPSTW Trigger: CCAAGTGCTGGGACCCAAGTCCTCGCGGCTGCTTCACATTACCCCGGACCATGACAGGCACCTTCCCCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171774.2 |
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| CDS GCA 72 bp | TGCTCCGACTGCCTTCACTGTGCTGACTGCTGGCGCTaGCCCCACCGTAGCTGTAGCCCAGTTCTGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: CSDCLHCADCWR*PHRSCSPVLGS Trigger: GCTTCCCAGAACTGGGCTACAGCTACGGTGGGGGCAGCGCCAGCAGTCAGCACAGTGAAGGCAGTCGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 72 bp | CCCCAGCTTTTGGGTCCTTCTCCTTGCGCCGGTCGCTaGCACTTCGGTTGGAGCCACTGCTCCGACTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PQLLGPSPCAGR*HFGWSHCSDCL Trigger: AAGGCAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCGACCGGCGCAAGGAGAAGGACCCAAAAGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 72 bp | GGCCATAGCTTGGGTGTGTGTGGTGGCTGCGCAGGCTaGTGGTCAGCGAATGGTGACTGCGGTGGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GHSLGVCGGCAG*WSANGDCGGCA Trigger: AGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACCCAAGCTATGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | GGTCCTTCTCCTTGCGCCGGTCGCTGCCACTTCGGTTaGAGCCACTGCTCCGACTGCCTTCACTGTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GPSPCAGRCHFG*SHCSDCLHCAD Trigger: GTCAGCACAGTGAAGGCAGTCGGAGCAGTGGCTCCAACCGAAGTGGCAGCGACCGGCGCAAGGAGAAGGACC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | CATAGCTTGGGTGTGTGTGGTGGCTGCGCAGGCTGCTaGTCAGCGAATGGTGACTGCGGTGGCTGTGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: HSLGVCGGCAGC*SANGDCGGCAR Trigger: GCGAGCACAGCCACCGCAGTCACCATTCGCTGACCAGCAGCCTGCGCAGCCACCACACACACCCAAGCTATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CAA 90 bp | CCAATGCCTCCTGTGCGTTCCATCGAAGGTGGCAGCTCTGACGGGTaGTCAGCACAGAAAGGGGCCGGCTCTGGGTGTGAGCCCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: PMPPVRSIEGGSSDG*SAQKGAGSGCEPSA Trigger: TGCCGAGGGCTCACACCCAGAGCCGGCCCCTTTCTGTGCTGACAACCCGTCAGAGCTGCCACCTTCGATGGAACGCACAGGAGGCATTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CAA 90 bp | GGTCTGACTCGCTGCCGCTACCACCTGACTTGGAGTCCCCAGCTTTaGGGTCCTTCTCCTTGCGCCGGTCGCTGCCACTTCGGTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GLTRCRYHLTWSPQL*GPSPCAGRCHFGWS Trigger: GCTCCAACCGAAGTGGCAGCGACCGGCGCAAGGAGAAGGACCCAAAAGCTGGGGACTCCAAGTCAGGTGGTAGCGGCAGCGAGTCAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CAA 90 bp | CTGCTGCGTGTAGTGTGGTCTGACTCGCTGCCGCTACCACCTGACTaGGAGTCCCCAGCTTTTGGGTCCTTCTCCTTGCGCCGGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLRVVWSDSLPLPPD*ESPAFGSFSLRRSL Trigger: CAGCGACCGGCGCAAGGAGAAGGACCCAAAAGCTGGGGACTCCAAGTCAGGTGGTAGCGGCAGCGAGTCAGACCACACTACACGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 72 bp | TGCTTAAGGAGGGGCTCATGCCATAGGCGGGGAAGGTaGCTGTCATGGCTGCCGTGTGAGAGACCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CLRRGSCHRRGR*LSWLPCERPRL Trigger: CAGCCTGGGTCTCTCACACGGCAGCCATGACAGGCACCTTCCCCGCCTATGGCATGAGCCCCTCCTTAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 |
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| CDS CAA 72 bp | CCTGTGCGTTCCATCGAAGGTGGCAGCTCTGACGGGTaGTCAGCACAGAAAGGGGCCGGCTCTGGGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PVRSIEGGSSDG*SAQKGAGSGCE Trigger: CTCACACCCAGAGCCGGCCCCTTTCTGTGCTGACAACCCGTCAGAGCTGCCACCTTCGATGGAACGCACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS TCA 72 bp | AATGCCTCCTGTGCGTTCCATCGAAGGTGGCAGCTCTaGCGGGTTGTCAGCACAGAAAGGGGCCGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: NASCAFHRRWQL*RVVSTERGRLW Trigger: CCAGAGCCGGCCCCTTTCTGTGCTGACAACCCGTCAGAGCTGCCACCTTCGATGGAACGCACAGGAGGCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | GGTCTCGGACCTCCAACCCTGACTCAGGGGAGGCCATaGCTTTTACGATGGCCGCCATGTCACTGTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: GLGPPTLTQGRP*LLRWPPCHCGW Trigger: CCATCCACAGTGACATGGCGGCCATCGTAAAAGCCATGGCCTCCCCTGAGTCAGGGTTGGAGGTCCGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | CTGGTAAGGGAAAGCCATAGGCCAAGGGGCAGCTCCTaGGTGCGGCAAAGGAGCCAGTGTGTCCTGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LVRESHRPRGSS*VRQRSQCVLVR Trigger: TCTGACCAGGACACACTGGCTCCTTTGCCGCACCCAGGAGCTGCCCCTTGGCCTATGGCTTTCCCTTACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | GAAGCCTGGGTGTGGGTTGTAGGGATGCGGAGGTGGTaGGTACTGGTAAGGGAAAGCCATAGGCCAAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: EAWVWVVGMRRW*VLVRESHRPRG Trigger: GCCCCTTGGCCTATGGCTTTCCCTTACCAGTACCCACCACCTCCGCATCCCTACAACCCACACCCAGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 72 bp | AGAGCCCGAAATTCTTGGTGGGGTTTCCCATTGCCATaGGGAAGGACTGTCTGCTGGCCGTCAGTTCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RARNSWWGFPLP*GRTVCWPSVPG Trigger: CCCCGGAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCACCAAGAATTTCGGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 72 bp | GCAAAGGAGCCAGTGTGTCCTGGTCAGAGGCGCCACTaGAGCCATCATGGTCGTGAAGCGATAGGTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AKEPVCPGQRRH*SHHGREAIGWP Trigger: TGGCCAACCTATCGCTTCACGACCATGATGGCTCCAGTGGCGCCTCTGACCAGGACACACTGGCTCCTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | TGGGAAGCCTGGGTGTGGGTTGTAGGGATGCGGAGGTaGTGGGTACTGGTAAGGGAAAGCCATAGGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: WEAWVWVVGMRR*WVLVRESHRPR Trigger: CCTTGGCCTATGGCTTTCCCTTACCAGTACCCACCACCTCCGCATCCCTACAACCCACACCCAGGCTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | CCAACCCTGACTCAGGGGAGGCCATGGCTTTTACGATaGCCGCCATGTCACTGTGGATGGAGAGGTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: PTLTQGRPWLLR*PPCHCGWRGGN Trigger: ATTTCCACCTCTCCATCCACAGTGACATGGCGGCCATCGTAAAAGCCATGGCCTCCCCTGAGTCAGGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS GCA 72 bp | GTCAAAGAGCCCGAAATTCTTGGTGGGGTTTCCCATTaGCATGCGGAAGGACTGTCTGCTGGCCGTCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VKEPEILGGVSH*HAEGLSAGRQF Trigger: GAACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCACCAAGAATTTCGGGCTCTTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 72 bp | GAGGCCATGGCTTTTACGATGGCCGCCATGTCACTGTaGATGGAGAGGTGGAAATCATCTAGGCGCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: EAMAFTMAAMSL*MERWKSSRRSV Trigger: TACAGAGCGCCTAGATGATTTCCACCTCTCCATCCACAGTGACATGGCGGCCATCGTAAAAGCCATGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CCA 72 bp | CGCCACTGGAGCCATCATGGTCGTGAAGCGATAGGTTaGCCATGTTACCACAGAGGTCGCCAAAGATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RHWSHHGREAIG*PCYHRGRQRCS Trigger: ACTACATCTTTGGCGACCTCTGTGGTAACATGGCCAACCTATCGCTTCACGACCATGATGGCTCCAGTGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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| CDS CAA 72 bp | AGTCAAAGAGCCCGAAATTCTTGGTGGGGTTTCCCATaGCCATGCGGAAGGACTGTCTGCTGGCCGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SQRARNSWWGFP*PCGRTVCWPSV Trigger: AACTGACGGCCAGCAGACAGTCCTTCCGCATGGCAATGGGAAACCCCACCAAGAATTTCGGGCTCTTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171572.9 |
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| CDS CCA 72 bp | TTTACGATGGCCGCCATGTCACTGTGGATGGAGAGGTaGAAATCATCTAGGCGCTCTGTATCAGGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: FTMAAMSLWMER*KSSRRSVSGME Trigger: CTCCATCCCTGATACAGAGCGCCTAGATGATTTCCACCTCTCCATCCACAGTGACATGGCGGCCATCGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003318.13 ENSMUST00000171572.9 ENSMUST00000171774.2 |
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