Pregenerated sensors for DUSP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031383Ensembl transcript IDs: ENSMUST00000019701.9
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACAGACGAGGCAGGTTCTGGAGCATGGCCCCGCTCTAGAGCGGTaGGGGTCAGGCCCGAAGCCCGGGCCCACCAGTAGGCACGTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: SQTRQVLEHGPALER*GSGPKPGPTSRHVK Trigger: TTTCACGTGCCTACTGGTGGGCCCGGGCTTCGGGCCTGACCCTCACCGCTCTAGAGCGGGGCCATGCTCCAGAACCTGCCTCGTCTGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 90 bp | CCTCCCTCCCCCTCAGCTCTAGCTCTGAGACCCTATCTCCTCCGGTaGCAGTTTGACCACCCTCAGTCACAAAGAGTCTCAGTGATCCTG | + |
|
Preference number: 1 (lower is better) Translates to: PPSPSALALRPYLLR*QFDHPQSQRVSVIL Trigger: CAGGATCACTGAGACTCTTTGTGACTGAGGGTGGTCAAACTGCCACCGGAGGAGATAGGGTCTCAGAGCTAGAGCTGAGGGGGAGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 90 bp | AAGTGGCCAGGTCTGCTCCCACAGGTGGGCATTCGGGGACAGGTATaGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATGATACACTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: KWPGLLPQVGIRGQV*SQEQVPVAKNDTLF Trigger: GAAGAGTGTATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCCCCGAATGCCCACCTGTGGGAGCAGACCTGGCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR TCA 90 bp | CCCCTCAGCTCTAGCTCTGAGACCCTATCTCCTCCGGTGGCAGTTTaGCCACCCTCAGTCACAAAGAGTCTCAGTGATCCTGTCAAGACA | + |
|
Preference number: 1 (lower is better) Translates to: PLSSSSETLSPPVAV*PPSVTKSLSDPVKT Trigger: TGTCTTGACAGGATCACTGAGACTCTTTGTGACTGAGGGTGGTCAAACTGCCACCGGAGGAGATAGGGTCTCAGAGCTAGAGCTGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 90 bp | CACACACACACACACACACACACACACAGAGTCTACAACGGGGTGTaGACTGCAATGAATGACCATGTGTGTCTGCAGCTTGGCCCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: HTHTHTHTHRVYNGV*TAMNDHVCLQLGPF Trigger: GAAGGGGCCAAGCTGCAGACACACATGGTCATTCATTGCAGTCCACACCCCGTTGTAGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR TCA 90 bp | AAAGACAAGATGGTCCTGCTGCCACAGGTATTGCCAGCTCCAGGCTaGGTATGTGAGTGGGCTAGTGTGTACACACACACACACACACAC | + |
|
Preference number: 1 (lower is better) Translates to: KDKMVLLPQVLPAPG*VCEWASVYTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTACACACTAGCCCACTCACATACTCAGCCTGGAGCTGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR GCA 90 bp | TGGATTACAAAAACAAAGACAAGATGGTCCTGCTGCCACAGGTATTaGCAGCTCCAGGCTGAGTATGTGAGTGGGCTAGTGTGTACACAC | + |
|
Preference number: 1 (lower is better) Translates to: WITKTKTRWSCCHRY*QLQAEYVSGLVCTH Trigger: GTGTGTACACACTAGCCCACTCACATACTCAGCCTGGAGCTGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR GCA 90 bp | GTGATTATGATGTGGATTACAAAAACAAAGACAAGATGGTCCTGCTaGCACAGGTATTGCCAGCTCCAGGCTGAGTATGTGAGTGGGCTA | + |
|
Preference number: 1 (lower is better) Translates to: VIMMWITKTKTRWSC*HRYCQLQAEYVSGL Trigger: TAGCCCACTCACATACTCAGCCTGGAGCTGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCACATCATAATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR GCA 90 bp | AATGTGATTATGATGTGGATTACAAAAACAAAGACAAGATGGTCCTaGTGCCACAGGTATTGCCAGCTCCAGGCTGAGTATGTGAGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: NVIMMWITKTKTRWS*CHRYCQLQAEYVSG Trigger: CCCACTCACATACTCAGCCTGGAGCTGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCACATCATAATCACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCGCCCATTGGCTCCCAGGCCCATGCCCTCCCATGTGACACTGCCCAGCAAACCCTCTCCCTGCTTATaGCTGCATCCCATCCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRPLAPRPMPSHVTLPSKPSPCL*LHPIPA Trigger: AGCAGGGATGGGATGCAGCCATAAGCAGGGAGAGGG...TTTGCTGGGCAGTGTCACATGGGAGGGCATGGGCCTGGGAGCCAATGGGCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGGCTCCCAGGCCCATGCCCTCCCATGTGACACTGCCCAGCAAAAAGCCACCGGGGCTGGCCTTGAGTaGGTGGGGCAGGTTTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: IGSQAHALPCDTAQQKATGAGLE*VGQVST Trigger: AGTAGAAACCTGCCCCACCCACTCAAGGCCAGCCCC...GGTGGCTTTTTGCTGGGCAGTGTCACATGGGAGGGCATGGGCCTGGGAGCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCAGGTCTGCTCCCACAGGTGGGCATTCGGGGACAGGTATGGAGCCAAGAGTCCACCATCCCCACATaGGGTATTGCGCTTTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WPGLLPQVGIRGQVWSQESTIPT*GIALSL Trigger: GAGGGAAAGCGCAATACCTCATGTGGGGATGGTGGA...CTCTTGGCTCCATACCTGTCCCCGAATGCCCACCTGTGGGAGCAGACCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGTGGGCATTCGGGGACAGGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAATCTGGGGCTGGCCTTaGGTGGGTGGGGCAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TGGHSGTGMEPRAGSCGKIWGWP*VGGAGF Trigger: GAAACCTGCCCCACCCACTCAAGGCCAGCCCCAGAT...TTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCCCCGAATGCCCACCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGGAGGAAAGAAACAGTCAGGGCACCAGATGTGTGGCTGGGATCTCGCCCCCTTTCCCCTCTCCCTaGTTATGGCTGCATCCCATC | + |
|
Preference number: 2 (lower is better) Translates to: GEEERNSQGTRCVAGISPPFPSP*LWLHPI Trigger: GATGGGATGCAGCCATAAGCAGGGAGAGGGGAAAGG...GGGCGAGATCCCAGCCACACATCTGGTGCCCTGACTGTTTCTTTCCTCCTCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGGCTCCCAGGCCCATGCCCTCCCATGTGACACTGCCCAGCAAAAAGCCACCTCTGGAATGGTCTCTTaGATAGGAAGCCCCACTCCC | + |
|
Preference number: 2 (lower is better) Translates to: IGSQAHALPCDTAQQKATSGMVS*IGSPTP Trigger: GGGAGTGGGGCTTCCTATCCAAGAGACCATTCCAGA...GGTGGCTTTTTGCTGGGCAGTGTCACATGGGAGGGCATGGGCCTGGGAGCCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR GCA 90 bp | GACACTGCCCAGCAAAAAGCCACCCAGAGAGGCTGTCCCTGTGGATGCGGAGAGTTTCTACTCTGTTCCTaGCTTGCTCCACCATCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: DTAQQKATQRGCPCGCGEFLLCS*LAPPSP Trigger: TGGGGATGGTGGAGCAAGGCAGGAACAGAGTAGAAA...CTCTCCGCATCCACAGGGACAGCCTCTCTGGGTGGCTTTTTGCTGGGCAGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGCCATTGTGTCTCTGGGTTCACACCCTACAGTTCCAAGAAGTCTAAGCCCCTACACGAGTCAAAGTaGCCAGGTCTGCTCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SSHCVSGFTPYSSKKSKPLHESK*PGLLPQ Trigger: CTGTGGGAGCAGACCTGGCCACTTTGACTCGTGTAG...GGGCTTAGACTTCTTGGAACTGTAGGGTGTGAACCCAGAGACACAATGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAACCAACAGTGGCTGTGTGAGACTCACAGTAGCAAAATTGAGGCCTTCATCTGGCTGTCCCTGTGGATaGGGAGAGCAGCCATTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QTNSGCVRLTVAKLRPSSGCPCG*GEQPLC Trigger: ACACAATGGCTGCTCTCCGCATCCACAGGGACAGCC...AGATGAAGGCCTCAATTTTGCTACTGTGAGTCTCACACAGCCACTGTTGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCGGGGACAGGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATGATACAGCCCAGGCAGCAATCTaGAATGGTCTCTTGGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: IRGQVWSQEQVPVAKNDTAQAAI*NGLLDR Trigger: CCTATCCAAGAGACCATTCCAGATTGCTGCCTGGGC...TGTATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCCCCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR TCA 90 bp | GTATGTGAGTGGGCTAGTGTGTACACACACACACACACACACACACACACACAGGCCCCACTCCCACCCTaGAAAAAGAAAGTAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VCEWASVYTHTHTHTHTQAPLPP*KKKVTV Trigger: GACTGTTACTTTCTTTTTTCAGGGTGGGAGTGGGGC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACTAGCCCACTCACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR TCA 72 bp | AGGCAGGTTCTGGAGCATGGCCCCGCTCTAGAGCGGTaGGGGTCAGGCCCGAAGCCCGGGCCCACCAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RQVLEHGPALER*GSGPKPGPTSR Trigger: CCTACTGGTGGGCCCGGGCTTCGGGCCTGACCCTCACCGCTCTAGAGCGGGGCCATGCTCCAGAACCTGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR TCA 72 bp | CTCGCCCATTGGCTCCCAGGCCCATGCCCTCCCATGTaGCACTGCCCAGCAAAAAGCCACCCAGAGAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LAHWLPGPCPPM*HCPAKSHPERL Trigger: CAGCCTCTCTGGGTGGCTTTTTGCTGGGCAGTGTCACATGGGAGGGCATGGGCCTGGGAGCCAATGGGCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 72 bp | GGAGGAAAGAAACAGTCAGGGCACCAGATGTGTGGCTaGGATCTCGCCCATTGGCTCCCAGGCCCATGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GGKKQSGHQMCG*DLAHWLPGPCP Trigger: AGGGCATGGGCCTGGGAGCCAATGGGCGAGATCCCAGCCACACATCTGGTGCCCTGACTGTTTCTTTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 72 bp | GGGAGGAGGAAAGAAACAGTCAGGGCACCAGATGTGTaGCTGGGATCTCGCCCATTGGCTCCCAGGCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GRRKETVRAPDV*LGSRPLAPRPM Trigger: CATGGGCCTGGGAGCCAATGGGCGAGATCCCAGCCACACATCTGGTGCCCTGACTGTTTCTTTCCTCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 72 bp | AAAGTAACAGTCACAGACGAGGCAGGTTCTGGAGCATaGCCCCGCTCTAGAGCGGTGAGGGTCAGGCCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: KVTVTDEAGSGA*PRSRAVRVRPE Trigger: TTCGGGCCTGACCCTCACCGCTCTAGAGCGGGGCCATGCTCCAGAACCTGCCTCGTCTGTGACTGTTACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 72 bp | TACACGAGTCAAAGTGGCCAGGTCTGCTCCCACAGGTaGGCATTCGGGGACAGGTATGGAGCCAAGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YTSQSGQVCSHR*AFGDRYGAKSR Trigger: CCTGCTCTTGGCTCCATACCTGTCCCCGAATGCCCACCTGTGGGAGCAGACCTGGCCACTTTGACTCGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCAGGTCTGCTCCCACAGGTGGGCATTCGGGGACAGGTATGGAGCCAAGAGATCTGGAATGGTCTCTaGGATAGGAAGCCCCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: WPGLLPQVGIRGQVWSQEIWNGL*DRKPHS Trigger: GGAGTGGGGCTTCCTATCCAAGAGACCATTCCAGAT...CTCTTGGCTCCATACCTGTCCCCGAATGCCCACCTGTGGGAGCAGACCTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR GCA 72 bp | GCCTTGAGTGGGTGGGGCAGGTTTCTACTCTGTTCCTaGCTTGCTCCACCATCCCCACATGAGGTATTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: ALSGWGRFLLCS*LAPPSPHEVLR Trigger: GCGCAATACCTCATGTGGGGATGGTGGAGCAAGGCAGGAACAGAGTAGAAACCTGCCCCACCCACTCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 72 bp | TGCCCAGCAAAAAGCCACCCAGAGAGGCTGTCCCTGTaGATGCGGAGAGCAGCCATTGTGTCTCTGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CPAKSHPERLSL*MRRAAIVSLGS Trigger: TGAACCCAGAGACACAATGGCTGCTCTCCGCATCCACAGGGACAGCCTCTCTGGGTGGCTTTTTGCTGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR-3UTR CAA 90 bp | TACAACGGGGTGTGGACTGCAATGAATGACCATGTGTGTCTGCAGCTTGGCCCCTGCGGAGAGCAGCCATaGTGTCTCTGGGTTCACACC | + |
|
Preference number: 3 (lower is better) Translates to: YNGVWTAMNDHVCLQLGPCGEQP*CLWVHT Trigger: GGTGTGAACCCAGAGACACAATGGCTGCTCTCCGCA...GGGGCCAAGCTGCAGACACACATGGTCATTCATTGCAGTCCACACCCCGTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 72 bp | GGTCTGCTCCCACAGGTGGGCATTCGGGGACAGGTATaGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: GLLPQVGIRGQV*SQEQVPVAKND Trigger: ATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCCCCGAATGCCCACCTGTGGGAGCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CCA 72 bp | CCCTCAGCTCTAGCTCTGAGACCCTATCTCCTCCGGTaGCAGTTTGACCACCCTCAGTCACAAAGAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PSALALRPYLLR*QFDHPQSQRVS Trigger: TGAGACTCTTTGTGACTGAGGGTGGTCAAACTGCCACCGGAGGAGATAGGGTCTCAGAGCTAGAGCTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR TCA 72 bp | ACACACACAGAGTCTACAACGGGGTGTGGACTGCAATaGATGACCATGTGTGTCTGCAGCTTGGCCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: THTESTTGCGLQ*MTMCVCSLAPS Trigger: GGAAGGGGCCAAGCTGCAGACACACATGGTCATTCATTGCAGTCCACACCCCGTTGTAGACTCTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR TCA 72 bp | TCTAGCTCTGAGACCCTATCTCCTCCGGTGGCAGTTTaGCCACCCTCAGTCACAAAGAGTCTCAGTGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSETLSPPVAV*PPSVTKSLSDP Trigger: AGGATCACTGAGACTCTTTGTGACTGAGGGTGGTCAAACTGCCACCGGAGGAGATAGGGTCTCAGAGCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR GCA 72 bp | AAAACAAAGACAAGATGGTCCTGCTGCCACAGGTATTaGCAGCTCCAGGCTGAGTATGTGAGTGGGCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KTKTRWSCCHRY*QLQAEYVSGLV Trigger: CACTAGCCCACTCACATACTCAGCCTGGAGCTGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR GCA 72 bp | ATGTGGATTACAAAAACAAAGACAAGATGGTCCTGCTaGCACAGGTATTGCCAGCTCCAGGCTGAGTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: MWITKTKTRWSC*HRYCQLQAEYV Trigger: CACATACTCAGCCTGGAGCTGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR TCA 72 bp | GGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATaGTACACTCTTCCTGAAAATGAAACAGCAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GMEPRAGSCGKE*YTLPENETARR Trigger: CCTTCTTGCTGTTTCATTTTCAGGAAGAGTGTATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR GCA 72 bp | ATGATGTGGATTACAAAAACAAAGACAAGATGGTCCTaGTGCCACAGGTATTGCCAGCTCCAGGCTGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: MMWITKTKTRWS*CHRYCQLQAEY Trigger: ATACTCAGCCTGGAGCTGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCACATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR TCA 90 bp | TCTCGCCCATTGGCTCCCAGGCCCATGCCCTCCCATGTGACACTGCCCAGCAAAGGGGACGACAGCTCCTaGCGCAGCCACAGGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRPLAPRPMPSHVTLPSKGDDSS*RSHRHD Trigger: GTCATGCCTGTGGCTGCGTCAGGAGCTGTCGTCCCC...TTTGCTGGGCAGTGTCACATGGGAGGGCATGGGCCTGGGAGCCAATGGGCGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CAA 72 bp | GTCAGGGCACCAGATGTGTGGCTGGGATCTCGCCCATaGGCTCCCAGGCCCATGCCCTCCCATGTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VRAPDVWLGSRP*APRPMPSHVTL Trigger: CAGTGTCACATGGGAGGGCATGGGCCTGGGAGCCAATGGGCGAGATCCCAGCCACACATCTGGTGCCCTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR TCA 90 bp | TCTCGCCCATTGGCTCCCAGGCCCATGCCCTCCCATGTGACACTGCCCAGCAAACTGGTTTCACACAGGTaGGGACACTCGGCCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRPLAPRPMPSHVTLPSKLVSHR*GHSAWN Trigger: GTTCCAGGCCGAGTGTCCTCACCTGTGTGAAACCAG...TTTGCTGGGCAGTGTCACATGGGAGGGCATGGGCCTGGGAGCCAATGGGCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CCA 90 bp | GTATGTGAGTGGGCTAGTGTGTACACACACACACACACACACACACACACACAGGAGCACAGGGGCCGGTaGGGGAGGCTGCAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCEWASVYTHTHTHTHTQEHRGR*GRLQWW Trigger: CCACCACTGCAGCCTCCCCCACCGGCCCCTGTGCTC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACTAGCCCACTCACATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CCA 90 bp | GACACTGCCCAGCAAAAAGCCACCCAGAGAGGCTGTCCCTGTGGATGCGGAGAGAGCGGATGCCAAGCTTaGCCAGGCTCTCCAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTAQQKATQRGCPCGCGESGCQA*PGSPNW Trigger: CCAATTTGGAGAGCCTGGCCAAGCTTGGCATCCGCT...CTCTCCGCATCCACAGGGACAGCCTCTCTGGGTGGCTTTTTGCTGGGCAGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR GCA 90 bp | CAAACCAACAGTGGCTGTGTGAGACTCACAGTAGCAAAATTGAGGCCTTCATCTGCGACCGCACCGACATaGTCCCCCTCCGCAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTNSGCVRLTVAKLRPSSATAPT*SPSAGG Trigger: GCCGCCTGCGGAGGGGGAGCATGTCGGTGCGGTCGC...AGATGAAGGCCTCAATTTTGCTACTGTGAGTCTCACACAGCCACTGTTGGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR GCA 90 bp | GTATGTGAGTGGGCTAGTGTGTACACACACACACACACACACACACACACACAGAGAGCGGCTGACCCCTaGCAGACAGTGGACGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCEWASVYTHTHTHTHTQRAADP*QTVDEH Trigger: GTGCTCGTCCACTGTCTGGCAGGGGTCAGCCGCTCT...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACTAGCCCACTCACATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CCA 90 bp | GGACAGGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATGATACACTCTTCGTGGGTCTGAGACGGTaGACTCTGGTCCCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQVWSQEQVPVAKNDTLFVGLRR*TLVPHC Trigger: GCAGTGGGGGACCAGAGTCCACCGTCTCAGACCCAC...GAAGAGTGTATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| 3UTR CAA 72 bp | CAGAGAGGCTGTCCCTGTGGATGCGGAGAGCAGCCATaGTGTCTCTGGGTTCACACCCTACAGTTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRGCPCGCGEQP*CLWVHTLQFQE Trigger: TTCTTGGAACTGTAGGGTGTGAACCCAGAGACACAATGGCTGCTCTCCGCATCCACAGGGACAGCCTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGGCATTCGGGGACAGGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAGTCAGCCTCAGACTCTaGATCAGAGAAATCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGHSGTGMEPRAGSCGKVSLRL*IREIRA Trigger: AGCTCTGATTTCTCTGATGCAGAGTCTGAGGCTGAC...TTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCCCCGAATGCCCACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CCA 90 bp | GATGTGGATTACAAAAACAAAGACAAGATGGTCCTGCTGCCACAGGTATTGCCATCTTCCCGCAGCTTCTaGAGCAGGACGCCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DVDYKNKDKMVLLPQVLPSSRSF*SRTPST Trigger: GGTGCTGGGCGTCCTGCTCCAGAAGCTGCGGGAAGA...TGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATGATACACTCTCAGCTGGAGGGGATGTaGTGTTCTCAGAATCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDRYGAKSRFLWQRMIHSQLEGM*CSQNLG Trigger: GCCTAGATTCTGAGAACACCACATCCCCTCCAGCTG...AGAGTGTATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR TCA 90 bp | GCTTATGGCTGCATCCCATCCCTGCTTATACTAGGGGTCATAAGTAGGGACCAGGTAGGCATCGTTGAGTaGGAGGTGAAGCTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AYGCIPSLLILGVISRDQVGIVE*EVKLLH Trigger: ATGCAGAAGCTTCACCTCTCACTCAACGATGCCTAC...CTGGTCCCTACTTATGACCCCTAGTATAAGCAGGGATGGGATGCAGCCATAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CCA 90 bp | ATTCGGGGACAGGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATGATACACCAGGCTCTCCAAATTaGCTGAATCTCGAGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRGQVWSQEQVPVAKNDTPGSPN*LNLEHC Trigger: GCAGTGCTCGAGATTCAGCCAATTTGGAGAGCCTGG...TGTATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCCCCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR TCA 90 bp | GGACAGGTATGGAGCCAAGAGCAGGTTCCTGTGGCAAAGAATGATACACTCTTCAGTCGTAGGCATCGTTaGGTGAGAGGTGAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQVWSQEQVPVAKNDTLFSRRHR*VRGEAS Trigger: AGAAGCTTCACCTCTCACTCAACGATGCCTACGACT...GAAGAGTGTATCATTCTTTGCCACAGGAACCTGCTCTTGGCTCCATACCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR TCA 90 bp | GATGTGGATTACAAAAACAAAGACAAGATGGTCCTGCTGCCACAGGTATTGCCAACAAGGCCTCATCAATaGATGCAATGGCCTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DVDYKNKDKMVLLPQVLPTRPHQ*MQWPPE Trigger: TTCCGGAGGCCATTGCATTCATTGATGAGGCCTTGT...TGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR GCA 90 bp | CAAACCAACAGTGGCTGTGTGAGACTCACAGTAGCAAAATTGAGGCCTTCATCTGGCCTCATCAATGAATaGAATGGCCTCCGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTNSGCVRLTVAKLRPSSGLINE*NGLRKE Trigger: TTCTTTCCGGAGGCCATTGCATTCATTGATGAGGCC...AGATGAAGGCCTCAATTTTGCTACTGTGAGTCTCACACAGCCACTGTTGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS GCA 90 bp | GGCGCAGCATCAGCGAGGGCAGGGCCACGCTCAGCGCCCCGCAGATaGGCGCCGACTCATACAGCTCCCGGCTGCGGCAGTCCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAASARAGPRSAPRR*APTHTAPGCGSPAA Trigger: TGCTGCTGGACTGCCGCAGCCGGGAGCTGTATGAGTCGGCGCGCATCTGCGGGGCGCTGAGCGTGGCCCTGCCCTCGCTGATGCTGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS GCA 90 bp | CGCTCAGCGCCCCGCAGATGCGCGCCGACTCATACAGCTCCCGGCTaGGGCAGTCCAGCAGCAGAAGCTGTGGGCGCGGGGACGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSAPRRCAPTHTAPG*GSPAAEAVGAGTTA Trigger: AGCTGTCGTCCCCGCGCCCACAGCTTCTGCTGCTGGACTGCCGCAGCCGGGAGCTGTATGAGTCGGCGCGCATCTGCGGGGCGCTGAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CCA 90 bp | GCTTCAGCCTCCGCTGCTTCACGATGGCACTGGCCACTGCTACCCTaGTCGTACAGGAGCACAGGGGCCGGTGGGGGAGGCTGCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASASAASRWHWPLLP*SYRSTGAGGGGCSG Trigger: ACCACTGCAGCCTCCCCCACCGGCCCCTGTGCTCCTGTACGACCAGGGTAGCAGTGGCCAGTGCCATCGTGAAGCAGCGGAGGCTGAAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CAA 90 bp | GACACTGCCCAGCAAAAAGCCACCCAGAGAGGCTGTCCCTGTGGATGCGGAGAGGCATCCCACTCTTCTTaGGCCTCCGCTTTGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DTAQQKATQRGCPCGCGEASHSS*ASALAS Trigger: GGAGGCCAAAGCGGAGGCCAAAGAAGAGTGGGATGC...CTCTCCGCATCCACAGGGACAGCCTCTCTGGGTGGCTTTTTGCTGGGCAGTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CAA 90 bp | GTATGTGAGTGGGCTAGTGTGTACACACACACACACACACACACACACACACAGGCTTTAGCCTCCGCTTaGGCCTCCGCTTTGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCEWASVYTHTHTHTHTQALASA*ASALAS Trigger: GGAGGCCAAAGCGGAGGCCAAAGCGGAGGCTAAAGC...CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACACTAGCCCACTCACATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS-3UTR CAA 90 bp | GATGTGGATTACAAAAACAAAGACAAGATGGTCCTGCTGCCACAGGTATTGCCAGCTTTGGCCTCCGCTTaGGCCTCCGCTTTGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DVDYKNKDKMVLLPQVLPALASA*ASALAS Trigger: GGAGGCCAAAGCGGAGGCCAAAGCGGAGGCCAAAGC...TGGCAATACCTGTGGCAGCAGGACCATCTTGTCTTTGTTTTTGTAATCCACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS GCA 72 bp | CCCCGCAGATGCGCGCCGACTCATACAGCTCCCGGCTaGGGCAGTCCAGCAGCAGAAGCTGTGGGCGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRRCAPTHTAPG*GSPAAEAVGAG Trigger: CCCCGCGCCCACAGCTTCTGCTGCTGGACTGCCGCAGCCGGGAGCTGTATGAGTCGGCGCGCATCTGCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS GCA 72 bp | TCAGCGAGGGCAGGGCCACGCTCAGCGCCCCGCAGATaGGCGCCGACTCATACAGCTCCCGGCTGCGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SARAGPRSAPRR*APTHTAPGCGS Trigger: ACTGCCGCAGCCGGGAGCTGTATGAGTCGGCGCGCATCTGCGGGGCGCTGAGCGTGGCCCTGCCCTCGCTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS GCA 72 bp | GCAGTGGTGGCCCAGGCAAGAGCGACCGCACCGACATaGTCCCCCTCCGCAGGCGGCGCAGCATCAGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVVAQARATAPT*SPSAGGAASAR Trigger: CCTCGCTGATGCTGCGCCGCCTGCGGAGGGGGAGCATGTCGGTGCGGTCGCTCTTGCCTGGGCCACCACTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS TCA 72 bp | AGCAGCAGAAGCTGTGGGCGCGGGGACGACAGCTCCTaGCGCAGCCACAGGCATGACCGACTCAGACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSCGRGDDSS*RSHRHDRLRLS Trigger: GGAGAGTCTGAGTCGGTCATGCCTGTGGCTGCGTCAGGAGCTGTCGTCCCCGCGCCCACAGCTTCTGCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CAA 72 bp | TTGGCCTCCGCTTTGGCCTCCGCTTTAGCCTCCGCTTaGGCCTCCGCTTTGGCCTCCGCTTTGGCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LASALASALASA*ASALASALASA Trigger: AGCGGAGGCCAAAGCGGAGGCCAAAGCGGAGGCCAAAGCGGAGGCTAAAGCGGAGGCCAAAGCGGAGGCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CAA 72 bp | TTGGCCTCCGCTTTGGCCTCCGCTTTAGCCTCCGCTTaGGCCTCCGCTTTGGCCTCCGCTTTAGCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LASALASALASA*ASALASALASA Trigger: AGCGGAGGCTAAAGCGGAGGCCAAAGCGGAGGCCAAAGCGGAGGCTAAAGCGGAGGCCAAAGCGGAGGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CAA 72 bp | TTGGCCTCCGCTTTAGCCTCCGCTTTGGCCTCCGCTTaGGCCTCCGCTTTGGCCTCCGCTTTAGCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LASALASALASA*ASALASALASA Trigger: AGCGGAGGCTAAAGCGGAGGCCAAAGCGGAGGCCAAAGCGGAGGCCAAAGCGGAGGCTAAAGCGGAGGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CAA 90 bp | TTCTGGAGCAGGACGCCCAGCACCGAGTCAGCATCCCACTCTTCTTaGGCCTCCGCTTTGGCCTCCGCTTTAGCCTCCGCTTTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWSRTPSTESASHSS*ASALASALASALAS Trigger: GGAGGCCAAAGCGGAGGCTAAAGCGGAGGCCAAAGCGGAGGCCAAAGAAGAGTGGGATGCTGACTCGGTGCTGGGCGTCCTGCTCCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CAA 72 bp | AGGACGCCCAGCACCGAGTCAGCATCCCACTCTTCTTaGGCCTCCGCTTTGGCCTCCGCTTTAGCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTPSTESASHSS*ASALASALASA Trigger: AGCGGAGGCTAAAGCGGAGGCCAAAGCGGAGGCCAAAGAAGAGTGGGATGCTGACTCGGTGCTGGGCGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CAA 72 bp | ACCGAGTCAGCATCCCACTCTTCTTTGGCCTCCGCTTaGGCCTCCGCTTTAGCCTCCGCTTTGGCCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TESASHSSLASA*ASALASALASA Trigger: AGCGGAGGCCAAAGCGGAGGCTAAAGCGGAGGCCAAAGCGGAGGCCAAAGAAGAGTGGGATGCTGACTCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS TCA 72 bp | TTTCACACAGGTGAGGACACTCGGCCTGGAACTTGCTaGAGCCACCCTGTAGGTAGTATGCTGGGTAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FHTGEDTRPGTC*SHPVGSMLGSL Trigger: AAGGCTACCCAGCATACTACCTACAGGGTGGCTTCAGCAAGTTCCAGGCCGAGTGTCCTCACCTGTGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||
| CDS CCA 72 bp | TATAGCGGATGCCAAGCTTGGCCAGGCTCTCCAAATTaGCTGAATCTCGAGCACTGCCTAGGTAGAGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: YSGCQAWPGSPN*LNLEHCLGRDW Trigger: CCAATCTCTACCTAGGCAGTGCTCGAGATTCAGCCAATTTGGAGAGCCTGGCCAAGCTTGGCATCCGCTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019701.9 |
||