Pregenerated sensors for DVL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029071Ensembl transcript IDs: ENSMUST00000030948.16, ENSMUST00000168552.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTGCTCCCTCTGCCCTGGCCCAGAGCCCACAGCTGATCTATCCTaGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ACSLCPGPEPTADLS*LATTTASAELLAQQ Trigger: CTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGTGGGCTCTGGGCCAGGGCAGAGGGAGCAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR CCA 90 bp | CTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTaGCACAGCAGGAGCACAGACTCAGCCACAGGCAGCGCTGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: LIYPGWPPPRPAQSS*HSRSTDSATGSAED Trigger: GTCTTCAGCGCTGCCTGTGGCTGAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR CCA 90 bp | CTACCCAGTCACTCAGACTTTGACACAGTGTCTAGTGTAGATGTGTaGGGCCGCTGTGCCGGGATGGCAGTGGCACATGATGATGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LPSHSDFDTVSSVDV*GRCAGMAVAHDDGQ Trigger: CTGCCCATCATCATGTGCCACTGCCATCCCGGCACAGCGGCCCCACACATCTACACTAGACACTGTGTCAAAGTCTGAGTGACTGGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| 3UTR TCA 90 bp | CATGAACTTAGCGACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTaGGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: HELSDSQPVSLCTVL*GFGARGTKSPREPF Trigger: GAAAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGTCGCTAAGTTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR CCA 90 bp | GGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATaGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GQGVPRAQESLSCSK*RSLPKKGTRRWSLR Trigger: TCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR GCA 90 bp | TTGTGTTCACTGTCACCCACCACTGAGACTGAGACAGTGGCTAGGTaGCAGGTCTCTCTCCTGTCTCTCCTACTAGCTACCCTTCACATA | + |
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Preference number: 1 (lower is better) Translates to: LCSLSPTTETETVAR*QVSLLSLLLATLHI Trigger: TATGTGAAGGGTAGCTAGTAGGAGAGACAGGAGAGAGACCTGGCACCTAGCCACTGTCTCAGTCTCAGTGGTGGGTGACAGTGAACACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGCCAGCGCAGAGCTCCTaGCACAGCAGGAGCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: PCAQFCEALGQGVPRAQEPAQSS*HSRSTD Trigger: GTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGG...CTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGTGTAGATGTGTGGGGCCGCTGTGCCGGGATGGCAGTGGCACATGATGATCTGATCTATCCTGGCTaGCCACCACCACGGCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: SSVDVWGRCAGMAVAHDDLIYPG*PPPRPA Trigger: CGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG...ATCATCATGTGCCACTGCCATCCCGGCACAGCGGCCCCACACATCTACACTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGACTGATCTATCCTGGCTaGCCACCACCACGGCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: PVHSSVRLWGKGYQEPKRLIYPG*PPPRPA Trigger: CGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG...TCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGCCAGCGCAGAGCTCCTaGCACAGCAGGAGCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: EVTSKEGNQEVVPETCAEPAQSS*HSRSTD Trigger: GTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGG...CTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR TCA 90 bp | AGACCCCACCTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAACTGTGCACAGTTCTGTaGGGCTTTGGGGCAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RPHLGSQRGLKALSNPSKLCTVL*GFGARG Trigger: ACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAG...TTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAGGTGGGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR GCA 90 bp | GTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGGTGTAGCCTGCTCCCTCTaGCCTGGCCCAGAGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: VPPSAAPRADKMSSQYPGVACSL*PGPEPT Trigger: TGTGGGCTCTGGGCCAGGGCAGAGGGAGCAGGCTAC...ACCAGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCGTAGCCTGCTCCCTCTaGCCTGGCCCAGAGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFVACSL*PGPEPT Trigger: TGTGGGCTCTGGGCCAGGGCAGAGGGAGCAGGCTAC...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGAAGCCAATATCCTGGTaGTATGGCTGCCCTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: EVTSKEGNQEVVPETCAEKPISW*YGCPQA Trigger: GGCCTGAGGGCAGCCATACCACCAGGATATTGGCTT...CTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCACATGATGATGGGCAGCCACCAGAACAGAAACAGAACAGGGCCCAGCTCTAAGGGAACCAGGAGGTaGTCCCTGAGACTTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WHMMMGSHQNRNRTGPSSKGTRR*SLRLVL Trigger: CAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTT...AGAGCTGGGCCCTGTTCTGTTTCTGTTCTGGTGGCTGCCCATCATCATGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| 3UTR-3UTR CCA 90 bp | AGACCCCACCTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAAAAGGGAACCAGGAGGTaGTCCCTGAGACTTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RPHLGSQRGLKALSNPSKKGTRR*SLRLVL Trigger: CAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTT...TTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAGGTGGGGTCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR CAA 90 bp | TTAGCGACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTGAGGCTTaGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LATVSLCPCAQFCEA*GQGVPRAQESLSCS Trigger: AGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGTCGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCACATGATGATGGGCAGCCACCAGAACAGAAACAGAACAGGGCCCAGCTCTCTTTCTTGTTCTAAATaGAGGTCACTTCCAAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: WHMMMGSHQNRNRTGPSSLSCSK*RSLPKK Trigger: CTTCTTTGGAAGTGACCTCCATTTAGAACAAGAAAG...AGAGCTGGGCCCTGTTCTGTTTCTGTTCTGGTGGCTGCCCATCATCATGTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| 3UTR CCA 72 bp | CCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTaGCACAGCAGGAGCACAGACTCAGCCACAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PGWPPPRPAQSS*HSRSTDSATGS Trigger: GCTGCCTGTGGCTGAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR TCA 72 bp | AGCGACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTaGGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SDSQPVSLCTVL*GFGARGTKSPR Trigger: TCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGTCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR GCA 72 bp | CTGTCACCCACCACTGAGACTGAGACAGTGGCTAGGTaGCAGGTCTCTCTCCTGTCTCTCCTACTAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: LSPTTETETVAR*QVSLLSLLLAT Trigger: GGTAGCTAGTAGGAGAGACAGGAGAGAGACCTGGCACCTAGCCACTGTCTCAGTCTCAGTGGTGGGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| 3UTR GCA 72 bp | CAGCCACCAGAACAGAAACAGAACAGGGCCCAGCTCTaGAGCTCTTGTGTTCACTGTCACCCACCACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QPPEQKQNRAQL*SSCVHCHPPLR Trigger: TCTCAGTGGTGGGTGACAGTGAACACAAGAGCTGCAGAGCTGGGCCCTGTTCTGTTTCTGTTCTGGTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| 3UTR CCA 72 bp | AGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTaGTGGTATGGCTGCCCTCAGGCCCTCCTCTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: SPKSRQNVKPIS*WYGCPQALLCS Trigger: GCTACAGAGGAGGGCCTGAGGGCAGCCATACCACCAGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR CCA 72 bp | GTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATaGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VPRAQESLSCSK*RSLPKKGTRRW Trigger: CCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| 3UTR GCA 72 bp | CCTTCACATACCTTCAGTACAAACTGTGTTGTCATGTaGCAAGTAGCAGGTGGGGAAAGGGGCATGCAAACT | + |
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Preference number: 3 (lower is better) Translates to: PSHTFSTNCVVM*QVAGGERGMQT Trigger: AGTTTGCATGCCCCTTTCCCCACCTGCTACTTGGCACATGACAACACAGTTTGTACTGAAGGTATGTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| CDS-3UTR CCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCGCGCTCCTCTCGGCCTaGGGTCCGATGGCTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLALLSA*GPMAAP Trigger: CGGAGCAGCCATCGGACCCCAGGCCGAGAGGAGCGC...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCGGGGGCAGGTCCGTGTaGCTGTCAGTGCCCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLGGRSV*LSVPWD Trigger: GTCCCAGGGCACTGACAGCCACACGGACCTGCCCCC...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | GAGCCCACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCGGGGGCAGGTCCGTGTaGCTGTCAGTGCCCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EPTADLSWLATTTASAELGGRSV*LSVPWD Trigger: GTCCCAGGGCACTGACAGCCACACGGACCTGCCCCC...GAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGTGGGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCGCAGGGCGGGGGTCCTaGGTACTGGTAGGGGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LIYPGWPPPRPAQSSWHSAGRGS*VLVGVA Trigger: GGCTACCCCTACCAGTACCCAGGACCCCCGCCCTGC...GCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR GCA 90 bp | CTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCCCGTGTGGCTGTCAGTaGCCTGGGACCCTGCATCCG | + |
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Preference number: 4 (lower is better) Translates to: LIYPGWPPPRPAQSSWHSPCGCQ*PGTLHP Trigger: CGGATGCAGGGTCCCAGGGCACTGACAGCCACACGG...GCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCTGTCCTCTCAAGGGGTaGGGGCAGGTCCGTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLCPLKG*GQVRVA Trigger: AGCCACACGGACCTGCCCCCACCCCTTGAGAGGACA...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCCAGGGTACTGATGGGTaGGGCAGTGGGGCCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLQGTDG*GSGASV Trigger: CACACTGGCCCCACTGCCCCACCCATCAGTACCCTG...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCCCTCCCTTCGCTCCTTaGAGCCCTCCACGTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLPPFAP*SPPRVC Trigger: ACACACACGTGGAGGGCTTCAAGGAGCGAAGGGAGG...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGGTAGCTCCGAGGGGTTaGGTCCCAGCACTTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQVAPRG*VPALGH Trigger: GTGGCCAAGTGCTGGGACCCAACCCCTCGGAGCTAC...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | GAGCCCACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCGTAGCTCCGAGGGGTTaGGTCCCAGCACTTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: EPTADLSWLATTTASAELVAPRG*VPALGH Trigger: GTGGCCAAGTGCTGGGACCCAACCCCTCGGAGCTAC...GAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGTGGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCGGGTGGCCCTCCAGGTaGCCCACCCACTACTGCATA | + |
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Preference number: 4 (lower is better) Translates to: LIYPGWPPPRPAQSSWHSGWPSR*PTHYCI Trigger: TATGCAGTAGTGGGTGGGCCACCTGGAGGGCCACCC...GCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR TCA 90 bp | CTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCCCTCCCTTCGCTCCTTaGAGCCCTCCACGTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LIYPGWPPPRPAQSSWHSPPFAP*SPPRVC Trigger: ACACACACGTGGAGGGCTTCAAGGAGCGAAGGGAGG...GCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR GCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCTAGCCGAGAGGAGGTaGTCTGCTCTGTGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQLAERR*SALWSC Trigger: GCAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAG...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCCGCCAGGCACTGAGCTaGTTAGTGAGGAAGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLRQALS*LVRKSW Trigger: CCAGCTCTTCCTCACTAACCAGCTCAGTGCCTGGCG...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGGATGGCTGCTCCGTGTaGACCCACTGCTCTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQDGCSV*THCSCS Trigger: GGAGCAAGAGCAGTGGGTCCACACGGAGCAGCCATC...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR TCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCCGGATCTCCAGTCCTaGGTCTGGCAACTGCATGAC | + |
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Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQPDLQS*VWQLHD Trigger: GTCATGCAGTTGCCAGACTCAGGACTGGAGATCCGG...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR TCA 90 bp | CTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCCACTGGAGCCACTGTTaGGGTTCAGGGATGCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LIYPGWPPPRPAQSSWHSHWSHC*GSGMRG Trigger: ACCTCGCATCCCTGAACCTCAACAGTGGCTCCAGTG...GCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR TCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGGCAACAGCTGAAGCCTaGCTTCGAGGGCTACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQATAEA*LRGLLP Trigger: TGGCAGTAGCCCTCGAAGTCAGGCTTCAGCTGTTGC...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR GCA 90 bp | ACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACTAGCCGAGAGGAGGTaGTCTGCTCTGTGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TADLSWLATTTASAELLALAERR*SALWSC Trigger: GCAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAG...TGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR TCA 90 bp | ACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACCGGATCTCCAGTCCTaGGTCTGGCAACTGCATGAC | + |
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Preference number: 4 (lower is better) Translates to: TADLSWLATTTASAELLAPDLQS*VWQLHD Trigger: GTCATGCAGTTGCCAGACTCAGGACTGGAGATCCGG...TGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR GCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGTCTGCTCTGTGGAGCTaGTCAGCCGGCTCGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQSALWS*SAGSYC Trigger: ACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAGA...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCCACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCGCTACCTGTAAGTTCTaGAGGGACAGCAGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTADLSWLATTTASAELATCKF*RDSSQL Trigger: GAGCTGGCTGCTGTCCCTCCAGAACTTACAGGTAGC...GAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGTGGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGGCTACCTGTAAGTTCTaGAGGGACAGCAGCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQATCKF*RDSSQL Trigger: GAGCTGGCTGCTGTCCCTCCAGAACTTACAGGTAGC...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGCAAGGGCCAGGGTACTaGTGGGTGGGGCAGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVTSKEGNQEVVPETCAEQGPGY*WVGQWG Trigger: GCCCCACTGCCCCACCCATCAGTACCCTGGCCCTTG...CTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCATCTTGTTCACGGTGTaGCTCAGGAAACCGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLILFTV*LRKPCF Trigger: GAAGCACGGTTTCCTGAGGCACACCGTGAACAAGAT...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGGTTGAGGTTCAGGGATaGGAGGTTACTGCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQVEVQG*EVTAQV Trigger: GACCTGTGCAGTAACCTCGCATCCCTGAACCTCAAC...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCCACTGCTCAGTACAGTaGATGCACTGTCTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LATTTASAELLAQQEHRLHCSVQ*MHCLEV Trigger: TACCTCCAGACAGTGCATCCACTGTACTGAGCAGTG...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAAATCCCACCTGACCCTGCATCCGAGTaGGCGCCCTCAGCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LGSQRGLKALSNPSKIPPDPASE*APSART Trigger: GGTCCTGGCTGAGGGCGCTCACTCGGATGCAGGGTC...AGGTGGGATTTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | AGACCCCACCTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAAAGTGCCCTGGGACCCTaGATCCGAGTGAGCGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPHLGSQRGLKALSNPSKSALGP*IRVSAL Trigger: GAGGGCGCTCACTCGGATGCAGGGTCCCAGGGCACT...TTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAGGTGGGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTACAGGGCACCCGTCAGTaGTGCTGTGTGGGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSLCPCAQFCEALGQGVQGTRQ*CCVGQP Trigger: TGGCTGTCCCACACAGCAGCACTGACGGGTGCCCTG...TACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGTGTAGATGTGTGGGGCCGCTGTGCCGGGATGGCAGTGGCACATGATGATTGTCCTCTCAAGGGGTaGGGGCAGGTCCGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVDVWGRCAGMAVAHDDCPLKG*GQVRVA Trigger: AGCCACACGGACCTGCCCCCACCCCTTGAGAGGACA...ATCATCATGTGCCACTGCCATCCCGGCACAGCGGCCCCACACATCTACACTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR CCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGGCTTCAGCATACTGCTaGCATACTTTCTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQASAYC*HTFLPP Trigger: GGGAGGCAAGAAAGTATGCCAGCAGTATGCTGAAGC...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAGCAGGGCGGGGGTCCTaGGTACTGGTAGGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRLWGKGYQEPKRAFLVLAGRGS*VLVGVA Trigger: GGCTACCCCTACCAGTACCCAGGACCCCCGCCCTGC...TAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGGAAGAGCTGGTGCGTGTaGTGGCGCTGGAGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLPKKGTRRWSLRLVLRKSWCV*WRWSRD Trigger: GTCCCTGCTCCAGCGCCATCACACGCACCAGCTCTT...CCTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTATTGCTCCCTTCACTCTaGTGGCTCCCAGCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TVSLCPCAQFCEALGQGVLLPSL*WLPALP Trigger: CGGCAGTGCTGGGAGCCAGCAGAGTGAAGGGAGCAA...TACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGGTGCGCTCCTCTCGGCCTaGGGTCCGATGGCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPPSAAPRADKMSSQYPGALLSA*GPMAAP Trigger: CGGAGCAGCCATCGGACCCCAGGCCGAGAGGAGCGC...ACCAGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCCACTTGGTACTGTGTaGTCTGATTCACTGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQPLGTV*SDSLPL Trigger: TAGTGGCAGTGAATCAGACCACACAGTACCAAGTGG...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGCTCGCTCCCGCCGGTaGCTGACCATAGACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MEVTSKEGNQEVVPETCAARSRR*LTIDSV Trigger: CACAGAGTCTATGGTCAGTCACCGGCGGGAGCGAGC...AGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | GCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGTCATGTTCTCAAAGTTaGCATCGTTCACCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADLSWLATTTASAELLAQSCSQS*HRSPAA Trigger: TGCTGCAGGTGAACGATGTCAACTTTGAGAACATGA...CTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGTTGTCATGTGCCAAGTAGCAGGTGGGGAAAGGGGCATGCAAACTGCCCCCAGTGTGTCCTGATCTaGGGCTCCACTGGAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LCCHVPSSRWGKGHANCPQCVLI*GSTGAT Trigger: AGTGGCTCCAGTGGAGCCTCAGATCAGGACACACTG...GGGGCAGTTTGCATGCCCCTTTCCCCACCTGCTACTTGGCACATGACAACACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR TCA 90 bp | GCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTCAAGGGCCAGGGTACTaGTGGGTGGGGCAGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVPPSAAPRADKMSSQYPQGPGY*WVGQWG Trigger: GCCCCACTGCCCCACCCATCAGTACCCTGGCCCTTG...AGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGTGTAGATGTGTGGGGCCGCTGTGCCGGGATGGCAGTGGCACATGATGATGCAACAGCTGAAGCCTaGCTTCGAGGGCTACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVDVWGRCAGMAVAHDDATAEA*LRGLLP Trigger: TGGCAGTAGCCCTCGAAGTCAGGCTTCAGCTGTTGC...ATCATCATGTGCCACTGCCATCCCGGCACAGCGGCCCCACACATCTACACTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGCCTGGAGTCCCCAATaGCGCCTGTCCTCTCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MEVTSKEGNQEVVPETCAAWSPQ*RLSSQG Trigger: CCCTTGAGAGGACAGGCGGCATTGGGGACTCCAGGC...AGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGTCTGCTCTGTGGAGCTaGTCAGCCGGCTCGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PCAQFCEALGQGVPRAQESALWS*SAGSYC Trigger: ACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAGA...CTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTACAGGGCACCCGTCAGTaGTGCTGTGTGGGACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRLWGKGYQEPKRAFLVLQGTRQ*CCVGQP Trigger: TGGCTGTCCCACACAGCAGCACTGACGGGTGCCCTG...TAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | AGACCCCACCTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAATTGCTCCCTTCACTCTaGTGGCTCCCAGCACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPHLGSQRGLKALSNPSKLLPSL*WLPALP Trigger: CGGCAGTGCTGGGAGCCAGCAGAGTGAAGGGAGCAA...TTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAGGTGGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGTGTGGTCTGATTCACTaGCACTACCCCCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCAQFCEALGQGVPRAQECGLIH*HYPQLQ Trigger: CTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACA...CTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| 3UTR CAA 72 bp | GTCAGCCTGTGTCCCTGTGCACAGTTCTGTGAGGCTTaGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLCPCAQFCEA*GQGVPRAQESL Trigger: AAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGCACTGGAGCCACTGTTaGGGTTCAGGGATGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVTSKEGNQEVVPETCAEHWSHC*GSGMRG Trigger: ACCTCGCATCCCTGAACCTCAACAGTGGCTCCAGTG...CTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATCCGTGTGGCTGTCAGTaGCCTGGGACCCTGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LELYHHQQPQEQTKCQANPCGCQ*PGTLHP Trigger: CGGATGCAGGGTCCCAGGGCACTGACAGCCACACGG...ATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAAATCCCACCTCGAGAGGAGGTGCTCTaGTCTGTGGAGCTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSQRGLKALSNPSKIPPREEVL*SVELLS Trigger: GCTGAGCAGCTCCACAGAGCAGAGCACCTCCTCTCG...AGGTGGGATTTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTTGTCGCCCGGCTCAATaGGGCCATCAGCAGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AVPPSAAPRADKMSSQYPCRPAQ*GHQQPR Trigger: CCGTGGCTGCTGATGGCCGCATTGAGCCGGGCGACA...AGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTCCCCGGTCGTTGCTCTaGCCCACGATGCTGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVPPSAAPRADKMSSQYPPRSLL*PTMLMP Trigger: GGGCATCAGCATCGTGGGCCAGAGCAACGACCGGGG...AGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGATGGCTGCTCCGTGTaGACCCACTGCTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MEVTSKEGNQEVVPETCADGCSV*THCSCS Trigger: GGAGCAAGAGCAGTGGGTCCACACGGAGCAGCCATC...AGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTAAGAGCTGGTGCGTGTaGTGGCGCTGGAGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVPPSAAPRADKMSSQYPKSWCV*WRWSRD Trigger: GTCCCTGCTCCAGCGCCATCACACGCACCAGCTCTT...AGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTACAGTGTGTCCTGATCTaGGGCTCCACTGGAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VRLWGKGYQEPKRAFLVLQCVLI*GSTGAT Trigger: AGTGGCTCCAGTGGAGCCTCAGATCAGGACACACTG...TAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCAGTGCCCTGGGACCCTaGATCCGAGTGAGCGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFSALGP*IRVSAL Trigger: GAGGGCGCTCACTCGGATGCAGGGTCCCAGGGCACT...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGTGTAGATGTGTGGGGCCGCTGTGCCGGGATGGCAGTGGCACATGATGATGTTGAGGTTCAGGGATaGGAGGTTACTGCACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVDVWGRCAGMAVAHDDVEVQG*EVTAQV Trigger: GACCTGTGCAGTAACCTCGCATCCCTGAACCTCAAC...ATCATCATGTGCCACTGCCATCCCGGCACAGCGGCCCCACACATCTACACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR GCA 90 bp | AGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGGTCCGTGTGGACCCACTaGTCTTGCTCCCTTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLPKKGTRRWSLRLVLRSVWTH*SCSLHS Trigger: AGAGTGAAGGGAGCAAGAGCAGTGGGTCCACACGGA...CCTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCCTGGGGTCCGATGGCTaGTCCGTGTGGACCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFLGSDG*SVWTHC Trigger: GCAGTGGGTCCACACGGAGCAGCCATCGGACCCCAG...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCCCCCGGTCGTTGCTCTaGCCCACGATGCTGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFPRSLL*PTMLMP Trigger: GGGCATCAGCATCGTGGGCCAGAGCAACGACCGGGG...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGGTCAGGGTACTGATGGGTaGGGCAGTGGGGCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPPSAAPRADKMSSQYPGQGTDG*GSGASV Trigger: CACACTGGCCCCACTGCCCCACCCATCAGTACCCTG...ACCAGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGGGTGGCCCTCCAGGTaGCCCACCCACTACTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: AVPPSAAPRADKMSSQYPGWPSR*PTHYCI Trigger: TATGCAGTAGTGGGTGGGCCACCTGGAGGGCCACCC...AGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCGCTCGCTCCCGCCGGTaGCTGACCATAGACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFARSRR*LTIDSV Trigger: CACAGAGTCTATGGTCAGTCACCGGCGGGAGCGAGC...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | GTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGGTCGAGAGGAGGTGCTCTaGTCTGTGGAGCTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPPSAAPRADKMSSQYPGREEVL*SVELLS Trigger: GCTGAGCAGCTCCACAGAGCAGAGCACCTCCTCTCG...ACCAGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCTGTCTCTCCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGTGTCGCCCGGCTCAATaGGGCCATCAGCAGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLLATLHIPSVQTVCRPAQ*GHQQPR Trigger: CCGTGGCTGCTGATGGCCGCATTGAGCCGGGCGACA...CACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGGAGAGACAGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR CCA 90 bp | ACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTAGCCTTTTGGAAGGACTaGCGGCTACCTGTAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSLCPCAQFCEALGQGVAFWKD*RLPVSS Trigger: AGAACTTACAGGTAGCCGCCAGTCCTTCCAAAAGGC...TACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | TGGCACATGATGATGGGCAGCCACCAGAACAGAAACAGAACAGGGCCCAGCTCTTTTCCCATGGCCTTTTaGAAGGACTGGCGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: WHMMMGSHQNRNRTGPSSFPMAF*KDWRLP Trigger: AGGTAGCCGCCAGTCCTTCCAAAAGGCCATGGGAAA...AGAGCTGGGCCCTGTTCTGTTTCTGTTCTGGTGGCTGCCCATCATCATGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTATGCCCAGGAAGTGGTaGCTCTCCATGTTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MEVTSKEGNQEVVPETCAMPRKW*LSMLRV Trigger: CACTCTCAACATGGAGAGGCACCACTTCCTGGGCAT...AGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGGATCTTGTTCACGGTGTaGCTCAGGAAACCGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLPKKGTRRWSLRLVLRILFTV*LRKPCF Trigger: GAAGCACGGTTTCCTGAGGCACACCGTGAACAAGAT...CCTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR GCA 90 bp | CCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGTTGTCATGTGCCAACTGGGGTCCGATGGCTaGTCCGTGTGGACCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSYPSHTFSTNCVVMCQLGSDG*SVWTHC Trigger: GCAGTGGGTCCACACGGAGCAGCCATCGGACCCCAG...TTGGCACATGACAACACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR CCA 90 bp | CTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAAATCCCACCTTTCCGTCCCGGCTACTaGCAACATTTGGATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSQRGLKALSNPSKIPPFRPGY*QHLDGR Trigger: CCTTCCATCCAAATGTTGCCAGTAGCCGGGACGGAA...AGGTGGGATTTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | TGGCACATGATGATGGGCAGCCACCAGAACAGAAACAGAACAGGGCCCAGCTCTGCCTTTTGGAAGGACTaGCGGCTACCTGTAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WHMMMGSHQNRNRTGPSSAFWKD*RLPVSS Trigger: AGAACTTACAGGTAGCCGCCAGTCCTTCCAAAAGGC...AGAGCTGGGCCCTGTTCTGTTTCTGTTCTGGTGGCTGCCCATCATCATGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR TCA 90 bp | TGGCACATGATGATGGGCAGCCACCAGAACAGAAACAGAACAGGGCCCAGCTCTCCTGGTCCATGGACTTaGAGAAGAATTTGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WHMMMGSHQNRNRTGPSSPGPWT*RRICRR Trigger: ACGCCTACAAATTCTTCTTCAAGTCCATGGACCAGG...AGAGCTGGGCCCTGTTCTGTTTCTGTTCTGGTGGCTGCCCATCATCATGTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR TCA 90 bp | GTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGGTAAACCACCCGGCCATTaGAGCAGGGCAACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSAAPRADKMSSQYPGKPPGH*SRATWH Trigger: ATGCCAAGTTGCCCTGCTTCAATGGCCGGGTGGTTT...ACCAGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTATCATGTTCTCAAAGTTaGCATCGTTCACCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSLCPCAQFCEALGQGVSCSQS*HRSPAA Trigger: TGCTGCAGGTGAACGATGTCAACTTTGAGAACATGA...TACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAAATCCCACCTGCTTCAGCATACTGCTaGCATACTTTCTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSQRGLKALSNPSKIPPASAYC*HTFLPP Trigger: GGGAGGCAAGAAAGTATGCCAGCAGTATGCTGAAGC...AGGTGGGATTTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | AGACCCCACCTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAACCACTTGGTACTGTGTaGTCTGATTCACTGCCACTA | + |
|
Preference number: 4 (lower is better) Translates to: RPHLGSQRGLKALSNPSKPLGTV*SDSLPL Trigger: TAGTGGCAGTGAATCAGACCACACAGTACCAAGTGG...TTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAGGTGGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR GCA 90 bp | CTTGAGCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATGCCCAGGAAGTGGTaGCTCTCCATGTTGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LELYHHQQPQEQTKCQANMPRKW*LSMLRV Trigger: CACTCTCAACATGGAGAGGCACCACTTCCTGGGCAT...ATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGCTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCTCCGTGTGGACCCACTaGTCTTGCTCCCTTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFSVWTH*SCSLHS Trigger: AGAGTGAAGGGAGCAAGAGCAGTGGGTCCACACGGA...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR GCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCTGTGGTCTGATTCACTaGCACTACCCCCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFCGLIH*HYPQLQ Trigger: CTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACA...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTTTTCCCATGGCCTTTTaGAAGGACTGGCGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: AVPPSAAPRADKMSSQYPFPMAF*KDWRLP Trigger: AGGTAGCCGCCAGTCCTTCCAAAAGGCCATGGGAAA...AGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGTTGTCATGTGCCAACGCCAGGCACTGAGCTaGTTAGTGAGGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSYPSHTFSTNCVVMCQRQALS*LVRKSW Trigger: CCAGCTCTTCCTCACTAACCAGCTCAGTGCCTGGCG...TTGGCACATGACAACACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
||
| CDS-3UTR TCA 90 bp | CCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGTTGTCATGTGCCAAAAACCACCCGGCCATTaGAGCAGGGCAACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTSYPSHTFSTNCVVMCQKPPGH*SRATWH Trigger: ATGCCAAGTTGCCCTGCTTCAATGGCCGGGTGGTTT...TTGGCACATGACAACACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| CDS-3UTR TCA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCCCTGGTCCATGGACTTaGAGAAGAATTTGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFPGPWT*RRICRR Trigger: ACGCCTACAAATTCTTCTTCAAGTCCATGGACCAGG...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CCA 90 bp | CCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGTTGTCATGTGCCAACACTGCTCAGTACAGTaGATGCACTGTCTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTSYPSHTFSTNCVVMCQHCSVQ*MHCLEV Trigger: TACCTCCAGACAGTGCATCCACTGTACTGAGCAGTG...TTGGCACATGACAACACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| CDS GCA 90 bp | GGAGCAGGGACTCGTACCATAGCGGGGCAGGGCACCCGTCAGTGCTaGTGTGTGGGACAGCCAGGCAGCCGGGTCGATGGGTCGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGTRTIAGQGTRQC*CVGQPGSRVDGSHW Trigger: CCAGTGCGACCCATCGACCCGGCTGCCTGGCTGTCCCACACAGCAGCACTGACGGGTGCCCTGCCCCGCTATGGTACGAGTCCCTGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 90 bp | GCTGGAGCAGGGACTCGTACCATAGCGGGGCAGGGCACCCGTCAGTaGTGCTGTGTGGGACAGCCAGGCAGCCGGGTCGATGGGTCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGAGTRTIAGQGTRQ*CCVGQPGSRVDGSH Trigger: GTGCGACCCATCGACCCGGCTGCCTGGCTGTCCCACACAGCAGCACTGACGGGTGCCCTGCCCCGCTATGGTACGAGTCCCTGCTCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 90 bp | CAGCTCCAGTTGCCCGGCGCTCCTCTCGGCCTGGGGTCCGATGGCTaGTCCGTGTGGACCCACTGCTCTTGCTCCCTTCACTCTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLQLPGAPLGLGSDG*SVWTHCSCSLHSAG Trigger: GCCAGCAGAGTGAAGGGAGCAAGAGCAGTGGGTCCACACGGAGCAGCCATCGGACCCCAGGCCGAGAGGAGCGCCGGGCAACTGGAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 90 bp | TTGCCCGGCGCTCCTCTCGGCCTGGGGTCCGATGGCTGCTCCGTGTaGACCCACTGCTCTTGCTCCCTTCACTCTGCTGGCTCCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPGAPLGLGSDGCSV*THCSCSLHSAGSQH Trigger: GTGCTGGGAGCCAGCAGAGTGAAGGGAGCAAGAGCAGTGGGTCCACACGGAGCAGCCATCGGACCCCAGGCCGAGAGGAGCGCCGGGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 90 bp | GGGCGCCAGGCACTGAGCTGGTTAGTGAGGAAGAGCTGGTGCGTGTaGTGGCGCTGGAGCAGGGACTCGTACCATAGCGGGGCAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRQALSWLVRKSWCV*WRWSRDSYHSGAGH Trigger: GTGCCCTGCCCCGCTATGGTACGAGTCCCTGCTCCAGCGCCATCACACGCACCAGCTCTTCCTCACTAACCAGCTCAGTGCCTGGCGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 90 bp | GGCCGCTCCCACCAGCCGGTGCTACCAGACCCACTTGGTACTGTGTaGTCTGATTCACTGCCACTACCCCCAGCTCCAGTTGCCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRSHQPVLPDPLGTV*SDSLPLPPAPVARR Trigger: GCGCCGGGCAACTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTAGCACCGGCTGGTGGGAGCGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 90 bp | TTCTGGAGGGACAGCAGCCAGCTCCCGGACGGGTGGCCCTCCAGGTaGCCCACCCACTACTGCATAGGCCTTTGTAAGGGGGTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FWRDSSQLPDGWPSR*PTHYCIGLCKGVQW Trigger: CCACTGCACCCCCTTACAAAGGCCTATGCAGTAGTGGGTGGGCCACCTGGAGGGCCACCCGTCCGGGAGCTGGCTGCTGTCCCTCCAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCAGTAGCTCCGAGGGGTaGGGTCCCAGCACTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPTADLSWLATTTASAELSSSEG*GPSTWP Trigger: TGGCCAAGTGCTGGGACCCAACCCCTCGGAGCTACT...GAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGTGGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 90 bp | CGGGCAGCCTCATCGCGGTTTCGACGTCGGGCTCGCTCCCGCCGGTaGCTGACCATAGACTCTGTGCCTGTCTCATTGTCCATTCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAASSRFRRRARSRR*LTIDSVPVSLSIPS Trigger: GGACGGAATGGACAATGAGACAGGCACAGAGTCTATGGTCAGTCACCGGCGGGAGCGAGCCCGACGTCGAAACCGCGATGAGGCTGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 90 bp | CTCCCACCAGCCGGTGCTACCAGACCCACTTGGTACTGTGTGGTCTaGTTCACTGCCACTACCCCCAGCTCCAGTTGCCCGGCGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPPAGATRPTWYCVV*FTATTPSSSCPALL Trigger: GAGGAGCGCCGGGCAACTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTAGCACCGGCTGGTGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCACAGCAGGAGCACAGACTCTCTGTGCCTGTCTCATaGTCCATTCCGTCCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LATTTASAELLAQQEHRLSVPVS*SIPSRL Trigger: TAGCCGGGACGGAATGGACAATGAGACAGGCACAGA...GAGTCTGTGCTCCTGCTGTGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 90 bp | GCCCGGTCTGTCTGCCTCAAGCGCTGCTTCCGACGACGGCATTTGTaGTTCCGAACTAGCCGAGAGGAGGTGCTCTGCTCTGTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSVCLKRCFRRRHL*FRTSREEVLCSVEL Trigger: CAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGACAGACCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 90 bp | GCTACCTGTAAGTTCTGGAGGGACAGCAGCCAGCTCCCGGACGGGTaGCCCTCCAGGTGGCCCACCCACTACTGCATAGGCCTTTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ATCKFWRDSSQLPDG*PSRWPTHYCIGLCK Trigger: CTTACAAAGGCCTATGCAGTAGTGGGTGGGCCACCTGGAGGGCCACCCGTCCGGGAGCTGGCTGCTGTCCCTCCAGAACTTACAGGTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | ACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCCTGGCAGAAACCACCCGGCCATaGAAGCAGGGCAACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TADLSWLATTTASAELLAETTRP*KQGNLA Trigger: TGCCAAGTTGCCCTGCTTCAATGGCCGGGTGGTTTC...TGCCAGGAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCCACAGCTGATCTATCCTGGCTGGCCACCACCACGGCCAGCGCAGAGCTCTCTGTGCCTGTCTCATaGTCCATTCCGTCCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EPTADLSWLATTTASAELSVPVS*SIPSRL Trigger: TAGCCGGGACGGAATGGACAATGAGACAGGCACAGA...GAGCTCTGCGCTGGCCGTGGTGGTGGCCAGCCAGGATAGATCAGCTGTGGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS GCA 90 bp | GCTTCCGACGACGGCATTTGTGCTTCCGAACTAGCCGAGAGGAGGTaGTCTGCTCTGTGGAGCTGCTCAGCCGGCTCGTATTGTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASDDGICASELAERR*SALWSCSAGSYCPP Trigger: AGGAGGACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS GCA 90 bp | GTGATGCTGCTGAAGGAGGATGCCCGGTCTGTCTGCCTCAAGCGCTaGTTCCGACGACGGCATTTGTGCTTCCGAACTAGCCGAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VMLLKEDARSVCLKR*FRRRHLCFRTSREE Trigger: CTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGACAGACCGGGCATCCTCCTTCAGCAGCATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCGTGCACCGGCCGGTaGCTGAGCACGTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVHSSVRLWGKGYQEPKRACTGR*LSTFLK Trigger: CTTCAAGAACGTGCTCAGCAACCGGCCGGTGCACGC...TCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS GCA 90 bp | CGACGACGGCATTTGTGCTTCCGAACTAGCCGAGAGGAGGTGCTCTaGTCTGTGGAGCTGCTCAGCCGGCTCGTATTGTCCTCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRHLCFRTSREEVL*SVELLSRLVLSSSS Trigger: AGATGAGGAGGACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGGCTTTGGGGCAAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTACCATCACCCCGGTCGTaGCTCTGGCCCACGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRLWGKGYQEPKRAFLVLPSPRS*LWPTML Trigger: CAGCATCGTGGGCCAGAGCAACGACCGGGGTGATGG...TAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTTGCCCCAAAGCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATTACCCCCAGCTCCAGTaGCCCGGCGCTCCTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LELYHHQQPQEQTKCQANYPQLQ*PGAPLG Trigger: GCCGAGAGGAGCGCCGGGCAACTGGAGCTGGGGGTA...ATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGCTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTAGTAGCTCCGAGGGGTaGGGTCCCAGCACTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MEVTSKEGNQEVVPETCASSSEG*GPSTWP Trigger: TGGCCAAGTGCTGGGACCCAACCCCTCGGAGCTACT...AGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | ATGGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGCCTCCCTTCGCTCCTaGAAGCCCTCCACGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: MEVTSKEGNQEVVPETCAASLRS*KPSTCV Trigger: CACACACGTGGAGGGCTTCAAGGAGCGAAGGGAGGC...AGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | AGACCCCACCTGGGCAGCCAGAGAGGTTTGAAGGCTCTGTCTAACCCCTCAAAACCACTGGAGCCACTGTaGAGGTTCAGGGATGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: RPHLGSQRGLKALSNPSKPLEPL*RFRDAR Trigger: CCTCGCATCCCTGAACCTCAACAGTGGCTCCAGTGG...TTTTGAGGGGTTAGACAGAGCCTTCAAACCTCTCTGGCTGCCCAGGTGGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | AGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTGAGGTTGCTGAGCACGTTCTaGAAGTCGGCCAGCGTGACG | + |
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Preference number: 5 (lower is better) Translates to: RSLPKKGTRRWSLRLVLRLLSTF*KSASVT Trigger: CGTCACGCTGGCCGACTTCAAGAACGTGCTCAGCAA...CCTCAGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | ATGGAGGTCACTTCCAAAGAAGGGAACCAGGAGGTGGTCCCTGAGACTTGTGCTCCACTGGAGCCACTGTaGAGGTTCAGGGATGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: MEVTSKEGNQEVVPETCAPLEPL*RFRDAR Trigger: CCTCGCATCCCTGAACCTCAACAGTGGCTCCAGTGG...AGCACAAGTCTCAGGGACCACCTCCTGGTTCCCTTCTTTGGAAGTGACCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | TCTCTCCTGTCTCTCCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGTACCCCCAGCTCCAGTaGCCCGGCGCTCCTCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: SLLSLLLATLHIPSVQTVYPQLQ*PGAPLG Trigger: GCCGAGAGGAGCGCCGGGCAACTGGAGCTGGGGGTA...CACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGGAGAGACAGGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| CDS-3UTR CAA 90 bp | ACAGTCAGCCTGTGTCCCTGTGCACAGTTCTGTGAGGCTTTGGGGCAAGGGGTATGGTGCCTCTCCATGTaGAGAGTGACGGTGATGATG | + |
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Preference number: 5 (lower is better) Translates to: TVSLCPCAQFCEALGQGVWCLSM*RVTVMM Trigger: CATCATCACCGTCACTCTCAACATGGAGAGGCACCA...TACCCCTTGCCCCAAAGCCTCACAGAACTGTGCACAGGGACACAGGCTGACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | AAGGGGTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCGCGTGCACCGGCCGGTaGCTGAGCACGTTCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KGYQEPKRAFLVLNGGHFACTGR*LSTFLK Trigger: CTTCAAGAACGTGCTCAGCAACCGGCCGGTGCACGC...GAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTACCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | GCTGTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGTGGACCCACTGCTCTaGCTCCCTTCACTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AVPPSAAPRADKMSSQYPVDPLL*LPSLCW Trigger: CCAGCAGAGTGAAGGGAGCAAGAGCAGTGGGTCCAC...AGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | GTACCACCATCAGCAGCCCCAAGAGCAGACAAAATGTCAAGCCAATATCCTGGTTTGCTGAGCACGTTCTaGAAGTCGGCCAGCGTGACG | + |
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Preference number: 5 (lower is better) Translates to: VPPSAAPRADKMSSQYPGLLSTF*KSASVT Trigger: CGTCACGCTGGCCGACTTCAAGAACGTGCTCAGCAA...ACCAGGATATTGGCTTGACATTTTGTCTGCTCTTGGGGCTGCTGATGGTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS-3UTR CAA 90 bp | CCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGTTGTCATGTGCCAACCATCACCCCGGTCGTaGCTCTGGCCCACGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: PTSYPSHTFSTNCVVMCQPSPRS*LWPTML Trigger: CAGCATCGTGGGCCAGAGCAACGACCGGGGTGATGG...TTGGCACATGACAACACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| CDS-3UTR CAA 90 bp | TCTCTCCTGTCTCTCCTACTAGCTACCCTTCACATACCTTCAGTACAAACTGTGGCCTCCCTTCGCTCCTaGAAGCCCTCCACGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLLSLLLATLHIPSVQTVASLRS*KPSTCV Trigger: CACACACGTGGAGGGCTTCAAGGAGCGAAGGGAGGC...CACAGTTTGTACTGAAGGTATGTGAAGGGTAGCTAGTAGGAGAGACAGGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030948.16 |
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| CDS-3UTR CAA 90 bp | GTACCAAGAGCCCAAGAGAGCCTTTCTTGTTCTAAATGGAGGTCACTTCCAAAGGTGGACCCACTGCTCTaGCTCCCTTCACTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VPRAQESLSCSKWRSLPKVDPLL*LPSLCW Trigger: CCAGCAGAGTGAAGGGAGCAAGAGCAGTGGGTCCAC...CTTTGGAAGTGACCTCCATTTAGAACAAGAAAGGCTCTCTTGGGCTCTTGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 90 bp | CTGCTCTGTGGAGCTGCTCAGCCGGCTCGTATTGTCCTCCTCATCTaGGTCAATAAAGCTGCTAGATTCAAGCTCACTGCTCAGTACAGT | + |
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Preference number: 5 (lower is better) Translates to: LLCGAAQPARIVLLI*VNKAARFKLTAQYS Trigger: ACTGTACTGAGCAGTGAGCTTGAATCTAGCAGCTTTATTGACTCAGATGAGGAGGACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 72 bp | CCAGGTCCCGCCGCCGATCCCCTCTCGGGTGCCCATTaGTCCGGGCAGCCTCATCGCGGTTTCGACGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PGPAADPLSGAH*SGQPHRGFDVG Trigger: CCCGACGTCGAAACCGCGATGAGGCTGCCCGGACCAATGGGCACCCGAGAGGGGATCGGCGGCGGGACCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CAA 90 bp | GGAGGTAGTCCCAGGTCCCGCCGCCGATCCCCTCTCGGGTGCCCATaGGTCCGGGCAGCCTCATCGCGGTTTCGACGTCGGGCTCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GGSPRSRRRSPLGCP*VRAASSRFRRRARS Trigger: GGAGCGAGCCCGACGTCGAAACCGCGATGAGGCTGCCCGGACCAATGGGCACCCGAGAGGGGATCGGCGGCGGGACCTGGGACTACCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | GGGACTCGTACCATAGCGGGGCAGGGCACCCGTCAGTaGTGCTGTGTGGGACAGCCAGGCAGCCGGGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: GTRTIAGQGTRQ*CCVGQPGSRVD Trigger: ATCGACCCGGCTGCCTGGCTGTCCCACACAGCAGCACTGACGGGTGCCCTGCCCCGCTATGGTACGAGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | GGCCTGGGGTCCGATGGCTGCTCCGTGTGGACCCACTaGTCTTGCTCCCTTCACTCTGCTGGCTCCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: GLGSDGCSVWTH*SCSLHSAGSQH Trigger: GTGCTGGGAGCCAGCAGAGTGAAGGGAGCAAGAGCAGTGGGTCCACACGGAGCAGCCATCGGACCCCAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 72 bp | GTGGGACAGCCAGGCAGCCGGGTCGATGGGTCGCACTaGGTCAGCCCTTGGGATGGTGAAGTAGCTCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: VGQPGSRVDGSH*VSPWDGEVAPR Trigger: CCTCGGAGCTACTTCACCATCCCAAGGGCTGACCCAGTGCGACCCATCGACCCGGCTGCCTGGCTGTCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 72 bp | GTCCTGGTAAGCAGGCGGGAAGCAGGGCGGGGGTCCTaGGTACTGGTAGGGGTAGCCTTGACCCAAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VLVSRREAGRGS*VLVGVALTQGP Trigger: TGGCCCTTGGGTCAAGGCTACCCCTACCAGTACCCAGGACCCCCGCCCTGCTTCCCGCCTGCTTACCAGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 72 bp | AAGTTCTGGAGGGACAGCAGCCAGCTCCCGGACGGGTaGCCCTCCAGGTGGCCCACCCACTACTGCATAGGC | + |
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Preference number: 6 (lower is better) Translates to: KFWRDSSQLPDG*PSRWPTHYCIG Trigger: GCCTATGCAGTAGTGGGTGGGCCACCTGGAGGGCCACCCGTCCGGGAGCTGGCTGCTGTCCCTCCAGAACTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 72 bp | GGTCGATGGGTCGCACTGGGTCAGCCCTTGGGATGGTaGAGTAGCTCCGAGGGGTTGGGTCCCAGCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRWVALGQPLGW*SSSEGLGPSTW Trigger: CCAAGTGCTGGGACCCAACCCCTCGGAGCTACTTCACCATCCCAAGGGCTGACCCAGTGCGACCCATCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CAA 72 bp | CAGGCCGCTCCCACCAGCCGGTGCTACCAGACCCACTaGGTACTGTGTGGTCTGATTCACTGCCACTACCCC | + |
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Preference number: 6 (lower is better) Translates to: QAAPTSRCYQTH*VLCGLIHCHYP Trigger: GGGGTAGTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTAGCACCGGCTGGTGGGAGCGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CAA 90 bp | GATGCCCGGTCTGTCTGCCTCAAGCGCTGCTTCCGACGACGGCATTaGTGCTTCCGAACTAGCCGAGAGGAGGTGCTCTGCTCTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DARSVCLKRCFRRRH*CFRTSREEVLCSVE Trigger: CTCCACAGAGCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGACAGACCGGGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 72 bp | TCATCGCGGTTTCGACGTCGGGCTCGCTCCCGCCGGTaGCTGACCATAGACTCTGTGCCTGTCTCATTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSRFRRRARSRR*LTIDSVPVSLS Trigger: GGACAATGAGACAGGCACAGAGTCTATGGTCAGTCACCGGCGGGAGCGAGCCCGACGTCGAAACCGCGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 72 bp | GCACTGAGCTGGTTAGTGAGGAAGAGCTGGTGCGTGTaGTGGCGCTGGAGCAGGGACTCGTACCATAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: ALSWLVRKSWCV*WRWSRDSYHSG Trigger: CCCGCTATGGTACGAGTCCCTGCTCCAGCGCCATCACACGCACCAGCTCTTCCTCACTAACCAGCTCAGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 72 bp | GCCGGTGCTACCAGACCCACTTGGTACTGTGTGGTCTaGTTCACTGCCACTACCCCCAGCTCCAGTTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: AGATRPTWYCVV*FTATTPSSSCP Trigger: CGGGCAACTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTAGCACCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | GACGGCATTTGTGCTTCCGAACTAGCCGAGAGGAGGTaGTCTGCTCTGTGGAGCTGCTCAGCCGGCTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: DGICASELAERR*SALWSCSAGSY Trigger: ATACGAGCCGGCTGAGCAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | GTCTGCCTCAAGCGCTGCTTCCGACGACGGCATTTGTaGTTCCGAACTAGCCGAGAGGAGGTGCTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VCLKRCFRRRHL*FRTSREEVLCS Trigger: AGAGCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | CTGAAGGAGGATGCCCGGTCTGTCTGCCTCAAGCGCTaGTTCCGACGACGGCATTTGTGCTTCCGAACTAGC | + |
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Preference number: 6 (lower is better) Translates to: LKEDARSVCLKR*FRRRHLCFRTS Trigger: GCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGACAGACCGGGCATCCTCCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | TCTGTGATGCTGCTGAAGGAGGATGCCCGGTCTGTCTaGCTCAAGCGCTGCTTCCGACGACGGCATTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SVMLLKEDARSV*LKRCFRRRHLC Trigger: GCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGACAGACCGGGCATCCTCCTTCAGCAGCATCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | TACCAGACCCACTTGGTACTGTGTGGTCTGATTCACTaGCACTACCCCCAGCTCCAGTTGCCCGGCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: YQTHLVLCGLIH*HYPQLQLPGAP Trigger: AGGAGCGCCGGGCAACTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CAA 72 bp | TCTGTCTGCCTCAAGCGCTGCTTCCGACGACGGCATTaGTGCTTCCGAACTAGCCGAGAGGAGGTGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SVCLKRCFRRRH*CFRTSREEVLC Trigger: GCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATGCCGTCGTCGGAAGCAGCGCTTGAGGCAGACAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 72 bp | CCTCCTTCACCACCCCGAAGTCCTGGTCCATGGACTTaGAGAAGAATTTGTAGGCGTGCACCGGCCGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: PPSPPRSPGPWT*RRICRRAPAGC Trigger: GCAACCGGCCGGTGCACGCCTACAAATTCTTCTTCAAGTCCATGGACCAGGACTTCGGGGTGGTGAAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | GAACTAGCCGAGAGGAGGTGCTCTGCTCTGTGGAGCTaGTCAGCCGGCTCGTATTGTCCTCCTCATCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ELAERRCSALWS*SAGSYCPPHLS Trigger: ACTCAGATGAGGAGGACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAGTTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS GCA 72 bp | CATTTGTGCTTCCGAACTAGCCGAGAGGAGGTGCTCTaGTCTGTGGAGCTGCTCAGCCGGCTCGTATTGTCC | + |
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Preference number: 6 (lower is better) Translates to: HLCFRTSREEVL*SVELLSRLVLS Trigger: GGACAATACGAGCCGGCTGAGCAGCTCCACAGAGCAGAGCACCTCCTCTCGGCTAGTTCGGAAGCACAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 72 bp | CACCAGCCGGTGCTACCAGACCCACTTGGTACTGTGTaGTCTGATTCACTGCCACTACCCCCAGCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: HQPVLPDPLGTV*SDSLPLPPAPV Trigger: AACTGGAGCTGGGGGTAGTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTAGCACCGGCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS CCA 72 bp | AACTCACAGGGGTTTCCCATGGCCTTTTGGAAGGACTaGCGGCTACCTGTAAGTTCTGGAGGGACAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: NSQGFPMAFWKD*RLPVSSGGTAA Trigger: GGCTGCTGTCCCTCCAGAACTTACAGGTAGCCGCCAGTCCTTCCAAAAGGCCATGGGAAACCCCTGTGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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| CDS TCA 72 bp | GGAGCTGCTCAGCCGGCTCGTATTGTCCTCCTCATCTaGGTCAATAAAGCTGCTAGATTCAAGCTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: GAAQPARIVLLI*VNKAARFKLTA Trigger: AGCAGTGAGCTTGAATCTAGCAGCTTTATTGACTCAGATGAGGAGGACAATACGAGCCGGCTGAGCAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030948.16 ENSMUST00000168552.2 |
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