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Pregenerated sensors for DUSP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031530

Ensembl transcript IDs: ENSMUST00000033930.5

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCTGTGGTTGGCCAAGGAGAAATGGAGACGGAGCCTGGTCACCTaGTCCCCCACTGGTCAGTCCCTATTTGCTGTTCACAGGTGGCTG +
Preference number: 1 (lower is better)
Translates to: ALWLAKEKWRRSLVT*SPTGQSLFAVHRWL
Trigger: CAGCCACCTGTGAACAGCAAATAGGGACTGACCAGTGGGGGATCAGGTGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAACCACAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 90 bp CCTAGCTGGCCCTGTGGTTGGCCAAGGAGAAATGGAGACGGAGCCTaGTCACCTGATCCCCCACTGGTCAGTCCCTATTTGCTGTTCACA +
Preference number: 1 (lower is better)
Translates to: PSWPCGWPRRNGDGA*SPDPPLVSPYLLFT
Trigger: TGTGAACAGCAAATAGGGACTGACCAGTGGGGGATCAGGTGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAACCACAGGGCCAGCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 90 bp ATGTGTATTCAAAGTCGTTATTGCCATCCTAGCTGGCCCTGTGGTTaGCCAAGGAGAAATGGAGACGGAGCCTGGTCACCTGATCCCCCA +
Preference number: 1 (lower is better)
Translates to: MCIQSRYCHPSWPCG*PRRNGDGAWSPDPP
Trigger: TGGGGGATCAGGTGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAACCACAGGGCCAGCTAGGATGGCAATAACGACTTTGAATACACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 90 bp TGTTTGTTTTTAATGTGTATTCAAAGTCGTTATTGCCATCCTAGCTaGCCCTGTGGTTGGCCAAGGAGAAATGGAGACGGAGCCTGGTCA +
Preference number: 1 (lower is better)
Translates to: CLFLMCIQSRYCHPS*PCGWPRRNGDGAWS
Trigger: TGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAACCACAGGGCCAGCTAGGATGGCAATAACGACTTTGAATACACATTAAAAACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR TCA 90 bp CCAATGTATCCGCGAGAGGGAGATTCATTTTTAGTTCATCTTCAGTaGTCTGGTTCTGATCTGGCCTTACCAAATGATTCACGGCAGGAA +
Preference number: 1 (lower is better)
Translates to: PMYPREGDSFLVHLQ*SGSDLALPNDSRQE
Trigger: TTCCTGCCGTGAATCATTTGGTAAGGCCAGATCAGAACCAGATCACTGAAGATGAACTAAAAATGAATCTCCCTCTCGCGGATACATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR GCA 90 bp GCATGTCACCCTGCGTCTGATGGTAACCATGGTGACCACCTACCCGACGCTCCTTTGGTTGCGCACATTTaGCAGGATCTGTGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: ACHPASDGNHGDHLPDAPLVAHI*QDLWGF
Trigger: GAAACCCCACAGATCCTGGCAAATGTGCGCAACCAA...AGGAGCGTCGGGTAGGTGGTCACCATGGTTACCATCAGACGCAGGGTGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR GCA 90 bp GCATGTCACCCTGCGTCTGATGGTAACCATGGTGACCACCTACCCGACGCTCCTGAGTCACTAGACTCCTaGACACACATGCTGAGGTTC +
Preference number: 2 (lower is better)
Translates to: ACHPASDGNHGDHLPDAPESLDS*THMLRF
Trigger: GAACCTCAGCATGTGTGTGCAGGAGTCTAGTGACTC...AGGAGCGTCGGGTAGGTGGTCACCATGGTTACCATCAGACGCAGGGTGACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR CCA 90 bp TTTCCCTCTCCACTCAATAAAAATTGGTTGCGCACATTTGCCAGGATCTGTGGGTGGCTGGCAACTGGCTaGGGGCCGACTCTGGATTTG +
Preference number: 2 (lower is better)
Translates to: FPSPLNKNWLRTFARICGWLATG*GPTLDL
Trigger: CAAATCCAGAGTCGGCCCCCAGCCAGTTGCCAGCCA...CCCACAGATCCTGGCAAATGTGCGCAACCAATTTTTATTGAGTGGAGAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR CCA 90 bp CTCGACTGTGTGACCTCAACAGAAATATCTCCCAGAGTCACTAGACTCCTGCACAGCTGGCCCTGTGGTTaGCCAAGGAGAAATGGAGAC +
Preference number: 2 (lower is better)
Translates to: LDCVTSTEISPRVTRLLHSWPCG*PRRNGD
Trigger: GTCTCCATTTCTCCTTGGCCAACCACAGGGCCAGCT...GTGCAGGAGTCTAGTGACTCTGGGAGATATTTCTGTTGAGGTCACACAGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR CCA 90 bp CCCCAGCCAAACAGACCGCTGGAGAGAAAAATCTCACGTGGCTGGGTCAGTGGGCCACTCAATAAAAATTaGTTGCGCACATTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: PQPNRPLERKISRGWVSGPLNKN*LRTFAR
Trigger: CCTGGCAAATGTGCGCAACCAATTTTTATTGAGTGG...CCCACTGACCCAGCCACGTGAGATTTTTCTCTCCAGCGGTCTGTTTGGCTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR GCA 90 bp CTGCTCGACTGTGTGACCTCAACAGAAATATCTCCCAGAGTCACTAGACTCCTGTGGTCAGTCCCTATTTaGTGTTCACAGGTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LLDCVTSTEISPRVTRLLWSVPI*CSQVAG
Trigger: GCCAGCCACCTGTGAACAGCAAATAGGGACTGACCA...CAGGAGTCTAGTGACTCTGGGAGATATTTCTGTTGAGGTCACACAGTCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR CCA 90 bp TTTCCCTCTCCACTCAATAAAAATTGGTTGCGCACATTTGCCAGGATCTGTGGGTTGGCCAAGGAGAAATaGAGACGGAGCCTGGTCACC +
Preference number: 2 (lower is better)
Translates to: FPSPLNKNWLRTFARICGLAKEK*RRSLVT
Trigger: GGTGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAA...CCCACAGATCCTGGCAAATGTGCGCAACCAATTTTTATTGAGTGGAGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR GCA 72 bp CCTGGTCACCTGATCCCCCACTGGTCAGTCCCTATTTaGTGTTCACAGGTGGCTGGCAACTGGCTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: PGHLIPHWSVPI*CSQVAGNWLGA
Trigger: GGCCCCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGACTGACCAGTGGGGGATCAGGTGACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 72 bp CCACTGGTCAGTCCCTATTTGCTGTTCACAGGTGGCTaGCAACTGGCTGGGGGCCGACTCTGGATTTGGGGT +
Preference number: 3 (lower is better)
Translates to: PLVSPYLLFTGG*QLAGGRLWIWG
Trigger: ACCCCAAATCCAGAGTCGGCCCCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGACTGACCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 72 bp TCAGTCCCTATTTGCTGTTCACAGGTGGCTGGCAACTaGCTGGGGGCCGACTCTGGATTTGGGGTCCAGAGA +
Preference number: 3 (lower is better)
Translates to: SVPICCSQVAGN*LGADSGFGVQR
Trigger: TCTCTGGACCCCAAATCCAGAGTCGGCCCCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 72 bp GAAATGGAGACGGAGCCTGGTCACCTGATCCCCCACTaGTCAGTCCCTATTTGCTGTTCACAGGTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: EMETEPGHLIPH*SVPICCSQVAG
Trigger: GCCAGCCACCTGTGAACAGCAAATAGGGACTGACCAGTGGGGGATCAGGTGACCAGGCTCCGTCTCCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 72 bp CCCTGTGGTTGGCCAAGGAGAAATGGAGACGGAGCCTaGTCACCTGATCCCCCACTGGTCAGTCCCTATTTG +
Preference number: 3 (lower is better)
Translates to: PCGWPRRNGDGA*SPDPPLVSPYL
Trigger: CAAATAGGGACTGACCAGTGGGGGATCAGGTGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAACCACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR TCA 72 bp TTGGCCAAGGAGAAATGGAGACGGAGCCTGGTCACCTaGTCCCCCACTGGTCAGTCCCTATTTGCTGTTCAC +
Preference number: 3 (lower is better)
Translates to: LAKEKWRRSLVT*SPTGQSLFAVH
Trigger: GTGAACAGCAAATAGGGACTGACCAGTGGGGGATCAGGTGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 72 bp CAAAGTCGTTATTGCCATCCTAGCTGGCCCTGTGGTTaGCCAAGGAGAAATGGAGACGGAGCCTGGTCACCT +
Preference number: 3 (lower is better)
Translates to: QSRYCHPSWPCG*PRRNGDGAWSP
Trigger: AGGTGACCAGGCTCCGTCTCCATTTCTCCTTGGCCAACCACAGGGCCAGCTAGGATGGCAATAACGACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 72 bp GGAAGAAACCACTCTATCCCCAGCCAAACAGACCGCTaGAGAGAAAAATCTCACGTGGCTGGGTCAGTGGGC +
Preference number: 3 (lower is better)
Translates to: GRNHSIPSQTDR*REKSHVAGSVG
Trigger: GCCCACTGACCCAGCCACGTGAGATTTTTCTCTCCAGCGGTCTGTTTGGCTGGGGATAGAGTGGTTTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR CAA 90 bp CATGTCACCCTGCGTCTGATGGTAACCATGGTGACCACCTACCCGACGCTCCTCCTCAATAAAAATTGGTaGCGCACATTTGCCAGGATC +
Preference number: 3 (lower is better)
Translates to: HVTLRLMVTMVTTYPTLLLNKNW*RTFARI
Trigger: GATCCTGGCAAATGTGCGCAACCAATTTTTATTGAG...GAGGAGCGTCGGGTAGGTGGTCACCATGGTTACCATCAGACGCAGGGTGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR TCA 72 bp TGCTCACACACCTGTGTGTTTCTCTGCTCGACTGTGTaGCCTCAACAGAAATATCTCCCAGAGTCACTAGAC +
Preference number: 3 (lower is better)
Translates to: CSHTCVFLCSTV*PQQKYLPESLD
Trigger: GTCTAGTGACTCTGGGAGATATTTCTGTTGAGGTCACACAGTCGAGCAGAGAAACACACAGGTGTGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CCA 72 bp TTAATGTGTATTCAAAGTCGTTATTGCCATCCTAGCTaGCCCTGTGGTTGGCCAAGGAGAAATGGAGACGGA +
Preference number: 3 (lower is better)
Translates to: LMCIQSRYCHPS*PCGWPRRNGDG
Trigger: TCCGTCTCCATTTCTCCTTGGCCAACCACAGGGCCAGCTAGGATGGCAATAACGACTTTGAATACACATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR-3UTR CAA 90 bp GGAGGGCGTTTCAGAGTATTCACCAGATTTTGTAACAAGAATTTCTTGGTATGTATTGGTTGCGCACATTaGCCAGGATCTGTGGGGTTT +
Preference number: 3 (lower is better)
Translates to: GGRFRVFTRFCNKNFLVCIGCAH*PGSVGF
Trigger: AAACCCCACAGATCCTGGCAAATGTGCGCAACCAAT...ACATACCAAGAAATTCTTGTTACAAAATCTGGTGAATACTCTGAAACGCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR TCA 72 bp CCGCGAGAGGGAGATTCATTTTTAGTTCATCTTCAGTaGTCTGGTTCTGATCTGGCCTTACCAAATGATTCA +
Preference number: 3 (lower is better)
Translates to: PREGDSFLVHLQ*SGSDLALPNDS
Trigger: TGAATCATTTGGTAAGGCCAGATCAGAACCAGATCACTGAAGATGAACTAAAAATGAATCTCCCTCTCGCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR GCA 72 bp CCTCAACAGAAATATCTCCCAGAGTCACTAGACTCCTaGACACACATGCTGAGGTTCTCAATATGCATTAAA +
Preference number: 3 (lower is better)
Translates to: PQQKYLPESLDS*THMLRFSICIK
Trigger: TTTAATGCATATTGAGAACCTCAGCATGTGTGTGCAGGAGTCTAGTGACTCTGGGAGATATTTCTGTTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR TCA 72 bp AATAATGAGGTAAATTTCTACCTGCAAAGTAAAAACTaGCACAGAAACCAAGTCTTCTCTGGCAGCGGAAAC +
Preference number: 3 (lower is better)
Translates to: NNEVNFYLQSKN*HRNQVFSGSGN
Trigger: GTTTCCGCTGCCAGAGAAGACTTGGTTTCTGTGTCAGTTTTTACTTTGCAGGTAGAAATTTACCTCATTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR TCA 90 bp CCCCCACTGGTCAGTCCCTATTTGCTGTTCACAGGTGGCTGGCAACTGGCTGGGAGCTGGGGGAGGTGGTaGTGGGGCTGTGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: PPLVSPYLLFTGGWQLAGSWGRW*WGCAGT
Trigger: CGTACCTGCACAGCCCCATCACCACCTCCCCCAGCT...CCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGACTGACCAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR GCA 90 bp GCATGTCACCCTGCGTCTGATGGTAACCATGGTGACCACCTACCCGACGCTCCTCCAGCAGCAGGCACTTaGCGCCGCTCAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ACHPASDGNHGDHLPDAPPAAGT*RRSAAP
Trigger: TGGGGCTGCTGAGCGGCGGCAAGTGCCTGCTGCTGG...AGGAGCGTCGGGTAGGTGGTCACCATGGTTACCATCAGACGCAGGGTGACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR GCA 90 bp GTCCCTATTTGCTGTTCACAGGTGGCTGGCAACTGGCTGGGGGCCGACTCTGGAGAGCCAGAAACGGCCTaGAGTCCAGCAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: VPICCSQVAGNWLGADSGEPETA*SPAAGT
Trigger: AGTGCCTGCTGCTGGACTGCAGGCCGTTTCTGGCTC...TCCAGAGTCGGCCCCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR GCA 90 bp CCCCAGCCAAACAGACCGCTGGAGAGAAAAATCTCACGTGGCTGGGTCAGTGGGGTGGTGATGGGGCTGTaGAGGTACGGCAGGTTACTG +
Preference number: 4 (lower is better)
Translates to: PQPNRPLERKISRGWVSGVVMGL*RYGRLL
Trigger: CAGTAACCTGCCGTACCTGCACAGCCCCATCACCAC...CCCACTGACCCAGCCACGTGAGATTTTTCTCTCCAGCGGTCTGTTTGGCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp GCAGGAAAATCTGAACGGCACCCAGTTTTCCAGGAGCACCTTGGTAAAGATGGCGGTACGGCAGGTTACTaGGGGCCGCGTGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: AGKSERHPVFQEHLGKDGGTAGY*GPRARP
Trigger: TGGGCGTGCACGCGGCCCCCAGTAACCTGCCGTACC...GCCATCTTTACCAAGGTGCTCCTGGAAAACTGGGTGCCGTTCAGATTTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp ACCAAGTCTTCTCTGGCAGCGGAAACCGCCGTTATTGCTTATGTTAGAGTGTTTAGCCCCAAGGCGCCGTaGCTGCCGCTGCCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: TKSSLAAETAVIAYVRVFSPKAP*LPLPLP
Trigger: CGGCAACGGCAGCGGCAGCCACGGCGCCTTGGGGCT...AAACACTCTAACATAAGCAATAACGGCGGTTTCCGCTGCCAGAGAAGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp CTGCTCGACTGTGTGACCTCAACAGAAATATCTCCCAGAGTCACTAGACTCCTGGGGAGGTACAGGGGGTaGGATGGCGGCCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLDCVTSTEISPRVTRLLGRYRG*DGGQGL
Trigger: AAGGCCCTGGCCGCCATCCCACCCCCTGTACCTCCC...CAGGAGTCTAGTGACTCTGGGAGATATTTCTGTTGAGGTCACACAGTCGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp GCATGTCACCCTGCGTCTGATGGTAACCATGGTGACCACCTACCCGACGCTCCTCTGATGTCGGCCTTGTaGTTGTCTTCGACGGGGATG +
Preference number: 4 (lower is better)
Translates to: ACHPASDGNHGDHLPDAPLMSAL*LSSTGM
Trigger: CATCCCCGTCGAAGACAACCACAAGGCCGACATCAG...AGGAGCGTCGGGTAGGTGGTCACCATGGTTACCATCAGACGCAGGGTGACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR TCA 90 bp GCAGGAAAATCTGAACGGCACCCAGTTTTCCAGGAGCACCTTGGTAAAGATGGCGCTCGTCGTAGACGATaGCAGCCGAGTAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGKSERHPVFQEHLGKDGARRRR*QPSRGQ
Trigger: CTGGCCTCTACTCGGCTGTCATCGTCTACGACGAGC...GCCATCTTTACCAAGGTGCTCCTGGAAAACTGGGTGCCGTTCAGATTTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR GCA 90 bp CTGCTCGACTGTGTGACCTCAACAGAAATATCTCCCAGAGTCACTAGACTCCTGCGACCAGCGACACCGTaGTGTCCTCCCGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: LLDCVTSTEISPRVTRLLRPATP*CPPGDS
Trigger: AGAGTCTCCGGGAGGACAGCACGGTGTCGCTGGTCG...CAGGAGTCTAGTGACTCTGGGAGATATTTCTGTTGAGGTCACACAGTCGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR TCA 90 bp CTCGACTGTGTGACCTCAACAGAAATATCTCCCAGAGTCACTAGACTCCTGCACCATTCAGGAGGGCCGTaGTCCCCAGGGCATCCAACA +
Preference number: 4 (lower is better)
Translates to: LDCVTSTEISPRVTRLLHHSGGP*SPGHPT
Trigger: TGTTGGATGCCCTGGGGATCACGGCCCTCCTGAATG...GTGCAGGAGTCTAGTGACTCTGGGAGATATTTCTGTTGAGGTCACACAGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR GCA 90 bp GCAGGAAAATCTGAACGGCACCCAGTTTTCCAGGAGCACCTTGGTAAAGATGGCCATCCAACATGTCCCTaGGGGCAGCATGGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AGKSERHPVFQEHLGKDGHPTCP*GQHGRH
Trigger: GTGCCTACCATGCTGCCCGCAGGGACATGTTGGATG...GCCATCTTTACCAAGGTGCTCCTGGAAAACTGGGTGCCGTTCAGATTTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR GCA 90 bp TGTTTGTTTTTAATGTGTATTCAAAGTCGTTATTGCCATCCTAGCTGGCCCTGTGCAGGCAGATGTCCGTaGGCTCCGCGTTCCGGCGCA +
Preference number: 4 (lower is better)
Translates to: CLFLMCIQSRYCHPSWPCAGRCP*APRSGA
Trigger: TGCGCCGGAACGCGGAGCGCACGGACATCTGCCTGC...ACAGGGCCAGCTAGGATGGCAATAACGACTTTGAATACACATTAAAAACAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR GCA 90 bp GGAGGGCGTTTCAGAGTATTCACCAGATTTTGTAACAAGAATTTCTTGGTATGTTTCCGGCGCAACGCCTaGACGACCAGCGACACCGTG +
Preference number: 4 (lower is better)
Translates to: GGRFRVFTRFCNKNFLVCFRRNA*TTSDTV
Trigger: CACGGTGTCGCTGGTCGTGCAGGCGTTGCGCCGGAA...ACATACCAAGAAATTCTTGTTACAAAATCTGGTGAATACTCTGAAACGCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR TCA 90 bp TTTCCCTCTCCACTCAATAAAAATTGGTTGCGCACATTTGCCAGGATCTGTGGGGGTTCATCAGCCTTTTaGGCACGCTGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: FPSPLNKNWLRTFARICGGSSAF*ARCSPS
Trigger: AGATGGACTGCAGCGTGCTCAAAAGGCTGATGAACC...CCCACAGATCCTGGCAAATGTGCGCAACCAATTTTTATTGAGTGGAGAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR TCA 90 bp TTTCCCTCTCCACTCAATAAAAATTGGTTGCGCACATTTGCCAGGATCTGTGGGGTGATTGGGACAGTCTaGAGAGACATTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FPSPLNKNWLRTFARICGVIGTV*RDIQEG
Trigger: GCCCTCCTGAATGTCTCTTCAGACTGTCCCAATCAC...CCCACAGATCCTGGCAAATGTGCGCAACCAATTTTTATTGAGTGGAGAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp TCCCTATTTGCTGTTCACAGGTGGCTGGCAACTGGCTGGGGGCCGACTCTGGATTTTAGAGCAGAATTCTaGGTATTCAGAAGAAAACCT +
Preference number: 4 (lower is better)
Translates to: SLFAVHRWLATGWGPTLDFRAEF*VFRRKP
Trigger: AGGTTTTCTTCTGAATACCCAGAATTCTGCTCTAAA...ATCCAGAGTCGGCCCCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp TATGCGTATCTTTTTATTCAAAAGAGGGAGGGCGTTTCAGAGTATTCACCAGATGTACAGGGGGTGGGATaGCGGCCAGGGCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: YAYLFIQKREGVSEYSPDVQGVG*RPGPWF
Trigger: AAACCAAGGCCCTGGCCGCCATCCCACCCCCTGTAC...ATCTGGTGAATACTCTGAAACGCCCTCCCTCTTTTGAATAAAAAGATACGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp TGTTTGTTTTTAATGTGTATTCAAAGTCGTTATTGCCATCCTAGCTGGCCCTGTAGACGAACTGCGAGGTaGGGGTCGGGGTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CLFLMCIQSRYCHPSWPCRRTAR*GSGWPF
Trigger: GAAAGGCCACCCCGACCCCCACCTCGCAGTTCGTCT...ACAGGGCCAGCTAGGATGGCAATAACGACTTTGAATACACATTAAAAACAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR TCA 90 bp CTGCTAAATCTGAAACACCCAATGTATCCGCGAGAGGGAGATTCATTTTTAGTTGACGTGGTGAGCACCTaGGACTCAAACTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLNLKHPMYPREGDSFLVDVVST*DSNCSN
Trigger: GTTGCTGCAGTTTGAGTCTCAGGTGCTCACCACGTC...AACTAAAAATGAATCTCCCTCTCGCGGATACATTGGGTGTTTCAGATTTAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR TCA 90 bp TATGCGTATCTTTTTATTCAAAAGAGGGAGGGCGTTTCAGAGTATTCACCAGATCAGACACAGGGAAGCTaGAGACGAACTGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: YAYLFIQKREGVSEYSPDQTQGS*RRTARW
Trigger: CCACCTCGCAGTTCGTCTTCAGCTTCCCTGTGTCTG...ATCTGGTGAATACTCTGAAACGCCCTCCCTCTTTTGAATAAAAAGATACGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
3UTR CAA 72 bp TTCCCTCTCCACTCAATAAAAATTGGTTGCGCACATTaGCCAGGATCTGTGGGGTTTCATAACTTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: FPLHSIKIGCAH*PGSVGFHNFQA
Trigger: AGCTTGAAAGTTATGAAACCCCACAGATCCTGGCAAATGTGCGCAACCAATTTTTATTGAGTGGAGAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CCA 90 bp GCTAAATCTGAAACACCCAATGTATCCGCGAGAGGGAGATTCATTTTTAGTTCAGACCCTCAAAGTGATTaGGACAGTCTGAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: AKSETPNVSARGRFIFSSDPQSD*DSLKRH
Trigger: ATGTCTCTTCAGACTGTCCCAATCACTTTGAGGGTC...TGAACTAAAAATGAATCTCCCTCTCGCGGATACATTGGGTGTTTCAGATTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 90 bp TGCCGCCGCTCAGCAGCCCCAAGGCGCCGTGGCTGCCGCTGCCGTTaGCGCCCGCGCTGCCGCCGCCGCCGTTCTCATCCCGGTTCATCA +
Preference number: 5 (lower is better)
Translates to: CRRSAAPRRRGCRCR*RPRCRRRRSHPGSS
Trigger: TGATGAACCGGGATGAGAACGGCGGCGGCGGCAGCGCGGGCGGCAACGGCAGCGGCAGCCACGGCGCCTTGGGGCTGCTGAGCGGCGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 90 bp TGCGCTCCGCGTTCCGGCGCAACGCCTGCACGACCAGCGACACCGTaGTGTCCTCCCGGAGACTCTCGGCGCGCGGGCTGCGCTCGTCGT +
Preference number: 5 (lower is better)
Translates to: CAPRSGATPARPATP*CPPGDSRRAGCARR
Trigger: ACGACGAGCGCAGCCCGCGCGCCGAGAGTCTCCGGGAGGACAGCACGGTGTCGCTGGTCGTGCAGGCGTTGCGCCGGAACGCGGAGCGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS TCA 90 bp CCTCCCGGAGACTCTCGGCGCGCGGGCTGCGCTCGTCGTAGACGATaGCAGCCGAGTAGAGGCCAGAGCGCAGGCGGGCACGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: PPGDSRRAGCARRRR*QPSRGQSAGGHAPL
Trigger: AAGAGGTGCGTGCCCGCCTGCGCTCTGGCCTCTACTCGGCTGTCATCGTCTACGACGAGCGCAGCCCGCGCGCCGAGAGTCTCCGGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 90 bp TTAAGCAGGCAGATGTCCGTGCGCTCCGCGTTCCGGCGCAACGCCTaGACGACCAGCGACACCGTGCTGTCCTCCCGGAGACTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LSRQMSVRSAFRRNA*TTSDTVLSSRRLSA
Trigger: CGCCGAGAGTCTCCGGGAGGACAGCACGGTGTCGCTGGTCGTGCAGGCGTTGCGCCGGAACGCGGAGCGCACGGACATCTGCCTGCTTAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS CCA 90 bp GCAGCGGGGTTCCACAGGAGCTGCAGCCCAGGTCCAAGGACTCATTaGTGCTGGGAGGTACAGGGGGTGGGATGGCGGCCAGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: AAGFHRSCSPGPRTH*CWEVQGVGWRPGPW
Trigger: CCAAGGCCCTGGCCGCCATCCCACCCCCTGTACCTCCCAGCACCAATGAGTCCTTGGACCTGGGCTGCAGCTCCTGTGGAACCCCGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 90 bp GCGGGGTTCCACAGGAGCTGCAGCCCAGGTCCAAGGACTCATTGGTaGTGGGAGGTACAGGGGGTGGGATGGCGGCCAGGGCCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: AGFHRSCSPGPRTHW*WEVQGVGWRPGPWF
Trigger: AAACCAAGGCCCTGGCCGCCATCCCACCCCCTGTACCTCCCAGCACCAATGAGTCCTTGGACCTGGGCTGCAGCTCCTGTGGAACCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS TCA 90 bp CCGCGCTGCCGCCGCCGCCGTTCTCATCCCGGTTCATCAGCCTTTTaGGCACGCTGCAGTCCATCTCCCGCAGTTCCTCCATCGTCACCA +
Preference number: 5 (lower is better)
Translates to: PRCRRRRSHPGSSAF*ARCSPSPAVPPSSP
Trigger: TGGTGACGATGGAGGAACTGCGGGAGATGGACTGCAGCGTGCTCAAAAGGCTGATGAACCGGGATGAGAACGGCGGCGGCGGCAGCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 90 bp GTGGTGATGGGGCTGTGCAGGTACGGCAGGTTACTGGGGGCCGCGTaGACGCCCACAGACACAGGGAAGCTGAAGACGAACTGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: VVMGLCRYGRLLGAA*TPTDTGKLKTNCEV
Trigger: CACCTCGCAGTTCGTCTTCAGCTTCCCTGTGTCTGTGGGCGTGCACGCGGCCCCCAGTAACCTGCCGTACCTGCACAGCCCCATCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CAA 90 bp TCCCTATTTGCTGTTCACAGGTGGCTGGCAACTGGCTGGGGGCCGACTCTGGATTCCAGCAGCAGGCACTaGCCGCCGCTCAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SLFAVHRWLATGWGPTLDSSSRH*PPLSSP
Trigger: GGGGCTGCTGAGCGGCGGCAAGTGCCTGCTGCTGGA...ATCCAGAGTCGGCCCCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS CCA 90 bp GCAGCCCAGGTCCAAGGACTCATTGGTGCTGGGAGGTACAGGGGGTaGGATGGCGGCCAGGGCCTTGGTTTTAGAGCAGAATTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: AAQVQGLIGAGRYRG*DGGQGLGFRAEFWV
Trigger: TACCCAGAATTCTGCTCTAAAACCAAGGCCCTGGCCGCCATCCCACCCCCTGTACCTCCCAGCACCAATGAGTCCTTGGACCTGGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CAA 90 bp GTCCCTATTTGCTGTTCACAGGTGGCTGGCAACTGGCTGGGGGCCGACTCTGGAAGGTCCAAGGACTCATaGGTGCTGGGAGGTACAGGG +
Preference number: 5 (lower is better)
Translates to: VPICCSQVAGNWLGADSGRSKDS*VLGGTG
Trigger: CCCTGTACCTCCCAGCACCAATGAGTCCTTGGACCT...TCCAGAGTCGGCCCCCAGCCAGTTGCCAGCCACCTGTGAACAGCAAATAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CAA 90 bp CATGTCACCCTGCGTCTGATGGTAACCATGGTGACCACCTACCCGACGCTCCTCATGTCGGCCTTGTGGTaGTCTTCGACGGGGATGCAC +
Preference number: 5 (lower is better)
Translates to: HVTLRLMVTMVTTYPTLLMSALW*SSTGMH
Trigger: GTGCATCCCCGTCGAAGACAACCACAAGGCCGACAT...GAGGAGCGTCGGGTAGGTGGTCACCATGGTTACCATCAGACGCAGGGTGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS TCA 90 bp CCTCAAAGTGATTGGGACAGTCTGAAGAGACATTCAGGAGGGCCGTaGTCCCCAGGGCATCCAACATGTCCCTGCGGGCAGCATGGTAGG +
Preference number: 5 (lower is better)
Translates to: PQSDWDSLKRHSGGP*SPGHPTCPCGQHGR
Trigger: CCTACCATGCTGCCCGCAGGGACATGTTGGATGCCCTGGGGATCACGGCCCTCCTGAATGTCTCTTCAGACTGTCCCAATCACTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS-3UTR CAA 90 bp CCCCAGCCAAACAGACCGCTGGAGAGAAAAATCTCACGTGGCTGGGTCAGTGGGCGGTTCATCAGCCTTTaGAGCACGCTGCAGTCCATC +
Preference number: 5 (lower is better)
Translates to: PQPNRPLERKISRGWVSGRFISL*STLQSI
Trigger: GATGGACTGCAGCGTGCTCAAAAGGCTGATGAACCG...CCCACTGACCCAGCCACGTGAGATTTTTCTCTCCAGCGGTCTGTTTGGCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 72 bp CGTTCCGGCGCAACGCCTGCACGACCAGCGACACCGTaGTGTCCTCCCGGAGACTCTCGGCGCGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RSGATPARPATP*CPPGDSRRAGC
Trigger: GCAGCCCGCGCGCCGAGAGTCTCCGGGAGGACAGCACGGTGTCGCTGGTCGTGCAGGCGTTGCGCCGGAACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS TCA 72 bp GACTCTCGGCGCGCGGGCTGCGCTCGTCGTAGACGATaGCAGCCGAGTAGAGGCCAGAGCGCAGGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: DSRRAGCARRRR*QPSRGQSAGGH
Trigger: GTGCCCGCCTGCGCTCTGGCCTCTACTCGGCTGTCATCGTCTACGACGAGCGCAGCCCGCGCGCCGAGAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 72 bp CAGATGTCCGTGCGCTCCGCGTTCCGGCGCAACGCCTaGACGACCAGCGACACCGTGCTGTCCTCCCGGAGA +
Preference number: 6 (lower is better)
Translates to: QMSVRSAFRRNA*TTSDTVLSSRR
Trigger: TCTCCGGGAGGACAGCACGGTGTCGCTGGTCGTGCAGGCGTTGCGCCGGAACGCGGAGCGCACGGACATCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 72 bp GGGCTGTGCAGGTACGGCAGGTTACTGGGGGCCGCGTaGACGCCCACAGACACAGGGAAGCTGAAGACGAAC +
Preference number: 6 (lower is better)
Translates to: GLCRYGRLLGAA*TPTDTGKLKTN
Trigger: GTTCGTCTTCAGCTTCCCTGTGTCTGTGGGCGTGCACGCGGCCCCCAGTAACCTGCCGTACCTGCACAGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS TCA 72 bp CGCCGCCGCCGTTCTCATCCCGGTTCATCAGCCTTTTaGGCACGCTGCAGTCCATCTCCCGCAGTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: RRRRSHPGSSAF*ARCSPSPAVPP
Trigger: TGGAGGAACTGCGGGAGATGGACTGCAGCGTGCTCAAAAGGCTGATGAACCGGGATGAGAACGGCGGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS CCA 72 bp GTCCAAGGACTCATTGGTGCTGGGAGGTACAGGGGGTaGGATGGCGGCCAGGGCCTTGGTTTTAGAGCAGAA +
Preference number: 6 (lower is better)
Translates to: VQGLIGAGRYRG*DGGQGLGFRAE
Trigger: TTCTGCTCTAAAACCAAGGCCCTGGCCGCCATCCCACCCCCTGTACCTCCCAGCACCAATGAGTCCTTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5
CDS GCA 72 bp GCAGTGAACCAGCACTCGCCCTCGACAGTCCTTTACTaGGTCGATGTACTCGATGGCTTCCATGAACCAGGA +
Preference number: 6 (lower is better)
Translates to: AVNQHSPSTVLY*VDVLDGFHEPG
Trigger: TCCTGGTTCATGGAAGCCATCGAGTACATCGACGCAGTAAAGGACTGTCGAGGGCGAGTGCTGGTTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033930.5