Pregenerated sensors for DUSP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019960Ensembl transcript IDs: ENSMUST00000020118.5, ENSMUST00000220291.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTACCCTCTATCTGGATGGATGTCCAGTCCCTGCTTGGGTAGGCTaGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGT | + |
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Preference number: 1 (lower is better) Translates to: ATLYLDGCPVPAWVG*GTEANLLLDLETAC Trigger: ACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 90 bp | GAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATaGATGTCCAGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: EQMLLSLFLCYPLSG*MSSPCLGRLGYRSK Trigger: TTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 90 bp | TCCCTATTCCTATGCTACCCTCTATCTGGATGGATGTCCAGTCCCTaGTTGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCT | + |
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Preference number: 1 (lower is better) Translates to: SLFLCYPLSGWMSSP*LGRLGYRSKPIAGS Trigger: AGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGCATAGGAATAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 90 bp | TATTCCTATGCTACCCTCTATCTGGATGGATGTCCAGTCCCTGCTTaGGTAGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: YSYATLYLDGCPVPA*VGWGTEANLLLDLE Trigger: CTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGCATAGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 90 bp | ACGAACATCATGGAGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTaGATCCACCAAATGGGCGCTCATACTCGCACACATACACACACT | + |
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Preference number: 1 (lower is better) Translates to: TNIMEQVNSPFLSTC*IHQMGAHTRTHTHT Trigger: AGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCTCCATGATGTTCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 90 bp | TCCAGATGCAACAGGAAACAGCCATACAAGGCCTTAAAGAACAGATaGTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGATGT | + |
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Preference number: 1 (lower is better) Translates to: SRCNRKQPYKALKNR*SCPYSYATLYLDGC Trigger: ACATCCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAGGCCTTGTATGGCTGTTTCCTGTTGCATCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 90 bp | AGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTGCATCCACCAAATaGGCGCTCATACTCGCACACATACACACACTTCCAGTTTCGTAT | + |
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Preference number: 1 (lower is better) Translates to: SKLILPSSQPVASTK*ALILAHIHTLPVSY Trigger: ATACGAAACTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 90 bp | ATGAATGGAGCAAATCTCTCCCTCCGTAATAACCAATTTTGCACTTaGCAACCTTGTCTAACACAGACAGCTGGTGACACTTTTGACACC | + |
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Preference number: 1 (lower is better) Translates to: MNGANLSLRNNQFCT*QPCLTQTAGDTFDT Trigger: GGTGTCAAAAGTGTCACCAGCTGTCTGTGTTAGACAAGGTTGCCAAGTGCAAAATTGGTTATTACGGAGGGAGAGATTTGCTCCATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 90 bp | AAAACAATGAATGGAGCAAATCTCTCCCTCCGTAATAACCAATTTTaGACTTGGCAACCTTGTCTAACACAGACAGCTGGTGACACTTTT | + |
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Preference number: 1 (lower is better) Translates to: KTMNGANLSLRNNQF*TWQPCLTQTAGDTF Trigger: AAAAGTGTCACCAGCTGTCTGTGTTAGACAAGGTTGCCAAGTGCAAAATTGGTTATTACGGAGGGAGAGATTTGCTCCATTCATTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 90 bp | TTGAATCAGTCTTCACTGAAGACAATATATATAGTTAGTTCCAGATaGAACAGGAAACAGCCATACAAGGCCTTAAAGAACAGATGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LNQSSLKTIYIVSSR*NRKQPYKALKNRCS Trigger: GGAGCATCTGTTCTTTAAGGCCTTGTATGGCTGTTTCCTGTTGCATCTGGAACTAACTATATATATTGTCTTCAGTGAAGACTGATTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGGATGTCCAGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAACCTAGAGGAACTGAAGGAATaGGGACAACTCCCGGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LDGCPVPAWVGWGTEANLEELKE*GQLPAR Trigger: CCTAGCCGGGAGTTGTCCCCATTCCTTCAGTTCCTC...TAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CAA 90 bp | CTATTCCTATGCTACCCTCTATCTGGATGGATGTCCAGTCCCTGCTaGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LFLCYPLSGWMSSPC*GRLGYRSKPIAGSR Trigger: TCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGCATAGGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAAAGAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGGAGGAACTGAAGGAATaGGGACAACTCCCGGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LKEQMLLSLFLCYPLSGWEELKE*GQLPAR Trigger: CCTAGCCGGGAGTTGTCCCCATTCCTTCAGTTCCTC...CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAGCATCAAGGTCAAGCATaGTGCAAATATACCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LLHPPNGRSYSHTYTHFQHQGQA*CKYTLW Trigger: CCAAAGGGTATATTTGCAGCATGCTTGACCTTGATG...CTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATAAGCAGCCTGGTCGATaGTGCTCAAGAGGAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDKQPGR*CSRGTE Trigger: TTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTT...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAATCTCTTTGGCTCCACTATACCCAAAGTTGAATCAGTCTTCACTGAAGACTGGATGTCCAGTCCCTaGTTGGGTAGGCTGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: KNLFGSTIPKVESVFTEDWMSSP*LGRLGY Trigger: GTACCCCAGCCTACCCAAGCAGGGACTGGACATCCA...GTCTTCAGTGAAGACTGATTCAACTTTGGGTATAGTGGAGCCAAAGAGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGTTGAATCAGTCTTCTGGATGTCCAGTCCCTaGTTGGGTAGGCTGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: YRAKNLFGSTIPKVESVFWMSSP*LGRLGY Trigger: GTACCCCAGCCTACCCAAGCAGGGACTGGACATCCA...GAAGACTGATTCAACTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR GCA 90 bp | ACCGATACCGCAAATACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGAAGCAGCCTGGTCGATaGTGCTCAAGAGGAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: TDTANTELKISLAPLYPKKQPGR*CSRGTE Trigger: TTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTT...CTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTATTTGCGGTATCGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATCTGTCCCTATTCCTATaGTACCCTCTATCTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDLSLFL*YPLSGW Trigger: CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAG...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAGTTTTGTTCTAAGAAGTaGCATACTGCTCTTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLHPPNGRSYSHTYTHFQFCSKK*HTALSL Trigger: GAGAGAAAGAGCAGTATGCCACTTCTTAGAACAAAA...CTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTCGTAATAACCAATTTTaGACTTGGCAACCTTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: RLGYRSKPIAGSRDSMSCRNNQF*TWQPCL Trigger: TAGACAAGGTTGCCAAGTGCAAAATTGGTTATTACG...ACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CAA 90 bp | AACAAAGTCTTAGTGATAATAATATCCACGAAAATGCCGTCAGAATaGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: NKVLVIIISTKMPSE*VHQGQACCKYTLWI Trigger: AATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGCATTTTCGTGGATATTATTATCACTAAGACTTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CAA 90 bp | GCAAATACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGTaGAATCAGTCTTCACTGAAGACAATATATATAGTTAGTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ANTELKISLAPLYPK*NQSSLKTIYIVSSR Trigger: TCTGGAACTAACTATATATATTGTCTTCAGTGAAGACTGATTCAACTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTATTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 72 bp | AGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATaGGGACAACTCCCGGCTAGGAGAGGTGGGTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: SLVDAAQEELKE*GQLPARRGGCL Trigger: AAGGCACCCACCTCTCCTAGCCGGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR TCA 72 bp | AAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTaGAGGAATGGGGACAACTCCCGGCTAGGAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: KKAAWSMLLKRN*RNGDNSRLGEV Trigger: CACCTCTCCTAGCCGGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 72 bp | GGGCCACACACAGAAAGAAAGCAGCCTGGTCGATGCTaGTCAAGAGGAACTGAAGGAATGGGGACAACTCCC | + |
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Preference number: 3 (lower is better) Translates to: GPHTERKQPGRC*SRGTEGMGTTP Trigger: GGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTGTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 72 bp | CCGGGGCCACACACAGAAAGAAAGCAGCCTGGTCGATaGTGCTCAAGAGGAACTGAAGGAATGGGGACAACT | + |
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Preference number: 3 (lower is better) Translates to: PGPHTERKQPGR*CSRGTEGMGTT Trigger: AGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTGTGGCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 72 bp | CTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATaGATGTCCAGTCCCTGCTTGGGTAGGCTGGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: LLSLFLCYPLSG*MSSPCLGRLGY Trigger: GTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGATGGATGTCCAGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCACTTGGCAACCTaGTCTAACACAGACAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LDGCPVPAWVGWGTEANLLHLAT*SNTDSW Trigger: CCAGCTGTCTGTGTTAGACAAGGTTGCCAAGTGCAA...TAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | CTTAAAGAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGCAGCTGGTGACACTTTaGACACCCGGGGCCACACAC | + |
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Preference number: 3 (lower is better) Translates to: LKEQMLLSLFLCYPLSGWQLVTL*TPGATH Trigger: GTGTGTGGCCCCGGGTGTCAAAAGTGTCACCAGCTG...CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAGTTGCACTTGGCAACCTaGTCTAACACAGACAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LLHPPNGRSYSHTYTHFQLHLAT*SNTDSW Trigger: CCAGCTGTCTGTGTTAGACAAGGTTGCCAAGTGCAA...CTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 72 bp | CTATGCTACCCTCTATCTGGATGGATGTCCAGTCCCTaGTTGGGTAGGCTGGGGTACAGAAGCAAACCTATT | + |
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Preference number: 3 (lower is better) Translates to: LCYPLSGWMSSP*LGRLGYRSKPI Trigger: AATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 72 bp | GGCCTTAAAGAACAGATGCTCCTGTCCCTATTCCTATaGTACCCTCTATCTGGATGGATGTCCAGTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: GLKEQMLLSLFL*YPLSGWMSSPC Trigger: GCAGGGACTGGACATCCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 72 bp | TATCTGGATGGATGTCCAGTCCCTGCTTGGGTAGGCTaGGGTACAGAAGCAAACCTATTGCTGGATCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: YLDGCPVPAWVG*GTEANLLLDLE Trigger: CTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | ACCGATACCGCAAATACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGCAGCTGGTGACACTTTaGACACCCGGGGCCACACAC | + |
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Preference number: 3 (lower is better) Translates to: TDTANTELKISLAPLYPKQLVTL*TPGATH Trigger: GTGTGTGGCCCCGGGTGTCAAAAGTGTCACCAGCTG...CTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTATTTGCGGTATCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 72 bp | ATTCTCCCTTCCTCTCAACCTGTTGCATCCACCAAATaGGCGCTCATACTCGCACACATACACACACTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ILPSSQPVASTK*ALILAHIHTLP Trigger: TGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 72 bp | ATGGAGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTaGATCCACCAAATGGGCGCTCATACTCGCACACAT | + |
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Preference number: 3 (lower is better) Translates to: MEQVNSPFLSTC*IHQMGAHTRTH Trigger: ATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | TCAACCTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTCCACTATACCCAAAGTaGAATCAGTCTTCACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: STCCIHQMGAHTRTHTHTPLYPK*NQSSLK Trigger: CTTCAGTGAAGACTGATTCAACTTTGGGTATAGTGG...AGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCATTTCCAAAATACCCCTaGAGACACTGTAAGCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: PVASTKWALILAHIHTLPFPKYP*RHCKPN Trigger: ATTTGGCTTACAGTGTCTCAAGGGGTATTTTGGAAA...TGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 72 bp | AACAGGAAACAGCCATACAAGGCCTTAAAGAACAGATaGTCCTGTCCCTATTCCTATGCTACCCTCTATCTG | + |
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Preference number: 3 (lower is better) Translates to: NRKQPYKALKNR*SCPYSYATLYL Trigger: CAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAGGCCTTGTATGGCTGTTTCCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR CCA 72 bp | GCAAATCTCTCCCTCCGTAATAACCAATTTTGCACTTaGCAACCTTGTCTAACACAGACAGCTGGTGACACT | + |
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Preference number: 3 (lower is better) Translates to: ANLSLRNNQFCT*QPCLTQTAGDT Trigger: AGTGTCACCAGCTGTCTGTGTTAGACAAGGTTGCCAAGTGCAAAATTGGTTATTACGGAGGGAGAGATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATACAGAAGCAAACCTATaGCTGGATCTAGAGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDTEANL*LDLETA Trigger: TGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGT...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR GCA 72 bp | AATGGAGCAAATCTCTCCCTCCGTAATAACCAATTTTaGACTTGGCAACCTTGTCTAACACAGACAGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: NGANLSLRNNQF*TWQPCLTQTAG Trigger: ACCAGCTGTCTGTGTTAGACAAGGTTGCCAAGTGCAAAATTGGTTATTACGGAGGGAGAGATTTGCTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| 3UTR-3UTR CAA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATCCACTATACCCAAAGTaGAATCAGTCTTCACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDPLYPK*NQSSLK Trigger: CTTCAGTGAAGACTGATTCAACTTTGGGTATAGTGG...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGGGGACAACTCCCGGCAGACGCCGCAGCATaGTGCCGGGGATGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SSLVDAAQEELKEWGQLPADAAA*CRGWPH Trigger: ATGTGGCCATCCCCGGCATCATGCTGCGGCGTCTGC...CGGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGGGGACAACTCCCGCCCGAGCCCCAGCACTaGCAAAGGCGGGGAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVDAAQEELKEWGQLPPEPQH*QRRGTA Trigger: AGCAGTTCCCCGCCTTTGCCAGTGCTGGGGCTCGGG...CGGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGGGGACAACTCCCGGGCAGGTTGCCCTTCTaGAGACGCCGCAGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVDAAQEELKEWGQLPGRLPF*RRRSMM Trigger: CATCATGCTGCGGCGTCTGCAGAAGGGCAACCTGCC...CGGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGGGGACAACTCCCGAGGAAGGCTGGCTGTTaGACAGCGGGCTGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLVDAAQEELKEWGQLPRKAGC*TAGCHQ Trigger: CTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCT...CGGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTCGCAGACGCCGCAGCATaGTGCCGGGGATGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GWGTEANLLLDLETACPVADAAA*CRGWPH Trigger: ATGTGGCCATCCCCGGCATCATGCTGCGGCGTCTGC...GACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTAGGAAGAGTCCGAGCTaGTCCGCAGGCCCCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGYRSKPIAGSRDSMSCRKSPS*SAGPRA Trigger: GGCTCGGGGGCCTGCGGATCAGCTCGGACTCTTCCT...ACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGGGGACAACTCCCGGGTTGTCACAAGGGCTaGTCAGTCCCAGGGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVDAAQEELKEWGQLPGCHKG*SVPGSF Trigger: AAAGGACCCTGGGACTGAGCAGCCCTTGTGACAACC...CGGGAGTTGTCCCCATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTGCATCCACCAAATGGGCGCTCGCTCCAGCTGCTCGTTaGGCCACGACACCGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLILPSSQPVASTKWALAPAAR*ATTPSC Trigger: GCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGC...GAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTGCTCCAGCTGCTCGTTaGGCCACGACACCGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGYRSKPIAGSRDSMSCAPAAR*ATTPSC Trigger: GCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGC...ACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCATTGCCCAGCTCCAGCTaGTCGTTGAGCCACGACACC | + |
|
Preference number: 4 (lower is better) Translates to: PVASTKWALILAHIHTLPLPSSS*SLSHDT Trigger: GGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAA...TGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAGGCGGGGAACTGCTGCTaGACGAGCCGTCTAGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHPPNGRSYSHTYTHFQAGNCC*TSRLDW Trigger: CCAATCTAGACGGCTCGTGCAGCAGCAGTTCCCCGC...CTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | GGGCCACACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAAAGGCGGGGAACTGCTaGTGCACGAGCCGTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPHTERKQPGRCCSRGTEKAGNC*CTSRLD Trigger: ATCTAGACGGCTCGTGCAGCAGCAGTTCCCCGCCTT...TTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTGTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTGCATCCACCAAATGGGCGCTCACCGGGAAGGAAGGCTaGCTGTTGGACAGCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKLILPSSQPVASTKWALTGKEG*LLDSGL Trigger: CAGCCCGCTGTCCAACAGCCAGCCTTCCTTCCCGGT...GAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | CTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAGGCCACGACACCGTCTTaGAGATCGCCATTTCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: LLHPPNGRSYSHTYTHFQATTPS*RSPFPT Trigger: CGTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGC...CTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTTTGCCCAGCTCCAGCTaGTCGTTGAGCCACGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RLGYRSKPIAGSRDSMSCLPSSS*SLSHDT Trigger: GGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAA...ACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | TCAACCTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTAGATTGGTCTCGCAGTaGAGGGCGAACTCGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STCCIHQMGAHTRTHTHTRLVSQ*RANSAW Trigger: CCAGGCCGAGTTCGCCCTGCACTGCGAGACCAATCT...AGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTGCATCCACCAAATGGGCGCTCGCAAAGGCGGGGAACTaGTGCTGCACGAGCCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SKLILPSSQPVASTKWALAKAGN*CCTSRL Trigger: TAGACGGCTCGTGCAGCAGCAGTTCCCCGCCTTTGC...GAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | GGGCCACACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGCCATCAGAGTCCGTTaGACTATTGGGGTCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPHTERKQPGRCCSRGTEAIRVR*TIGVSV Trigger: GACCGAGACCCCAATAGTGCAACGGACTCTGATGGC...TTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTGTGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTGCCACGACACCGTCTTaGAGATCGCCATTTCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: RLGYRSKPIAGSRDSMSCATTPS*RSPFPT Trigger: CGTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGC...ACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAAGAGCGGCTGATACCTaGCAAGCAATGCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVASTKWALILAHIHTLPRAADT*QAMHQD Trigger: GTCCTGGTGCATTGCTTGGCAGGTATCAGCCGCTCT...TGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTCGGTTGTCACAAGGGCTaGTCAGTCCCAGGGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GWGTEANLLLDLETACPVGCHKG*SVPGSF Trigger: AAAGGACCCTGGGACTGAGCAGCCCTTGTGACAACC...GACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATGGATGTCCAGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAACCTAGGACACCACAGTTTTTaGCTCGGGCTTCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDGCPVPAWVGWGTEANLGHHSF*LGLHLP Trigger: TGGAAGATGAAGCCCGAGGCAAAAACTGTGGTGTCC...TAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220291.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTCTCGTACAGCTCCTGTaGTCGGCAGTCCATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGYRSKPIAGSRDSMSCLVQLL*SAVHQQ Trigger: CTGCTGATGGACTGCCGACCACAGGAGCTGTACGAG...ACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAAGGGCGAACTCGGCCTaGAACTTACTGAAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SPCLGRLGYRSKPIAGSRRANSA*NLLKPP Trigger: AGGTGGCTTCAGTAAGTTCCAGGCCGAGTTCGCCCT...TCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAGAGTACAGCTGCGGAGTaGGGACACGGTTGTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHPPNGRSYSHTYTHFQSTAAE*GHGCHK Trigger: CTTGTGACAACCGTGTCCCCACTCCGCAGCTGTACT...CTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAAGTACAGCTGCGGAGTaGGGACACGGTTGTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVASTKWALILAHIHTLPSTAAE*GHGCHK Trigger: CTTGTGACAACCGTGTCCCCACTCCGCAGCTGTACT...TGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| 3UTR CAA 72 bp | TGCTACCCTCTATCTGGATGGATGTCCAGTCCCTGCTaGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CYPLSGWMSSPC*GRLGYRSKPIA Trigger: AGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACTGGACATCCATCCAGATAGAGGGTAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTGCATCCACCAAATGGGCGCTCAGAGCGGCTGATACCTaGCAAGCAATGCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SKLILPSSQPVASTKWALRAADT*QAMHQD Trigger: GTCCTGGTGCATTGCTTGGCAGGTATCAGCCGCTCT...GAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAAGTTGGTCGAGTCCTTaGCACAGCCCAGGTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVASTKWALILAHIHTLPSWSSP*HSPGKG Trigger: TCCTTTACCTGGGCTGTGCCAAGGACTCGACCAACT...TGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | GGGCCACACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAATCTCATTCCAGTCGCTaGTATTCTCGTCGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPHTERKQPGRCCSRGTESHSSR*YSRRTA Trigger: TGCTGTACGACGAGAATAGCAGCGACTGGAATGAGA...TTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTGTGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR GCA 90 bp | CTTAAAGAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGTGTTGGACAGCGGGCTaGCATCAGAGTCCGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKEQMLLSLFLCYPLSGWCWTAG*HQSPLH Trigger: GTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACA...CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR CCA 90 bp | ATCATGGAGCAAGTTAATTCTCCCTTCCTCTCAACCTGTTGCATCCACCAAATGCTCGTACAGCTCCTGTaGTCGGCAGTCCATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IMEQVNSPFLSTCCIHQMLVQLL*SAVHQQ Trigger: CTGCTGATGGACTGCCGACCACAGGAGCTGTACGAG...CATTTGGTGGATGCAACAGGTTGAGAGGAAGGGAGAATTAACTTGCTCCATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGAACGAGCCGTCTAGATTaGTCTCGCAGTGCAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CRQNWYIKVKHAANIPFGTSRLD*SRSAGR Trigger: TCGCCCTGCACTGCGAGACCAATCTAGACGGCTCGT...TCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR TCA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATCGGCCTGGAACTTACTaGAGCCACCTTCCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDRPGTY*SHLPGR Trigger: TCTACCTGGAAGGTGGCTTCAGTAAGTTCCAGGCCG...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | CACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGTCTCATTCCAGTCGCTaGTATTCTCGTCGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTERKQPGRCCSRGTEGMSHSSR*YSRRTA Trigger: TGCTGTACGACGAGAATAGCAGCGACTGGAATGAGA...CATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CCA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATAGTCCGTTGCACTATTaGGGTCTCGGTCAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDSPLHY*GLGQGQ Trigger: CTGACCTTGACCGAGACCCCAATAGTGCAACGGACT...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTGAATTTGCTTGTATTTaGACTCGCCCGCATTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLGYRSKPIAGSRDSMSCEFACI*TRPHSQ Trigger: TTGAGAATGCGGGCGAGTTCAAATACAAGCAAATTC...ACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR TCA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATCTCGGGCTTCATCTATaGAAGAAATGGCCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDLGLHL*KKWPQG Trigger: TCCCTGAGGCCATTTCTTTCATAGATGAAGCCCGAG...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR GCA 90 bp | ACCGATACCGCAAATACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGTCCGAGATAGGAATTTaGTTGTATTTGAACTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TDTANTELKISLAPLYPKSEIGI*LYLNSP Trigger: GGGCGAGTTCAAATACAAGCAAATTCCTATCTCGGA...CTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTATTTGCGGTATCGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| 3UTR CAA 72 bp | TTAGTGATAATAATATCCACGAAAATGCCGTCAGAATaGGTACATCAAGGTCAAGCATGCTGCAAATATACC | + |
|
Preference number: 4 (lower is better) Translates to: LVIIISTKMPSE*VHQGQACCKYT Trigger: GGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGCATTTTCGTGGATATTATTATCACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS GCA 90 bp | GCAGCCCGAGGACCGACTCTCCACCAGTGTTCTCATTCCAGTCGCTaGTATTCTCGTCGTACAGCACCACGGTGTCGGTGCCGCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AARGPTLHQCSHSSR*YSRRTAPRCRCRSA Trigger: GGCGCTGCGGCACCGACACCGTGGTGCTGTACGACGAGAATAGCAGCGACTGGAATGAGAACACTGGTGGAGAGTCGGTCCTCGGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS GCA 90 bp | GGTCGGCAGTCCATCAGCAGAAGCCGTTCGTTGCCCAGCTCCAGCTaGTCGTTGAGCCACGACACCGTCTTGCAGATCGCCATTTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRQSISRSRSLPSSS*SLSHDTVLQIAISD Trigger: GTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGCTGATGGACTGCCGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS TCA 90 bp | AGTCCATCAGCAGAAGCCGTTCGTTGCCCAGCTCCAGCTGCTCGTTaGGCCACGACACCGTCTTGCAGATCGCCATTTCCGACGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSAEAVRCPAPAAR*ATTPSCRSPFPTRR Trigger: CCTTCGCGTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGCTGATGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGCACGCACGGGCAGGTaGCCCTTCTGCAGACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPCLGRLGYRSKPIAGSRARTGR*PFCRRR Trigger: GCGGCGTCTGCAGAAGGGCAACCTGCCCGTGCGTGC...TCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS GCA 90 bp | GCAAAATCTCCACCGGGAAGGAAGGCTGGCTGTTGGACAGCGGGCTaGCATCAGAGTCCGTTGCACTATTGGGGTCTCGGTCAAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AKSPPGRKAGCWTAG*HQSPLHYWGLGQGQ Trigger: CTGACCTTGACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTTCCCGGTGGAGATTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS CCA 90 bp | GCTGGCTGTTGGACAGCGGGCTGCCATCAGAGTCCGTTGCACTATTaGGGTCTCGGTCAAGGTCAGACTCAATGTCCGAGGAAGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGCWTAGCHQSPLHY*GLGQGQTQCPRKSP Trigger: CGGACTCTTCCTCGGACATTGAGTCTGACCTTGACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS GCA 90 bp | GAAGGAAGGCTGGCTGTTGGACAGCGGGCTGCCATCAGAGTCCGTTaGACTATTGGGGTCTCGGTCAAGGTCAGACTCAATGTCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGRLAVGQRAAIRVR*TIGVSVKVRLNVRG Trigger: TCCTCGGACATTGAGTCTGACCTTGACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS CCA 90 bp | GGTAAAGGAAGGGCAAAATCTCCACCGGGAAGGAAGGCTGGCTGTTaGACAGCGGGCTGCCATCAGAGTCCGTTGCACTATTGGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKGRAKSPPGRKAGC*TAGCHQSPLHYWGL Trigger: GAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTTCCCGGTGGAGATTTTGCCCTTCCTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS-3UTR CAA 90 bp | CTGTTGCATCCACCAAATGGGCGCTCATACTCGCACACATACACACACTTCCAGAGCAGAAGCCGTTCGTaGCCCAGCTCCAGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLHPPNGRSYSHTYTHFQSRSRS*PSSSCS Trigger: CGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGCT...CTGGAAGTGTGTGTATGTGTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS TCA 90 bp | CAGCATGATGCCGGGGATGGCCACATTAATGGCAGATTCGATGTGTaGCGACTCGTACAGCTCCTGTGGTCGGCAGTCCATCAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QHDAGDGHINGRFDV*RLVQLLWSAVHQQK Trigger: CTTCTGCTGATGGACTGCCGACCACAGGAGCTGTACGAGTCGTCACACATCGAATCTGCCATTAATGTGGCCATCCCCGGCATCATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | AGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAAGCTCCAGCTGCTCGTaGAGCCACGACACCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPCLGRLGYRSKPIAGSRSSSCS*SHDTVL Trigger: CAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCT...TCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | TGGCAACCTTGTCTAACACAGACAGCTGGTGACACTTTTGACACCCGGGGCCACTCGTCTTTGAGTTTCTaGAGCAGCAGCCCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: WQPCLTQTAGDTFDTRGHSSLSF*SSSPRT Trigger: GGTCCTCGGGCTGCTGCTCAAGAAACTCAAAGACGA...GTGGCCCCGGGTGTCAAAAGTGTCACCAGCTGTCTGTGTTAGACAAGGTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | AGTCCCTGCTTGGGTAGGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAAGCCACGACACCGTCTaGCAGATCGCCATTTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPCLGRLGYRSKPIAGSRSHDTV*QIAISD Trigger: GTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCT...TCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCCTACCCAAGCAGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | CACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGCGGCAGCCCTCGTCTTaGAGTTTCTTGAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTERKQPGRCCSRGTEGMRQPSS*SFLSSS Trigger: GCTGCTGCTCAAGAAACTCAAAGACGAGGGCTGCCG...CATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATCTCTTTGGCTCCACTATACCCAAAGTTGAATCAGTCTTCACTGAAGACGCACGCACGGGCAGGTaGCCCTTCTGCAGACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KNLFGSTIPKVESVFTEDARTGR*PFCRRR Trigger: GCGGCGTCTGCAGAAGGGCAACCTGCCCGTGCGTGC...GTCTTCAGTGAAGACTGATTCAACTTTGGGTATAGTGGAGCCAAAGAGATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGACACGAGCCGTCTAGATaGGTCTCGCAGTGCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CRQNWYIKVKHAANIPFGHEPSR*VSQCRA Trigger: CGCCCTGCACTGCGAGACCAATCTAGACGGCTCGTG...TCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR CAA 90 bp | CTTAAAGAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGCGGCAGCCCTCGTCTTaGAGTTTCTTGAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LKEQMLLSLFLCYPLSGWRQPSS*SFLSSS Trigger: GCTGCTGCTCAAGAAACTCAAAGACGAGGGCTGCCG...CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGAAAGGAAGGCTGGCTGTaGGACAGCGGGCTGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CRQNWYIKVKHAANIPFGKEGWL*DSGLPS Trigger: TGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTT...TCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS-3UTR CAA 90 bp | GGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTCAGGACACCACAGTTTTaGCCTCGGGCTTCATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: GWGTEANLLLDLETACPVRTPQF*PRASSM Trigger: CATAGATGAAGCCCGAGGCAAAAACTGTGGTGTCCT...GACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR CAA 90 bp | CTTAAAGAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGGAGTCCGTTGCACTATaGGGGTCTCGGTCAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKEQMLLSLFLCYPLSGWESVAL*GSRSRS Trigger: TGACCTTGACCGAGACCCCAATAGTGCAACGGACTC...CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS-3UTR CAA 90 bp | GCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGATTGCCATCAGAGTCCGTaGCACTATTGGGGTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVRIGTSRSSMLQIYPLDCHQSP*HYWGLG Trigger: ACCGAGACCCCAATAGTGCAACGGACTCTGATGGCA...ATCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS-3UTR CAA 90 bp | GGGCCACACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAATCCGAGATAGGAATTaGCTTGTATTTGAACTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPHTERKQPGRCCSRGTEIRDRN*LVFELA Trigger: GGCGAGTTCAAATACAAGCAAATTCCTATCTCGGAT...TTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTGTGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS-3UTR CAA 90 bp | CTTAAAGAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGAGGACACCACAGTTTTaGCCTCGGGCTTCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKEQMLLSLFLCYPLSGWRTPQF*PRASSS Trigger: GGAAGATGAAGCCCGAGGCAAAAACTGTGGTGTCCT...CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | TACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGTTGAATCAGTCTTCAGCTCCAGCTGCTCGTaGAGCCACGACACCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRAKNLFGSTIPKVESVFSSSCS*SHDTVL Trigger: CAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCT...GAAGACTGATTCAACTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | ACCGATACCGCAAATACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGTCGTCTTTGAGTTTCTaGAGCAGCAGCCCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TDTANTELKISLAPLYPKSSLSF*SSSPRT Trigger: GGTCCTCGGGCTGCTGCTCAAGAAACTCAAAGACGA...CTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTATTTGCGGTATCGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS-3UTR CAA 90 bp | CACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGGGAATTTGCTTGTATTaGAACTCGCCCGCATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTERKQPGRCCSRGTEGMGICLY*NSPAFS Trigger: TGAGAATGCGGGCGAGTTCAAATACAAGCAAATTCC...CATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS-3UTR CAA 90 bp | GGCTGGGGTACAGAAGCAAACCTATTGCTGGATCTAGAGACAGCATGTCCTGTCAAGTTGGGGGAGATGTaGGACTTCTTCATCTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: GWGTEANLLLDLETACPVKLGEM*DFFILT Trigger: TGTTAAGATGAAGAAGTCCAACATCTCCCCCAACTT...GACAGGACATGCTGTCTCTAGATCCAGCAATAGGTTTGCTTCTGTACCCCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | TACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGTTGAATCAGTCTTCAGCCACGACACCGTCTaGCAGATCGCCATTTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: YRAKNLFGSTIPKVESVFSHDTV*QIAISD Trigger: GTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCT...GAAGACTGATTCAACTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | CACACAGAAAGAAAGCAGCCTGGTCGATGCTGCTCAAGAGGAACTGAAGGAATGAAGTTGGGGGAGATGTaGGACTTCTTCATCTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: HTERKQPGRCCSRGTEGMKLGEM*DFFILT Trigger: TGTTAAGATGAAGAAGTCCAACATCTCCCCCAACTT...CATTCCTTCAGTTCCTCTTGAGCAGCATCGACCAGGCTGCTTTCTTTCTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS-3UTR CAA 90 bp | TGCCGTCAGAATTGGTACATCAAGGTCAAGCATGCTGCAAATATACCCTTTGGAGCATTCTCAAACAGATaGGGCAAATTGGGGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CRQNWYIKVKHAANIPFGAFSNR*GKLGVT Trigger: TGTCACCCCCAATTTGCCCAATCTGTTTGAGAATGC...TCCAAAGGGTATATTTGCAGCATGCTTGACCTTGATGTACCAATTCTGACGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS-3UTR CAA 90 bp | CTTAAAGAACAGATGCTCCTGTCCCTATTCCTATGCTACCCTCTATCTGGATGGACATTCAAGATGTACTaGATGCCAAACTCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LKEQMLLSLFLCYPLSGWTFKMY*MPNSSN Trigger: GTTGGAAGAGTTTGGCATCAAGTACATCTTGAATGT...CCATCCAGATAGAGGGTAGCATAGGAATAGGGACAGGAGCATCTGTTCTTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS-3UTR CAA 90 bp | TACAGAGCTAAAAATCTCTTTGGCTCCACTATACCCAAAGTTGAATCAGTCTTCAAACTGGGACAGGTTTaGGCTCCAGTGATCCGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YRAKNLFGSTIPKVESVFKLGQV*APVIRD Trigger: ATCTCGGATCACTGGAGCCAAAACCTGTCCCAGTTT...GAAGACTGATTCAACTTTGGGTATAGTGGAGCCAAAGAGATTTTTAGCTCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS CAA 90 bp | CGGTCCCGGTCCTCGCAGCGCGTGAAGAGCGCACGCACGGGCAGGTaGCCCTTCTGCAGACGCCGCAGCATGATGCCGGGGATGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSRSSQRVKSARTGR*PFCRRRSMMPGMAT Trigger: TGTGGCCATCCCCGGCATCATGCTGCGGCGTCTGCAGAAGGGCAACCTGCCCGTGCGTGCGCTCTTCACGCGCTGCGAGGACCGGGACCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS CAA 72 bp | TCCTCGCAGCGCGTGAAGAGCGCACGCACGGGCAGGTaGCCCTTCTGCAGACGCCGCAGCATGATGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSQRVKSARTGR*PFCRRRSMMPG Trigger: CCCCGGCATCATGCTGCGGCGTCTGCAGAAGGGCAACCTGCCCGTGCGTGCGCTCTTCACGCGCTGCGAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS CAA 72 bp | CCCAGCTCCAGCTGCTCGTTGAGCCACGACACCGTCTaGCAGATCGCCATTTCCGACGCGAAGGGCACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSSSCSLSHDTV*QIAISDAKGTG Trigger: ACCCGTGCCCTTCGCGTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS CAA 90 bp | CGTTCGTTGCCCAGCTCCAGCTGCTCGTTGAGCCACGACACCGTCTaGCAGATCGCCATTTCCGACGCGAAGGGCACGGGTCTGAGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSLPSSSCSLSHDTV*QIAISDAKGTGLSV Trigger: TACGCTCAGACCCGTGCCCTTCGCGTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAACGAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS GCA 72 bp | CCACCGGGAAGGAAGGCTGGCTGTTGGACAGCGGGCTaGCATCAGAGTCCGTTGCACTATTGGGGTCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PPGRKAGCWTAG*HQSPLHYWGLG Trigger: ACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTTCCCGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS CCA 72 bp | AAGGCGGGGAACTGCTGCTGCACGAGCCGTCTAGATTaGTCTCGCAGTGCAGGGCGAACTCGGCCTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: KAGNCCCTSRLD*SRSAGRTRPGT Trigger: AGTTCCAGGCCGAGTTCGCCCTGCACTGCGAGACCAATCTAGACGGCTCGTGCAGCAGCAGTTCCCCGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS CAA 72 bp | TCCTGTGGTCGGCAGTCCATCAGCAGAAGCCGTTCGTaGCCCAGCTCCAGCTGCTCGTTGAGCCACGACACC | + |
|
Preference number: 6 (lower is better) Translates to: SCGRQSISRSRS*PSSSCSLSHDT Trigger: GGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGCTGATGGACTGCCGACCACAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
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| CDS CAA 72 bp | AAAGGCGGGGAACTGCTGCTGCACGAGCCGTCTAGATaGGTCTCGCAGTGCAGGGCGAACTCGGCCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KGGELLLHEPSR*VSQCRANSAWN Trigger: GTTCCAGGCCGAGTTCGCCCTGCACTGCGAGACCAATCTAGACGGCTCGTGCAGCAGCAGTTCCCCGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS CAA 90 bp | TCGTACAGCTCCTGTGGTCGGCAGTCCATCAGCAGAAGCCGTTCGTaGCCCAGCTCCAGCTGCTCGTTGAGCCACGACACCGTCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SYSSCGRQSISRSRS*PSSSCSLSHDTVLQ Trigger: CTGCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGCTGATGGACTGCCGACCACAGGAGCTGTACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS TCA 72 bp | GCAGAAGCCGTTCGTTGCCCAGCTCCAGCTGCTCGTTaGGCCACGACACCGTCTTGCAGATCGCCATTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AEAVRCPAPAAR*ATTPSCRSPFP Trigger: CGGAAATGGCGATCTGCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS CAA 90 bp | CAGTCCATCAGCAGAAGCCGTTCGTTGCCCAGCTCCAGCTGCTCGTaGAGCCACGACACCGTCTTGCAGATCGCCATTTCCGACGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QSISRSRSLPSSSCS*SHDTVLQIAISDAK Trigger: CTTCGCGTCGGAAATGGCGATCTGCAAGACGGTGTCGTGGCTCAACGAGCAGCTGGAGCTGGGCAACGAACGGCTTCTGCTGATGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS CAA 90 bp | AGCACTGGCAAAGGCGGGGAACTGCTGCTGCACGAGCCGTCTAGATaGGTCTCGCAGTGCAGGGCGAACTCGGCCTGGAACTTACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STGKGGELLLHEPSR*VSQCRANSAWNLLK Trigger: CTTCAGTAAGTTCCAGGCCGAGTTCGCCCTGCACTGCGAGACCAATCTAGACGGCTCGTGCAGCAGCAGTTCCCCGCCTTTGCCAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS CAA 90 bp | GGAAGGAAGGCTGGCTGTTGGACAGCGGGCTGCCATCAGAGTCCGTaGCACTATTGGGGTCTCGGTCAAGGTCAGACTCAATGTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRKAGCWTAGCHQSP*HYWGLGQGQTQCPR Trigger: CCTCGGACATTGAGTCTGACCTTGACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS GCA 72 bp | GGACCGACTCTCCACCAGTGTTCTCATTCCAGTCGCTaGTATTCTCGTCGTACAGCACCACGGTGTCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPTLHQCSHSSR*YSRRTAPRCRC Trigger: GCACCGACACCGTGGTGCTGTACGACGAGAATAGCAGCGACTGGAATGAGAACACTGGTGGAGAGTCGGTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS CCA 72 bp | TGGACAGCGGGCTGCCATCAGAGTCCGTTGCACTATTaGGGTCTCGGTCAAGGTCAGACTCAATGTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WTAGCHQSPLHY*GLGQGQTQCPR Trigger: CCTCGGACATTGAGTCTGACCTTGACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS CCA 72 bp | AGGGCAAAATCTCCACCGGGAAGGAAGGCTGGCTGTTaGACAGCGGGCTGCCATCAGAGTCCGTTGCACTAT | + |
|
Preference number: 6 (lower is better) Translates to: RAKSPPGRKAGC*TAGCHQSPLHY Trigger: ATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAGCCTTCCTTCCCGGTGGAGATTTTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS TCA 72 bp | GCCGGGGATGGCCACATTAATGGCAGATTCGATGTGTaGCGACTCGTACAGCTCCTGTGGTCGGCAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AGDGHINGRFDV*RLVQLLWSAVH Trigger: ATGGACTGCCGACCACAGGAGCTGTACGAGTCGTCACACATCGAATCTGCCATTAATGTGGCCATCCCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020118.5 ENSMUST00000220291.2 |
||
| CDS GCA 72 bp | CTGGCTGTTGGACAGCGGGCTGCCATCAGAGTCCGTTaGACTATTGGGGTCTCGGTCAAGGTCAGACTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LAVGQRAAIRVR*TIGVSVKVRLN Trigger: ATTGAGTCTGACCTTGACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCCGCTGTCCAACAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS CCA 72 bp | CAAACTCTTCCAACACGTCCAAGTTGGTCGAGTCCTTaGCACAGCCCAGGTAAAGGAAGGGCAAAATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QTLPTRPSWSSP*HSPGKGRAKSP Trigger: TGGAGATTTTGCCCTTCCTTTACCTGGGCTGTGCCAAGGACTCGACCAACTTGGACGTGTTGGAAGAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
||
| CDS CAA 90 bp | TTCTCAAACAGATTGGGCAAATTGGGGGTGACATTCAAGATGTACTaGATGCCAAACTCTTCCAACACGTCCAAGTTGGTCGAGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FSNRLGKLGVTFKMY*MPNSSNTSKLVESL Trigger: CAAGGACTCGACCAACTTGGACGTGTTGGAAGAGTTTGGCATCAAGTACATCTTGAATGTCACCCCCAATTTGCCCAATCTGTTTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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| CDS CAA 72 bp | TGCTTGTATTTGAACTCGCCCGCATTCTCAAACAGATaGGGCAAATTGGGGGTGACATTCAAGATGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: CLYLNSPAFSNR*GKLGVTFKMYL Trigger: CAAGTACATCTTGAATGTCACCCCCAATTTGCCCAATCTGTTTGAGAATGCGGGCGAGTTCAAATACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020118.5 |
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