Pregenerated sensors for DUSP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037887Ensembl transcript IDs: ENSMUST00000039926.10, ENSMUST00000143661.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCAAGGTCCCAAGGGGGAAGCTGGCACCCTGGCCCTCGGGGACTaGAAGCCTTGGGCAAGGGACCTCTCCTGTACTGGACAACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GQGPKGEAGTLALGD*KPWARDLSCTGQQR Trigger: CCTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAAGGCTTCCAGTCCCCGAGGGCCAGGGTGCCAGCTTCCCCCTTGGGACCTTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR GCA 90 bp | GTCTCCTGGACAGCAGTAGAGTGGGGGCATGGAGGGGGAAGCCAGTaGACCCTCCACACCCAGGGTCACCTCAGAAATCCAATGACAGAC | + |
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Preference number: 1 (lower is better) Translates to: VSWTAVEWGHGGGSQ*TLHTQGHLRNPMTD Trigger: GTCTGTCATTGGATTTCTGAGGTGACCCTGGGTGTGGAGGGTGCACTGGCTTCCCCCTCCATGCCCCCACTCTACTGCTGTCCAGGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR GCA 90 bp | CTCCACACAGTGGACAGTGGGTGGAAAGCCACCAGGGAAAGCCTATaGTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCC | + |
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Preference number: 1 (lower is better) Translates to: LHTVDSGWKATRESL*STSPNTKEWGAETS Trigger: GGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTTCCCTGGTGGCTTTCCACCCACTGTCCACTGTGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CCA 90 bp | GCCACCAGGGAAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTaGGGAGCTGAGACCTCCTCCATCTTGTCTGCTCACTTTGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: ATRESLCSTSPNTKE*GAETSSILSAHFGE Trigger: CTCCCCAAAGTGAGCAGACAAGATGGAGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTTCCCTGGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CCA 90 bp | ACATTGTTTCAAATACAAAAGGAGGGACAGGAAAGTGCGGCCTCATaGGGCAAGGTCCCAAGGGGGAAGCTGGCACCCTGGCCCTCGGGG | + |
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Preference number: 1 (lower is better) Translates to: TLFQIQKEGQESAAS*GKVPRGKLAPWPSG Trigger: CCCCGAGGGCCAGGGTGCCAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTTTTGTATTTGAAACAATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR TCA 90 bp | AGCTACCTCATCTGGCTTTCAGGAACCCCCTTGTCCAAGTCTCCCTaGAAACTCTGCTCCACTGGGCCCAGTGCCCACCAACACCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: SYLIWLSGTPLSKSP*KLCSTGPSAHQHLP Trigger: TGGCAGGTGTTGGTGGGCACTGGGCCCAGTGGAGCAGAGTTTTCAGGGAGACTTGGACAAGGGGGTTCCTGAAAGCCAGATGAGGTAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR TCA 90 bp | CCCAATGGGCAGGGCATCTGCAAAGGAAAAGAGAGATGCTTCCTCTaGATGGCCTCCTGGGCCCTTCTAGGGAACTGGGCCTCACTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PNGQGICKGKERCFL*MASWALLGNWASLS Trigger: TGAGAGTGAGGCCCAGTTCCCTAGAAGGGCCCAGGAGGCCATTCAGAGGAAGCATCTCTCTTTTCCTTTGCAGATGCCCTGCCCATTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR TCA 90 bp | AACAGAGGGAGCCAGGTGCATTCTGGGCCATTCCAGTGCCGGCAGTaGCCAGGTAAGAGTGGTGGGAGAGTGATAGAGAACCCTATACCC | + |
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Preference number: 1 (lower is better) Translates to: NRGSQVHSGPFQCRQ*PGKSGGRVIENPIP Trigger: GGGTATAGGGTTCTCTATCACTCTCCCACCACTCTTACCTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCTCCCTCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CCA 90 bp | AAGAGTGGTGGGAGAGTGATAGAGAACCCTATACCCTCCACACAGTaGACAGTGGGTGGAAAGCCACCAGGGAAAGCCTATGCTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: KSGGRVIENPIPSTQ*TVGGKPPGKAYAPP Trigger: AGGTGGAGCATAGGCTTTCCCTGGTGGCTTTCCACCCACTGTCCACTGTGTGGAGGGTATAGGGTTCTCTATCACTCTCCCACCACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | GGACTCTCTCCTGAGAAGCCCTTTGGAGGATGGGGCAGTCATGGGGGACTTGCCGTGCCCACCAACACCTaGCAGGTAACAGCCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GLSPEKPFGGWGSHGGLAVPTNT*QVTALG Trigger: CCCCAGGGCTGTTACCTGGCAGGTGTTGGTGGGCAC...GGCAAGTCCCCCATGACTGCCCCATCCTCCAAAGGGCTTCTCAGGAGAGAGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCAGGTGCATTCTGGGCCATTCCAGTGCCGGCAGTGACCAGGTAAGAGTGGAGAGGGGAGGGGTCTaGGGCTCAGTTTGTGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GARCILGHSSAGSDQVRVERGGV*GSVCGK Trigger: CTTGCCACAAACTGAGCCGCAGACCCCTCCCCTCTC...CACTCTTACCTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGCCCAACACAAAGGAGTaGGGAGCTGAGACCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KEGQESAASWGKVPRGKLPNTKE*GAETSS Trigger: GGAGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGG...CAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTCCTAGAGCTCCCCTCTaGCCAGCAGAGATAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: KAYAPPPPTQRSGELRPPPRAPL*PAEIAP Trigger: AGGGGCTATCTCTGCTGGTCAGAGGGGAGCTCTAGG...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCAAGGGACCTCTCCTGTACTGGACAACAGAGGGAGCCAGGTGCATTCTGGGTGGGGTAGAAAGGTaGCACCCTAGATCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LGKGPLLYWTTEGARCILGGVER*HPRSCP Trigger: GGGGCAGGATCTAGGGTGGCACCTTTCTACCCCACC...CAGAATGCACCTGGCTCCCTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGCCCAGAACAAGAGCTTaGCTCTACCCCCATTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: KEGQESAASWGKVPRGKLPRTRA*LYPHSY Trigger: GTAAGAATGGGGGTAGAGTCAAGCTCTTGTTCTGGG...CAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCAAGGGACCTCTCCTGTACTGGACAACAGAGGGAGCCAGGTGCATTCTGCACTGCCCCAGTACATaGTGGGGAAGTCTACTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LGKGPLLYWTTEGARCILHCPST*WGSLLG Trigger: GCCGAGTAGACTTCCCCAGCATGTACTGGGGCAGTG...CAGAATGCACCTGGCTCCCTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGCTGCGGCTCAGTTTGTaGCAAGTAAGGGTTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KEGQESAASWGKVPRGKLLRLSL*QVRVWV Trigger: AACCCAAACCCTTACTTGCCACAAACTGAGCCGCAG...CAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTCTAAGCTCCTCCTGCTaGCATTGGACACTGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KAYAPPPPTQRSGELRPPLSSSC*HWTLPQ Trigger: CTGGGGCAGTGTCCAATGCCAGCAGGAGGAGCTTAG...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCCACCAGGGAAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGACACAGCAAGAGAGGTaGGGTAGAAAGGTGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: ESHQGKPMLHLPQHKGVGTQQER*GRKVPP Trigger: GGGTGGCACCTTTCTACCCCACCTCTCTTGCTGTGT...CCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTTCCCTGGTGGCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCAGGTGCATTCTGGGCCATTCCAGTGCCGGCAGTGACCAGGTAAGAGTGTGCCACCCTAGATCCTaGCCCAGCTACTTGTTAACA | + |
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Preference number: 2 (lower is better) Translates to: GARCILGHSSAGSDQVRVCHPRS*PSYLLT Trigger: TGTTAACAAGTAGCTGGGGCAGGATCTAGGGTGGCA...CACTCTTACCTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCAAGGGACCTCTCCTGTACTGGACAACAGAGGGAGCCAGGTGCATTCTGTCCTCCTGCTGGCATTaGACACTGCCCCAGTACATG | + |
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Preference number: 2 (lower is better) Translates to: LGKGPLLYWTTEGARCILSSCWH*TLPQYM Trigger: CATGTACTGGGGCAGTGTCCAATGCCAGCAGGAGGA...CAGAATGCACCTGGCTCCCTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTTCCTCCCCTTACCTATaGCTTTGCTGCAGAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KAYAPPPPTQRSGELRPPSSPYL*LCCRAQ Trigger: TTGGGCTCTGCAGCAAAGCCATAGGTAAGGGGAGGA...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCGTGTATCCAGGATAGATGCCATATCTCCATCAAGAGAGGGGAGGAACCAGTTAGGGTCCAACTGGTaGCCCCACACCACTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PRVSRIDAISPSREGRNQLGSNW*PHTTVS Trigger: GGAGACAGTGGTGTGGGGCCACCAGTTGGACCCTAA...CTGGTTCCTCCCCTCTCTTGATGGAGATATGGCATCTATCCTGGATACACGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTCTACTCGGCTTCCCAATGGGCAGGGCATCTGCAAAGGAAAAGAGAGATTCACTCTCACAGGAGTaGGGTCCTCCGTCCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: GSLLGFPMGRASAKEKRDSLSQE*GPPSLP Trigger: AGGCAAGGACGGAGGACCTCACTCCTGTGAGAGTGA...ATCTCTCTTTTCCTTTGCAGATGCCCTGCCCATTGGGAAGCCGAGTAGACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCAAGGGACCTCTCCTGTACTGGACAACAGAGGGAGCCAGGTGCATTCTGCCTTACCTATGGCTTTaGTGCAGAGCCCAAGATAGG | + |
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Preference number: 2 (lower is better) Translates to: LGKGPLLYWTTEGARCILPYLWL*CRAQDR Trigger: CCTATCTTGGGCTCTGCAGCAAAGCCATAGGTAAGG...CAGAATGCACCTGGCTCCCTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | CCCCGTGTATCCAGGATAGATGCCATATCTCCATCAAGAGAGGGGAGGAACCAGATGCTGCCTGGGAAGTaGGCATACAGAGGGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: PRVSRIDAISPSREGRNQMLPGK*AYRGTL Trigger: GAGAGTCCCTCTGTATGCGCACTTCCCAGGCAGCAT...CTGGTTCCTCCCCTCTCTTGATGGAGATATGGCATCTATCCTGGATACACGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTGATAGAGAACCCTATACCCTCCACACAGTGGACAGTGGGTGGAAAGCCAAGCCCTTTGGAGGATaGGGCAGTCATGGGGGACTT | + |
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Preference number: 2 (lower is better) Translates to: ESDREPYTLHTVDSGWKAKPFGG*GSHGGL Trigger: AAGTCCCCCATGACTGCCCCATCCTCCAAAGGGCTT...GGCTTTCCACCCACTGTCCACTGTGTGGAGGGTATAGGGTTCTCTATCACTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CAA 90 bp | CAAAGGAGTGGGGAGCTGAGACCTCCTCCATCTTGTCTGCTCACTTaGGGGAGACCAGGGTCATGTGTAAGTGAGAACAGAGACAGACTG | + |
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Preference number: 2 (lower is better) Translates to: QRSGELRPPPSCLLT*GRPGSCVSENRDRL Trigger: CAGTCTGTCTCTGTTCTCACTTACACATGACCCTGGTCTCCCCAAAGTGAGCAGACAAGATGGAGGAGGTCTCAGCTCCCCACTCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTAGCTGGGCAGCTCTTTaGAAGGTCAGTAATGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: KAYAPPPPTQRSGELRPPSWAAL*KVSNVS Trigger: GGAAACATTACTGACCTTTCAAAGAGCTGCCCAGCT...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTGTATCCAGGATAGATGCCATATCTCCATCAAGAGAGGGGAGGAACCAGTTGTCCAAGTCTCCCTaGAAACTCTGCTCCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: PRVSRIDAISPSREGRNQLSKSP*KLCSTG Trigger: CCCAGTGGAGCAGAGTTTTCAGGGAGACTTGGACAA...CTGGTTCCTCCCCTCTCTTGATGGAGATATGGCATCTATCCTGGATACACGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGACCTCAGAAATCCAATaGCAGACAGGAGGTAAATTT | + |
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Preference number: 2 (lower is better) Translates to: KEGQESAASWGKVPRGKLTSEIQ*QTGGKF Trigger: AAATTTACCTCCTGTCTGTCATTGGATTTCTGAGGT...CAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCAAATACAAAAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCAAAGGAGTGGGGAGCTaGGACCTCCTCCATCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: CFKYKRRDRKVRPHGARSKGVGS*DLLHLV Trigger: GACAAGATGGAGGAGGTCTCAGCTCCCCACTCCTTT...GGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTTTTGTATTTGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTTACCTATGGCTTTGCTaGAGAGCCCAAGATAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KAYAPPPPTQRSGELRPPYLWLC*RAQDRR Trigger: TCTCCTATCTTGGGCTCTGCAGCAAAGCCATAGGTA...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTCTACTCGGCTTCCCAATGGGCAGGGCATCTGCAAAGGAAAAGAGAGATAAAACTCTGCTCCACTaGGCCCAGTGCCCACCAACA | + |
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Preference number: 2 (lower is better) Translates to: GSLLGFPMGRASAKEKRDKTLLH*AQCPPT Trigger: TGTTGGTGGGCACTGGGCCCAGTGGAGCAGAGTTTT...ATCTCTCTTTTCCTTTGCAGATGCCCTGCCCATTGGGAAGCCGAGTAGACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCAAATACAAAAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCTACTCGGCTTCCCAATaGGCAGGGCATCTGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: CFKYKRRDRKVRPHGARSYSASQ*AGHLQR Trigger: CCTTTGCAGATGCCCTGCCCATTGGGAAGCCGAGTA...GGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTTTTGTATTTGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTGATATTCAGCAAGGGTaGCTGGCACTTTTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KAYAPPPPTQRSGELRPPDIQQG*LALFSL Trigger: CAAGGAGAAAAGTGCCAGCCACCCTTGCTGAATATC...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CAA 90 bp | AGGGCAGAGAAGGTATCTATCTCTATGCCACTAAGACTTGGCAATTaGAGGTGTGGGGACACTGCTAGTGGGGCCTTCTGCAGGGACACT | + |
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Preference number: 2 (lower is better) Translates to: RAEKVSISMPLRLGN*RCGDTASGAFCRDT Trigger: AGTGTCCCTGCAGAAGGCCCCACTAGCAGTGTCCCCACACCTCAAATTGCCAAGTCTTAGTGGCATAGAGATAGATACCTTCTCTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTATATATATTTATACCTaGCCTGGCTGGAGCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: KAYAPPPPTQRSGELRPPIYIYT*PGWSKG Trigger: GCCCTTGCTCCAGCCAGGCCAGGTATAAATATATAT...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR TCA 90 bp | CCCCGTGTATCCAGGATAGATGCCATATCTCCATCAAGAGAGGGGAGGAACCAGAACCCAGTTTGGGATTaGAGGTGGCCTCATATTGCT | + |
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Preference number: 2 (lower is better) Translates to: PRVSRIDAISPSREGRNQNPVWD*RWPHIA Trigger: AGCAATATGAGGCCACCTTCAATCCCAAACTGGGTT...CTGGTTCCTCCCCTCTCTTGATGGAGATATGGCATCTATCCTGGATACACGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGGTATCTATCTCTATGCCACTAAGACTTGGCAATTTGAGGTGTGGGGACTATTTATACCTGGCCTaGCTGGAGCAAGGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: EKVSISMPLRLGNLRCGDYLYLA*LEQGHR Trigger: CCTGTGCCCTTGCTCCAGCCAGGCCAGGTATAAATA...GTCCCCACACCTCAAATTGCCAAGTCTTAGTGGCATAGAGATAGATACCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR GCA 72 bp | GCTCCTCCTGCTGGCATTGGACACTGCCCCAGTACATaGTGGGGAAGTCTACTCGGCTTCCCAATGGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: APPAGIGHCPST*WGSLLGFPMGR Trigger: CCTGCCCATTGGGAAGCCGAGTAGACTTCCCCAGCATGTACTGGGGCAGTGTCCAATGCCAGCAGGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR GCA 72 bp | ACAGCAGTAGAGTGGGGGCATGGAGGGGGAAGCCAGTaGACCCTCCACACCCAGGGTCACCTCAGAAATCCA | + |
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Preference number: 3 (lower is better) Translates to: TAVEWGHGGGSQ*TLHTQGHLRNP Trigger: TGGATTTCTGAGGTGACCCTGGGTGTGGAGGGTGCACTGGCTTCCCCCTCCATGCCCCCACTCTACTGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR GCA 72 bp | GGACCTCTCCTGTACTGGACAACAGAGGGAGCCAGGTaGATTCTGGGCCATTCCAGTGCCGGCAGTGACCAG | + |
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Preference number: 3 (lower is better) Translates to: GPLLYWTTEGAR*ILGHSSAGSDQ Trigger: CTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCTCCCTCTGTTGTCCAGTACAGGAGAGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR GCA 72 bp | GTGGACAGTGGGTGGAAAGCCACCAGGGAAAGCCTATaGTCCACCTCCCCCAACACAAAGGAGTGGGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: VDSGWKATRESL*STSPNTKEWGA Trigger: AGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTTCCCTGGTGGCTTTCCACCCACTGTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CCA 72 bp | AACCAGACCCAAGGGGGAGCTTTAGGGTCCAACTGGTaGCCCCACACCACTGTCTCCTGGACAGCAGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: NQTQGGALGSNW*PHTTVSWTAVE Trigger: CTCTACTGCTGTCCAGGAGACAGTGGTGTGGGGCCACCAGTTGGACCCTAAAGCTCCCCCTTGGGTCTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CCA 72 bp | GGACTGGAAGCCTTGGGCAAGGGACCTCTCCTGTACTaGACAACAGAGGGAGCCAGGTGCATTCTGGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: GLEALGKGPLLY*TTEGARCILGH Trigger: ATGGCCCAGAATGCACCTGGCTCCCTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAAGGCTTCCAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CCA 72 bp | CAAATACAAAAGGAGGGACAGGAAAGTGCGGCCTCATaGGGCAAGGTCCCAAGGGGGAAGCTGGCACCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QIQKEGQESAAS*GKVPRGKLAPW Trigger: CCAGGGTGCCAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTTTTGTATTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCCAGGTGCATTCTGGGCCATTCCAGTGCCGGCAGTGACCAGGTAAGAGTGGAGACCTCCTCCATCTaGTCTGCTCACTTTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GARCILGHSSAGSDQVRVETSSI*SAHFGE Trigger: CTCCCCAAAGTGAGCAGACAAGATGGAGGAGGTCTC...CACTCTTACCTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR TCA 72 bp | GCCCTTCTAGGGAACTGGGCCTCACTCTCACAGGAGTaGGGTCCTCCGTCCTTGCCTTCAGAGCTACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALLGNWASLSQE*GPPSLPSELPH Trigger: ATGAGGTAGCTCTGAAGGCAAGGACGGAGGACCTCACTCCTGTGAGAGTGAGGCCCAGTTCCCTAGAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR TCA 72 bp | ATCTGGCTTTCAGGAACCCCCTTGTCCAAGTCTCCCTaGAAACTCTGCTCCACTGGGCCCAGTGCCCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: IWLSGTPLSKSP*KLCSTGPSAHQ Trigger: TTGGTGGGCACTGGGCCCAGTGGAGCAGAGTTTTCAGGGAGACTTGGACAAGGGGGTTCCTGAAAGCCAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR TCA 72 bp | AGCCAGGTGCATTCTGGGCCATTCCAGTGCCGGCAGTaGCCAGGTAAGAGTGGTGGGAGAGTGATAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SQVHSGPFQCRQ*PGKSGGRVIEN Trigger: GTTCTCTATCACTCTCCCACCACTCTTACCTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CCA 72 bp | GAAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTaGGGAGCTGAGACCTCCTCCATCTTGTCTGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ESLCSTSPNTKE*GAETSSILSAH Trigger: GTGAGCAGACAAGATGGAGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CCA 72 bp | AGAGAACCCTATACCCTCCACACAGTGGACAGTGGGTaGAAAGCCACCAGGGAAAGCCTATGCTCCACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: REPYTLHTVDSG*KATRESLCSTS Trigger: GGAGGTGGAGCATAGGCTTTCCCTGGTGGCTTTCCACCCACTGTCCACTGTGTGGAGGGTATAGGGTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGTGATAGAGAACCCTATACCCTCCACACAGTGGACAGTGGGTGGAAAGCCCTCCTCCTGCTGGCATaGGACACTGCCCCAGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: ESDREPYTLHTVDSGWKALLLLA*DTAPVH Trigger: ATGTACTGGGGCAGTGTCCAATGCCAGCAGGAGGAG...GGCTTTCCACCCACTGTCCACTGTGTGGAGGGTATAGGGTTCTCTATCACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR GCA 72 bp | AGGGTTTCCCCCTCCTCCCCTTACCTATGGCTTTGCTaGAGAGCCCAAGATAGGAGAAACAGGAGAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVSPSSPYLWLC*RAQDRRNRRGE Trigger: CTCTCCTCTCCTGTTTCTCCTATCTTGGGCTCTGCAGCAAAGCCATAGGTAAGGGGAGGAGGGGGAAACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCAAATACAAAAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCGGTCTGCGGCTCAGTTaGTGGCAAGTAAGGGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CFKYKRRDRKVRPHGARSGLRLS*WQVRVW Trigger: CCAAACCCTTACTTGCCACAAACTGAGCCGCAGACC...GGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTTTTGTATTTGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCAAGGGACCTCTCCTGTACTGGACAACAGAGGGAGCCAGGTGCATTCTGACTAGGACAGGACTTTaGCTTAAGAAGGAGGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGKGPLLYWTTEGARCILTRTGL*LKKEGD Trigger: GTCACCCTCCTTCTTAAGCAAAAGTCCTGTCCTAGT...CAGAATGCACCTGGCTCCCTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CCA 72 bp | CCAGTACATGCTGGGGAAGTCTACTCGGCTTCCCAATaGGCAGGGCATCTGCAAAGGAAAAGAGAGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PVHAGEVYSASQ*AGHLQRKREML Trigger: AAGCATCTCTCTTTTCCTTTGCAGATGCCCTGCCCATTGGGAAGCCGAGTAGACTTCCCCAGCATGTACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAGACGCAGTAGAATTCCAAGTCCTACCTGTAGCAGGAAGAGCCCAGAACAAGCTAAGACTTGGCAATTaGAGGTGTGGGGACACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ADAVEFQVLPVAGRAQNKLRLGN*RCGDTA Trigger: AGCAGTGTCCCCACACCTCAAATTGCCAAGTCTTAG...CTTGTTCTGGGCTCTTCCTGCTACAGGTAGGACTTGGAATTCTACTGCGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR TCA 72 bp | AAAAAGCCACCTTGGGTGGAGGCTAGCATAACATCTTaGAGACACTGGGGAAGTATGCTGCCTGGGAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KKPPWVEASITS*RHWGSMLPGKC Trigger: GCACTTCCCAGGCAGCATACTTCCCCAGTGTCTTCAAGATGTTATGCTAGCCTCCACCCAAGGTGGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR GCA 72 bp | GGATGGGTGGGATCAAGAGAACTAGGACAGGACTTTTaGTTAAGAAGGAGGGTGACAGGAACATGGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GWVGSRELGQDF*LRRRVTGTWGA Trigger: TGCTCCCCATGTTCCTGTCACCCTCCTTCTTAAGCAAAAGTCCTGTCCTAGTTCTCTTGATCCCACCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CCA 72 bp | CATAACATCTTGAAGACACTGGGGAAGTATGCTGCCTaGGAAGTGCGCATACAGAGGGACTCTCTCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HNILKTLGKYAA*EVRIQRDSLLR Trigger: TCTCAGGAGAGAGTCCCTCTGTATGCGCACTTCCCAGGCAGCATACTTCCCCAGTGTCTTCAAGATGTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CCA 72 bp | CTTTGGGTCCCCAAGAGGATATTCAGCAAGGGTGGCTaGCACTTTTCTCCTTGTCCTTCTCCTAGATTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LWVPKRIFSKGG*HFSPCPSPRLA Trigger: AGCCAATCTAGGAGAAGGACAAGGAGAAAAGTGCCAGCCACCCTTGCTGAATATCCTCTTGGGGACCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR TCA 72 bp | GGGTCTTTCTCTGCTTGGAGACAGTTCTCCTATAGTTaGGGATTCCCACTTCCTGTAAGCCTAAGGGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSFSAWRQFSYS*GFPLPVSLRAW Trigger: CCAAGCCCTTAGGCTTACAGGAAGTGGGAATCCTCAACTATAGGAGAACTGTCTCCAAGCAGAGAAAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | GCTGGCACCCTGGCCCTCGGGGACTGGAAGCCTTGGGCAAGGGACCTCTCCTGTGCTGCAGCGCGCTGGTaGCTGGAGCTGTGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGTLALGDWKPWARDLSCAAARW*LELCWG Trigger: TCCCCAGCACAGCTCCAGCCACCAGCGCGCTGCAGC...ACAGGAGAGGTCCCTTGCCCAAGGCTTCCAGTCCCCGAGGGCCAGGGTGCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | GCTGGCACCCTGGCCCTCGGGGACTGGAAGCCTTGGGCAAGGGACCTCTCCTGTGGGTCAGGCCAACACTaGGCACAGGCAGGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTLALGDWKPWARDLSCGSGQH*AQAGRA Trigger: AGCCCTGCCTGCCTGTGCCCAGTGTTGGCCTGACCC...ACAGGAGAGGTCCCTTGCCCAAGGCTTCCAGTCCCCGAGGGCCAGGGTGCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | GGACTCTCTCCTGAGAAGCCCTTTGGAGGATGGGGCAGTCATGGGGGACTTGCCGCTGCCCTCCCTGGCTaGGGTGGCTGCCTCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSPEKPFGGWGSHGGLAAALPG*GGCLAP Trigger: GGGAGCGAGGCAGCCACCGCAGCCAGGGAGGGCAGC...GGCAAGTCCCCCATGACTGCCCCATCCTCCAAAGGGCTTCTCAGGAGAGAGTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGGCACCCTGGCCTGGCGAAGCCTCCTGTaGGGATGGCCACACTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GKCGLMGQGPKGEAGTLAWRSLL*GWPHCR Trigger: TCGACAGTGTGGCCATCCTCACAGGAGGCTTCGCCA...GGCCAGGGTGCCAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR TCA 90 bp | GGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGGCACCCTGGCCTCAGGGGTCCCCAAGTaGGGTCCATCAGTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKCGLMGQGPKGEAGTLASGVPK*GPSVCR Trigger: CCTGCAGACTGATGGACCTCACTTGGGGACCCCTGA...GGCCAGGGTGCCAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGCCGTGCCGTGGAGTCTaGCGGGCCGTGTCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGQESAASWGKVPRGKLPCRGV*RAVSPK Trigger: CTTTGGAGACACGGCCCGGCAGACTCCACGGCACGG...CAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CAA 72 bp | GGAAGCTGGCACCCTGGCCCTCGGGGACTGGAAGCCTaGGGCAAGGGACCTCTCCTGTACTGGACAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSWHPGPRGLEA*GKGPLLYWTTE Trigger: CTCTGTTGTCCAGTACAGGAGAGGTCCCTTGCCCAAGGCTTCCAGTCCCCGAGGGCCAGGGTGCCAGCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR TCA 90 bp | TGTCCAAGTCTCCCTGAAAACTCTGCTCCACTGGGCCCAGTGCCCACCAACACCAGGACCGGCTGTCGATaGCCAAGGGTCCCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPSLPENSAPLGPVPTNTRTGCR*PRVPQA Trigger: GGCCTGGGGGACCCTTGGTCATCGACAGCCGGTCCT...GGTGTTGGTGGGCACTGGGCCCAGTGGAGCAGAGTTTTCAGGGAGACTTGGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGGGACACTAGGGTTTCCCCCTCCTCCCCTTACCTATGGCTTTGCTGCAGGAGAACACAGCGCCTaGACCCTGCGCGCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGTLGFPPPPLTYGFAAGEHSA*TLRALG Trigger: CCCGAGGGCGCGCAGGGTCCAGGCGCTGTGTTCTCC...TGCAGCAAAGCCATAGGTAAGGGGAGGAGGGGGAAACCCTAGTGTCCCTGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | GGACTCTCTCCTGAGAAGCCCTTTGGAGGATGGGGCAGTCATGGGGGACTTGCCTGGTGGCTGGAGCTGTaGTGGGGATCGGAGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSPEKPFGGWGSHGGLAWWLEL*WGSEHP Trigger: GGGATGCTCCGATCCCCAGCACAGCTCCAGCCACCA...GGCAAGTCCCCCATGACTGCCCCATCCTCCAAAGGGCTTCTCAGGAGAGAGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | GGACTCTCTCCTGAGAAGCCCTTTGGAGGATGGGGCAGTCATGGGGGACTTGCCCCAGAGAAGCTGGTTTaGTTGCCCAGGGCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSPEKPFGGWGSHGGLAPEKLV*LPRAAS Trigger: GCTGGCAGCCCTGGGCAAGCAAACCAGCTTCTCTGG...GGCAAGTCCCCCATGACTGCCCCATCCTCCAAAGGGCTTCTCAGGAGAGAGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | TGTCCAAGTCTCCCTGAAAACTCTGCTCCACTGGGCCCAGTGCCCACCAACACCCAGGAAGCTGTCTGCTaGCAGCACGCTGGCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CPSLPENSAPLGPVPTNTQEAVC*QHAGIS Trigger: CGAGATGCCAGCGTGCTGGCAGCAGACAGCTTCCTG...GGTGTTGGTGGGCACTGGGCCCAGTGGAGCAGAGTTTTCAGGGAGACTTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCTACTCGGCTTCCCAATGGGCAGGGCATCTGCAAAGGAAAAGAGAGATCCTCCCTGGCTGCGGTaGCTGCCTCGCTCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLGFPMGRASAKEKRDPPWLR*LPRSQW Trigger: CCACTGGGAGCGAGGCAGCCACCGCAGCCAGGGAGG...ATCTCTCTTTTCCTTTGCAGATGCCCTGCCCATTGGGAAGCCGAGTAGACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGATAGAGAACCCTATACCCTCCACACAGTGGACAGTGGGTGGAAAGCCCAGCGCGCTGGTGGCTaGAGCTGTGCTGGGGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESDREPYTLHTVDSGWKAQRAGG*SCAGDR Trigger: CCGATCCCCAGCACAGCTCCAGCCACCAGCGCGCTG...GGCTTTCCACCCACTGTCCACTGTGTGGAGGGTATAGGGTTCTCTATCACTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTAGGCGGTTGGTGTCCTaGAGGCGGTCAGAGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAYAPPPPTQRSGELRPPRRLVS*RRSEER Trigger: CCTCTCCTCTGACCGCCTCCAGGACACCAACCGCCT...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGGGACACTAGGGTTTCCCCCTCCTCCCCTTACCTATGGCTTTGCTGCAGTCACTTTTCCCTGCTaGAGGCGCCGCTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAGTLGFPPPPLTYGFAAVTFPC*RRRFTS Trigger: GCTGGTGAAGCGGCGCCTTCAGCAGGGAAAAGTGAC...TGCAGCAAAGCCATAGGTAAGGGGAGGAGGGGGAAACCCTAGTGTCCCTGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCACCAGGGAAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGGGGAAAAGGAACGCTTaGGGCGGTTGGTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESHQGKPMLHLPQHKGVGGKRNA*GGWCPG Trigger: TCCAGGACACCAACCGCCTCAAGCGTTCCTTTTCCC...CCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTTCCCTGGTGGCTTTC 59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGGACAGGAAAGTGCGGCCTCATGGGGCAAGGTCCCAAGGGGGAAGCTGTACTACTACTACTGCTaGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEGQESAASWGKVPRGKLYYYYC*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGTAGTA...CAGCTTCCCCCTTGGGACCTTGCCCCATGAGGCCGCACTTTCCTGTCCCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAGGTGCATTCTGGGCCATTCCAGTGCCGGCAGTGACCAGGTAAGAGTGTGTACGCGATGGCAATaGTGGCAGAGCGAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GARCILGHSSAGSDQVRVCTRWQ*WQSERC Trigger: GCATCTCTCGCTCTGCCACCATTGCCATCGCGTACA...CACTCTTACCTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | GAGAGTGATAGAGAACCCTATACCCTCCACACAGTGGACAGTGGGTGGAAAGCCCACCACCACCACCGCTaGTGCTGCTGTTACCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESDREPYTLHTVDSGWKAHHHHR*CCCYRV Trigger: GACCCGGTAACAGCAGCAGCAGCGGTGGTGGTGGTG...GGCTTTCCACCCACTGTCCACTGTGTGGAGGGTATAGGGTTCTCTATCACTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | AAAGCCTATGCTCCACCTCCCCCAACACAAAGGAGTGGGGAGCTGAGACCTCCTAGAAGCTGGTTTGCTTaGCCAGGGCTGCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAYAPPPPTQRSGELRPPRSWFA*PGLPAP Trigger: AGGAGCTGGCAGCCCTGGGCAAGCAAACCAGCTTCT...AGGAGGTCTCAGCTCCCCACTCCTTTGTGTTGGGGGAGGTGGAGCATAGGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGTATCTATCTCTATGCCACTAAGACTTGGCAATTTGAGGTGTGGGGACCCGGGCTGTCTGGGCTaGGCGAGGGCAGGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKVSISMPLRLGNLRCGDPGCLG*ARAGPV Trigger: CACTGGGCCTGCCCTCGCCCAGCCCAGACAGCCCGG...GTCCCCACACCTCAAATTGCCAAGTCTTAGTGGCATAGAGATAGATACCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | CCCCGTGTATCCAGGATAGATGCCATATCTCCATCAAGAGAGGGGAGGAACCAGGGACAGGAAGCTGTCTaGTGCCAGCACGCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRVSRIDAISPSREGRNQGQEAV*CQHAGI Trigger: GATGCCAGCGTGCTGGCAGCAGACAGCTTCCTGTCC...CTGGTTCCTCCCCTCTCTTGATGGAGATATGGCATCTATCCTGGATACACGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | CCCCGTGTATCCAGGATAGATGCCATATCTCCATCAAGAGAGGGGAGGAACCAGGCGCCTCTTGAACTGTaGATCTGCAGCAGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRVSRIDAISPSREGRNQAPLEL*ICSRLL Trigger: GAGGAGCCTGCTGCAGATGCACAGTTCAAGAGGCGC...CTGGTTCCTCCCCTCTCTTGATGGAGATATGGCATCTATCCTGGATACACGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | CCCCGTGTATCCAGGATAGATGCCATATCTCCATCAAGAGAGGGGAGGAACCAGGCTGAGAGAGGCTCATaGACGGTAGAGTGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSRIDAISPSREGRNQAERGS*TVEWQA Trigger: AGCCTGCCACTCTACCGTCCATGAGCCTCTCTCAGC...CTGGTTCCTCCCCTCTCTTGATGGAGATATGGCATCTATCCTGGATACACGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CAA 72 bp | GTCCTACCTGTAGCAGGAAGAGCCCAGAACAAGAGCTaGACTCTACCCCCATTCTTACTGGGCCTAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPVAGRAQNKS*TLPPFLLGLEL Trigger: GAGCTCTAGGCCCAGTAAGAATGGGGGTAGAGTCAAGCTCTTGTTCTGGGCTCTTCCTGCTACAGGTAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CAA 72 bp | GGGGAGCTGAGACCTCCTCCATCTTGTCTGCTCACTTaGGGGAGACCAGGGTCATGTGTAAGTGAGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GELRPPPSCLLT*GRPGSCVSENR Trigger: TCTGTTCTCACTTACACATGACCCTGGTCTCCCCAAAGTGAGCAGACAAGATGGAGGAGGTCTCAGCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| 3UTR CAA 72 bp | AACACAAAGGAGTGGGGAGCTGAGACCTCCTCCATCTaGTCTGCTCACTTTGGGGAGACCAGGGTCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTKEWGAETSSI*SAHFGETRVMC Trigger: ACACATGACCCTGGTCTCCCCAAAGTGAGCAGACAAGATGGAGGAGGTCTCAGCTCCCCACTCCTTTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCTACTCGGCTTCCCAATGGGCAGGGCATCTGCAAAGGAAAAGAGAGATCGCTGGCATCTCGTGTaGTCTGGTCATACACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLGFPMGRASAKEKRDRWHLV*SGHTPL Trigger: TAGTGGTGTATGACCAGAGCACACGAGATGCCAGCG...ATCTCTCTTTTCCTTTGCAGATGCCCTGCCCATTGGGAAGCCGAGTAGACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
||
| CDS-3UTR CCA 90 bp | AGTCCTACCTGTAGCAGGAAGAGCCCAGAACAAGAGCTTGACTCTACCCCCATTACAGAGCTCAGCACGTaGCAGCTGTTATACTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SPTCSRKSPEQELDSTPITELST*QLLYST Trigger: CGTGGAGTATAACAGCTGCCACGTGCTGAGCTCTGT...AATGGGGGTAGAGTCAAGCTCTTGTTCTGGGCTCTTCCTGCTACAGGTAGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS-3UTR CCA 90 bp | GGAAGTCTACTCGGCTTCCCAATGGGCAGGGCATCTGCAAAGGAAAAGAGAGATCACCACTACATCCTGTaGTTCTGTGGCATCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: GSLLGFPMGRASAKEKRDHHYIL*FCGIHL Trigger: CAGGTGGATGCCACAGAACCACAGGATGTAGTGGTG...ATCTCTCTTTTCCTTTGCAGATGCCCTGCCCATTGGGAAGCCGAGTAGACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS-3UTR GCA 90 bp | GAGAAGGTATCTATCTCTATGCCACTAAGACTTGGCAATTTGAGGTGTGGGGACCTTGAACTGTGCATCTaGAGCAGGCTCCTCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EKVSISMPLRLGNLRCGDLELCI*SRLLGP Trigger: TGGCCCGAGGAGCCTGCTGCAGATGCACAGTTCAAG...GTCCCCACACCTCAAATTGCCAAGTCTTAGTGGCATAGAGATAGATACCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CAA 72 bp | AGGATGGGTGGGATCAAGAGAACTAGGACAGGACTTTaGCTTAAGAAGGAGGGTGACAGGAACATGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RMGGIKRTRTGL*LKKEGDRNMGS Trigger: GCTCCCCATGTTCCTGTCACCCTCCTTCTTAAGCAAAAGTCCTGTCCTAGTTCTCTTGATCCCACCCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS-3UTR TCA 90 bp | AGTCCTACCTGTAGCAGGAAGAGCCCAGAACAAGAGCTTGACTCTACCCCCATTCCGCTTCACCAGCTTTaGACAGCAGATATTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: SPTCSRKSPEQELDSTPIPLHQL*TADIHR Trigger: TCTGTGAATATCTGCTGTTCAAAGCTGGTGAAGCGG...AATGGGGGTAGAGTCAAGCTCTTGTTCTGGGCTCTTCCTGCTACAGGTAGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| 3UTR CAA 72 bp | AAGGTATCTATCTCTATGCCACTAAGACTTGGCAATTaGAGGTGTGGGGACACTGCTAGTGGGGCCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KVSISMPLRLGN*RCGDTASGAFC Trigger: GCAGAAGGCCCCACTAGCAGTGTCCCCACACCTCAAATTGCCAAGTCTTAGTGGCATAGAGATAGATACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 90 bp | GGCAGCCCGGGCGCCGACAGGGCCGAGAGGCCGTGCCGTGGAGTCTaGCGGGCCGTGTCTCCAAAGTTCAGGCCCAGACCATGCGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GSPGADRAERPCRGV*RAVSPKFRPRPCAG Trigger: CCCCGCGCATGGTCTGGGCCTGAACTTTGGAGACACGGCCCGGCAGACTCCACGGCACGGCCTCTCGGCCCTGTCGGCGCCCGGGCTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS CCA 90 bp | GGTGGCTGGAGCTGTGCTGGGGATCGGAGCATCCCCTCCAGCACTTaGGCTGCCCTCCCTGGCTGCGGTGGCTGCCTCGCTCCCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: GGWSCAGDRSIPSST*AALPGCGGCLAPSG Trigger: GCCACTGGGAGCGAGGCAGCCACCGCAGCCAGGGAGGGCAGCCCAAGTGCTGGAGGGGATGCTCCGATCCCCAGCACAGCTCCAGCCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 90 bp | TACTACTACTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTGCTGCTGCCGCCGCCGCCGCCGCCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: YYYYCCCCCCCCCCC*CCCCCCCRRRRRRR Trigger: GCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGTAGTA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 90 bp | ACCACCACCACCGCTGCTGCTGCTGTTACCGGGTCCAGGTGCGCCTaGACTTACCCGGCCAAAGGCGGAGAACACAGCGCCTGGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: TTTTAAAAVTGSRCA*TYPAKGGEHSAWTL Trigger: CAGGGTCCAGGCGCTGTGTTCTCCGCCTTTGGCCGGGTAAGTGCAGGCGCACCTGGACCCGGTAACAGCAGCAGCAGCGGTGGTGGTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 90 bp | ACCACCACCACCACCACCGCTGCTGCTGCTGTTACCGGGTCCAGGTaGGCCTGCACTTACCCGGCCAAAGGCGGAGAACACAGCGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TTTTTTAAAAVTGSR*ACTYPAKGGEHSAW Trigger: CCAGGCGCTGTGTTCTCCGCCTTTGGCCGGGTAAGTGCAGGCGCACCTGGACCCGGTAACAGCAGCAGCAGCGGTGGTGGTGGTGGTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS-3UTR CAA 90 bp | GGAGCCAGGTGCATTCTGGGCCATTCCAGTGCCGGCAGTGACCAGGTAAGAGTGGAGAAGCTGGTTTGCTaGCCCAGGGCTGCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GARCILGHSSAGSDQVRVEKLVC*PRAASS Trigger: GGAGCTGGCAGCCCTGGGCAAGCAAACCAGCTTCTC...CACTCTTACCTGGTCACTGCCGGCACTGGAATGGCCCAGAATGCACCTGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS CCA 90 bp | GACAGGAAGCTGTCTGCTGCCAGCACGCTGGCATCTCGTGTGCTCTaGTCATACACCACTACATCCTGTGGTTCTGTGGCATCCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: DRKLSAASTLASRVL*SYTTTSCGSVASTW Trigger: CCAGGTGGATGCCACAGAACCACAGGATGTAGTGGTGTATGACCAGAGCACACGAGATGCCAGCGTGCTGGCAGCAGACAGCTTCCTGTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039926.10 ENSMUST00000143661.2 |
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| CDS-3UTR CAA 90 bp | GCAGACGCAGTAGAATTCCAAGTCCTACCTGTAGCAGGAAGAGCCCAGAACAAGGGTAGAGTGGCAGGCTaGCCCTCACAGAGGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ADAVEFQVLPVAGRAQNKGRVAG*PSQRPG Trigger: CCCTGGCCTCTGTGAGGGCAAGCCTGCCACTCTACC...CTTGTTCTGGGCTCTTCCTGCTACAGGTAGGACTTGGAATTCTACTGCGTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS-3UTR CAA 90 bp | AGTCCTACCTGTAGCAGGAAGAGCCCAGAACAAGAGCTTGACTCTACCCCCATTAGGGAAAAGGAACGCTaGAGGCGGTTGGTGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPTCSRKSPEQELDSTPIREKER*RRLVSW Trigger: CCAGGACACCAACCGCCTCAAGCGTTCCTTTTCCCT...AATGGGGGTAGAGTCAAGCTCTTGTTCTGGGCTCTTCCTGCTACAGGTAGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS-3UTR CAA 90 bp | GCAGACGCAGTAGAATTCCAAGTCCTACCTGTAGCAGGAAGAGCCCAGAACAAGTGGCAGCTGCGCCTCTaGAACTGTGCATCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: ADAVEFQVLPVAGRAQNKWQLRL*NCASAA Trigger: TGCTGCAGATGCACAGTTCAAGAGGCGCAGCTGCCA...CTTGTTCTGGGCTCTTCCTGCTACAGGTAGGACTTGGAATTCTACTGCGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS CCA 72 bp | TCGGAGCATCCCCTCCAGCACTTGGGCTGCCCTCCCTaGCTGCGGTGGCTGCCTCGCTCCCAGTGGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: SEHPLQHLGCPP*LRWLPRSQWQR Trigger: GCGCTGCCACTGGGAGCGAGGCAGCCACCGCAGCCAGGGAGGGCAGCCCAAGTGCTGGAGGGGATGCTCCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 72 bp | TGCTGGGGATCGGAGCATCCCCTCCAGCACTTGGGCTaGCCTCCCTGGCTGCGGTGGCTGCCTCGCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: CWGSEHPLQHLG*PPWLRWLPRSQ Trigger: CTGGGAGCGAGGCAGCCACCGCAGCCAGGGAGGGCAGCCCAAGTGCTGGAGGGGATGCTCCGATCCCCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS CAA 90 bp | TGGTGGCTGGAGCTGTGCTGGGGATCGGAGCATCCCCTCCAGCACTaGGGCTGCCCTCCCTGGCTGCGGTGGCTGCCTCGCTCCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: WWLELCWGSEHPLQH*GCPPWLRWLPRSQW Trigger: CCACTGGGAGCGAGGCAGCCACCGCAGCCAGGGAGGGCAGCCCAAGTGCTGGAGGGGATGCTCCGATCCCCAGCACAGCTCCAGCCACCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 72 bp | CGCCGCCGCCACCACCACCACCACCACCACCGCTGCTaGTGCTGTTACCGGGTCCAGGTGCGCCTGCACTTA | + |
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Preference number: 6 (lower is better) Translates to: RRRHHHHHHHRC*CCYRVQVRLHL Trigger: TAAGTGCAGGCGCACCTGGACCCGGTAACAGCAGCAGCAGCGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 72 bp | ACCGCTGCTGCTGCTGTTACCGGGTCCAGGTGCGCCTaGACTTACCCGGCCAAAGGCGGAGAACACAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: TAAAAVTGSRCA*TYPAKGGEHSA Trigger: GGCGCTGTGTTCTCCGCCTTTGGCCGGGTAAGTGCAGGCGCACCTGGACCCGGTAACAGCAGCAGCAGCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 72 bp | ACCACCACCGCTGCTGCTGCTGTTACCGGGTCCAGGTaGGCCTGCACTTACCCGGCCAAAGGCGGAGAACAC | + |
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Preference number: 6 (lower is better) Translates to: TTTAAAAVTGSR*ACTYPAKGGEH Trigger: GTGTTCTCCGCCTTTGGCCGGGTAAGTGCAGGCGCACCTGGACCCGGTAACAGCAGCAGCAGCGGTGGTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 72 bp | TACTACTACTACTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: YYYYCCCCCCCC*CCCCCCCCCCR Trigger: GCGGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGTAGTA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039926.10 |
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| CDS GCA 72 bp | GGAAGCTGTCTGCTGCCAGCACGCTGGCATCTCGTGTaGTCTGGTCATACACCACTACATCCTGTGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSCLLPARWHLV*SGHTPLHPVVL Trigger: CAGAACCACAGGATGTAGTGGTGTATGACCAGAGCACACGAGATGCCAGCGTGCTGGCAGCAGACAGCTTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039926.10 ENSMUST00000143661.2 |
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| CDS CCA 72 bp | CTGTCTGCTGCCAGCACGCTGGCATCTCGTGTGCTCTaGTCATACACCACTACATCCTGTGGTTCTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSAASTLASRVL*SYTTTSCGSVA Trigger: TGCCACAGAACCACAGGATGTAGTGGTGTATGACCAGAGCACACGAGATGCCAGCGTGCTGGCAGCAGACAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039926.10 ENSMUST00000143661.2 |
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