Pregenerated sensors for DUSP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034765Ensembl transcript IDs: ENSMUST00000038287.7
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGGAAGTACAGCAGTCAGCACGTACTGTGCTTGGGGCATGGCTTaGCCTTCCATACAGTCCCGAGAGCCCATCCTTGGGGATGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: SGSTAVSTYCAWGMA*PSIQSREPILGDGL Trigger: CAGACCATCCCCAAGGATGGGCTCTCGGGACTGTATGGAAGGCCAAGCCATGCCCCAAGCACAGTACGTGCTGACTGCTGTACTTCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CCA 90 bp | TTGGGGCATGGCTTGGCCTTCCATACAGTCCCGAGAGCCCATCCTTaGGGATGGTCTGAAGTGCATCTGCAAGCCTTGCTGACCACTCAG | + |
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Preference number: 1 (lower is better) Translates to: LGHGLAFHTVPRAHP*GWSEVHLQALLTTQ Trigger: CTGAGTGGTCAGCAAGGCTTGCAGATGCACTTCAGACCATCCCCAAGGATGGGCTCTCGGGACTGTATGGAAGGCCAAGCCATGCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CCA 90 bp | CATGGCTTGGCCTTCCATACAGTCCCGAGAGCCCATCCTTGGGGATaGTCTGAAGTGCATCTGCAAGCCTTGCTGACCACTCAGCATCTC | + |
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Preference number: 1 (lower is better) Translates to: HGLAFHTVPRAHPWG*SEVHLQALLTTQHL Trigger: GAGATGCTGAGTGGTCAGCAAGGCTTGCAGATGCACTTCAGACCATCCCCAAGGATGGGCTCTCGGGACTGTATGGAAGGCCAAGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR GCA 90 bp | CAACACTGCTTCTCTTCACATTCACATGGGTTTACGGGAACTTATTaGCTTTCCCCCTGGAAAAACAATCTACCGAGGAACTTAAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: QHCFSSHSHGFTGTY*LSPWKNNLPRNLSS Trigger: ACTACTTAAGTTCCTCGGTAGATTGTTTTTCCAGGGGGAAAGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAGCAGTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR TCA 90 bp | ACTGACAAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTGCCACCTCCTCAAGGACTAGGTGGTCCTaGGTGGGCAGGGGTTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: TDKCQSRPRTQAATATSSRTRWS*VGRGSG Trigger: TCCGGAACCCCTGCCCACTCAGGACCACCTAGTCCT...TGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTTGTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGATCTGCAAGCCTTGCTaGCCACTCAGCATCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: KCQSRPRTQAATATSSEGICKPC*PLSISL Trigger: CAGTGAGATGCTGAGTGGTCAGCAAGGCTTGCAGAT...CCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CAA 90 bp | TTCCGGAAGTACAGCAGTCAGCACGTACTGTGCTTGGGGCATGGCTaGGCCTTCCATACAGTCCCGAGAGCCCATCCTTGGGGATGGTCT | + |
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Preference number: 2 (lower is better) Translates to: FRKYSSQHVLCLGHG*AFHTVPRAHPWGWS Trigger: AGACCATCCCCAAGGATGGGCTCTCGGGACTGTATGGAAGGCCAAGCCATGCCCCAAGCACAGTACGTGCTGACTGCTGTACTTCCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAACGACACCAGAGGTGCTTTAGAGAGATACCATGGGACAGGCTCAAGTCCGAGGAACCTTTGGTaGGCAAGAAACCCCGACGAG | + |
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Preference number: 2 (lower is better) Translates to: FLNDTRGALERYHGTGSSPRNLW*ARNPDE Trigger: CTCGTCGGGGTTTCTTGCTCACCAAAGGTTCCTCGG...ACTTGAGCCTGTCCCATGGTATCTCTCTAAAGCACCTCTGGTGTCGTTCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CCA 90 bp | CGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTAGCAGAGCTTGGGGCATGGCTTaGCCTTCCATACAGTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: RTLEFRVAGTFCPDKSSRAWGMA*PSIQSR Trigger: TCGGGACTGTATGGAAGGCCAAGCCATGCCCCAAGC...TCTGCTAGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGTTTAGAGAGATACCATaGGACAGGCTCAAGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: KCQSRPRTQAATATSSEGFREIP*DRLKYF Trigger: AAAATACTTGAGCCTGTCCCATGGTATCTCTCTAAA...CCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAGACGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTCCGAGAGCCCATCCTTaGGGATGGTCTGAAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LRRTLEFRVAGTFCPDKSPRAHP*GWSEVH Trigger: ATGCACTTCAGACCATCCCCAAGGATGGGCTCTCGG...AGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCGTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGCAACACTGCTTCTCTTCACATTCACATGGGTTTACGGGAACTTATTGCCTAGCACGTACTGTGCTTaGGGCATGGCTTGGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QATLLLFTFTWVYGNLLPSTYCA*GMAWPS Trigger: GGAAGGCCAAGCCATGCCCCAAGCACAGTACGTGCT...AGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAGCAGTGTTGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR TCA 90 bp | AACTTTCTGAACGACACCAGAGGTGCTTTAGAGAGATACCATGGGACAGGCTCACAGAATCAACTTTTCTaGCTGGGCGGTGACCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: NFLNDTRGALERYHGTGSQNQLF*LGGDQF Trigger: GAACTGGTCACCGCCCAGTCAGAAAAGTTGATTCTG...TGAGCCTGTCCCATGGTATCTCTCTAAAGCACCTCTGGTGTCGTTCAGAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGCAACACTGCTTCTCTTCACATTCACATGGGTTTACGGGAACTTATTGCCTAATCACAGTTGCTCTTaGGGACTCGCTGGTAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: QATLLLFTFTWVYGNLLPNHSCS*GLAGSH Trigger: GTGGCTACCAGCGAGTCCCCAAGAGCAACTGTGATT...AGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAGCAGTGTTGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CCA 90 bp | AACTTTCTGAACGACACCAGAGGTGCTTTAGAGAGATACCATGGGACAGGCTCACTCTTGAGTTCAGAGTaGCAGGTACCTTTTGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NFLNDTRGALERYHGTGSLLSSE*QVPFVL Trigger: CAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAG...TGAGCCTGTCCCATGGTATCTCTCTAAAGCACCTCTGGTGTCGTTCAGAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGAACGACACCAGAGGTGCTTTAGAGAGATACCATGGGACAGGCTCAAGTAACAAAAATCACAGTTaGTCTTGGGGACTCGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: FLNDTRGALERYHGTGSSNKNHS*SWGLAG Trigger: ACCAGCGAGTCCCCAAGAGCAACTGTGATTTTTGTT...ACTTGAGCCTGTCCCATGGTATCTCTCTAAAGCACCTCTGGTGTCGTTCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR GCA 90 bp | ATCTCAGACGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATAGCTCGCTCTCACTTTaGTGCAAGGATTTATTTATT | + |
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Preference number: 2 (lower is better) Translates to: ISDALLSSEWQVPFVLTNSSLSL*CKDLFI Trigger: AATAAATAAATCCTTGCAGCAAAGTGAGAGCGAGCT...ATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCGTCTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGTGCTTGGGGCATGGCTaGGCCTTCCATACAGTCCCG | + |
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Preference number: 3 (lower is better) Translates to: KCQSRPRTQAATATSSEGCLGHG*AFHTVP Trigger: CGGGACTGTATGGAAGGCCAAGCCATGCCCCAAGCA...CCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CCA 72 bp | ACAGCAGTCAGCACGTACTGTGCTTGGGGCATGGCTTaGCCTTCCATACAGTCCCGAGAGCCCATCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: TAVSTYCAWGMA*PSIQSREPILG Trigger: CCCAAGGATGGGCTCTCGGGACTGTATGGAAGGCCAAGCCATGCCCCAAGCACAGTACGTGCTGACTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR GCA 72 bp | CAAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTaGCACCTCCTCAGAGGGGTGATTTTTGGTCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: QVSVTTQDPGSY*HLLRGVIFGLG Trigger: CCCTAGACCAAAAATCACCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CCA 72 bp | GGCTTGGCCTTCCATACAGTCCCGAGAGCCCATCCTTaGGGATGGTCTGAAGTGCATCTGCAAGCCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GLAFHTVPRAHP*GWSEVHLQALL Trigger: CAGCAAGGCTTGCAGATGCACTTCAGACCATCCCCAAGGATGGGCTCTCGGGACTGTATGGAAGGCCAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR TCA 72 bp | CCATACAGTCCCGAGAGCCCATCCTTGGGGATGGTCTaGAGTGCATCTGCAAGCCTTGCTGACCACTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PYSPESPSLGMV*SASASLADHSA Trigger: TGCTGAGTGGTCAGCAAGGCTTGCAGATGCACTTCAGACCATCCCCAAGGATGGGCTCTCGGGACTGTATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CCA 72 bp | CGAGGCGACAGCTTCTCCTTCCACCAACAGTTTTCGTaGACCCTGGACAGAATCTCAGACGCACTCTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: RGDSFSFHQQFS*TLDRISDALLS Trigger: ACTCAAGAGTGCGTCTGAGATTCTGTCCAGGGTCCACGAAAACTGTTGGTGGAAGGAGAAGCTGTCGCCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CAA 90 bp | AGTGGGCAGGGGTTCCGGAAGTACAGCAGTCAGCACGTACTGTGCTTGGGGCATCAGCAGTCTTCAGTATaGCATGGGTATGAAATGTCC | + |
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Preference number: 3 (lower is better) Translates to: SGQGFRKYSSQHVLCLGHQQSSV*HGYEMS Trigger: GGACATTTCATACCCATGCAATACTGAAGACTGCTG...ATGCCCCAAGCACAGTACGTGCTGACTGCTGTACTTCCGGAACCCCTGCCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR-3UTR CAA 90 bp | CTCAGACGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTAAGCTCGCTCTCACTTaGCTGCAAGGATTTATTTAT | + |
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Preference number: 3 (lower is better) Translates to: LRRTLEFRVAGTFCPDKSKLALT*LQGFIY Trigger: ATAAATAAATCCTTGCAGCAAAGTGAGAGCGAGCTT...AGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCGTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR TCA 90 bp | CCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGTGATTTTTGGTCTAGGAGGCCAGCAGCGAGGTaGGCACGACGCGCGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PGPRQLLPPPQRGDFWSRRPAAR*ARRARR Trigger: GCGCCGCGCGCGTCGTGCTCACCTCGCTGCTGGCCT...CCTAGACCAAAAATCACCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR GCA 90 bp | AGTGGGCAGGGGTTCCGGAAGTACAGCAGTCAGCACGTACTGTGCTTGGGGCATAGTGTAGGTGGGTGGTaGAGGCCTCGGAGGTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SGQGFRKYSSQHVLCLGHSVGGW*RPRRSG Trigger: GCCGGACCTCCGAGGCCTGCACCACCCACCTACACT...ATGCCCCAAGCACAGTACGTGCTGACTGCTGTACTTCCGGAACCCCTGCCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | AAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGTGTAGTGTAGGTGGGTaGTGCAGGCCTCGGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KCQSRPRTQAATATSSEGCSVGG*CRPRRS Trigger: GGACCTCCGAGGCCTGCACCACCCACCTACACTACA...CCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR TCA 90 bp | ACTGACAAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTGCCACCTCCTCAGCTTTCCACACTGGCTaGGGAGGCTTCTCTCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TDKCQSRPRTQAATATSSAFHTG*GGFSRL Trigger: AAGGCGAGAGAAGCCTCCTCAGCCAGTGTGGAAAGC...TGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTTGTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGTGATTTTTGGTCTAGGACGGGCTTTCCACACTaGCTGAGGAGGCTTCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: PGPRQLLPPPQRGDFWSRTGFPH*LRRLLS Trigger: CGAGAGAAGCCTCCTCAGCCAGTGTGGAAAGCCCGT...CCTAGACCAAAAATCACCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CAA 72 bp | TACAGCAGTCAGCACGTACTGTGCTTGGGGCATGGCTaGGCCTTCCATACAGTCCCGAGAGCCCATCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: YSSQHVLCLGHG*AFHTVPRAHPW Trigger: CCAAGGATGGGCTCTCGGGACTGTATGGAAGGCCAAGCCATGCCCCAAGCACAGTACGTGCTGACTGCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR TCA 90 bp | CCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGTGATTTTTGGTCTAGGGCACTCAGGATACTGTaGGTAGAAGGTCTCATACCC | + |
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Preference number: 4 (lower is better) Translates to: PGPRQLLPPPQRGDFWSRALRIL*VEGLIP Trigger: GGGTATGAGACCTTCTACTCACAGTATCCTGAGTGC...CCTAGACCAAAAATCACCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR GCA 90 bp | AACTTTCTGAACGACACCAGAGGTGCTTTAGAGAGATACCATGGGACAGGCTCATCCTCCCGCAGCTTCTaGCAGTGGCGGCTACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NFLNDTRGALERYHGTGSSSRSF*QWRLPW Trigger: CCAGGGTAGCCGCCACTGGCAGAAGCTGCGGGAGGA...TGAGCCTGTCCCATGGTATCTCTCTAAAGCACCTCTGGTGTCGTTCAGAAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CAAGCAACACTGCTTCTCTTCACATTCACATGGGTTTACGGGAACTTATTGCCTCTGGCTGCCTCCCCTTaGCAGGAGGGCGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QATLLLFTFTWVYGNLLPLAASP*QEGGWR Trigger: CCTCCAGCCGCCCTCCTGCCAAGGGGAGGCAGCCAG...AGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAGCAGTGTTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | AAGTGTCAGTCACGACCCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGCTCAGTGTCTGTAAATaGCCTATAAACGTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KCQSRPRTQAATATSSEGLSVCK*PINVEL Trigger: CAGCTCCACGTTTATAGGCCATTTACAGACACTGAG...CCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTAGCAGAGGACTGTGGAGTGGGTaGGCACCGGTGCCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: RTLEFRVAGTFCPDKSSRGLWSG*APVPAL Trigger: CAGTGCTGGCACCGGTGCCCACCCACTCCACAGTCC...TCTGCTAGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTAGCAGATCTGGGACTGTGGAGTaGGTGGGCACCGGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RTLEFRVAGTFCPDKSSRSGTVE*VGTGAS Trigger: GCTGGCACCGGTGCCCACCCACTCCACAGTCCCAGA...TCTGCTAGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CAAGCAACACTGCTTCTCTTCACATTCACATGGGTTTACGGGAACTTATTGCCTCAGTGGCGGCTACCCTaGTCCAGCACGACCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: QATLLLFTFTWVYGNLLPQWRLP*SSTTTA Trigger: GGCGGTGGTCGTGCTGGACCAGGGTAGCCGCCACTG...AGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAGCAGTGTTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | AACTTTCTGAACGACACCAGAGGTGCTTTAGAGAGATACCATGGGACAGGCTCAGCTCCTGTGGAGCTCTaGGACTGTGGAGTGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NFLNDTRGALERYHGTGSAPVEL*DCGVGG Trigger: CCCACCCACTCCACAGTCCCAGAGCTCCACAGGAGC...TGAGCCTGTCCCATGGTATCTCTCTAAAGCACCTCTGGTGTCGTTCAGAAAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR GCA 90 bp | ATCTCAGACGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATAAACGTGGAGCTGGCTaGCTCCCCTTGGCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ISDALLSSEWQVPFVLTNKRGAG*LPLAGG Trigger: CCCTCCTGCCAAGGGGAGGCAGCCAGCTCCACGTTT...ATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCGTCTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CAAGCAACACTGCTTCTCTTCACATTCACATGGGTTTACGGGAACTTATTGCCTAGCATCTTGCGCAGCTaGCGCCCGTCGAGCGACGTG | + |
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Preference number: 4 (lower is better) Translates to: QATLLLFTFTWVYGNLLPSILRS*RPSSDV Trigger: CACGTCGCTCGACGGGCGCCAGCTGCGCAAGATGCT...AGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAGCAGTGTTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CAAGCAACACTGCTTCTCTTCACATTCACATGGGTTTACGGGAACTTATTGCCTGCCACGGGGCTCCTGTaGAGCTCTGGGACTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QATLLLFTFTWVYGNLLPATGLL*SSGTVE Trigger: CTCCACAGTCCCAGAGCTCCACAGGAGCCCCGTGGC...AGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAGCAGTGTTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CTCAGACGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTCGAGGAACTCGCACTTaGATGCGTGGTAGGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LRRTLEFRVAGTFCPDKSRGTRT*MRGRHF Trigger: GAAGTGCCTACCACGCATCCAAGTGCGAGTTCCTCG...AGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCGTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR GCA 90 bp | CGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTAGCAGAGAACTCGCACTTGGATaGGTGGTAGGCACTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RTLEFRVAGTFCPDKSSRELALG*VVGTSK Trigger: CTTGGAAGTGCCTACCACGCATCCAAGTGCGAGTTC...TCTGCTAGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CAA 72 bp | TTTTCGTGGACCCTGGACAGAATCTCAGACGCACTCTaGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: FSWTLDRISDAL*SSEWQVPFVLT Trigger: TGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCGTCTGAGATTCTGTCCAGGGTCCACGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | CGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTAGCAGATCTTCTCTTGTGAGGTaGGCTTCACATCCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: RTLEFRVAGTFCPDKSSRSSLVR*ASHPHS Trigger: GCTGTGTGGATGTGAAGCCCACCTCACAAGAGAAGA...TCTGCTAGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CCA 90 bp | AGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTAGCAGAATCAACTTTTCTAATGTCAGCAGTGTaGCTGTCCTCCACGGGGATC | + |
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Preference number: 4 (lower is better) Translates to: SSEWQVPFVLTNLAESTFLMSAV*LSSTGI Trigger: GATCCCCGTGGAGGACAGCCACACTGCTGACATTAG...AAAAGTTGATTCTGCTAGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CAA 72 bp | TTCTCCCGTCCTGGTCCAGCGAAGCTCGCTCTCACTTaGCTGCAAGGATTTATTTATTGCCTTATGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: FSRPGPAKLALT*LQGFIYCLMLE Trigger: TTCAAGCATAAGGCAATAAATAAATCCTTGCAGCAAAGTGAGAGCGAGCTTCGCTGGACCAGGACGGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| 3UTR CAA 72 bp | CTTCTCTTCACATTCACATGGGTTTACGGGAACTTATaGCCTTTCCCCCTGGAAAAACAATCTACCGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LLFTFTWVYGNL*PFPLEKQSTEE Trigger: TTCCTCGGTAGATTGTTTTTCCAGGGGGAAAGGCAATAAGTTCCCGTAAACCCATGTGAATGTGAAGAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS GCA 90 bp | AGCGAGGTGAGCACGACGCGCGCGGCGCTCTCCTCCCGCAGCTTCTaGCAGTGGCGGCTACCCTGGTCCAGCACGACCACCGCCGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SEVSTTRAALSSRSF*QWRLPWSSTTTAAT Trigger: TGTGGCGGCGGTGGTCGTGCTGGACCAGGGTAGCCGCCACTGGCAGAAGCTGCGGGAGGAGAGCGCCGCGCGCGTCGTGCTCACCTCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CAA 90 bp | CCAGGACCCAGGCAGCTACTGCCACCTCCTCAGAGGGGTGATTTTTGGTCTAGGGCTGTGATGTGCAGGTaGGCGAGGAACTCGCACTTG | + |
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Preference number: 5 (lower is better) Translates to: PGPRQLLPPPQRGDFWSRAVMCR*ARNSHL Trigger: CAAGTGCGAGTTCCTCGCCAACCTGCACATCACAGC...CCTAGACCAAAAATCACCCCTCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS-3UTR CAA 90 bp | CTCAGACGCACTCTTGAGTTCAGAGTGGCAGGTACCTTTTGTCCTGACAAATCTGAGTTGAGGTTGACGTaGAGCGAGCCGCGCACGCTC | + |
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Preference number: 5 (lower is better) Translates to: LRRTLEFRVAGTFCPDKSELRLT*SEPRTL Trigger: GAGCGTGCGCGGCTCGCTCAACGTCAACCTCAACTC...AGATTTGTCAGGACAAAAGGTACCTGCCACTCTGAACTCAAGAGTGCGTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS GCA 72 bp | AGCACGACGCGCGCGGCGCTCTCCTCCCGCAGCTTCTaGCAGTGGCGGCTACCCTGGTCCAGCACGACCACC | + |
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Preference number: 6 (lower is better) Translates to: STTRAALSSRSF*QWRLPWSSTTT Trigger: GGTGGTCGTGCTGGACCAGGGTAGCCGCCACTGGCAGAAGCTGCGGGAGGAGAGCGCCGCGCGCGTCGTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS GCA 72 bp | CCTCCACGGGGATCCACTTGTAGTGTAGGTGGGTGGTaGAGGCCTCGGAGGTCCGGCGGGAAACATTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PPRGSTCSVGGW*RPRRSGGKHSA Trigger: TGCTGAATGTTTCCCGCCGGACCTCCGAGGCCTGCACCACCCACCTACACTACAAGTGGATCCCCGTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS TCA 72 bp | GCTGAGGAGGCTTCTCTCGCCTTCGATCTTCTCTTGTaGGGTGGGCTTCACATCCACACAGCACTCAGGATA | + |
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Preference number: 6 (lower is better) Translates to: AEEASLAFDLLL*GGLHIHTALRI Trigger: TATCCTGAGTGCTGTGTGGATGTGAAGCCCACCTCACAAGAGAAGATCGAAGGCGAGAGAAGCCTCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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| CDS CCA 72 bp | GGAGGCTTCTCTCGCCTTCGATCTTCTCTTGTGAGGTaGGCTTCACATCCACACAGCACTCAGGATACTGTG | + |
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Preference number: 6 (lower is better) Translates to: GGFSRLRSSLVR*ASHPHSTQDTV Trigger: CACAGTATCCTGAGTGCTGTGTGGATGTGAAGCCCACCTCACAAGAGAAGATCGAAGGCGAGAGAAGCCTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038287.7 |
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