Pregenerated sensors for DUXBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048502Ensembl transcript IDs: ENSMUST00000049793.9, ENSMUST00000172667.8, ENSMUST00000173155.8, ENSMUST00000173580.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCAGGCTGTGTTCTAGATTTCTTAGACTACAGTCAGAGGTGAGGTaGGGGCTAGGTAAGCAGACATCCCATGCTGGGAGGATGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: CRLCSRFLRLQSEVR*GLGKQTSHAGRMLR Trigger: CCTCAGCATCCTCCCAGCATGGGATGTCTGCTTACCTAGCCCTCACCTCACCTCTGACTGTAGTCTAAGAAATCTAGAACACAGCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR CCA 90 bp | TCGCCCTCTGGGGCTCAGTTTACAGTAGTTCCAAGGACTGTGTTCTaGAAACAAGAGTGGCTTTACACACTGTCACCTAACTGCTCTATT | + |
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Preference number: 1 (lower is better) Translates to: SPSGAQFTVVPRTVF*KQEWLYTLSPNCSI Trigger: AATAGAGCAGTTAGGTGACAGTGTGTAAAGCCACTCTTGTTTCCAGAACACAGTCCTTGGAACTACTGTAAACTGAGCCCCAGAGGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR CCA 90 bp | GGTCAGGACCCACCTAAAACCTCTACAGATTTCAAACAGCACCATTaGCTGAGAGGCAAGATTTCAGAACATGAATTTGTGAGAGACACT | + |
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Preference number: 1 (lower is better) Translates to: GQDPPKTSTDFKQHH*LRGKISEHEFVRDT Trigger: AGTGTCTCTCACAAATTCATGTTCTGAAATCTTGCCTCTCAGCCAATGGTGCTGTTTGAAATCTGTAGAGGTTTTAGGTGGGTCCTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTACGTGGGGACCTGGGTaGCGAAGGAAGAGATCTTTT | + |
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Preference number: 2 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSTWGPG*RRKRSF Trigger: AAAAGATCTCTTCCTTCGGCACCCAGGTCCCCACGT...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCGGCAGGAAATTGACTTaGGCACAGGAGTTCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: TFKVPPWPAPAGQDPPKTGRKLT*AQEFKT Trigger: GGTCTTGAACTCCTGTGCTCAAGTCAATTTCCTGCC...GGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTAACAGCACCATTGGCTaGGAGGCAAGATTTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LSRYHPGLHLPVRTHLKPNSTIG*EARFQN Trigger: GTTCTGAAATCTTGCCTCTCAGCCAATGGTGCTGTT...AGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCAGGGTGAATTTCTGCTTACCAAGAGGCTCCTAAGAAGGTGGAGCTCCAGCACCCTCGCCCTCTaGGGCTCAGTTTACAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: QRQGEFLLTKRLLRRWSSSTLAL*GSVYSS Trigger: ACTACTGTAAACTGAGCCCCAGAGGGCGAGGGTGCT...GGAGCTCCACCTTCTTAGGAGCCTCTTGGTAAGCAGAAATTCACCCTGCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGTTCACCCATCTCCATAATACACACAGAACGGGGACTCTCAGTGCAGGCTATGCTGGGAGGATGCTaGGGTGTCTGGGTGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: RSSPISIIHTERGLSVQAMLGGC*GVWVLT Trigger: AGTTAGCACCCAGACACCTCAGCATCCTCCCAGCAT...AGCCTGCACTGAGAGTCCCCGTTCTGTGTGTATTATGGAGATGGGTGAACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTTTCCTGAAAAACCTGTaGTCAAGAGGAATGAACGGA | + |
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Preference number: 2 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSFLKNL*SRGMNG Trigger: TCCGTTCATTCCTCTTGAGCACAGGTTTTTCAGGAA...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGTGCTAACTAACATCCTAAGACACAGAGTAGCACCCTCGCCCTCTGGGCCAAGGACTGTGTTCTaGAAACAAGAGTGGCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: VWVLTNILRHRVAPSPSGPRTVF*KQEWLY Trigger: GTAAAGCCACTCTTGTTTCCAGAACACAGTCCTTGG...CCCAGAGGGCGAGGGTGCTACTCTGTGTCTTAGGATGTTAGTTAGCACCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTACAAGATTTCAGAACATaGATTTGTGAGAGACACTTC | + |
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Preference number: 2 (lower is better) Translates to: SRYHPGLHLPVRTHLKPLQDFRT*ICERHF Trigger: GAAGTGTCTCTCACAAATTCATGTTCTGAAATCTTG...TAGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAGTAGAGTCTACCTTCCACATCTCCATCACGTCCCAATAACCCATTTGTTCTCAGAGGCAGGGTaGATTTCTGCTTACCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: PPSRVYLPHLHHVPITHLFSEAG*ISAYQE Trigger: CTCTTGGTAAGCAGAAATTCACCCTGCCTCTGAGAA...CAAATGGGTTATTGGGACGTGATGGAGATGTGGAAGGTAGACTCTACTGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR-3UTR CCA 90 bp | AACTTGATCTTGTTCCCTAATTCTGCATGCCTACTCTTCAGTATAGCCACTGATATCCACGTGGGGACCTaGGTGCCGAAGGAAGAGATC | + |
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Preference number: 2 (lower is better) Translates to: NLILFPNSACLLFSIATDIHVGT*VPKEEI Trigger: GATCTCTTCCTTCGGCACCCAGGTCCCCACGTGGAT...ATCAGTGGCTATACTGAAGAGTAGGCATGCAGAATTAGGGAACAAGATCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCCACCTGTCTCTTATGTTTGCTAAACAGAAGCAAAGATAAGGGGACACAGGCACATGGTCATGGGTaGAATAATACTGCGGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: DSTCLLCLLNRSKDKGTQAHGHG*NNTAVG Trigger: TCCAACCGCAGTATTATTTCACCCATGACCATGTGC...CTGTGTCCCCTTATCTTTGCTTCTGTTTAGCAAACATAAGAGACAGGTGGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR-3UTR CCA 90 bp | GATTCCACCTGTCTCTTATGTTTGCTAAACAGAAGCAAAGATAAGGGGACACAGTTAGCTCAGAGCTCTTaGGATCTAAGGAGCTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: DSTCLLCLLNRSKDKGTQLAQSS*DLRSSR Trigger: CCTAGAGCTCCTTAGATCCCAAGAGCTCTGAGCTAA...CTGTGTCCCCTTATCTTTGCTTCTGTTTAGCAAACATAAGAGACAGGTGGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR CAA 90 bp | CCCCCTTTTTGTGTCCATGTGGTTTATGCACATACTAACTTGATCTaGTTCCCTAATTCTGCATGCCTACTCTTCAGTATAGCCACTGAT | + |
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Preference number: 2 (lower is better) Translates to: PPFCVHVVYAHTNLI*FPNSACLLFSIATD Trigger: ATCAGTGGCTATACTGAAGAGTAGGCATGCAGAATTAGGGAACAAGATCAAGTTAGTATGTGCATAAACCACATGGACACAAAAAGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR CCA 90 bp | GATTCCACCTGTCTCTTATGTTTGCTAAACAGAAGCAAAGATAAGGGGACACAGTTCTGGAAACAAGAGTaGCTTTACACACTGTCACCT | + |
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Preference number: 2 (lower is better) Translates to: DSTCLLCLLNRSKDKGTQFWKQE*LYTLSP Trigger: AGGTGACAGTGTGTAAAGCCACTCTTGTTTCCAGAA...CTGTGTCCCCTTATCTTTGCTTCTGTTTAGCAAACATAAGAGACAGGTGGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTATTTCAAACAGCACCATaGGCTGAGAGGCAAGATTTC | + |
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Preference number: 3 (lower is better) Translates to: SRYHPGLHLPVRTHLKPLFQTAP*AERQDF Trigger: GAAATCTTGCCTCTCAGCCAATGGTGCTGTTTGAAA...TAGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR-3UTR CAA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTCATACTAACTTGATCTaGTTCCCTAATTCTGCATGC | + |
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Preference number: 3 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSHTNLI*FPNSAC Trigger: GCATGCAGAATTAGGGAACAAGATCAAGTTAGTATG...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| 3UTR TCA 72 bp | AGCACTGATGGAGGAATCAAGTTCTCAGAGGCAGGGTaGATTTCTGCTTACCAAGAGGCTCCTAAGAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: STDGGIKFSEAG*ISAYQEAPKKV Trigger: CACCTTCTTAGGAGCCTCTTGGTAAGCAGAAATTCACCCTGCCTCTGAGAACTTGATTCCTCCATCAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR CCA 72 bp | GGGGCTCAGTTTACAGTAGTTCCAAGGACTGTGTTCTaGAAACAAGAGTGGCTTTACACACTGTCACCTAAC | + |
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Preference number: 3 (lower is better) Translates to: GAQFTVVPRTVF*KQEWLYTLSPN Trigger: GTTAGGTGACAGTGTGTAAAGCCACTCTTGTTTCCAGAACACAGTCCTTGGAACTACTGTAAACTGAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR TCA 72 bp | CCTCACCTCACCGAAACACCTGGAGATGAGCTTGACTaGTCTGTGTTTCTCAATCTAACTAAGTTGACAATC | + |
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Preference number: 3 (lower is better) Translates to: PHLTETPGDELD*SVFLNLTKLTI Trigger: GATTGTCAACTTAGTTAGATTGAGAAACACAGATCAGTCAAGCTCATCTCCAGGTGTTTCGGTGAGGTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| 3UTR GCA 72 bp | GCACATACTAACTTGATCTTGTTCCCTAATTCTGCATaGCTACTCTTCAGTATAGCCACTGATTTCACGCCC | + |
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Preference number: 3 (lower is better) Translates to: AHTNLILFPNSA*LLFSIATDFTP Trigger: GGGCGTGAAATCAGTGGCTATACTGAAGAGTAGGCATGCAGAATTAGGGAACAAGATCAAGTTAGTATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTACAACCTGGGAGGACTaGAGTAGTGTGGTCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSTTWED*SSVVPG Trigger: ACCAGGGACCACACTACTTCAGTCCTCCCAGGTTGT...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CCA 90 bp | TCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTAGGCCCATTTGGAGTGTaGGGTGGAGAAAGAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SRYHPGLHLPVRTHLKPLGPFGV*GGERGS Trigger: ACTGCCTCTTTCTCCACCCCACACTCCAAATGGGCC...TAGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | CTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTAGCTGTAAAGGAGGCTaGGAATGGAAGCCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSRYHPGLHLPVRTHLKPSCKGG*EWKPCS Trigger: AGAGCAGGGCTTCCATTCTCAGCCTCCTTTACAGCT...AGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTAAGAGGCAGTATAACTaGAGCGCTGCTGGTGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSKRQYN*SAAGES Trigger: ACTCTCACCAGCAGCGCTTCAGTTATACTGCCTCTT...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CCA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTCTGACTGCTCTGGGGTaGATGAGGAGTTTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSLTALG*MRSFLS Trigger: ACTCAGAAAACTCCTCATCCACCCCAGAGCAGTCAG...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CCA 90 bp | CTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTATCCAAAGGCCCATTTaGAGTGTGGGGTGGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSRYHPGLHLPVRTHLKPIQRPI*SVGWRK Trigger: CTTTCTCCACCCCACACTCCAAATGGGCCTTTGGAT...AGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR GCA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTTCCTGGATTCTGGGATaGCTGTTTGTTGAGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSSWILG*LFVEPV Trigger: AACTGGCTCAACAAACAGGCATCCCAGAATCCAGGA...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR GCA 90 bp | ACTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCGGTTTATCCTGCTCCTaGTCTTGGCTTTCTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: TFKVPPWPAPAGQDPPKTGLSCS*SWLSSE Trigger: TTCTGAAGAAAGCCAAGAGCAGGAGCAGGATAAACC...GGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR GCA 90 bp | ACTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTGGAACTTTGTGAAGTaGGTTCTGCTCCTTCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: TFKVPPWPAPAGQDPPKTWNFVK*VLLLLA Trigger: AGCTAGAAGGAGCAGAACGCACTTCACAAAGTTCCA...GGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CCA 90 bp | ACTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCCACTCGTCCCAGTGTTaGAGAAAGGAGGAATCATTT | + |
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Preference number: 4 (lower is better) Translates to: TFKVPPWPAPAGQDPPKTHSSQC*RKEESF Trigger: AAATGATTCCTCCTTTCTCCAACACTGGGACGAGTG...GGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | TCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTACGAAGAGTGTCCTTTTaGCTCTGGGTTAGAATGATT | + |
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Preference number: 4 (lower is better) Translates to: SRYHPGLHLPVRTHLKPLRRVSF*LWVRMI Trigger: AATCATTCTAACCCAGAGTCAAAAGGACACTCTTCG...TAGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | TCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTAAACCAAGTCATAATTTaGGACTCAGAGATGCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: SRYHPGLHLPVRTHLKPLNQVII*DSEMPS Trigger: ACTCGGCATCTCTGAGTCTCAAATTATGACTTGGTT...TAGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAGGGTGAATTTCTGCTTACCAAGAGGCTCCTAAGAAGGTGGAGCTCCTCTGCAGGTCTGATGTaGCTGTTTCTCCAGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: QRQGEFLLTKRLLRRWSSSAGLM*LFLQTV Trigger: GACAGTCTGGAGAAACAGTCACATCAGACCTGCAGA...GGAGCTCCACCTTCTTAGGAGCCTCTTGGTAAGCAGAAATTCACCCTGCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR GCA 90 bp | AAAAACCTGTGCTCAAGAGGAATGAACGGAAAAGGCTTGAGGCTTAAACCTACTGACACGCTGGCAAGCTaGCGCAGCTGCACCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KNLCSRGMNGKGLRLKPTDTLAS*RSCTCH Trigger: GTGGCAGGTGCAGCTGCGGCAGCTTGCCAGCGTGTC...AGTAGGTTTAAGCCTCAAGCCTTTTCCGTTCATTCCTCTTGAGCACAGGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | CTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCCTTTATTGGGATTTTaGTCATCACTCCTTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSRYHPGLHLPVRTHLKPPLLGF*SSLLCC Trigger: ACAGCAAAGGAGTGATGATCAAAATCCCAATAAAGG...AGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR GCA 90 bp | ACTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCCATGCAAACTCTGCTTaGTTCCGTATTTTTCTATGC | + |
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Preference number: 4 (lower is better) Translates to: TFKVPPWPAPAGQDPPKTHANSA*FRIFLC Trigger: GCATAGAAAAATACGGAAGCAAGCAGAGTTTGCATG...GGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR GCA 90 bp | CTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTACAGCATGCAAACTCTaGTTGCTTCCGTATTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSRYHPGLHLPVRTHLKPTACKL*LLPYFS Trigger: AGAAAAATACGGAAGCAAGCAGAGTTTGCATGCTGT...AGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAGGGTGAATTTCTGCTTACCAAGAGGCTCCTAAGAAGGTGGAGCTCCTGGAACTTTGTGAAGTaGGTTCTGCTCCTTCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QRQGEFLLTKRLLRRWSSWNFVK*VLLLLA Trigger: AGCTAGAAGGAGCAGAACGCACTTCACAAAGTTCCA...GGAGCTCCACCTTCTTAGGAGCCTCTTGGTAAGCAGAAATTCACCCTGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CCA 90 bp | CTAACTAACATCCTAAGACACAGAGTAGCACCCTCGCCCTCTGGGGCTCAGTTTATGAATCCTGGATTCTaGGATGCCTGTTTGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTNILRHRVAPSPSGAQFMNPGF*DACLLS Trigger: GCTCAACAAACAGGCATCCCAGAATCCAGGATTCAT...AAACTGAGCCCCAGAGGGCGAGGGTGCTACTCTGTGTCTTAGGATGTTAGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CCA 90 bp | TCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTAATAAGTGACCTTTATTaGGATTTTGATCATCACTCC | + |
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Preference number: 4 (lower is better) Translates to: SRYHPGLHLPVRTHLKPLISDLY*DFDHHS Trigger: GGAGTGATGATCAAAATCCCAATAAAGGTCACTTAT...TAGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | AAAAACCTGTGCTCAAGAGGAATGAACGGAAAAGGCTTGAGGCTTAAACCTACTCCTGGTAACTGCTTCTaGCGGCCCTTAGAGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: KNLCSRGMNGKGLRLKPTPGNCF*RPLERS Trigger: GGATCTCTCTAAGGGCCGTCAGAAGCAGTTACCAGG...AGTAGGTTTAAGCCTCAAGCCTTTTCCGTTCATTCCTCTTGAGCACAGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | ACCTGTCTCTTATGTTTGCTAAACAGAAGCAAAGATAAGGGGACACAGGCTAACGCACAGGGACAACCATaGGTAGCCTGGCTTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TCLLCLLNRSKDKGTQANAQGQP*VAWLCP Trigger: TGGACAAAGCCAGGCTACTCATGGTTGTCCCTGTGC...GTTAGCCTGTGTCCCCTTATCTTTGCTTCTGTTTAGCAAACATAAGAGACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR GCA 90 bp | CCTCCCAGTAGAGTCTACCTTCCACATCTCCATCACGTCCCAATAACCCATTTGGGTTTATCCTGCTCCTaGTCTTGGCTTTCTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PPSRVYLPHLHHVPITHLGLSCS*SWLSSE Trigger: TTCTGAAGAAAGCCAAGAGCAGGAGCAGGATAAACC...CAAATGGGTTATTGGGACGTGATGGAGATGTGGAAGGTAGACTCTACTGGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR GCA 90 bp | AAAAACCTGTGCTCAAGAGGAATGAACGGAAAAGGCTTGAGGCTTAAACCTACTCTACGGAGTTTGGTGTaGTTGAGGAGACACGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNLCSRGMNGKGLRLKPTLRSLV*LRRHAG Trigger: GCCAGCGTGTCTCCTCAAGCACACCAAACTCCGTAG...AGTAGGTTTAAGCCTCAAGCCTTTTCCGTTCATTCCTCTTGAGCACAGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR GCA 90 bp | CCTCCCAGTAGAGTCTACCTTCCACATCTCCATCACGTCCCAATAACCCATTTGCCAGAGACAGAGAGATaGACAACGTACATGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSRVYLPHLHHVPITHLPETER*TTYMNP Trigger: AGGATTCATGTACGTTGTGCATCTCTCTGTCTCTGG...CAAATGGGTTATTGGGACGTGATGGAGATGTGGAAGGTAGACTCTACTGGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR TCA 90 bp | AACTTGATCTTGTTCCCTAATTCTGCATGCCTACTCTTCAGTATAGCCACTGATCTGAAGCGCTGCTGGTaGGAGTTTTGGAAGGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NLILFPNSACLLFSIATDLKRCW*EFWKER Trigger: TCGCTCCTTCCAAAACTCTCACCAGCAGCGCTTCAG...ATCAGTGGCTATACTGAAGAGTAGGCATGCAGAATTAGGGAACAAGATCAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | CATCTCCATCACGTCCCAATAACCCATTTGGATTTTGAACAGATTCCTCGACGTGATGCACAACGTACATaGATCCTGGATTCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLHHVPITHLDFEQIPRRDAQRT*ILDSGM Trigger: CATCCCAGAATCCAGGATTCATGTACGTTGTGCATC...ACGTCGAGGAATCTGTTCAAAATCCAAATGGGTTATTGGGACGTGATGGAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR GCA 90 bp | CAGAACGGGGACTCTCAGTGCAGGCTGTGTTCTAGATTTCTTAGACTACAGTCACATGCAAACTCTGCTTaGTTCCGTATTTTTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: QNGDSQCRLCSRFLRLQSHANSA*FRIFLC Trigger: GCATAGAAAAATACGGAAGCAAGCAGAGTTTGCATG...TGACTGTAGTCTAAGAAATCTAGAACACAGCCTGCACTGAGAGTCCCCGTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR GCA 90 bp | AGCACAATGACTGATCCAAAGGTAGGATTATCTAAGGATGCTTCAGAAGTTCACTCCTGGATTCTGGGATaGCTGTTTGTTGAGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STMTDPKVGLSKDASEVHSWILG*LFVEPV Trigger: AACTGGCTCAACAAACAGGCATCCCAGAATCCAGGA...GTGAACTTCTGAAGCATCCTTAGATAATCCTACCTTTGGATCAGTCATTGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR GCA 90 bp | AACTTGATCTTGTTCCCTAATTCTGCATGCCTACTCTTCAGTATAGCCACTGATTTCTTCAGAACAGCATaGAAACTCTGCTTGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLILFPNSACLLFSIATDFFRTA*KLCLLP Trigger: CGGAAGCAAGCAGAGTTTGCATGCTGTTCTGAAGAA...ATCAGTGGCTATACTGAAGAGTAGGCATGCAGAATTAGGGAACAAGATCAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CCA 90 bp | AACTTGATCTTGTTCCCTAATTCTGCATGCCTACTCTTCAGTATAGCCACTGATATGAATCCTGGATTCTaGGATGCCTGTTTGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLILFPNSACLLFSIATDMNPGF*DACLLS Trigger: GCTCAACAAACAGGCATCCCAGAATCCAGGATTCAT...ATCAGTGGCTATACTGAAGAGTAGGCATGCAGAATTAGGGAACAAGATCAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR TCA 90 bp | AGCACAATGACTGATCCAAAGGTAGGATTATCTAAGGATGCTTCAGAAGTTCACCGAAGAGTGTCCTTTTaGCTCTGGGTTAGAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: STMTDPKVGLSKDASEVHRRVSF*LWVRMI Trigger: AATCATTCTAACCCAGAGTCAAAAGGACACTCTTCG...GTGAACTTCTGAAGCATCCTTAGATAATCCTACCTTTGGATCAGTCATTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR TCA 90 bp | AGCACAATGACTGATCCAAAGGTAGGATTATCTAAGGATGCTTCAGAAGTTCACAACCAAGTCATAATTTaGGACTCAGAGATGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: STMTDPKVGLSKDASEVHNQVII*DSEMPS Trigger: ACTCGGCATCTCTGAGTCTCAAATTATGACTTGGTT...GTGAACTTCTGAAGCATCCTTAGATAATCCTACCTTTGGATCAGTCATTGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR GCA 90 bp | GATTCCACCTGTCTCTTATGTTTGCTAAACAGAAGCAAAGATAAGGGGACACAGACAGCATGCAAACTCTaGTTGCTTCCGTATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTCLLCLLNRSKDKGTQTACKL*LLPYFS Trigger: AGAAAAATACGGAAGCAAGCAGAGTTTGCATGCTGT...CTGTGTCCCCTTATCTTTGCTTCTGTTTAGCAAACATAAGAGACAGGTGGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CCA 90 bp | AAAAACCTGTGCTCAAGAGGAATGAACGGAAAAGGCTTGAGGCTTAAACCTACTAAGGAGGAATCATTTTaGTCTAGTTTCCGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLCSRGMNGKGLRLKPTKEESF*SSFRKC Trigger: ACACTTCCGGAAACTAGACCAAAATGATTCCTCCTT...AGTAGGTTTAAGCCTCAAGCCTTTTCCGTTCATTCCTCTTGAGCACAGGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
||
| 3UTR CAA 72 bp | TGTGTCCATGTGGTTTATGCACATACTAACTTGATCTaGTTCCCTAATTCTGCATGCCTACTCTTCAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: CVHVVYAHTNLI*FPNSACLLFSI Trigger: TATACTGAAGAGTAGGCATGCAGAATTAGGGAACAAGATCAAGTTAGTATGTGCATAAACCACATGGACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CAA 90 bp | CTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTGATCCAAAGGCCCATTaGGAGTGTGGGGTGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSRYHPGLHLPVRTHLKPDPKAH*ECGVEK Trigger: TTTCTCCACCCCACACTCCAAATGGGCCTTTGGATC...AGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CAA 90 bp | TTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTTGGGATGCCTGTTTGTaGAGCCAGTTTTTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FKVPPWPAPAGQDPPKTSWDACL*SQFFPG Trigger: ACCAGGGAAAAACTGGCTCAACAAACAGGCATCCCA...AGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS CCA 90 bp | GTCCATCAACAGCTCGGGAGAAAAGCGGCTTGTGGTAAGGACACGTaGGCTGCCAGAGACAGAGAGATGCACAACGTACATGAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHQQLGRKAACGKDT*AARDREMHNVHESW Trigger: CCAGGATTCATGTACGTTGTGCATCTCTCTGTCTCTGGCAGCCCACGTGTCCTTACCACAAGCCGCTTTTCTCCCGAGCTGTTGATGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CAA 90 bp | GTCTGGGTGCTAACTAACATCCTAAGACACAGAGTAGCACCCTCGCCCTCTGGGTGGGATGCCTGTTTGTaGAGCCAGTTTTTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VWVLTNILRHRVAPSPSGWDACL*SQFFPG Trigger: ACCAGGGAAAAACTGGCTCAACAAACAGGCATCCCA...CCCAGAGGGCGAGGGTGCTACTCTGTGTCTTAGGATGTTAGTTAGCACCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS TCA 90 bp | CAAAGGCCCATTTGGAGTGTGGGGTGGAGAAAGAGGCAGTATAACTaGAGCGCTGCTGGTGAGAGTTTTGGAAGGAGCGAGTTTACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QRPIWSVGWRKRQYN*SAAGESFGRSEFTH Trigger: GTGGGTAAACTCGCTCCTTCCAAAACTCTCACCAGCAGCGCTTCAGTTATACTGCCTCTTTCTCCACCCCACACTCCAAATGGGCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS CCA 90 bp | CTGACTGCTCTGGGGTGGATGAGGAGTTTTCTGAGTGTTCTGTCCTaGGTCTGGGTGCCGTGCTCTCCGGTTCTGAAACCATATATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTALGWMRSFLSVLS*VWVPCSPVLKPYMN Trigger: ATTCATATATGGTTTCAGAACCGGAGAGCACGGCACCCAGACCCAGGACAGAACACTCAGAAAACTCCTCATCCACCCCAGAGCAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049793.9 ENSMUST00000173580.8 |
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| CDS-3UTR CAA 90 bp | TCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCTCTAGTAGCTAGATCAGGATaGGGATTCTTTTCAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SRYHPGLHLPVRTHLKPLVARSG*GFFSNH Trigger: GTGGTTTGAAAAGAATCCCAATCCTGATCTAGCTAC...TAGAGGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CAA 90 bp | ACTTTCAAGGTACCACCCTGGCCTGCACCTGCCGGTCAGGACCCACCTAAAACCGCATGCAAACTCTGCTaGCTTCCGTATTTTTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: TFKVPPWPAPAGQDPPKTACKLC*LPYFSM Trigger: CATAGAAAAATACGGAAGCAAGCAGAGTTTGCATGC...GGTTTTAGGTGGGTCCTGACCGGCAGGTGCAGGCCAGGGTGGTACCTTGAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS TCA 90 bp | CTGGGATTATGCCCTCTGTTTTGGGTTAGGAGCTGTAAAGGAGGCTaGGAATGGAAGCCCTGCTCTCCTGGAGTTGTTGTCGGTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLCPLFWVRSCKGG*EWKPCSPGVVVGDK Trigger: CTTATCACCGACAACAACTCCAGGAGAGCAGGGCTTCCATTCTCAGCCTCCTTTACAGCTCCTAACCCAAAACAGAGGGCATAATCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS TCA 90 bp | AACACCAAGTATTTACATCCCGTGTCTAGAGCACAGGGACAACCATaGGTAGCCTGGCTTTGTCCATCAACAGCTCGGGAGAAAAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: NTKYLHPVSRAQGQP*VAWLCPSTAREKSG Trigger: GCCGCTTTTCTCCCGAGCTGTTGATGGACAAAGCCAGGCTACTCATGGTTGTCCCTGTGCTCTAGACACGGGATGTAAATACTTGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CAA 90 bp | GTCTGGGTGCTAACTAACATCCTAAGACACAGAGTAGCACCCTCGCCCTCTGGGAAACCAAGTCATAATTaGAGACTCAGAGATGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VWVLTNILRHRVAPSPSGKPSHN*RLRDAE Trigger: CTCGGCATCTCTGAGTCTCAAATTATGACTTGGTTT...CCCAGAGGGCGAGGGTGCTACTCTGTGTCTTAGGATGTTAGTTAGCACCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CAA 90 bp | CATCCTAAGACACAGAGTAGCACCCTAAGTAGCATCCTAAGACACAGAGTAGCATTCTGGGATGCCTGTTaGTTGAGCCAGTTTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPKTQSSTLSSILRHRVAFWDAC*LSQFFP Trigger: AGGGAAAAACTGGCTCAACAAACAGGCATCCCAGAA...TGCTACTCTGTGTCTTAGGATGCTACTTAGGGTGCTACTCTGTGTCTTAGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAGGCAAGATTTCAGAACATGAATTTGTGAGAGACACTTCAGCTTTGAAACGGAGTTTGGTGTGCTaGAGGAGACACGCTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRGKISEHEFVRDTSALKRSLVC*RRHAGK Trigger: CTTGCCAGCGTGTCTCCTCAAGCACACCAAACTCCG...TTTCAAAGCTGAAGTGTCTCTCACAAATTCATGTTCTGAAATCTTGCCTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS GCA 90 bp | AAGTGCGTTCTGCTCCTTCTAGCTTCTTTAACTCTAGGTTTATCCTaGTCCTGCTCTTGGCTTTCTTCAGAACAGCATGCAAACTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KCVLLLLASLTLGLS*SCSWLSSEQHANSA Trigger: AGCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAGCAGGAGCAGGATAAACCTAGAGTTAAAGAAGCTAGAAGGAGCAGAACGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS CCA 90 bp | CTCCTTCTAGCTTCTTTAACTCTAGGTTTATCCTGCTCCTGCTCTTaGCTTTCTTCAGAACAGCATGCAAACTCTGCTTGCTTCCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: LLLASLTLGLSCSCS*LSSEQHANSACFRI Trigger: AATACGGAAGCAAGCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAGCAGGAGCAGGATAAACCTAGAGTTAAAGAAGCTAGAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS-3UTR CAA 90 bp | CATCCTAAGACACAGAGTAGCACCCTAAGTAGCATCCTAAGACACAGAGTAGCAGTAGCTAGATCAGGATaGGGATTCTTTTCAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HPKTQSSTLSSILRHRVAVARSG*GFFSNH Trigger: GTGGTTTGAAAAGAATCCCAATCCTGATCTAGCTAC...TGCTACTCTGTGTCTTAGGATGCTACTTAGGGTGCTACTCTGTGTCTTAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAGGCAAGATTTCAGAACATGAATTTGTGAGAGACACTTCAGCTTTGAAACTGCTGGTGAGAGTTTaGGAAGGAGCGAGTTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: LRGKISEHEFVRDTSALKLLVRV*EGASLP Trigger: GGGTAAACTCGCTCCTTCCAAAACTCTCACCAGCAG...TTTCAAAGCTGAAGTGTCTCTCACAAATTCATGTTCTGAAATCTTGCCTCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CAA 90 bp | AAAAACCTGTGCTCAAGAGGAATGAACGGAAAAGGCTTGAGGCTTAAACCTACTAAACCAAGTCATAATTaGAGACTCAGAGATGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KNLCSRGMNGKGLRLKPTKPSHN*RLRDAE Trigger: CTCGGCATCTCTGAGTCTCAAATTATGACTTGGTTT...AGTAGGTTTAAGCCTCAAGCCTTTTCCGTTCATTCCTCTTGAGCACAGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CAA 90 bp | CTGAGAGGCAAGATTTCAGAACATGAATTTGTGAGAGACACTTCAGCTTTGAAATTCTGGGATGCCTGTTaGTTGAGCCAGTTTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRGKISEHEFVRDTSALKFWDAC*LSQFFP Trigger: AGGGAAAAACTGGCTCAACAAACAGGCATCCCAGAA...TTTCAAAGCTGAAGTGTCTCTCACAAATTCATGTTCTGAAATCTTGCCTCTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS-3UTR CAA 90 bp | AAAAACCTGTGCTCAAGAGGAATGAACGGAAAAGGCTTGAGGCTTAAACCTACTACCTTTATTGGGATTTaGATCATCACTCCTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNLCSRGMNGKGLRLKPTTFIGI*IITPLL Trigger: CAGCAAAGGAGTGATGATCAAAATCCCAATAAAGGT...AGTAGGTTTAAGCCTCAAGCCTTTTCCGTTCATTCCTCTTGAGCACAGGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS GCA 90 bp | TTCTCAAAAGCTTCAATTAGAATATCAGTCTGGAACTTTGTGAAGTaGGTTCTGCTCCTTCTAGCTTCTTTAACTCTAGGTTTATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSKASIRISVWNFVK*VLLLLASLTLGLSC Trigger: GCAGGATAAACCTAGAGTTAAAGAAGCTAGAAGGAGCAGAACGCACTTCACAAAGTTCCAGACTGATATTCTAATTGAAGCTTTTGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS GCA 72 bp | CGCGGTACCGCCAAACCACCGCTCTCTCTGGGATTATaGCCTCTGTTTTGGGTTAGGAGCTGTAAAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGTAKPPLSLGL*PLFWVRSCKGG Trigger: GCCTCCTTTACAGCTCCTAACCCAAAACAGAGGGCATAATCCCAGAGAGAGCGGTGGTTTGGCGGTACCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS GCA 72 bp | ACGCTGGCAAGCTGCCGCAGCTGCACCTGCCACGGATaGAGCTCAGCTTTCTCAGACCAGTATTCTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TLASCRSCTCHG*SSAFSDQYSLS Trigger: TGACAAAGAATACTGGTCTGAGAAAGCTGAGCTGCATCCGTGGCAGGTGCAGCTGCGGCAGCTTGCCAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS CCA 72 bp | CTGGGGTGGATGAGGAGTTTTCTGAGTGTTCTGTCCTaGGTCTGGGTGCCGTGCTCTCCGGTTCTGAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LGWMRSFLSVLS*VWVPCSPVLKP Trigger: TGGTTTCAGAACCGGAGAGCACGGCACCCAGACCCAGGACAGAACACTCAGAAAACTCCTCATCCACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049793.9 ENSMUST00000173580.8 |
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| CDS CCA 72 bp | CAGCTCGGGAGAAAAGCGGCTTGTGGTAAGGACACGTaGGCTGCCAGAGACAGAGAGATGCACAACGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: QLGRKAACGKDT*AARDREMHNVH Trigger: ATGTACGTTGTGCATCTCTCTGTCTCTGGCAGCCCACGTGTCCTTACCACAAGCCGCTTTTCTCCCGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
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| CDS CCA 72 bp | CGGCCCTTAGAGAGATCCAAAGGCCCATTTGGAGTGTaGGGTGGAGAAAGAGGCAGTATAACTGAAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPLERSKGPFGV*GGERGSITEAL Trigger: CAGCGCTTCAGTTATACTGCCTCTTTCTCCACCCCACACTCCAAATGGGCCTTTGGATCTCTCTAAGGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS TCA 72 bp | TGCCCTCTGTTTTGGGTTAGGAGCTGTAAAGGAGGCTaGGAATGGAAGCCCTGCTCTCCTGGAGTTGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPLFWVRSCKGG*EWKPCSPGVVV Trigger: GACAACAACTCCAGGAGAGCAGGGCTTCCATTCTCAGCCTCCTTTACAGCTCCTAACCCAAAACAGAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
||
| CDS TCA 72 bp | TATTTACATCCCGTGTCTAGAGCACAGGGACAACCATaGGTAGCCTGGCTTTGTCCATCAACAGCTCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YLHPVSRAQGQP*VAWLCPSTARE Trigger: CTCCCGAGCTGTTGATGGACAAAGCCAGGCTACTCATGGTTGTCCCTGTGCTCTAGACACGGGATGTAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172667.8 |
||
| CDS CCA 72 bp | TGGATGAGGAGTTTTCTGAGTGTTCTGTCCTGGGTCTaGGTGCCGTGCTCTCCGGTTCTGAAACCATATATG | + |
|
Preference number: 6 (lower is better) Translates to: WMRSFLSVLSWV*VPCSPVLKPYM Trigger: CATATATGGTTTCAGAACCGGAGAGCACGGCACCCAGACCCAGGACAGAACACTCAGAAAACTCCTCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049793.9 ENSMUST00000173580.8 |
||
| CDS CCA 72 bp | TCAGCAAGCATGGATCCGAACCACTCGTCCCAGTGTTaGAGAAAGGAGGAATCATTTTGGTCTAGTTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SASMDPNHSSQC*RKEESFWSSFR Trigger: CCGGAAACTAGACCAAAATGATTCCTCCTTTCTCCAACACTGGGACGAGTGGTTCGGATCCATGCTTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
||
| CDS CCA 72 bp | ACCAGTATTCTTTGTCAGGCATCCATTCAGCAAGCATaGATCCGAACCACTCGTCCCAGTGTTGGAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSILCQASIQQA*IRTTRPSVGER Trigger: CCTTTCTCCAACACTGGGACGAGTGGTTCGGATCCATGCTTGCTGAATGGATGCCTGACAAAGAATACTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
||
| CDS CAA 90 bp | GCTGTAAAGGAGGCTGAGAATGGAAGCCCTGCTCTCCTGGAGTTGTaGTCGGTGATAAGTGACCTTTATTGGGATTTTGATCATCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVKEAENGSPALLEL*SVISDLYWDFDHHS Trigger: GGAGTGATGATCAAAATCCCAATAAAGGTCACTTATCACCGACAACAACTCCAGGAGAGCAGGGCTTCCATTCTCAGCCTCCTTTACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
||
| CDS CAA 90 bp | GGAGCTGTAAAGGAGGCTGAGAATGGAAGCCCTGCTCTCCTGGAGTaGTTGTCGGTGATAAGTGACCTTTATTGGGATTTTGATCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GAVKEAENGSPALLE*LSVISDLYWDFDHH Trigger: GTGATGATCAAAATCCCAATAAAGGTCACTTATCACCGACAACAACTCCAGGAGAGCAGGGCTTCCATTCTCAGCCTCCTTTACAGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
||
| CDS CAA 72 bp | TCCTTAGCCAGATGTCCTCTGGTAGCTAGATCAGGATaGGGATTCTTTTCAAACCACACACGAAGAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SLARCPLVARSG*GFFSNHTRRVS Trigger: GGACACTCTTCGTGTGTGGTTTGAAAAGAATCCCAATCCTGATCTAGCTACCAGAGGACATCTGGCTAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173155.8 ENSMUST00000173580.8 |
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| CDS CAA 72 bp | GAGGCTGAGAATGGAAGCCCTGCTCTCCTGGAGTTGTaGTCGGTGATAAGTGACCTTTATTGGGATTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: EAENGSPALLEL*SVISDLYWDFD Trigger: ATCAAAATCCCAATAAAGGTCACTTATCACCGACAACAACTCCAGGAGAGCAGGGCTTCCATTCTCAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS CAA 72 bp | AAGGAGGCTGAGAATGGAAGCCCTGCTCTCCTGGAGTaGTTGTCGGTGATAAGTGACCTTTATTGGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: KEAENGSPALLE*LSVISDLYWDF Trigger: AAAATCCCAATAAAGGTCACTTATCACCGACAACAACTCCAGGAGAGCAGGGCTTCCATTCTCAGCCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049793.9 |
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| CDS CAA 90 bp | GCTCCTTCTAGCTTCTTTAACTCTAGGTTTATCCTGCTCCTGCTCTaGGCTTTCTTCAGAACAGCATGCAAACTCTGCTTGCTTCCGTAT | + |
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Preference number: 6 (lower is better) Translates to: APSSFFNSRFILLLL*AFFRTACKLCLLPY Trigger: ATACGGAAGCAAGCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAGCAGGAGCAGGATAAACCTAGAGTTAAAGAAGCTAGAAGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS TCA 72 bp | GGATTCTTTTCAAACCACACACGAAGAGTGTCCTTTTaGCTCTGGGTTAGAATGATTCTCCTTCTCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GFFSNHTRRVSF*LWVRMILLLRA Trigger: AGCCCGGAGAAGGAGAATCATTCTAACCCAGAGTCAAAAGGACACTCTTCGTGTGTGGTTTGAAAAGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173155.8 ENSMUST00000173580.8 |
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| CDS GCA 72 bp | CTGCTCCTTCTAGCTTCTTTAACTCTAGGTTTATCCTaGTCCTGCTCTTGGCTTTCTTCAGAACAGCATGCA | + |
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Preference number: 6 (lower is better) Translates to: LLLLASLTLGLS*SCSWLSSEQHA Trigger: TGCATGCTGTTCTGAAGAAAGCCAAGAGCAGGAGCAGGATAAACCTAGAGTTAAAGAAGCTAGAAGGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS CAA 90 bp | TGCTTGCTTCCGTATTTTTCTATGCTTTTGAAACCAAGTCATAATTaGAGACTCAGAGATGCCGAGTTCCTTAGCCAGATGTCCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CLLPYFSMLLKPSHN*RLRDAEFLSQMSSG Trigger: ACCAGAGGACATCTGGCTAAGGAACTCGGCATCTCTGAGTCTCAAATTATGACTTGGTTTCAAAAGCATAGAAAAATACGGAAGCAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173155.8 ENSMUST00000173580.8 |
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| CDS GCA 72 bp | CTGCTCTTGGCTTTCTTCAGAACAGCATGCAAACTCTaGTTGCTTCCGTATTTTTCTATGCTTTTGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: LLLAFFRTACKL*LLPYFSMLLKP Trigger: TGGTTTCAAAAGCATAGAAAAATACGGAAGCAAGCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS CAA 90 bp | CTGCTCCTGCTCTTGGCTTTCTTCAGAACAGCATGCAAACTCTGCTaGCTTCCGTATTTTTCTATGCTTTTGAAACCAAGTCATAATTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLLLAFFRTACKLC*LPYFSMLLKPSHNL Trigger: CAAATTATGACTTGGTTTCAAAAGCATAGAAAAATACGGAAGCAAGCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAGCAGGAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS CAA 90 bp | AGAACAGCATGCAAACTCTGCTTGCTTCCGTATTTTTCTATGCTTTaGAAACCAAGTCATAATTTGAGACTCAGAGATGCCGAGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RTACKLCLLPYFSML*KPSHNLRLRDAEFL Trigger: AAGGAACTCGGCATCTCTGAGTCTCAAATTATGACTTGGTTTCAAAAGCATAGAAAAATACGGAAGCAAGCAGAGTTTGCATGCTGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS CCA 72 bp | CGATTCTTCTCAAAAGCTTCAATTAGAATATCAGTCTaGAACTTTGTGAAGTGCGTTCTGCTCCTTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RFFSKASIRISV*NFVKCVLLLLA Trigger: AGCTAGAAGGAGCAGAACGCACTTCACAAAGTTCCAGACTGATATTCTAATTGAAGCTTTTGAGAAGAATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS CAA 72 bp | CTCTTGGCTTTCTTCAGAACAGCATGCAAACTCTGCTaGCTTCCGTATTTTTCTATGCTTTTGAAACCAAGT | + |
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Preference number: 6 (lower is better) Translates to: LLAFFRTACKLC*LPYFSMLLKPS Trigger: ACTTGGTTTCAAAAGCATAGAAAAATACGGAAGCAAGCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173580.8 |
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| CDS CAA 72 bp | TGCAAACTCTGCTTGCTTCCGTATTTTTCTATGCTTTaGAAACCAAGTCATAATTTGAGACTCAGAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: CKLCLLPYFSML*KPSHNLRLRDA Trigger: GGCATCTCTGAGTCTCAAATTATGACTTGGTTTCAAAAGCATAGAAAAATACGGAAGCAAGCAGAGTTTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049793.9 ENSMUST00000172667.8 ENSMUST00000173155.8 ENSMUST00000173580.8 |
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