Pregenerated sensors for DUSP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053716Ensembl transcript IDs: ENSMUST00000172306.3, ENSMUST00000173748.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCAGCCCTCTCAGGGGCGGAGCCCAGATGGCTAATGCTACTGCTTaGCACTCCCCTGCAGCACCACCTCCAGTAGGACCTGGCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: RSPLRGGAQMANATA*HSPAAPPPVGPGRE Trigger: CTCCCTGCCAGGTCCTACTGGAGGTGGTGCTGCAGGGGAGTGGCAAGCAGTAGCATTAGCCATCTGGGCTCCGCCCCTGAGAGGGCTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR GCA 90 bp | CCTTGCCCCACCTGCCCCAGCTCTTGGGCCGCAATAGGTGTAGGTTaGCTGCAGGTTAAAGGCACGGGCAACATGGGCCAGGGCAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: PCPTCPSSWAAIGVG*LQVKGTGNMGQGRC Trigger: ACACCTGCCCTGGCCCATGTTGCCCGTGCCTTTAACCTGCAGGCAACCTACACCTATTGCGGCCCAAGAGCTGGGGCAGGTGGGGCAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 90 bp | GCAGAGGCAAGGCCCCACCAGCCCCCAAGCCGCAAGTCTGAAAGCTaGGGCCAACGCTCGCTTAGCAACATGTCTGGAGAGCTGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: AEARPHQPPSRKSES*GQRSLSNMSGELRP Trigger: TGGCCTCAGCTCTCCAGACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCTGGTGGGGCCTTGCCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 90 bp | AACATGGGCCAGGGCAGGTGTGCACCTGGACAAGGGGGCTGGGGGTaGACCTCGTTGGAGTCTACAGCAAAGCTAAGGGACTGGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: NMGQGRCAPGQGGWG*TSLESTAKLRDWEG Trigger: GCCTTCCCAGTCCCTTAGCTTTGCTGTAGACTCCAACGAGGTTCACCCCCAGCCCCCTTGTCCAGGTGCACACCTGCCCTGGCCCATGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CCA 90 bp | TGCTACTGCTTGCCACTCCCCTGCAGCACCACCTCCAGTAGGACCTaGCAGGGAGGTCTGCAGGACTCTCAGAAGGTTGGTAGGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: CYCLPLPCSTTSSRT*QGGLQDSQKVGRRA Trigger: TGCCCTCCTACCAACCTTCTGAGAGTCCTGCAGACCTCCCTGCCAGGTCCTACTGGAGGTGGTGCTGCAGGGGAGTGGCAAGCAGTAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 90 bp | CTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTCTGGAGAGCTaGGGCCATCTGGCAAGTGCTGCCACAGGACCCTGCACAGGATGG | + |
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Preference number: 1 (lower is better) Translates to: LKAEANARLATCLES*GHLASAATGPCTGW Trigger: CCATCCTGTGCAGGGTCCTGTGGCAGCACTTGCCAGATGGCCTCAGCTCTCCAGACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR GCA 90 bp | CACTCCCCTGCAGCACCACCTCCAGTAGGACCTGGCAGGGAGGTCTaGAGGACTCTCAGAAGGTTGGTAGGAGGGCAGACAACACAAAGA | + |
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Preference number: 1 (lower is better) Translates to: HSPAAPPPVGPGREV*RTLRRLVGGQTTQR Trigger: TCTTTGTGTTGTCTGCCCTCCTACCAACCTTCTGAGAGTCCTGCAGACCTCCCTGCCAGGTCCTACTGGAGGTGGTGCTGCAGGGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 90 bp | TCCTGTTCCTCATGGTGCCTAGGGAGAAGCAAGGCTGAGAAGCGATaGAACCGGAGGAGTATTATGGAGCCCGTGGCTTTGTGCTATGGA | + |
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Preference number: 1 (lower is better) Translates to: SCSSWCLGRSKAEKR*NRRSIMEPVALCYG Trigger: TCCATAGCACAAAGCCACGGGCTCCATAATACTCCTCCGGTTTCATCGCTTCTCAGCCTTGCTTCTCCCTAGGCACCATGAGGAACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CCA 90 bp | CAACCTCAGGTCTGTGGATATGTCTTTAAAAATAGCCAGAATGGCTaGGCTATCAGCCGAATGGATGTCCTGGGGCAGAGGCAAGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QPQVCGYVFKNSQNG*AISRMDVLGQRQGP Trigger: GGGGCCTTGCCTCTGCCCCAGGACATCCATTCGGCTGATAGCCCAGCCATTCTGGCTATTTTTAAAGACATATCCACAGACCTGAGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR GCA 90 bp | GGTCCTGATGCCCAGAGAGTGACAACCCACCCTTCCAGAATGGCCTaGTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: GPDAQRVTTHPSRMA*WEIRLHTRAKCIWS Trigger: TGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTCTGGAAGGGTGGGTTGTCACTCTCTGGGCATCAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CCA 90 bp | CCTGATGCCCAGAGAGTGACAACCCACCCTTCCAGAATGGCCTGCTaGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: PDAQRVTTHPSRMAC*EIRLHTRAKCIWSR Trigger: TCTTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTCTGGAAGGGTGGGTTGTCACTCTCTGGGCATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR TCA 90 bp | TCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGTTCCTCCCAAGCCGCAAGTCTaGAAGCTGAGGCCAACGCTC | + |
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Preference number: 2 (lower is better) Translates to: SLPPAGVRPIRTPALPVPPKPQV*KLRPTL Trigger: GAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGG...AGGAACAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGCCCACCCTTCCAGAATaGCCTGCTGGGAAATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LSHCPLRVCVPSGPQHFLPTLPE*PAGKSD Trigger: GTCTGATTTCCCAGCAGGCCATTCTGGAAGGGTGGG...CAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGACTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAGGTGTGCACCTGGACAAGGGGGCTGGGGGTGAACCTCGTTGGAGTCTACCTGGCAGGGAGGTCTaGAGGACTCTCAGAAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: RAGVHLDKGAGGEPRWSLPGREV*RTLRRL Trigger: CAACCTTCTGAGAGTCCTGCAGACCTCCCTGCCAGG...TAGACTCCAACGAGGTTCACCCCCAGCCCCCTTGTCCAGGTGCACACCTGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCGAGCTCGGATTTACCTGCCAAAAGTAGCAACCTCAGGTCTGTGGATATGGGCCCCGTGGAGGGCTaGGAGACCCTGGTGCTGCGC | + |
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Preference number: 2 (lower is better) Translates to: PASSDLPAKSSNLRSVDMGPVEG*ETLVLR Trigger: GCGCAGCACCAGGGTCTCCCAGCCCTCCACGGGGCC...CATATCCACAGACCTGAGGTTGCTACTTTTGGCAGGTAAATCCGAGCTCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CAA 90 bp | CCTCCAGTAGGACCTGGCAGGGAGGTCTGCAGGACTCTCAGAAGGTaGGTAGGAGGGCAGACAACACAAAGACCACCAGTGCCCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: PPVGPGREVCRTLRR*VGGQTTQRPPVPTR Trigger: CCTGGTGGGCACTGGTGGTCTTTGTGTTGTCTGCCCTCCTACCAACCTTCTGAGAGTCCTGCAGACCTCCCTGCCAGGTCCTACTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | TCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGTTCCTCTCAGCCTGGTTCTCTaGACACAGGTGACATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SLPPAGVRPIRTPALPVPLSLVL*TQVTSV Trigger: CACAGATGTCACCTGTGTCCAGAGAACCAGGCTGAG...AGGAACAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTTGGGAGCTCAGCCACTaGTCAGCCTGGTTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SPQAASLKAEANARLATCWELSH*SAWFSG Trigger: TCCAGAGAACCAGGCTGAGCAGTGGCTGAGCTCCCA...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGGGAGAGAGAGAGAGAGAAACATGCCATGTACAGAATGGAAGTTTTTGTGGCCTCAGTCACTaGCCCCTGCGGGTGTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: GREGERERETCHVQNGSFCGLSH*PLRVCV Trigger: GACGCACACCCGCAGGGGGCAGTGACTGAGGCCACA...AAAACTTCCATTCTGTACATGGCATGTTTCTCTCTCTCTCTCTCCCTCCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGGGAGAGAGAGAGAGAGAAACATGCCATGTACAGAATGGAAGTTTTGCCGAATGGATGTCCTaGGGCAGAGGCAAGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GREGERERETCHVQNGSFAEWMS*GRGKAP Trigger: TGGGGCCTTGCCTCTGCCCCAGGACATCCATTCGGC...AAAACTTCCATTCTGTACATGGCATGTTTCTCTCTCTCTCTCTCCCTCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTCTGTCTTAGGAAAGGGGGTGAAATATTGGTTTATACAATCCATTGTCCCCACCAGGCCCCGTaGAGGGCTGGGAGACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSLCLRKGGEILVYTIHCPHQAP*RAGRPW Trigger: CCAGGGTCTCCCAGCCCTCCACGGGGCCTGGTGGGG...ACAATGGATTGTATAAACCAATATTTCACCCCCTTTCCTAAGACAGAGAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGGGAGAGAGAGAGAGAGAAACATGCCATGTACAGAATGGAAGTTTTGGGGCGGAGCCCAGATaGCTAATGCTACTGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: GREGERERETCHVQNGSFGAEPR*LMLLLA Trigger: GGCAAGCAGTAGCATTAGCCATCTGGGCTCCGCCCC...AAAACTTCCATTCTGTACATGGCATGTTTCTCTCTCTCTCTCTCCCTCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR GCA 90 bp | GAATGGCCTGCTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAAAGGCCATCTGGCAAGTaGTGCCACAGGACCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: EWPAGKSDFTHVQNAFGQRPSGK*CHRTLH Trigger: GTGCAGGGTCCTGTGGCAGCACTTGCCAGATGGCCT...TTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCACCTCCAGTAGGACCTaGCAGGGAGGTCTGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SKTGHPLVYPHLHSDPCFTSSRT*QGGLQD Trigger: GTCCTGCAGACCTCCCTGCCAGGTCCTACTGGAGGT...GAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGTTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR TCA 90 bp | GAATGGCCTGCTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAAACATGTCTGGAGAGCTaGGGCCATCTGGCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: EWPAGKSDFTHVQNAFGQTCLES*GHLASA Trigger: AGCACTTGCCAGATGGCCTCAGCTCTCCAGACATGT...TTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCGTTCAGAGACAGAGATaGGGACAGAAGTGGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SKTGHPLVYPHLHSDPCFVQRQR*GQKWWA Trigger: TGCCCACCACTTCTGTCCTCATCTCTGTCTCTGAAC...GAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | TTACCTGCCAAAAGTAGCAACCTCAGGTCTGTGGATATGTCTTTAAAAATAGCCGGGCTATCAGCCGAATaGATGTCCTGGGGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPAKSSNLRSVDMSLKIAGLSAE*MSWGRG Trigger: GCCTCTGCCCCAGGACATCCATTCGGCTGATAGCCC...GGCTATTTTTAAAGACATATCCACAGACCTGAGGTTGCTACTTTTGGCAGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAACTGTGGCAAGATTTTAAACTGCTTCCCTAAAGAATCCCTGAAAACCAGCGGCACTGAGGTGGGCTaGGTCACAGGTAGGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LNCGKILNCFPKESLKTSGTEVG*VTGRKW Trigger: CCATTTCCTACCTGTGACCCAGCCCACCTCAGTGCC...GCTGGTTTTCAGGGATTCTTTAGGGAAGCAGTTTAAAATCTTGCCACAGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | TTACCTGCCAAAAGTAGCAACCTCAGGTCTGTGGATATGTCTTTAAAAATAGCCAGAGCTGAGGCCATCTaGCAAGTGCTGCCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LPAKSSNLRSVDMSLKIARAEAI*QVLPQD Trigger: GTCCTGTGGCAGCACTTGCCAGATGGCCTCAGCTCT...GGCTATTTTTAAAGACATATCCACAGACCTGAGGTTGCTACTTTTGGCAGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGGGAGAGAGAGAGAGAGAAACATGCCATGTACAGAATGGAAGTTTTCACACACGTGCAAAATaGATTTGGTCAAGAACATGG | + |
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Preference number: 2 (lower is better) Translates to: GREGERERETCHVQNGSFHTRAK*IWSRTW Trigger: CCATGTTCTTGACCAAATGCATTTTGCACGTGTGTG...AAAACTTCCATTCTGTACATGGCATGTTTCTCTCTCTCTCTCTCCCTCCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR TCA 90 bp | TTACCTGCCAAAAGTAGCAACCTCAGGTCTGTGGATATGTCTTTAAAAATAGCCTTCTCTGGACACAGGTaGCATCTGTGGGTTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LPAKSSNLRSVDMSLKIAFSGHR*HLWVLQ Trigger: CTGAAGAACCCACAGATGTCACCTGTGTCCAGAGAA...GGCTATTTTTAAAGACATATCCACAGACCTGAGGTTGCTACTTTTGGCAGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAACTGTGGCAAGATTTTAAACTGCTTCCCTAAAGAATCCCTGAAAACCAGCTCCAGAATGGCCTGCTaGGAAATCAGACTTCACACA | + |
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Preference number: 2 (lower is better) Translates to: LNCGKILNCFPKESLKTSSRMAC*EIRLHT Trigger: TGTGTGAAGTCTGATTTCCCAGCAGGCCATTCTGGA...GCTGGTTTTCAGGGATTCTTTAGGGAAGCAGTTTAAAATCTTGCCACAGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCCGATGGTTTGCTTTTTaGAACAAGAAACTGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: SKTGHPLVYPHLHSDPCFRWFAF*NKKLRT Trigger: TGTTCTCAGTTTCTTGTTTCAAAAAGCAAACCATCG...GAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGTTTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAACTGTGGCAAGATTTTAAACTGCTTCCCTAAAGAATCCCTGAAAACCAGCCGTGCAAAATGCATTTaGTCAAGAACATGGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LNCGKILNCFPKESLKTSRAKCI*SRTWGL Trigger: CAAACCCCATGTTCTTGACCAAATGCATTTTGCACG...GCTGGTTTTCAGGGATTCTTTAGGGAAGCAGTTTAAAATCTTGCCACAGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CCA 72 bp | GCCAGAATGGCTGGGCTATCAGCCGAATGGATGTCCTaGGGCAGAGGCAAGGCCCCACCAGCCCCCAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: ARMAGLSAEWMS*GRGKAPPAPKP Trigger: CGGCTTGGGGGCTGGTGGGGCCTTGCCTCTGCCCCAGGACATCCATTCGGCTGATAGCCCAGCCATTCTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR GCA 72 bp | AACCAGCCCTGTGAGGTAAGATGTGGCCTCAGTCACTaGCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NQPCEVRCGLSH*PLRVCVPSGPQ Trigger: CTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGACTGAGGCCACATCTTACCTCACAGGGCTGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR GCA 72 bp | CTCAGGGGCGGAGCCCAGATGGCTAATGCTACTGCTTaGCACTCCCCTGCAGCACCACCTCCAGTAGGACCT | + |
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Preference number: 3 (lower is better) Translates to: LRGGAQMANATA*HSPAAPPPVGP Trigger: AGGTCCTACTGGAGGTGGTGCTGCAGGGGAGTGGCAAGCAGTAGCATTAGCCATCTGGGCTCCGCCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 72 bp | GAGGCCAACGCTCGCTTAGCAACATGTCTGGAGAGCTaGGGCCATCTGGCAAGTGCTGCCACAGGACCCTGC | + |
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Preference number: 3 (lower is better) Translates to: EANARLATCLES*GHLASAATGPC Trigger: GCAGGGTCCTGTGGCAGCACTTGCCAGATGGCCTCAGCTCTCCAGACATGTTGCTAAGCGAGCGTTGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 72 bp | AGGCCCCACCAGCCCCCAAGCCGCAAGTCTGAAAGCTaGGGCCAACGCTCGCTTAGCAACATGTCTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: RPHQPPSRKSES*GQRSLSNMSGE Trigger: CTCTCCAGACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCTGGTGGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 72 bp | GAGACAGAGATGAGGACAGAAGTGGTGGGCAGTTTATaGAAGGGCCAGGGCGCAGCCCTCTCAGGGGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: ETEMRTEVVGSL*KGQGAALSGAE Trigger: CTCCGCCCCTGAGAGGGCTGCGCCCTGGCCCTTTCATAAACTGCCCACCACTTCTGTCCTCATCTCTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 72 bp | CAGGGCAGGTGTGCACCTGGACAAGGGGGCTGGGGGTaGACCTCGTTGGAGTCTACAGCAAAGCTAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: QGRCAPGQGGWG*TSLESTAKLRD Trigger: GTCCCTTAGCTTTGCTGTAGACTCCAACGAGGTTCACCCCCAGCCCCCTTGTCCAGGTGCACACCTGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR GCA 72 bp | GCAGCACCACCTCCAGTAGGACCTGGCAGGGAGGTCTaGAGGACTCTCAGAAGGTTGGTAGGAGGGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: AAPPPVGPGREV*RTLRRLVGGQT Trigger: TGTCTGCCCTCCTACCAACCTTCTGAGAGTCCTGCAGACCTCCCTGCCAGGTCCTACTGGAGGTGGTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CCA 72 bp | CATCTGGCAAGTGCTGCCACAGGACCCTGCACAGGATaGCATGGGAGCTCAGCCACTGCTCAGCCTGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: HLASAATGPCTG*HGSSATAQPGS Trigger: AGAACCAGGCTGAGCAGTGGCTGAGCTCCCATGCCATCCTGTGCAGGGTCCTGTGGCAGCACTTGCCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CCA 72 bp | CCACTAGCCAGTCCTTGCCCCACCTGCCCCAGCTCTTaGGCCGCAATAGGTGTAGGTTGCCTGCAGGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: PLASPCPTCPSS*AAIGVGCLQVK Trigger: TTTAACCTGCAGGCAACCTACACCTATTGCGGCCCAAGAGCTGGGGCAGGTGGGGCAAGGACTGGCTAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 72 bp | TCATGGTGCCTAGGGAGAAGCAAGGCTGAGAAGCGATaGAACCGGAGGAGTATTATGGAGCCCGTGGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SWCLGRSKAEKR*NRRSIMEPVAL Trigger: CAAAGCCACGGGCTCCATAATACTCCTCCGGTTTCATCGCTTCTCAGCCTTGCTTCTCCCTAGGCACCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR GCA 72 bp | GCCCAGAGAGTGACAACCCACCCTTCCAGAATGGCCTaGTGGGAAATCAGACTTCACACACGTGCAAAATGC | + |
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Preference number: 3 (lower is better) Translates to: AQRVTTHPSRMA*WEIRLHTRAKC Trigger: GCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTCTGGAAGGGTGGGTTGTCACTCTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR CCA 72 bp | GCAAGGCTGAGAAGCGATGAAACCGGAGGAGTATTATaGAGCCCGTGGCTTTGTGCTATGGATCCTGGGATG | + |
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Preference number: 3 (lower is better) Translates to: ARLRSDETGGVL*SPWLCAMDPGM Trigger: CATCCCAGGATCCATAGCACAAAGCCACGGGCTCCATAATACTCCTCCGGTTTCATCGCTTCTCAGCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| 3UTR TCA 72 bp | CACTGTGGGCCTCTATTCCCAGTTCAGAGACAGAGATaGGGACAGAAGTGGTGGGCAGTTTATGAAAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HCGPLFPVQRQR*GQKWWAVYERA Trigger: GGCCCTTTCATAAACTGCCCACCACTTCTGTCCTCATCTCTGTCTCTGAACTGGGAATAGAGGCCCACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| 3UTR CCA 72 bp | AAGCTAAGGGACTGGGAAGGCTTTACACAGGCACTGTaGGCCTCTATTCCCAGTTCAGAGACAGAGATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLRDWEGFTQAL*ASIPSSETEMR Trigger: CCTCATCTCTGTCTCTGAACTGGGAATAGAGGCCCACAGTGCCTGTGTAAAGCCTTCCCAGTCCCTTAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCTGGGTTCAAACCAAGAAGAGCTaGAACTCTGCTCCAGCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TGHPLVYPHLHSDPCFWVQTKKS*NSAPAS Trigger: GCTCGCTGGAGCAGAGTTCAAGCTCTTCTTGGTTTG...AACCCAGAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | TCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGTTCCTGCACGGTGGCCGCCTTaGAGCGCGTGGCGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPPAGVRPIRTPALPVPARWPP*SAWRSA Trigger: AGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGC...AGGAACAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | TCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGTTCCTCATGTGCGCCCGCACTaGGGGCCCGCGGAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPPAGVRPIRTPALPVPHVRPH*GPAELV Trigger: AACCAGCTCCGCGGGCCCCCAGTGCGGGCGCACATG...AGGAACAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGCCGCCTTGCAGCGCGTaGCGAAGCGCTCCTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPLRVCVPSGPQHFLPPCSA*RSAPCR Trigger: CCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGG...CAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGACTGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGTCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGCCGACTCAGTGGCACTaGTGGGCAGCTCTCGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPLRVCVPSGPQHFLPTQWH*WAALGP Trigger: CGGACCGAGAGCTGCCCAGCAGTGCCACTGAGTCGG...CAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGACTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTGCCACTCGGCGCTCTTaGAGGGCATGGCCCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQAASLKAEANARLATCATRRS*RAWPPL Trigger: GAGCGGGGGCCATGCCCTGCAAGAGCGCCGAGTGGC...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGTCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGGATTCGAAGAGCTCGTaGGGCCGGCAATCTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPLRVCVPSGPQHFLDSKSS*GRQSSS Trigger: GCTGCTAGATTGCCGGCCGCACGAGCTCTTCGAATC...CAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGACTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | AGCAACATGTCTGGAGAGCTGAGGCCATCTGGCAAGTGCTGCCACAGGACCCTGCGTAGAGCAGCACGGTaGCCGCCTTGCAGCGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNMSGELRPSGKCCHRTLRRAAR*PPCSAW Trigger: CCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACG...CAGGGTCCTGTGGCAGCACTTGCCAGATGGCCTCAGCTCTCCAGACATGTTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | TCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGTTCCTACTCAGTGGCACTGCTaGGCAGCTCTCGGTCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLPPAGVRPIRTPALPVPTQWHC*AALGPT Trigger: AGTCGGACCGAGAGCTGCCCAGCAGTGCCACTGAGT...AGGAACAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | TCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGTTCCTGTGAACTCACCACCGTaGTCAAAGGCGTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPPAGVRPIRTPALPVPVNSPP*SKALGR Trigger: CCTGCCCAACGCCTTTGAGCACGGTGGTGAGTTCAC...AGGAACAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGTGTGCACCTGGACAAGGGGGCTGGGGGTGAACCTCGTTGGAGTCTACGCTCCTTGTCGGCATaGTTGGGAATGATGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGVHLDKGAGGEPRWSLRSLSA*LGMMER Trigger: CCGCTCCATCATTCCCAACCATGCCGACAAGGAGCG...TAGACTCCAACGAGGTTCACCCCCAGCCCCCTTGTCCAGGTGCACACCTGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGCACTTCCTGTTCCTCATGGTGCCTAGGGAGAAGCAAGGCTGAGAAGCGAGCTGCCACTCCGCCGTaGCCTCGTCGTAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSTSCSSWCLGRSKAEKRAATPP*PRRRAA Trigger: TGCTGCTCTACGACGAGGCCACGGCGGAGTGGCAGC...TCGCTTCTCAGCCTTGCTTCTCCCTAGGCACCATGAGGAACAGGAAGTGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGTCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGGGATTTGCTTGTAGGTaGACTCACCACCGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPLRVCVPSGPQHFLGFACR*THHRAQ Trigger: TTGAGCACGGTGGTGAGTTCACCTACAAGCAAATCC...CAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGACTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | ACCTCGTTGGAGTCTACAGCAAAGCTAAGGGACTGGGAAGGCTTTACACAGGCACCCGAAGTCGACATGTaGGCCCGCACTGGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSLESTAKLRDWEGFTQAPEVDM*ARTGGP Trigger: CGGGCCCCCAGTGCGGGCGCACATGTCGACTTCGGG...TGCCTGTGTAAAGCCTTCCCAGTCCCTTAGCTTTGCTGTAGACTCCAACGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGGTGTGCACCTGGACAAGGGGGCTGGGGGTGAACCTCGTTGGAGTCTAATGCCTGCTAGGCAGTaGACCAAGACACCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAGVHLDKGAGGEPRWSLMPARQ*TKTPHF Trigger: GAAGTGTGGTGTCTTGGTGCACTGCCTAGCAGGCAT...TAGACTCCAACGAGGTTCACCCCCAGCCCCCTTGTCCAGGTGCACACCTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | ACCTCGTTGGAGTCTACAGCAAAGCTAAGGGACTGGGAAGGCTTTACACAGGCAGCCTCCAGCTCCTCCTaGAGCCACTCGGCGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSLESTAKLRDWEGFTQAASSSS*SHSALL Trigger: CAAGAGCGCCGAGTGGCTGCAGGAGGAGCTGGAGGC...TGCCTGTGTAAAGCCTTCCCAGTCCCTTAGCTTTGCTGTAGACTCCAACGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCTGGGTTTCGCTCCCGCTCCGATaGCTGCGCCGGACCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TGHPLVYPHLHSDPCFWVSLPLR*LRRTQI Trigger: GATCTGGGTCCGGCGCAGGCATCGGAGCGGGAGCGA...AACCCAGAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTAGTAGAGCTGCTCACTaGGTGCGTGGTTGTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SPQAASLKAEANARLATCSRAAH*VRGCRM Trigger: CATGCGACAACCACGCACCCAGTGAGCAGCTCTACT...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGGAGAGAGAGAGAGAGAAACATGCCATGTACAGAATGGAAGTTTTGGCCGGCTGGCTGGATaGTACAGGGCTGCCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GREGERERETCHVQNGSFGRLAG*YRAAIR Trigger: TCGGATGGCAGCCCTGTACCATCCAGCCAGCCGGCC...AAAACTTCCATTCTGTACATGGCATGTTTCTCTCTCTCTCTCTCCCTCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTTATGGTTGGTGGGCGTaGAGAAGTAGAGCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPQAASLKAEANARLATCYGWWA*RSRAAH Trigger: GTGAGCAGCTCTACTTCTCCACGCCCACCAACCATA...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGCACTTCCTGTTCCTCATGGTGCCTAGGGAGAAGCAAGGCTGAGAAGCGAATCGGGAACAGGTTATaGTTGGTGGGCGTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTSCSSWCLGRSKAEKRIGNRL*LVGVEK Trigger: CTTCTCCACGCCCACCAACCATAACCTGTTCCCGAT...TCGCTTCTCAGCCTTGCTTCTCCCTAGGCACCATGAGGAACAGGAAGTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | GAATGGCCTGCTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAAAGCGGATGGGCAGGTTaGCTTTGCGCAGGCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EWPAGKSDFTHVQNAFGQSGWAG*LCAGGA Trigger: TGCGCCGCCTGCGCAAAGGCAACCTGCCCATCCGCT...TTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCTGGGTTGGGCAGGATCTGGACTaGAAAGGCCGGCTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGHPLVYPHLHSDPCFWVGQDLD*KGRLAG Trigger: TCCAGCCAGCCGGCCTTTCCAGTCCAGATCCTGCCC...AACCCAGAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTACAGGTTATGGTTGGTaGGCGTGGAGAAGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQAASLKAEANARLATCTGYGW*AWRSRA Trigger: AGCTCTACTTCTCCACGCCCACCAACCATAACCTGT...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCTGGGTTGAGCTGCTCACTGGGTaGGTGGTTGTCGCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGHPLVYPHLHSDPCFWVELLTG*VVVAWA Trigger: AGCCCATGCGACAACCACGCACCCAGTGAGCAGCTC...AACCCAGAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | TTACCTGCCAAAAGTAGCAACCTCAGGTCTGTGGATATGTCTTTAAAAATAGCCCGCTCTTGCAGGGCATaGCCCCCGCTCCCGTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPAKSSNLRSVDMSLKIARSCRA*PPLPSS Trigger: CGACGACGGGAGCGGGGGCCATGCCCTGCAAGAGCG...GGCTATTTTTAAAGACATATCCACAGACCTGAGGTTGCTACTTTTGGCAGGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR TCA 90 bp | GAATGGCCTGCTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAACGGCATGGTTGGGAATaGTGGAGCGGATGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EWPAGKSDFTHVQNAFGQRHGWE*WSGWAG Trigger: ACCTGCCCATCCGCTCCATCATTCCCAACCATGCCG...TTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | GAATGGCCTGCTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAATCGTCTCGCAGCTTCTaGAGGAGCAGGCCGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: EWPAGKSDFTHVQNAFGQSSRSF*RSRPRT Trigger: CGTTCTCGGCCTGCTCCTGCAGAAGCTGCGAGACGA...TTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTTCGGAGTATTCCGTCTaGAACTTGTTGAAACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQAASLKAEANARLATCSEYSV*NLLKPP Trigger: AGGTGGTTTCAACAAGTTCCAGACGGAATACTCCGA...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | GAATGGCCTGCTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAATGCCATCCGACTCAGTaGCACTGCTGGGCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EWPAGKSDFTHVQNAFGQCHPTQ*HCWAAL Trigger: GAGAGCTGCCCAGCAGTGCCACTGAGTCGGATGGCA...TTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR TCA 90 bp | ACCTCGTTGGAGTCTACAGCAAAGCTAAGGGACTGGGAAGGCTTTACACAGGCAAGTCATAGGCGTCGTTaGGGGACAGGTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLESTAKLRDWEGFTQASHRRR*GTGSSS Trigger: AGAAGATGAACCTGTCCCTCAACGACGCCTATGACT...TGCCTGTGTAAAGCCTTCCCAGTCCCTTAGCTTTGCTGTAGACTCCAACGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | CTCAACTGTGGCAAGATTTTAAACTGCTTCCCTAAAGAATCCCTGAAAACCAGCTGCGTGGTTGTCGCATaGGCTGCTGAGCCCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNCGKILNCFPKESLKTSCVVVA*AAEPQR Trigger: ACGCTGGGGCTCAGCAGCCCATGCGACAACCACGCA...GCTGGTTTTCAGGGATTCTTTAGGGAAGCAGTTTAAAATCTTGCCACAGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTGTCTTAGGAAAGGGGGTGAAATATTGGTTTATACAATCCATTGTGTCCGACTCGCCGTCTaGGCAGTCAGAGCTGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLCLRKGGEILVYTIHCVRLAV*AVRADA Trigger: CGCATCAGCTCTGACTGCTCAGACGGCGAGTCGGAC...ACAATGGATTGTATAAACCAATATTTCACCCCCTTTCCTAAGACAGAGAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTGTCTTAGGAAAGGGGGTGAAATATTGGTTTATACAATCCATTGTGAAAGGCCGGCTGGCTaGATGGTACAGGGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLCLRKGGEILVYTIHCERPAG*MVQGCH Trigger: ATGGCAGCCCTGTACCATCCAGCCAGCCGGCCTTTC...ACAATGGATTGTATAAACCAATATTTCACCCCCTTTCCTAAGACAGAGAGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAAACTGGCCACCCTCTGGTATACCCTCATTTACACTCTGATCCATGTTTCGGAACAGGTTATGGTTaGTGGGCGTGGAGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKTGHPLVYPHLHSDPCFGTGYG*WAWRSR Trigger: TCTACTTCTCCACGCCCACCAACCATAACCTGTTCC...GAAACATGGATCAGAGTGTAAATGAGGGTATACCAGAGGGTGGCCAGTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR TCA 90 bp | CTCAACTGTGGCAAGATTTTAAACTGCTTCCCTAAAGAATCCCTGAAAACCAGCTGGACTCGAGCGTGTTaGTCGGGAACAGGTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNCGKILNCFPKESLKTSWTRAC*SGTGYG Trigger: ACCATAACCTGTTCCCGATCAACACGCTCGAGTCCA...GCTGGTTTTCAGGGATTCTTTAGGGAAGCAGTTTAAAATCTTGCCACAGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR GCA 90 bp | CTCAACTGTGGCAAGATTTTAAACTGCTTCCCTAAAGAATCCCTGAAAACCAGCATGGCCGTCTCAATGTaGGACGATTCGAAGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNCGKILNCFPKESLKTSMAVSM*DDSKSS Trigger: CGAGCTCTTCGAATCGTCGCACATTGAGACGGCCAT...GCTGGTTTTCAGGGATTCTTTAGGGAAGCAGTTTAAAATCTTGCCACAGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS GCA 90 bp | GCAGGGCATGGCCCCCGCTCCCGTCGTCGCTCCCGCTCCGATGCCTaGGCCGGACCCAGATCCCGCACCGGGCTCCGACCCCGCCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGHGPRSRRRSRSDA*AGPRSRTGLRPRPS Trigger: ACTCGGGCGGGGTCGGAGCCCGGTGCGGGATCTGGGTCCGGCGCAGGCATCGGAGCGGGAGCGACGACGGGAGCGGGGGCCATGCCCTGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS CCA 90 bp | GCGCCTCCAGCTCCTCCTGCAGCCACTCGGCGCTCTTGCAGGGCATaGCCCCCGCTCCCGTCGTCGCTCCCGCTCCGATGCCTGCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: APPAPPAATRRSCRA*PPLPSSLPLRCLRR Trigger: CCGGCGCAGGCATCGGAGCGGGAGCGACGACGGGAGCGGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCTGCAGGAGGAGCTGGAGGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS CCA 90 bp | GCTCGGGCTGCCACTCCGCCGTGGCCTCGTCGTAGAGCAGCACGGTaGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARAATPPWPRRRAAR*PPCSAWRSAPCRHG Trigger: ACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGACGAGGCCACGGCGGAGTGGCAGCCCGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS GCA 90 bp | CCGGCTGGCTGGATGGTACAGGGCTGCCATCCGACTCAGTGGCACTaGTGGGCAGCTCTCGGTCCGACTCGCCGTCTGAGCAGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGWMVQGCHPTQWH*WAALGPTRRLSSQS Trigger: GCTCTGACTGCTCAGACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACTGAGTCGGATGGCAGCCCTGTACCATCCAGCCAGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
||
| CDS TCA 90 bp | CCTTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCATGGTTGGGAATaGTGGAGCGGATGGGCAGGTTGCCTTTGCGCAGGCGGCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCSAWRSAPCRHGWE*WSGWAGCLCAGGAA Trigger: TGCTGCGCCGCCTGCGCAAAGGCAACCTGCCCATCCGCTCCATCATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS CCA 90 bp | ACGGTGGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCATaGTTGGGAATGATGGAGCGGATGGGCAGGTTGCCTTTGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVAALQRVAKRSLSA*LGMMERMGRLPLRR Trigger: CCTGCGCAAAGGCAACCTGCCCATCCGCTCCATCATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CAA 90 bp | AGCAACATGTCTGGAGAGCTGAGGCCATCTGGCAAGTGCTGCCACAGGACCCTGAGCCACTCGGCGCTCTaGCAGGGCATGGCCCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SNMSGELRPSGKCCHRTLSHSAL*QGMAPA Trigger: AGCGGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCT...CAGGGTCCTGTGGCAGCACTTGCCAGATGGCCTCAGCTCTCCAGACATGTTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
||
| CDS-3UTR CAA 90 bp | AGCAACATGTCTGGAGAGCTGAGGCCATCTGGCAAGTGCTGCCACAGGACCCTGCCGTGCTCAAAGGCGTaGGGCAGGTTGGGTGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: SNMSGELRPSGKCCHRTLPCSKA*GRLGVT Trigger: CGTCACACCCAACCTGCCCAACGCCTTTGAGCACGG...CAGGGTCCTGTGGCAGCACTTGCCAGATGGCCTCAGCTCTCCAGACATGTTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | CCAGCGAGCTCGGATTTACCTGCCAAAAGTAGCAACCTCAGGTCTGTGGATATGGAGCGGATGGGCAGGTaGCCTTTGCGCAGGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PASSDLPAKSSNLRSVDMERMGR*PLRRRR Trigger: GCGCCGCCTGCGCAAAGGCAACCTGCCCATCCGCTC...CATATCCACAGACCTGAGGTTGCTACTTTTGGCAGGTAAATCCGAGCTCGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | TCACTGCCCCCTGCGGGTGTGCGTCCCATCAGGACCCCAGCACTTCCTGTTCCTCTTGTTGAAACCACCTaGGAGGTAGTAGGCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SLPPAGVRPIRTPALPVPLVETT*EVVGLA Trigger: TGCCAGGCCTACTACCTCCAAGGTGGTTTCAACAAG...AGGAACAGGAAGTGCTGGGGTCCTGATGGGACGCACACCCGCAGGGGGCAGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTGTGGCGAAGCGCTCCTaGTCGGCATGGTTGGGAATG | + |
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Preference number: 5 (lower is better) Translates to: SPQAASLKAEANARLATCVAKRS*SAWLGM Trigger: CATTCCCAACCATGCCGACAAGGAGCGCTTCGCCAC...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | GAATGGCCTGCTGGGAAATCAGACTTCACACACGTGCAAAATGCATTTGGTCAAAGCACGGTGGCCGCCTaGCAGCGCGTGGCGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: EWPAGKSDFTHVQNAFGQSTVAA*QRVAKR Trigger: GCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCT...TTGACCAAATGCATTTTGCACGTGTGTGAAGTCTGATTTCCCAGCAGGCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS GCA 90 bp | GGCGAGCCACTCGGGGAGGACGAGCTGTCCACGTTAGTCTCACAATaGTCGGAGTATTCCGTCTGGAACTTGTTGAAACCACCTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GEPLGEDELSTLVSQ*SEYSVWNLLKPPWR Trigger: CCTCCAAGGTGGTTTCAACAAGTTCCAGACGGAATACTCCGAGCATTGTGAGACTAACGTGGACAGCTCGTCCTCCCCGAGTGGCTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | CCCAGCACTTCCTGTTCCTCATGGTGCCTAGGGAGAAGCAAGGCTGAGAAGCGAGTGGACTCGAGCGTGTaGATCGGGAACAGGTTATGG | + |
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Preference number: 5 (lower is better) Translates to: PSTSCSSWCLGRSKAEKRVDSSV*IGNRLW Trigger: CCATAACCTGTTCCCGATCAACACGCTCGAGTCCAC...TCGCTTCTCAGCCTTGCTTCTCCCTAGGCACCATGAGGAACAGGAAGTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | AGCAACATGTCTGGAGAGCTGAGGCCATCTGGCAAGTGCTGCCACAGGACCCTGAGGTTGGGTGTGACGTaGAGGATGTATTTGATGCCG | + |
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Preference number: 5 (lower is better) Translates to: SNMSGELRPSGKCCHRTLRLGVT*RMYLMP Trigger: CGGCATCAAATACATCCTCAACGTCACACCCAACCT...CAGGGTCCTGTGGCAGCACTTGCCAGATGGCCTCAGCTCTCCAGACATGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | ACCTCGTTGGAGTCTACAGCAAAGCTAAGGGACTGGGAAGGCTTTACACAGGCATCCTTGTCGGCATGGTaGGGAATGATGGAGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: TSLESTAKLRDWEGFTQASLSAW*GMMERM Trigger: CATCCGCTCCATCATTCCCAACCATGCCGACAAGGA...TGCCTGTGTAAAGCCTTCCCAGTCCCTTAGCTTTGCTGTAGACTCCAACGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | TCTTTAAAAATAGCCAGAATGGCTGGGCTATCAGCCGAATGGATGTCCTGGGGCAAGGCGTTGGGCAGGTaGGGTGTGACGTTGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: SLKIARMAGLSAEWMSWGKALGR*GVTLRM Trigger: CATCCTCAACGTCACACCCAACCTGCCCAACGCCTT...GCCCCAGGACATCCATTCGGCTGATAGCCCAGCCATTCTGGCTATTTTTAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCCAAGCCGCAAGTCTGAAAGCTGAGGCCAACGCTCGCTTAGCAACATGTACGTTGAGGATGTATTaGATGCCGTATTTGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: SPQAASLKAEANARLATCTLRMY*MPYLPS Trigger: ACTTGGCAAATACGGCATCAAATACATCCTCAACGT...ACATGTTGCTAAGCGAGCGTTGGCCTCAGCTTTCAGACTTGCGGCTTGGGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTCTGTCTTAGGAAAGGGGGTGAAATATTGGTTTATACAATCCATTGTATGGGCAGGTTGCCTTaGCGCAGGCGGCGCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: LSLCLRKGGEILVYTIHCMGRLP*RRRRSM Trigger: CATGCTGCGCCGCCTGCGCAAAGGCAACCTGCCCAT...ACAATGGATTGTATAAACCAATATTTCACCCCCTTTCCTAAGACAGAGAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS-3UTR CAA 90 bp | GGGAGGGAGGGAGAGAGAGAGAGAGAAACATGCCATGTACAGAATGGAAGTTTTTATTCCGTCTGGAACTaGTTGAAACCACCTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GREGERERETCHVQNGSFYSVWN*LKPPWR Trigger: CCTCCAAGGTGGTTTCAACAAGTTCCAGACGGAATA...AAAACTTCCATTCTGTACATGGCATGTTTCTCTCTCTCTCTCTCCCTCCCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS GCA 72 bp | GGCCCCCGCTCCCGTCGTCGCTCCCGCTCCGATGCCTaGGCCGGACCCAGATCCCGCACCGGGCTCCGACCC | + |
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Preference number: 6 (lower is better) Translates to: GPRSRRRSRSDA*AGPRSRTGLRP Trigger: GGGTCGGAGCCCGGTGCGGGATCTGGGTCCGGCGCAGGCATCGGAGCGGGAGCGACGACGGGAGCGGGGGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CCA 72 bp | GCTCCTCCTGCAGCCACTCGGCGCTCTTGCAGGGCATaGCCCCCGCTCCCGTCGTCGCTCCCGCTCCGATGC | + |
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Preference number: 6 (lower is better) Translates to: APPAATRRSCRA*PPLPSSLPLRC Trigger: GCATCGGAGCGGGAGCGACGACGGGAGCGGGGGCCATGCCCTGCAAGAGCGCCGAGTGGCTGCAGGAGGAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CCA 72 bp | GCCACTCCGCCGTGGCCTCGTCGTAGAGCAGCACGGTaGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: ATPPWPRRRAAR*PPCSAWRSAPC Trigger: ACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGACGAGGCCACGGCGGAGTGGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS GCA 72 bp | CCGTGGCCTCGTCGTAGAGCAGCACGGTGGCCGCCTTaGAGCGCGTGGCGAAGCGCTCCTTGTCGGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: PWPRRRAARWPP*SAWRSAPCRHG Trigger: ACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGTGCTGCTCTACGACGAGGCCACGG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CAA 90 bp | GTGGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCATGGTaGGGAATGATGGAGCGGATGGGCAGGTTGCCTTTGCGCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: VAALQRVAKRSLSAW*GMMERMGRLPLRRR Trigger: CCGCCTGCGCAAAGGCAACCTGCCCATCCGCTCCATCATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CCA 72 bp | GCTGGCTGGATGGTACAGGGCTGCCATCCGACTCAGTaGCACTGCTGGGCAGCTCTCGGTCCGACTCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: AGWMVQGCHPTQ*HCWAALGPTRR Trigger: ACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACTGAGTCGGATGGCAGCCCTGTACCATCCAGCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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| CDS CAA 72 bp | ACGGTGGCCGCCTTGCAGCGCGTGGCGAAGCGCTCCTaGTCGGCATGGTTGGGAATGATGGAGCGGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: TVAALQRVAKRS*SAWLGMMERMG Trigger: GCCCATCCGCTCCATCATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGCGGCCACCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS GCA 72 bp | TGGATGGTACAGGGCTGCCATCCGACTCAGTGGCACTaGTGGGCAGCTCTCGGTCCGACTCGCCGTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: WMVQGCHPTQWH*WAALGPTRRLS Trigger: GCTCAGACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACTGAGTCGGATGGCAGCCCTGTACCATCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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| CDS CAA 72 bp | TCGGCATGGTTGGGAATGATGGAGCGGATGGGCAGGTaGCCTTTGCGCAGGCGGCGCAGCATGAGACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SAWLGMMERMGR*PLRRRRSMRPG Trigger: CCCGGGTCTCATGCTGCGCCGCCTGCGCAAAGGCAACCTGCCCATCCGCTCCATCATTCCCAACCATGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS TCA 72 bp | GCGTGGCGAAGCGCTCCTTGTCGGCATGGTTGGGAATaGTGGAGCGGATGGGCAGGTTGCCTTTGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AWRSAPCRHGWE*WSGWAGCLCAG Trigger: GCCTGCGCAAAGGCAACCTGCCCATCCGCTCCATCATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CCA 72 bp | GCCTTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCATaGTTGGGAATGATGGAGCGGATGGGCAGGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ALQRVAKRSLSA*LGMMERMGRLP Trigger: AGGCAACCTGCCCATCCGCTCCATCATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CCA 72 bp | ATGGTACAGGGCTGCCATCCGACTCAGTGGCACTGCTaGGCAGCTCTCGGTCCGACTCGCCGTCTGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: MVQGCHPTQWHC*AALGPTRRLSS Trigger: ACTGCTCAGACGGCGAGTCGGACCGAGAGCTGCCCAGCAGTGCCACTGAGTCGGATGGCAGCCCTGTACCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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| CDS CCA 72 bp | GGGCAGGATCTGGACTGGAAAGGCCGGCTGGCTGGATaGTACAGGGCTGCCATCCGACTCAGTGGCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: GQDLDWKGRLAG*YRAAIRLSGTA Trigger: AGCAGTGCCACTGAGTCGGATGGCAGCCCTGTACCATCCAGCCAGCCGGCCTTTCCAGTCCAGATCCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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| CDS CCA 72 bp | GGTAGGGCAGGATCTGGACTGGAAAGGCCGGCTGGCTaGATGGTACAGGGCTGCCATCCGACTCAGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: GRAGSGLERPAG*MVQGCHPTQWH Trigger: GTGCCACTGAGTCGGATGGCAGCCCTGTACCATCCAGCCAGCCGGCCTTTCCAGTCCAGATCCTGCCCTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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| CDS CCA 72 bp | GAAGTAGAGCTGCTCACTGGGTGCGTGGTTGTCGCATaGGCTGCTGAGCCCCAGCGTCCGCTCAAAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: EVELLTGCVVVA*AAEPQRPLKVQ Trigger: CTGGACTTTGAGCGGACGCTGGGGCTCAGCAGCCCATGCGACAACCACGCACCCAGTGAGCAGCTCTACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CAA 72 bp | TTGCAGCGCGTGGCGAAGCGCTCCTTGTCGGCATGGTaGGGAATGATGGAGCGGATGGGCAGGTTGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LQRVAKRSLSAW*GMMERMGRLPL Trigger: CAAAGGCAACCTGCCCATCCGCTCCATCATTCCCAACCATGCCGACAAGGAGCGCTTCGCCACGCGCTGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS TCA 72 bp | TCTCACAATGCTCGGAGTATTCCGTCTGGAACTTGTTaGAACCACCTTGGAGGTAGTAGGCCTGGCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: SHNARSIPSGTC*NHLGGSRPGSR Trigger: ACGGCTGCCAGGCCTACTACCTCCAAGGTGGTTTCAACAAGTTCCAGACGGAATACTCCGAGCATTGTGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS GCA 72 bp | CTCGGGGAGGACGAGCTGTCCACGTTAGTCTCACAATaGTCGGAGTATTCCGTCTGGAACTTGTTGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: LGEDELSTLVSQ*SEYSVWNLLKP Trigger: TGGTTTCAACAAGTTCCAGACGGAATACTCCGAGCATTGTGAGACTAACGTGGACAGCTCGTCCTCCCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172306.3 |
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| CDS CAA 90 bp | AACTCACCACCGTGCTCAAAGGCGTTGGGCAGGTTGGGTGTGACGTaGAGGATGTATTTGATGCCGTATTTGCCAAGTACATCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: NSPPCSKALGRLGVT*RMYLMPYLPSTSRL Trigger: CAACCTGGATGTACTTGGCAAATACGGCATCAAATACATCCTCAACGTCACACCCAACCTGCCCAACGCCTTTGAGCACGGTGGTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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| CDS CAA 72 bp | CCGTGCTCAAAGGCGTTGGGCAGGTTGGGTGTGACGTaGAGGATGTATTTGATGCCGTATTTGCCAAGTACA | + |
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Preference number: 6 (lower is better) Translates to: PCSKALGRLGVT*RMYLMPYLPST Trigger: TGTACTTGGCAAATACGGCATCAAATACATCCTCAACGTCACACCCAACCTGCCCAACGCCTTTGAGCACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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| CDS CAA 72 bp | TTGGGTGTGACGTTGAGGATGTATTTGATGCCGTATTaGCCAAGTACATCCAGGTTGGTAGAGTCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGVTLRMYLMPY*PSTSRLVESLA Trigger: TGCCAAGGACTCTACCAACCTGGATGTACTTGGCAAATACGGCATCAAATACATCCTCAACGTCACACCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172306.3 ENSMUST00000173748.2 |
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