Pregenerated sensors for DUSP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003518Ensembl transcript IDs: ENSMUST00000003612.13, ENSMUST00000107172.8, ENSMUST00000107173.9, ENSMUST00000125794.2, ENSMUST00000143177.2, ENSMUST00000151678.8, ENSMUST00000176261.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGGTGGGGGAGGGGTCATGAAGAGTGCCCGTGTCCCGGGCCATaGACCCTGATAGCCCTCCCACCCTGGGTCACTGAGATGTATCTA | + |
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Preference number: 1 (lower is better) Translates to: PRWGRGHEECPCPGP*TLIALPPWVTEMYL Trigger: TAGATACATCTCAGTGACCCAGGGTGGGAGGGCTATCAGGGTGCATGGCCCGGGACACGGGCACTCTTCATGACCCCTCCCCCACCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR CCA 90 bp | CTGCCTCAGCAGGGCGTGTCGGGCTGTGAGGACCAGGAACAGACATaGGGAGGTCAGGGCCTGTGTTTGCATAGTTCCTTTACCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LPQQGVSGCEDQEQT*GGQGLCLHSSFTRL Trigger: GAGCCTGGTAAAGGAACTATGCAAACACAGGCCCTGACCTCCCCATGTCTGTTCCTGGTCCTCACAGCCCGACACGCCCTGCTGAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | TCTGGTGGTGCAGGGAGTGGGTATACTGTGTTTCCTAAACATGGCTaGCAGGGCCCTCCCAGTCAGACCTCTGCAAAAGAGGCTGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: SGGAGSGYTVFPKHG*QGPPSQTSAKEAVG Trigger: GCCCACAGCCTCTTTTGCAGAGGTCTGACTGGGAGGGCCCTGGCAGCCATGTTTAGGAAACACAGTATACCCACTCCCTGCACCACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR CCA 90 bp | CTGCAAACTCCTGTAAGACATCCTACAGGCAGGCAACCAGGCTGCTaGGATCCGGGTGCCCCACGACAACAACTCTCTCTATACACGGGG | + |
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Preference number: 1 (lower is better) Translates to: LQTPVRHPTGRQPGC*DPGAPRQQLSLYTG Trigger: CCCCGTGTATAGAGAGAGTTGTTGTCGTGGGGCACCCGGATCCCAGCAGCCTGGTTGCCTGCCTGTAGGATGTCTTACAGGAGTTTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR TCA 90 bp | ACCGTAGCCCTGGCTGGAGTCTCGATACGTAGACCATGCTATCCTTaGCCTTTCGGCGGTCTTCCTGTCTCTGCCTCTCATGAACTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TVALAGVSIRRPCYP*PFGGLPVSASHELG Trigger: GCCCAGTTCATGAGAGGCAGAGACAGGAAGACCGCCGAAAGGTCAAGGATAGCATGGTCTACGTATCGAGACTCCAGCCAGGGCTACGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR CCA 90 bp | GTCAGGGCCTGTGTTTGCATAGTTCCTTTACCAGGCTCGTGGTTCTaGACCACACAGGAAGAACCCAGGTGGGGGAGGGGTCATGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VRACVCIVPLPGSWF*TTQEEPRWGRGHEE Trigger: CTCTTCATGACCCCTCCCCCACCTGGGTTCTTCCTGTGTGGTCCAGAACCACGAGCCTGGTAAAGGAACTATGCAAACACAGGCCCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR TCA 90 bp | GCACAGCTCTGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTaGCATCCTAAGACAGGTCTGCTTCTCCTGCCTCTTGCAGCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: AQLCSCCDQRSLPWE*HPKTGLLLLPLAAA Trigger: AGCTGCTGCAAGAGGCAGGAGAAGCAGACCTGTCTTAGGATGTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCAGAGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | GCTGTGAGGACCAGGAACAGACATGGGGAGGTCAGGGCCTGTGTTTaGATAGTTCCTTTACCAGGCTCGTGGTTCTGGACCACACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: AVRTRNRHGEVRACV*IVPLPGSWFWTTQE Trigger: TTCCTGTGTGGTCCAGAACCACGAGCCTGGTAAAGGAACTATGCAAACACAGGCCCTGACCTCCCCATGTCTGTTCCTGGTCCTCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | TGTAAGACATCCTACAGGCAGGCAACCAGGCTGCTGGGATCCGGGTaGCCCACGACAACAACTCTCTCTATACACGGGGTACTCAAACAG | + |
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Preference number: 1 (lower is better) Translates to: CKTSYRQATRLLGSG*PTTTTLSIHGVLKQ Trigger: CTGTTTGAGTACCCCGTGTATAGAGAGAGTTGTTGTCGTGGGGCACCCGGATCCCAGCAGCCTGGTTGCCTGCCTGTAGGATGTCTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | TGCACCCTGATAGCCCTCCCACCCTGGGTCACTGAGATGTATCTATaGCACAGACAGGGACATAAACCTGAACCTCACCTCAGGGAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: CTLIALPPWVTEMYL*HRQGHKPEPHLRER Trigger: TCTCTCCCTGAGGTGAGGTTCAGGTTTATGTCCCTGTCTGTGGCATAGATACATCTCAGTGACCCAGGGTGGGAGGGCTATCAGGGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | AAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTaGCCCCTGCTGGCCATGGCATTATCCACACCCACTTGGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: KYYKQLKVERHPPQQ*PLLAMALSTPTWGW Trigger: CCACCCCCAAGTGGGTGTGGATAATGCCATGGCCAGCAGGGGGCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | GGTCTTTACCCTGGGAGTGACATCCTAAGACAGGTCTGCTTCTCCTaGCTCTTGCAGCAGCTCTGGAAAAGGCATGTTCCTTACCTTAAC | + |
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Preference number: 1 (lower is better) Translates to: GLYPGSDILRQVCFS*LLQQLWKRHVPYLN Trigger: GTTAAGGTAAGGAACATGCCTTTTCCAGAGCTGCTGCAAGAGGCAGGAGAAGCAGACCTGTCTTAGGATGTCACTCCCAGGGTAAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | GCGGTCTTCCTGTCTCTGCCTCTCATGAACTGGGCCTGTAGACATTaGAATCATGCCTGGCTAGCCCAGATGTTTTTGGTTTGTGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: AVFLSLPLMNWACRH*NHAWLAQMFLVCGV Trigger: AACACCACAAACCAAAAACATCTGGGCTAGCCAGGCATGATTGCAATGTCTACAGGCCCAGTTCATGAGAGGCAGAGACAGGAAGACCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR TCA 90 bp | GGCAGATTTCAGGTCCAAGCCAAGAACAGCCTCAAGCAGCAGGCCTaGGACTGCTTCTACTTAGCTTTAACGAGCTGGCAACTCTTAATT | + |
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Preference number: 1 (lower is better) Translates to: GRFQVQAKNSLKQQA*DCFYLALTSWQLLI Trigger: AATTAAGAGTTGCCAGCTCGTTAAAGCTAAGTAGAAGCAGTCTCAGGCCTGCTGCTTGAGGCTGTTCTTGGCTTGGACCTGAAATCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | AATAGGCTGGACTTTACACCCTGTATTCTGAAAAGGGGGAAACCCTaGCCAAGGCATCGCTCTTCTAACAAGCAAAGGAACAGAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: NRLDFTPCILKRGKP*PRHRSSNKQRNRAI Trigger: GATGGCTCTGTTCCTTTGCTTGTTAGAAGAGCGATGCCTTGGGCAGGGTTTCCCCCTTTTCAGAATACAGGGTGTAAAGTCCAGCCTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | AGCCACAATTTTCACTTCCTTCTCTGGAGATGGCTCAAAGTCATGTaGACTTGGACACTGTTGGGGGCAGATTTCAGGTCCAAGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: SHNFHFLLWRWLKVM*TWTLLGADFRSKPR Trigger: TCTTGGCTTGGACCTGAAATCTGCCCCCAACAGTGTCCAAGTGCACATGACTTTGAGCCATCTCCAGAGAAGGAAGTGAAAATTGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR GCA 90 bp | CTTAGTATGGGCCAAGAGTTCCCTCATTTGGTAAGTGTTAGTCTGTaGTCTCAAGACAATAGAACAGCAAAGAAACAGACCTACCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSMGQEFPHLVSVSL*SQDNRTAKKQTYPW Trigger: CCAGGGGTAGGTCTGTTTCTTTGCTGTTCTATTGTCTTGAGAGCACAGACTAACACTTACCAAATGAGGGAACTCTTGGCCCATACTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR CCA 90 bp | TTGATTAAAACATTTAGCATCTTAAATACTATAAGCAACTTAAGGTaGAAAGGCACCCGCCTCAACAGTGCCCCCTGCTGGCCATGGCAT | + |
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Preference number: 1 (lower is better) Translates to: LIKTFSILNTISNLR*KGTRLNSAPCWPWH Trigger: ATGCCATGGCCAGCAGGGGGCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATGCTAAATGTTTTAATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR CCA 90 bp | CAGTGTTATTTTGAAATGCACATTGTATTGAGCAAGAGAGCCGCTTaGAAACTAAAGACTGAGGTACACAACTTGGCTATGGTCACTTCA | + |
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Preference number: 1 (lower is better) Translates to: QCYFEMHIVLSKRAA*KLKTEVHNLAMVTS Trigger: TGAAGTGACCATAGCCAAGTTGTGTACCTCAGTCTTTAGTTTCCAAGCGGCTCTCTTGCTCAATACAATGTGCATTTCAAAATAACACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR TCA 90 bp | CAGCTCTGGAAAAGGCATGTTCCTTACCTTAACCATGAACACTGCTaGGTCTTACACTTAAAGCTGAATTTGAAATATTCAACAAAAATC | + |
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Preference number: 1 (lower is better) Translates to: QLWKRHVPYLNHEHC*VLHLKLNLKYSTKI Trigger: GATTTTTGTTGAATATTTCAAATTCAGCTTTAAGTGTAAGACTCAGCAGTGTTCATGGTTAAGGTAAGGAACATGCCTTTTCCAGAGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCACAGCTCTGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTGACCCTGCACAGACACCGTaGAACCAGCAGAGCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: RLHSSAPAVIRGLYPGSDPAQTP*NQQSLP Trigger: CGGGAGGCTCTGCTGGTTCCACGGTGTCTGTGCAGG...GTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCAGAGCTGTGCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCACAGCTCTGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTGACAGAGTGGGACAGATGTaGGCACGTGTCTGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RLHSSAPAVIRGLYPGSDRVGQM*ARVWWC Trigger: GCACCACCAGACACGTGCCCACATCTGTCCCACTCT...GTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCAGAGCTGTGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCACAGCTCTGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTGACCAGGAAGAACCCAGGTaGGGGAGGGGTCATGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: RLHSSAPAVIRGLYPGSDQEEPR*GRGHEE Trigger: CTCTTCATGACCCCTCCCCCACCTGGGTTCTTCCTG...GTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCAGAGCTGTGCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR CAA 90 bp | GGCTGTGAGGACCAGGAACAGACATGGGGAGGTCAGGGCCTGTGTTaGCATAGTTCCTTTACCAGGCTCGTGGTTCTGGACCACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GCEDQEQTWGGQGLC*HSSFTRLVVLDHTG Trigger: TCCTGTGTGGTCCAGAACCACGAGCCTGGTAAAGGAACTATGCAAACACAGGCCCTGACCTCCCCATGTCTGTTCCTGGTCCTCACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCCAGGCTGCACAGCTCTaGTCCTGCTGTGATCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPQAAQL*SCCDQR Trigger: CCTCTGATCACAGCAGGAGCAGAGCTGTGCAGCCTG...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGACAGGCACCCCTTCCAACATATGCACCCGTGCACACACCCACGGACAATAGCCCTCCCACCCTaGGTCACTGAGATGTATCTA | + |
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Preference number: 2 (lower is better) Translates to: QGDRHPFQHMHPCTHPRTIALPP*VTEMYL Trigger: TAGATACATCTCAGTGACCCAGGGTGGGAGGGCTAT...TGTCCGTGGGTGTGTGCACGGGTGCATATGTTGGAAGGGGTGCCTGTCCCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCCAGGAAGAACCCAGGTaGGGGAGGGGTCATGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPQEEPR*GRGHEE Trigger: CTCTTCATGACCCCTCCCCCACCTGGGTTCTTCCTG...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCACTTGGGGGTGGCGGGTGTGCTAAAGGCCAAGTGAGAATTCTTAAAATAGGGCGTGTCGGGCTGTaGGGACCAGGAACAGACATG | + |
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Preference number: 2 (lower is better) Translates to: HPLGGGGCAKGQVRILKIGRVGL*GPGTDM Trigger: CATGTCTGTTCCTGGTCCTCACAGCCCGACACGCCC...TATTTTAAGAATTCTCACTTGGCCTTTAGCACACCCGCCACCCCCAAGTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCCAGAATAGGGGACAATaGCCATCCAGGCTGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPQNRGQ*PSRLHS Trigger: GCTGTGCAGCCTGGATGGTCATTGTCCCCTATTCTG...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCGGGAGCTTCTTCATGTaGTCCCTAAGGGTGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPGSFFM*SLRVEW Trigger: CCACTCCACCCTTAGGGAGCACATGAAGAAGCTCCC...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTCCAGTAGGTGCTAGTGACTGTCCTGTGGCTGTCCTATGGGGTGACCAAATGTGGGCACGTGTCTaGTGGTGCAGGGAGTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: RFPVGASDCPVAVLWGDQMWARV*WCREWV Trigger: TACCCACTCCCTGCACCACCAGACACGTGCCCACAT...TTGGTCACCCCATAGGACAGCCACAGGACAGTCACTAGCACCTACTGGAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | CACCCACTTGGGGGTGGCGGGTGTGCTAAAGGCCAAGTGAGAATTCTTAAAATACCTGCACAGACACCGTaGAACCAGCAGAGCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: HPLGGGGCAKGQVRILKIPAQTP*NQQSLP Trigger: CGGGAGGCTCTGCTGGTTCCACGGTGTCTGTGCAGG...TATTTTAAGAATTCTCACTTGGCCTTTAGCACACCCGCCACCCCCAAGTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAATCCAAAACCTAGGATCTTGGGACCGTAGCCCTGGCTGGAGTCTCGATCGTAAATGGCCAGGGTaGGCAGAGGGGCCTTTCATT | + |
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Preference number: 2 (lower is better) Translates to: PKIQNLGSWDRSPGWSLDRKWPG*AEGPFI Trigger: AATGAAAGGCCCCTCTGCTCACCCTGGCCATTTACG...ATCGAGACTCCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTGGATTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAATCCAAAACCTAGGATCTTGGGACCGTAGCCCTGGCTGGAGTCTCGATCCCACGGACATGAGCTaGAATTGGCTAGGTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PKIQNLGSWDRSPGWSLDPTDMS*NWLGSS Trigger: GGAGGAACCTAGCCAATTGCAGCTCATGTCCGTGGG...ATCGAGACTCCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTGGATTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTCCAGTAGGTGCTAGTGACTGTCCTGTGGCTGTCCTATGGGGTGACCAACAAAACCTAGGATCTTaGGACCGTAGCCCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RFPVGASDCPVAVLWGDQQNLGS*DRSPGW Trigger: CCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTG...TTGGTCACCCCATAGGACAGCCACAGGACAGTCACTAGCACCTACTGGAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCACCATGTGTTACCTAGACAAAGAGAGACTGTGTCCCAATCGACTGGGGCAGGTCTGCTTCTCCTaGCTCTTGCAGCAGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: CVTMCYLDKERLCPNRLGQVCFS*LLQQLW Trigger: CCAGAGCTGCTGCAAGAGGCAGGAGAAGCAGACCTG...CCCCAGTCGATTGGGACACAGTCTCTCTTTGTCTAGGTAACACATGGTGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCACAGCTCTGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTGACAGCCTCTGGGAAAAATaGATTTGCTTACCCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RLHSSAPAVIRGLYPGSDSLWEK*ICLPKG Trigger: GCCCTTGGGTAAGCAAATCCATTTTTCCCAGAGGCT...GTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCAGAGCTGTGCAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | TTACCTAGACAAAGAGAGACTGTGTCCCAATCGACTGGGGAGCCACAATTTTCACCTGCACAGACACCGTaGAACCAGCAGAGCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: LPRQRETVSQSTGEPQFSPAQTP*NQQSLP Trigger: CGGGAGGCTCTGCTGGTTCCACGGTGTCTGTGCAGG...TGAAAATTGTGGCTCCCCAGTCGATTGGGACACAGTCTCTCTTTGTCTAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCAACCCACCCTCAGAGTaGAGAGTTCAATGCTATGTG | + |
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Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPNPPSE*RVQCYV Trigger: CACATAGCATTGAACTCTCCACTCTGAGGGTGGGTT...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCACTTGGGGGTGGCGGGTGTGCTAAAGGCCAAGTGAGAATTCTTAAAATACCTCAGGGAAGGCTCTaGAGCAGCAGATATAGATCG | + |
|
Preference number: 2 (lower is better) Translates to: HPLGGGGCAKGQVRILKIPQGRL*SSRYRS Trigger: CGATCTATATCTGCTGCTTCAGAGCCTTCCCTGAGG...TATTTTAAGAATTCTCACTTGGCCTTTAGCACACCCGCCACCCCCAAGTGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTGCACAGCTCTGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTGACAACCATGAACACTGCTaGGTCTTACACTTAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RLHSSAPAVIRGLYPGSDNHEHC*VLHLKL Trigger: CAGCTTTAAGTGTAAGACTCAGCAGTGTTCATGGTT...GTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCAGAGCTGTGCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTAGACAAAGAGAGACTGTGTCCCAATCGACTGGGGAGCCACAATTTTCAATGTGGGCACGTGTCTaGTGGTGCAGGGAGTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LPRQRETVSQSTGEPQFSMWARV*WCREWV Trigger: TACCCACTCCCTGCACCACCAGACACGTGCCCACAT...TGAAAATTGTGGCTCCCCAGTCGATTGGGACACAGTCTCTCTTTGTCTAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACCTAGACAAAGAGAGACTGTGTCCCAATCGACTGGGGAGCCACAATTTTCAAATGACCATCCAGGCTaGACAGCTCTGCTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LPRQRETVSQSTGEPQFSNDHPG*TALLLL Trigger: CAGCAGGAGCAGAGCTGTGCAGCCTGGATGGTCATT...TGAAAATTGTGGCTCCCCAGTCGATTGGGACACAGTCTCTCTTTGTCTAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCTTTCACTTCCTTCTCTaGAGATGGCTCAAAGTCATG | + |
|
Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPFHFLL*RWLKVM Trigger: CATGACTTTGAGCCATCTCCAGAGAAGGAAGTGAAA...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCACTGAGATGTATCTATaGCACAGACAGGGACATAAA | + |
|
Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPTEMYL*HRQGHK Trigger: TTTATGTCCCTGTCTGTGGCATAGATACATCTCAGT...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGGGGAAACCCTGCCCAAGGCATCGCTCTTCTAACAAGCAAAGGAACAGAGTGGGAAAAATGGATTTaGTTACCCAAGGGCCCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: KGGNPAQGIALLTSKGTEWEKWI*LPKGPY Trigger: ATAGGGGCCCTTGGGTAAGCAAATCCATTTTTCCCA...CTCTGTTCCTTTGCTTGTTAGAAGAGCGATGCCTTGGGCAGGGTTTCCCCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCCCCACGGACATGAGCTaGAATTGGCTAGGTTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: HLKYYKQLKVERHPPQQCPTDMS*NWLGSS Trigger: GGAGGAACCTAGCCAATTGCAGCTCATGTCCGTGGG...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCAATGACCATCCAGGCTaGACAGCTCTGCTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLKYYKQLKVERHPPQQCNDHPG*TALLLL Trigger: CAGCAGGAGCAGAGCTGTGCAGCCTGGATGGTCATT...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGATAGCCCTCCCACCCTGGGTCACTGAGATGTATCTATGCCACAGACAGAATTACAGGAAAGGATaGCTAAGGAGCAGAACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TLIALPPWVTEMYLCHRQNYRKG*LRSRTS Trigger: AGAAGTTCTGCTCCTTAGCCATCCTTTCCTGTAATT...CTGTCTGTGGCATAGATACATCTCAGTGACCCAGGGTGGGAGGGCTATCAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTCAGGGAAGGCTCTGAAGCAGCAGATATAGATCGTAAGCTCTCTGGCAAGAGCCTCTGGGAAAAATaGATTTGCTTACCCAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ILREGSEAADIDRKLSGKSLWEK*ICLPKG Trigger: GCCCTTGGGTAAGCAAATCCATTTTTCCCAGAGGCT...CTTGCCAGAGAGCTTACGATCTATATCTGCTGCTTCAGAGCCTTCCCTGAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCCACTTGGGGGTGGCGGGTGTGCTAAAGGCCAAGTGAGAATTCTTAAAATACTCTTGCAGCAGCTCTaGAAAAGGCATGTTCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: HPLGGGGCAKGQVRILKILLQQL*KRHVPY Trigger: GTAAGGAACATGCCTTTTCCAGAGCTGCTGCAAGAG...TATTTTAAGAATTCTCACTTGGCCTTTAGCACACCCGCCACCCCCAAGTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCCAAAACCTAGGATCTTaGGACCGTAGCCCTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HLKYYKQLKVERHPPQQCQNLGS*DRSPGW Trigger: CCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTG...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCCTAGTGACTGTCCTGTaGCTGTCCTATGGGGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: HLKYYKQLKVERHPPQQCLVTVL*LSYGVT Trigger: GGTCACCCCATAGGACAGCCACAGGACAGTCACTAG...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTAATGGAAAGCCAGGAATCTCCCAAAGGCTCTTTCTTCATGTTCCCACAAAGATCCTAAGACAGGTCTaGTTCTCCTGCCTCTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PNGKPGISQRLFLHVPTKILRQV*FSCLLQ Trigger: CTGCAAGAGGCAGGAGAAGCAGACCTGTCTTAGGAT...CTTTGTGGGAACATGAAGAAAGAGCCTTTGGGAGATTCCTGGCTTTCCATTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTAATGGAAAGCCAGGAATCTCCCAAAGGCTCTTTCTTCATGTTCCCACAAAGTGGCTCAAAGTCATGTaGACTTGGACACTGTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PNGKPGISQRLFLHVPTKWLKVM*TWTLLG Trigger: CCCCAACAGTGTCCAAGTGCACATGACTTTGAGCCA...CTTTGTGGGAACATGAAGAAAGAGCCTTTGGGAGATTCCTGGCTTTCCATTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCGTAAGTGTTAGTCTGTaGTCTCAAGACAATAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPVSVSL*SQDNRT Trigger: TGTTCTATTGTCTTGAGAGCACAGACTAACACTTAC...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCTTGTTTGTAATAGGCTaGACTTTACACCCTGTATTC | + |
|
Preference number: 2 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPLFVIG*TLHPVF Trigger: GAATACAGGGTGTAAAGTCCAGCCTATTACAAACAA...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAAATCCAAAACCTAGGATCTTGGGACCGTAGCCCTGGCTGGAGTCTCGATCTGGTTCTCATAAAATaGGCTTTTATGAGACGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PKIQNLGSWDRSPGWSLDLVLIK*AFMRRL Trigger: TAGGCGTCTCATAAAAGCCCATTTTATGAGAACCAG...ATCGAGACTCCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTGGATTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTAGACAAAGAGAGACTGTGTCCCAATCGACTGGGGAGCCACAATTTTCACTCTTGCAGCAGCTCTaGAAAAGGCATGTTCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LPRQRETVSQSTGEPQFSLLQQL*KRHVPY Trigger: GTAAGGAACATGCCTTTTCCAGAGCTGCTGCAAGAG...TGAAAATTGTGGCTCCCCAGTCGATTGGGACACAGTCTCTCTTTGTCTAGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCCTCTTGCAGCAGCTCTaGAAAAGGCATGTTCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: HLKYYKQLKVERHPPQQCLLQQL*KRHVPY Trigger: GTAAGGAACATGCCTTTTCCAGAGCTGCTGCAAGAG...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGGGGAAACCCTGCCCAAGGCATCGCTCTTCTAACAAGCAAAGGAACAGAGAATCAAGATAGCCTCTaGGAAAAATGGATTTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: KGGNPAQGIALLTSKGTENQDSL*EKWICL Trigger: TAAGCAAATCCATTTTTCCCAGAGGCTATCTTGATT...CTCTGTTCCTTTGCTTGTTAGAAGAGCGATGCCTTGGGCAGGGTTTCCCCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTAATGGAAAGCCAGGAATCTCCCAAAGGCTCTTTCTTCATGTTCCCACAAAGTTCAACAAAAATCCCTaGTATTTCTTTCCCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PNGKPGISQRLFLHVPTKFNKNP*YFFPSK Trigger: CTTGGAGGGAAAGAAATATCAGGGATTTTTGTTGAA...CTTTGTGGGAACATGAAGAAAGAGCCTTTGGGAGATTCCTGGCTTTCCATTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCTAGACAAAGAGAGACTGTGTCCCAATCGACTGGGGAGCCACAATTTTCATTGTTTGTAATAGGCTaGACTTTACACCCTGTATTC | + |
|
Preference number: 2 (lower is better) Translates to: LPRQRETVSQSTGEPQFSLFVIG*TLHPVF Trigger: GAATACAGGGTGTAAAGTCCAGCCTATTACAAACAA...TGAAAATTGTGGCTCCCCAGTCGATTGGGACACAGTCTCTCTTTGTCTAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCATTATGTTCAATCTCTaGCAAATGTGCACACATACA | + |
|
Preference number: 2 (lower is better) Translates to: HLKYYKQLKVERHPPQQCIMFNL*QMCTHT Trigger: TGTATGTGTGCACATTTGCCAGAGATTGAACATAAT...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CAA 90 bp | AGGATAAAATCCTTGCAATTCTCCAAATGGAGGTCCTTTGTTTGTTaGTTTGTTTGTTTGTTTGTAATAGGCTGGACTTTACACCCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RIKSLQFSKWRSFVC*FVCLFVIGWTLHPV Trigger: TACAGGGTGTAAAGTCCAGCCTATTACAAACAAACAAACAAACAAACAAACAAAGGACCTCCATTTGGAGAATTGCAAGGATTTTATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CAA 90 bp | ATTCAGGATAAAATCCTTGCAATTCTCCAAATGGAGGTCCTTTGTTaGTTTGTTTGTTTGTTTGTTTGTAATAGGCTGGACTTTACACCC | + |
|
Preference number: 2 (lower is better) Translates to: IQDKILAILQMEVLC*FVCLFVCNRLDFTP Trigger: GGGTGTAAAGTCCAGCCTATTACAAACAAACAAACAAACAAACAAACAAAGGACCTCCATTTGGAGAATTGCAAGGATTTTATCCTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | GGGAGGGGTCATGAAGAGTGCCCGTGTCCCGGGCCATaGACCCTGATAGCCCTCCCACCCTGGGTCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GRGHEECPCPGP*TLIALPPWVTE Trigger: CTCAGTGACCCAGGGTGGGAGGGCTATCAGGGTGCATGGCCCGGGACACGGGCACTCTTCATGACCCCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | GGCTCGTGGTTCTGGACCACACAGGAAGAACCCAGGTaGGGGAGGGGTCATGAAGAGTGCCCGTGTCCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSWFWTTQEEPR*GRGHEECPCPG Trigger: CCCGGGACACGGGCACTCTTCATGACCCCTCCCCCACCTGGGTTCTTCCTGTGTGGTCCAGAACCACGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | GTGGAGTGGCCCCCGAGGACCAGAGTGGGACAGATGTaGGCACGTGTCTGGTGGTGCAGGGAGTGGGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: VEWPPRTRVGQM*ARVWWCREWVY Trigger: GTATACCCACTCCCTGCACCACCAGACACGTGCCCACATCTGTCCCACTCTGGTCCTCGGGGGCCACTCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR TCA 72 bp | TGTCATTCGTCTGCCTCAGCAGGGCGTGTCGGGCTGTaGGGACCAGGAACAGACATGGGGAGGTCAGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CHSSASAGRVGL*GPGTDMGRSGP Trigger: AGGCCCTGACCTCCCCATGTCTGTTCCTGGTCCTCACAGCCCGACACGCCCTGCTGAGGCAGACGAATGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | TCCTACAGGCAGGCAACCAGGCTGCTGGGATCCGGGTaGCCCACGACAACAACTCTCTCTATACACGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SYRQATRLLGSG*PTTTTLSIHGV Trigger: TACCCCGTGTATAGAGAGAGTTGTTGTCGTGGGGCACCCGGATCCCAGCAGCCTGGTTGCCTGCCTGTAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | TTAAGGTGGAAAGGCACCCGCCTCAACAGTGCCCCCTaGTGGCCATGGCATTATCCACACCCACTTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LRWKGTRLNSAP*WPWHYPHPLGG Trigger: ACCCCCAAGTGGGTGTGGATAATGCCATGGCCAGCAGGGGGCACTGTTGAGGCGGGTGCCTTTCCACCTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | TGTCCCGGGCCATGCACCCTGATAGCCCTCCCACCCTaGGTCACTGAGATGTATCTATGCCACAGACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CPGPCTLIALPP*VTEMYLCHRQG Trigger: TCCCTGTCTGTGGCATAGATACATCTCAGTGACCCAGGGTGGGAGGGCTATCAGGGTGCATGGCCCGGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | CAGGGCGTGTCGGGCTGTGAGGACCAGGAACAGACATaGGGAGGTCAGGGCCTGTGTTTGCATAGTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QGVSGCEDQEQT*GGQGLCLHSSF Trigger: AAAGGAACTATGCAAACACAGGCCCTGACCTCCCCATGTCTGTTCCTGGTCCTCACAGCCCGACACGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | CCTGTAAGACATCCTACAGGCAGGCAACCAGGCTGCTaGGATCCGGGTGCCCCACGACAACAACTCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PVRHPTGRQPGC*DPGAPRQQLSL Trigger: TAGAGAGAGTTGTTGTCGTGGGGCACCCGGATCCCAGCAGCCTGGTTGCCTGCCTGTAGGATGTCTTACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | GCTAAGGAGCAGAACTTCTTAGGGAGCTTCTTCATGTaGTCCCTAAGGGTGGAGTGGCCCCCGAGGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AKEQNFLGSFFM*SLRVEWPPRTR Trigger: TCTGGTCCTCGGGGGCCACTCCACCCTTAGGGAGCACATGAAGAAGCTCCCTAAGAAGTTCTGCTCCTTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | AAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTaGCCCCTGCTGGCCATGGCATTATCCACACCCACT | + |
|
Preference number: 3 (lower is better) Translates to: KQLKVERHPPQQ*PLLAMALSTPT Trigger: AGTGGGTGTGGATAATGCCATGGCCAGCAGGGGGCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | AGGGCCTGTGTTTGCATAGTTCCTTTACCAGGCTCGTaGTTCTGGACCACACAGGAAGAACCCAGGTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RACVCIVPLPGS*FWTTQEEPRWG Trigger: CCCCCACCTGGGTTCTTCCTGTGTGGTCCAGAACCACGAGCCTGGTAAAGGAACTATGCAAACACAGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACCAGCAGAGCCTCCCGTAAATGGCCAGGGTGAGCAGAGGGGCCTTTCATTTGGTCAGGGCCTGTGTTaGCATAGTTCCTTTACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EPAEPPVNGQGEQRGLSFGQGLC*HSSFTR Trigger: CCTGGTAAAGGAACTATGCAAACACAGGCCCTGACC...AAATGAAAGGCCCCTCTGCTCACCCTGGCCATTTACGGGAGGCTCTGCTGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | GCAGGGAGTGGGTATACTGTGTTTCCTAAACATGGCTaGCAGGGCCCTCCCAGTCAGACCTCTGCAAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGSGYTVFPKHG*QGPPSQTSAKE Trigger: CTCTTTTGCAGAGGTCTGACTGGGAGGGCCCTGGCAGCCATGTTTAGGAAACACAGTATACCCACTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | CTTTCGGCGGTCTTCCTGTCTCTGCCTCTCATGAACTaGGCCTGTAGACATTGCAATCATGCCTGGCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSAVFLSLPLMN*ACRHCNHAWLA Trigger: GGCTAGCCAGGCATGATTGCAATGTCTACAGGCCCAGTTCATGAGAGGCAGAGACAGGAAGACCGCCGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | CCTGGGAGTGACATCCTAAGACAGGTCTGCTTCTCCTaGCTCTTGCAGCAGCTCTGGAAAAGGCATGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGSDILRQVCFS*LLQQLWKRHVP Trigger: AGGAACATGCCTTTTCCAGAGCTGCTGCAAGAGGCAGGAGAAGCAGACCTGTCTTAGGATGTCACTCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | CAGAAGAGGCAGGGGGAGGGAAACCCACCCTCAGAGTaGAGAGTTCAATGCTATGTGTCACCATGTGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: QKRQGEGNPPSE*RVQCYVSPCVT Trigger: GGTAACACATGGTGACACATAGCATTGAACTCTCCACTCTGAGGGTGGGTTTCCCTCCCCCTGCCTCTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGTAGACTAGAGGCTAAACTTTCCTTTTCCTCCCGGATGGCAGGACCTCCCCTGGGAAAAATGGATTaGCTTACCCAAGGGCCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GGRLEAKLSFSSRMAGPPLGKMD*LTQGPL Trigger: TAGGGGCCCTTGGGTAAGCAAATCCATTTTTCCCAG...GGGAGGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTCCAGTAGGTGCTAGTGACTGTCCTGTGGCTGTCCTATGGGGTGACCAAGGCAGATCTCTAAGTTaGAGGCCAGCCTGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: RFPVGASDCPVAVLWGDQGRSLS*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAAACTTAGAGATCTGCC...TTGGTCACCCCATAGGACAGCCACAGGACAGTCACTAGCACCTACTGGAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR TCA 72 bp | TGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTaGCATCCTAAGACAGGTCTGCTTCTCCTGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CSCCDQRSLPWE*HPKTGLLLLPL Trigger: AAGAGGCAGGAGAAGCAGACCTGTCTTAGGATGTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR TCA 72 bp | CAGGTCCAAGCCAAGAACAGCCTCAAGCAGCAGGCCTaGGACTGCTTCTACTTAGCTTTAACGAGCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QVQAKNSLKQQA*DCFYLALTSWQ Trigger: TTGCCAGCTCGTTAAAGCTAAGTAGAAGCAGTCTCAGGCCTGCTGCTTGAGGCTGTTCTTGGCTTGGACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | ATAGCCCTCCCACCCTGGGTCACTGAGATGTATCTATaGCACAGACAGGGACATAAACCTGAACCTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: IALPPWVTEMYL*HRQGHKPEPHL Trigger: GAGGTGAGGTTCAGGTTTATGTCCCTGTCTGTGGCATAGATACATCTCAGTGACCCAGGGTGGGAGGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | TTCCTTCTCTGGAGATGGCTCAAAGTCATGTGCACTTaGACACTGTTGGGGGCAGATTTCAGGTCCAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLLWRWLKVMCT*TLLGADFRSKP Trigger: TGGCTTGGACCTGAAATCTGCCCCCAACAGTGTCCAAGTGCACATGACTTTGAGCCATCTCCAGAGAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTCCAGTAGGTGCTAGTGACTGTCCTGTGGCTGTCCTATGGGGTGACCAAAGGCTGTTTCTTTCTTaGCTCTCTCTCTCTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: RFPVGASDCPVAVLWGDQRLFLS*LSLSPF Trigger: GAATGGAGAGAGAGAGAGCAAAGAAAGAAACAGCCT...TTGGTCACCCCATAGGACAGCCACAGGACAGTCACTAGCACCTACTGGAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | TTTCACTTCCTTCTCTGGAGATGGCTCAAAGTCATGTaGACTTGGACACTGTTGGGGGCAGATTTCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: FHFLLWRWLKVM*TWTLLGADFRS Trigger: GGACCTGAAATCTGCCCCCAACAGTGTCCAAGTGCACATGACTTTGAGCCATCTCCAGAGAAGGAAGTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAATGGAAAGCCAGGAATCTCCCAAAGGCTCTTTCTTCATGTTCCCACAAAGGGCAGATCTCTAAGTTaGAGGCCAGCCTGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: PNGKPGISQRLFLHVPTKGRSLS*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAAACTTAGAGATCTGCC...CTTTGTGGGAACATGAAGAAAGAGCCTTTGGGAGATTCCTGGCTTTCCATTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | AATCGACTGGGGAGCCACAATTTTCACTTCCTTCTCTaGAGATGGCTCAAAGTCATGTGCACTTGGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: NRLGSHNFHFLL*RWLKVMCTWTL Trigger: CAGTGTCCAAGTGCACATGACTTTGAGCCATCTCCAGAGAAGGAAGTGAAAATTGTGGCTCCCCAGTCGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAATGGAAAGCCAGGAATCTCCCAAAGGCTCTTTCTTCATGTTCCCACAAAGCTGGGAAAAATGGATTaGCTTACCCAAGGGCCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PNGKPGISQRLFLHVPTKLGKMD*LTQGPL Trigger: TAGGGGCCCTTGGGTAAGCAAATCCATTTTTCCCAG...CTTTGTGGGAACATGAAGAAAGAGCCTTTGGGAGATTCCTGGCTTTCCATTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAAATCCAAAACCTAGGATCTTGGGACCGTAGCCCTGGCTGGAGTCTCGATTTCAGGATAAAATCCTaGCAATTCTCCAAATGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PKIQNLGSWDRSPGWSLDFRIKS*QFSKWR Trigger: CCTCCATTTGGAGAATTGCAAGGATTTTATCCTGAA...ATCGAGACTCCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTGGATTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR TCA 72 bp | TTGTTTGTAATAGGCTGGACTTTACACCCTGTATTCTaGAAAGGGGGAAACCCTGCCCAAGGCATCGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LFVIGWTLHPVF*KGGNPAQGIAL Trigger: AAGAGCGATGCCTTGGGCAGGGTTTCCCCCTTTTCAGAATACAGGGTGTAAAGTCCAGCCTATTACAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | ACATTTAGCATCTTAAATACTATAAGCAACTTAAGGTaGAAAGGCACCCGCCTCAACAGTGCCCCCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TFSILNTISNLR*KGTRLNSAPCW Trigger: CCAGCAGGGGGCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATGCTAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCAAGGCACACTTTAAACATTCCAAAGAATCAAGATAGCCTCTGGGAAAAAGGTCAGGGCCTGTGTTaGCATAGTTCCTTTACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LARHTLNIPKNQDSLWEKGQGLC*HSSFTR Trigger: CCTGGTAAAGGAACTATGCAAACACAGGCCCTGACC...TTTTTCCCAGAGGCTATCTTGATTCTTTGGAATGTTTAAAGTGTGCCTTGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | CAAGACAATAGAACAGCAAAGAAACAGACCTACCCCTaGAAAAGGCAGGCAGACTTTAGAAGATTGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QDNRTAKKQTYP*KRQADFRRLRR Trigger: TCTTCTCAATCTTCTAAAGTCTGCCTGCCTTTTCCAGGGGTAGGTCTGTTTCTTTGCTGTTCTATTGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | CACACTTTAAACATTCCAAAGAATCAAGATAGCCTCTaGGAAAAATGGATTTGCTTACCCAAGGGCCCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: HTLNIPKNQDSL*EKWICLPKGPY Trigger: ATAGGGGCCCTTGGGTAAGCAAATCCATTTTTCCCAGAGGCTATCTTGATTCTTTGGAATGTTTAAAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CCA 72 bp | TTTGAAATGCACATTGTATTGAGCAAGAGAGCCGCTTaGAAACTAAAGACTGAGGTACACAACTTGGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: FEMHIVLSKRAA*KLKTEVHNLAM Trigger: CATAGCCAAGTTGTGTACCTCAGTCTTTAGTTTCCAAGCGGCTCTCTTGCTCAATACAATGTGCATTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR TCA 72 bp | AAAAGGCATGTTCCTTACCTTAACCATGAACACTGCTaGGTCTTACACTTAAAGCTGAATTTGAAATATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KRHVPYLNHEHC*VLHLKLNLKYS Trigger: TGAATATTTCAAATTCAGCTTTAAGTGTAAGACTCAGCAGTGTTCATGGTTAAGGTAAGGAACATGCCTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR GCA 72 bp | ATGGAATACAAGTTAAATATCCAGCTATTCTCTCTATaGTACGATCAGGACAAAGCCTGTAAAAGAATTATG | + |
|
Preference number: 3 (lower is better) Translates to: MEYKLNIQLFSL*YDQDKACKRIM Trigger: CATAATTCTTTTACAGGCTTTGTCCTGATCGTAGCATAGAGAGAATAGCTGGATATTTAACTTGTATTCCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAAATCCAAAACCTAGGATCTTGGGACCGTAGCCCTGGCTGGAGTCTCGATTCGGGACGACCTCGTTaGAGGGCTGGCTCGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKIQNLGSWDRSPGWSLDSGRPR*RAGSAG Trigger: GCCTGCCGAGCCAGCCCTGCAACGAGGTCGTCCCGA...ATCGAGACTCCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTGGATTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTACCAGGCTCGTGGTTCTGGACCACACAGGAAGAACCCAGGTGGGGGACCGAGAGCAGGTCGTTaGGATCTTGCACCGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLYQARGSGPHRKNPGGGPRAGR*DLAPRV Trigger: AACTCTCGGTGCAAGATCTCAACGACCTGCTCTCGG...TCCCCCACCTGGGTTCTTCCTGTGTGGTCCAGAACCACGAGCCTGGTAAAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCACAGCTCTGCTCCTGCTGTGATCAGAGGTCTTTACCCTGGGAGTGACCCGAGAGCAGGTCGTTaGGATCTTGCACCGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLHSSAPAVIRGLYPGSDPRAGR*DLAPRV Trigger: AACTCTCGGTGCAAGATCTCAACGACCTGCTCTCGG...GTCACTCCCAGGGTAAAGACCTCTGATCACAGCAGGAGCAGAGCTGTGCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGATCGGGACGACCTCGTTaGAGGGCTGGCTCGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LANVHTYKVQRGSKTTLRSGRPR*RAGSAG Trigger: GCCTGCCGAGCCAGCCCTGCAACGAGGTCGTCCCGA...TCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR GCA 90 bp | CCCAAAATCCAAAACCTAGGATCTTGGGACCGTAGCCCTGGCTGGAGTCTCGATGCACTGGTGTTGACGTaGATGAAGGACCTGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PKIQNLGSWDRSPGWSLDALVLT*MKDLPS Trigger: CGAGGGCAGGTCCTTCATGCACGTCAACACCAGTGC...ATCGAGACTCCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTGGATTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| 3UTR CAA 72 bp | CAGCCCTCAAAGGCAGAGTCAGGCAGATCTCTAAGTTaGAGGCCAGCCTGGTCTACAGAGCGAGTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPSKAESGRSLS*RPAWSTERVPG Trigger: TCCTGGAACTCGCTCTGTAGACCAGGCTGGCCTCAAACTTAGAGATCTGCCTGACTCTGCCTTTGAGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAGCAGAACTTCTTAGGGAGCTTCTTCATGTGCTCCCTAAGGGTGGAGTGGCCGAGAGCAGGTCGTTaGGATCTTGCACCGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEQNFLGSFFMCSLRVEWPRAGR*DLAPRV Trigger: AACTCTCGGTGCAAGATCTCAACGACCTGCTCTCGG...CCACTCCACCCTTAGGGAGCACATGAAGAAGCTCCCTAAGAAGTTCTGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CCA 90 bp | TTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCAAGAGTTCGAACGAGCTaGACATGGCGGCGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNLWQMCTHTRSSEVQKPRVRTS*TWRRRG Trigger: GCCCCGCCGCCGCCATGTCCAGCTCGTTCGAACTCT...TGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107173.9 |
||
| 3UTR CAA 72 bp | CTTCCTTCTCTGGAGATGGCTCAAAGTCATGTGCACTaGGACACTGTTGGGGGCAGATTTCAGGTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLEMAQSHVH*DTVGGRFQVQA Trigger: GGCTTGGACCTGAAATCTGCCCCCAACAGTGTCCAAGTGCACATGACTTTGAGCCATCTCCAGAGAAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCCAGTAGGTGCTAGTGACTGTCCTGTGGCTGTCCTATGGGGTGACCAAAGGTCGTTGAGATCTTaGACCGAGAGTTCGAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: RFPVGASDCPVAVLWGDQRSLRS*TESSNE Trigger: CTCGTTCGAACTCTCGGTGCAAGATCTCAACGACCT...TTGGTCACCCCATAGGACAGCCACAGGACAGTCACTAGCACCTACTGGAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTGCACTGGTGTTGACGTaGATGAAGGACCTGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLANVHTYKVQRGSKTTLALVLT*MKDLPS Trigger: CGAGGGCAGGTCCTTCATGCACGTCAACACCAGTGC...AAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CCA 90 bp | CACCCACTTGGGGGTGGCGGGTGTGCTAAAGGCCAAGTGAGAATTCTTAAAATATTGAGCTGGCAGAGTTaGGCCAGGAAGCCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPLGGGGCAKGQVRILKILSWQS*ARKPSL Trigger: CAACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAA...TATTTTAAGAATTCTCACTTGGCCTTTAGCACACCCGCCACCCCCAAGTGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGACCAGGAAGCCATCGTTaGGGCCGATCTCACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LANVHTYKVQRGSKTTLRPGSHR*GRSHDS Trigger: AGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGG...TCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | AATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCCCAGGAAGCCATCGTTaGGGCCGATCTCACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLWQMCTHTRSSEVQKPPPGSHR*GRSHDS Trigger: AGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGG...GGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | AATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTGAGCTGGCAGAGTTaGGCCAGGAAGCCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLWQMCTHTRSSEVQKPPLSWQS*ARKPSL Trigger: CAACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAA...GGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGATTGAGCTGGCAGAGTTaGGCCAGGAAGCCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LANVHTYKVQRGSKTTLRLSWQS*ARKPSL Trigger: CAACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAA...TCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTATTGAGCTGGCAGAGTTaGGCCAGGAAGCCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWQMCTHTRSSEVQKPPLLSWQS*ARKPSL Trigger: CAACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAA...TAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR TCA 90 bp | CAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCTACTCAGAGCAGACTTaGCGTCCATCTTCTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLANVHTYKVQRGSKTTYSEQT*RPSSAA Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCTCTGAGTA...GGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | GGATTATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCCCAGGAAGCCATCGTTaGGGCCGATCTCACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLCSISGKCAHIQGPARFPGSHR*GRSHDS Trigger: AGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGG...GAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| 3UTR CAA 72 bp | AGTGACATCCTAAGACAGGTCTGCTTCTCCTGCCTCTaGCAGCAGCTCTGGAAAAGGCATGTTCCTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDILRQVCFSCL*QQLWKRHVPYL Trigger: AAGGTAAGGAACATGCCTTTTCCAGAGCTGCTGCAAGAGGCAGGAGAAGCAGACCTGTCTTAGGATGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR TCA 90 bp | CCTAATGGAAAGCCAGGAATCTCCCAAAGGCTCTTTCTTCATGTTCCCACAAAGTACTCAGAGCAGACTTaGCGTCCATCTTCTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNGKPGISQRLFLHVPTKYSEQT*RPSSAA Trigger: TGCGGCAGAAGATGGACGTCAAGTCTGCTCTGAGTA...CTTTGTGGGAACATGAAGAAAGAGCCTTTGGGAGATTCCTGGCTTTCCATTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | AATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGTTCCCAGGAAGCCATCGTTaGGGCCGATCTCACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVHTYKVQRGSKTTLRKFPGSHR*GRSHDS Trigger: AGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGG...GAACTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCCAGGAAGCCATCGTTaGGGCCGATCTCACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSISGKCAHIQGPARFKNPGSHR*GRSHDS Trigger: AGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGG...GTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | GATTATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCATTGAGCTGGCAGAGTTaGGCCAGGAAGCCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DYVQSLANVHTYKVQRGSLSWQS*ARKPSL Trigger: CAACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAA...TGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | TATGCCACAGACAGGGACATAAACCTGAACCTCACCTCAGGGAGAGACATAAATAGTCTGTCATTGAGCTaGCAGAGTTGGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YATDRDINLNLTSGRDINSLSLS*QSWARK Trigger: CTTCCTGGCCCAACTCTGCCAGCTCAATGACAGACT...ATTTATGTCTCTCCCTGAGGTGAGGTTCAGGTTTATGTCCCTGTCTGTGGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CAA 72 bp | TGCACCCGTGCACACACCCACGGACATGAGCTGCAATaGGCTAGGTTCCTCCTCCTAATTATTCTTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: CTRAHTHGHELQ*ARFLLLIILRI Trigger: TATTCTAAGAATAATTAGGAGGAGGAACCTAGCCAATTGCAGCTCATGTCCGTGGGTGTGTGCACGGGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGAGGTCGTTGAGATCTTaGACCGAGAGTTCGAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANVHTYKVQRGSKTTLRKRSLRS*TESSNE Trigger: CTCGTTCGAACTCTCGGTGCAAGATCTCAACGACCT...CTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGTTCAGTCTGTCATTGAGCTaGCAGAGTTGGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NVHTYKVQRGSKTTLRKFSLSLS*QSWARK Trigger: CTTCCTGGCCCAACTCTGCCAGCTCAATGACAGACT...GAACTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CCA 90 bp | GATTATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAGTCTGTCATTGAGCTaGCAGAGTTGGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DYVQSLANVHTYKVQRGSSLSLS*QSWARK Trigger: CTTCCTGGCCCAACTCTGCCAGCTCAATGACAGACT...TGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR GCA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCAGGTCGTTGAGATCTTaGACCGAGAGTTCGAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLKYYKQLKVERHPPQQCRSLRS*TESSNE Trigger: CTCGTTCGAACTCTCGGTGCAAGATCTCAACGACCT...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCAAGGCACACTTTAAACATTCCAAAGAATCAAGATAGCCTCTGGGAAAAAAGTCTGTCATTGAGCTaGCAGAGTTGGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LARHTLNIPKNQDSLWEKSLSLS*QSWARK Trigger: CTTCCTGGCCCAACTCTGCCAGCTCAATGACAGACT...TTTTTCCCAGAGGCTATCTTGATTCTTTGGAATGTTTAAAGTGTGCCTTGCCAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CAA 72 bp | TCAACTCTACAGTGTTATTTTGAAATGCACATTGTATaGAGCAAGAGAGCCGCTTGGAAACTAAAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: STLQCYFEMHIV*SKRAAWKLKTE Trigger: CTCAGTCTTTAGTTTCCAAGCGGCTCTCTTGCTCAATACAATGTGCATTTCAAAATAACACTGTAGAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CAA 72 bp | TCCTTGCAATTCTCCAAATGGAGGTCCTTTGTTTGTTaGTTTGTTTGTTTGTTTGTAATAGGCTGGACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLQFSKWRSFVC*FVCLFVIGWTL Trigger: TAAAGTCCAGCCTATTACAAACAAACAAACAAACAAACAAACAAAGGACCTCCATTTGGAGAATTGCAAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| 3UTR CAA 72 bp | AAAATCCTTGCAATTCTCCAAATGGAGGTCCTTTGTTaGTTTGTTTGTTTGTTTGTTTGTAATAGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KILAILQMEVLC*FVCLFVCNRLD Trigger: GTCCAGCCTATTACAAACAAACAAACAAACAAACAAACAAAGGACCTCCATTTGGAGAATTGCAAGGATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| CDS GCA 90 bp | GGAGCGGCTGTAGCCCTCGCGGCAATGGACAAGCACCCGGCGCGTTaGCCACGTAGACCCTCGGGACGACCTCGTTGCAGGGCTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GAAVALAAMDKHPAR*PRRPSGRPRCRAGS Trigger: CGAGCCAGCCCTGCAACGAGGTCGTCCCGAGGGTCTACGTGGGCAACGCGCCGGGTGCTTGTCCATTGCCGCGAGGGCTACAGCCGCTCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143177.2 |
||
| CDS-3UTR CAA 90 bp | GAACCAGCAGAGCCTCCCGTAAATGGCCAGGGTGAGCAGAGGGGCCTTTCATTTCTCGGGACGACCTCGTaGCAGGGCTGGCTCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EPAEPPVNGQGEQRGLSFLGTTS*QGWLGR Trigger: CCTGCCGAGCCAGCCCTGCAACGAGGTCGTCCCGAG...AAATGAAAGGCCCCTCTGCTCACCCTGGCCATTTACGGGAGGCTCTGCTGGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS GCA 90 bp | CAGAGTTGGGCCAGGAAGCCATCGTTGGGGCCGATCTCACGATTCTaGCTCACAGTACTCAGAGCAGACTTGACGTCCATCTTCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QSWARKPSLGPISRF*LTVLRADLTSIFCR Trigger: GCGGCAGAAGATGGACGTCAAGTCTGCTCTGAGTACTGTGAGGCAGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGCCCAACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGGGACAGGCACCCCTTCCAACATATGCACCCGTGCACACACCCACGGACACAGGTCGTTGAGATCTaGCACCGAGAGTTCGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: QGDRHPFQHMHPCTHPRTQVVEI*HREFER Trigger: TCGTTCGAACTCTCGGTGCAAGATCTCAACGACCTG...TGTCCGTGGGTGTGTGCACGGGTGCATATGTTGGAAGGGGTGCCTGTCCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS TCA 90 bp | GCACCGAGAGTTCGAACGAGCTGGACATGGCGGCGGCGGGGCGCTTaGCCGAATCATAACACAGAGAATATAAATACCGGATTGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: APRVRTSWTWRRRGA*PNHNTENINTGLSR Trigger: GCGGGACAATCCGGTATTTATATTCTCTGTGTTATGATTCGGTCAAGCGCCCCGCCGCCGCCATGTCCAGCTCGTTCGAACTCTCGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | GATTATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCACTCGGGACGACCTCGTaGCAGGGCTGGCTCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DYVQSLANVHTYKVQRGSLGTTS*QGWLGR Trigger: CCTGCCGAGCCAGCCCTGCAACGAGGTCGTCCCGAG...TGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCCTCGGGACGACCTCGTaGCAGGGCTGGCTCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLKYYKQLKVERHPPQQCLGTTS*QGWLGR Trigger: CCTGCCGAGCCAGCCCTGCAACGAGGTCGTCCCGAG...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTACCAGGCTCGTGGTTCTGGACCACACAGGAAGAACCCAGGTGGGGGATTCACCTTGCCCTCCTaGGCTAGTCTGTCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLYQARGSGPHRKNPGGGFTLPS*ASLSLS Trigger: GCTCAATGACAGACTAGCCAAGGAGGGCAAGGTGAA...TCCCCCACCTGGGTTCTTCCTGTGTGGTCCAGAACCACGAGCCTGGTAAAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCCAGTAGGTGCTAGTGACTGTCCTGTGGCTGTCCTATGGGGTGACCAAATTGAGCTGGCAGAGTaGGGCCAGGAAGCCATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: RFPVGASDCPVAVLWGDQIELAE*GQEAIV Trigger: AACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAAT...TTGGTCACCCCATAGGACAGCCACAGGACAGTCACTAGCACCTACTGGAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTTCCAGTAGGTGCTAGTGACTGTCCTGTGGCTGTCCTATGGGGTGACCAATTGGCTAGTCTGTCATaGAGCTGGCAGAGTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RFPVGASDCPVAVLWGDQLASLS*SWQSWA Trigger: GGCCCAACTCTGCCAGCTCAATGACAGACTAGCCAA...TTGGTCACCCCATAGGACAGCCACAGGACAGTCACTAGCACCTACTGGAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAAATCCAAAACCTAGGATCTTGGGACCGTAGCCCTGGCTGGAGTCTCGATTTGGCTAGTCTGTCATaGAGCTGGCAGAGTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKIQNLGSWDRSPGWSLDLASLS*SWQSWA Trigger: GGCCCAACTCTGCCAGCTCAATGACAGACTAGCCAA...ATCGAGACTCCAGCCAGGGCTACGGTCCCAAGATCCTAGGTTTTGGATTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | GGATTATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCGCCAGGAAGCCATCGTaGGGGCCGATCTCACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GLCSISGKCAHIQGPARFARKPS*GPISRF Trigger: GAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...GAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | TCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACGCCAGGAAGCCATCGTaGGGGCCGATCTCACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: SISGKCAHIQGPARFKNHARKPS*GPISRF Trigger: GAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...GTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTCAGGGAAGGCTCTGAAGCAGCAGATATAGATCGTAAGCTCTCTGGCAAGATTGAGCTGGCAGAGTaGGGCCAGGAAGCCATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILREGSEAADIDRKLSGKIELAE*GQEAIV Trigger: AACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAAT...CTTGCCAGAGAGCTTACGATCTATATCTGCTGCTTCAGAGCCTTCCCTGAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | GATTATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAGCCAGGAAGCCATCGTaGGGGCCGATCTCACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: DYVQSLANVHTYKVQRGSARKPS*GPISRF Trigger: GAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...TGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTACAGGTCGTTGAGATCTaGCACCGAGAGTTCGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: LWQMCTHTRSSEVQKPPLQVVEI*HREFER Trigger: TCGTTCGAACTCTCGGTGCAAGATCTCAACGACCTG...TAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAAGCTAGCACTGGTGTaGACGTGCATGAAGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLANVHTYKVQRGSKTTLKLALV*TCMKDL Trigger: CAGGTCCTTCATGCACGTCAACACCAGTGCTAGCTT...AAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | TATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAGCCAGGAAGCCATCGTaGGGGCCGATCTCACGATTC | + |
|
Preference number: 5 (lower is better) Translates to: YVQSLANVHTYKVQRGSKARKPS*GPISRF Trigger: GAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...TTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | GCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGATTGAGCTGGCAGAGTaGGGCCAGGAAGCCATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: ANVHTYKVQRGSKTTLRKIELAE*GQEAIV Trigger: AACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAAT...CTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAGGATCCTTGCCCTCCTaGGCTAGTCTGTCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WQMCTHTRSSEVQKPPLEGSLPS*ASLSLS Trigger: GCTCAATGACAGACTAGCCAAGGAGGGCAAGGATCC...TTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125794.2 |
||
| CDS-3UTR CAA 90 bp | GTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCCAGGTCGTTGAGATCTaGCACCGAGAGTTCGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: VQSLANVHTYKVQRGSKTQVVEI*HREFER Trigger: TCGTTCGAACTCTCGGTGCAAGATCTCAACGACCTG...GGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | CAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGTTCCGAGAGCAGGTCGTaGAGATCTTGCACCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QMCTHTRSSEVQKPPLESSESRS*RSCTES Trigger: ACTCTCGGTGCAAGATCTCAACGACCTGCTCTCGGA...ACTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | AATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGTTCTCCGAGAGCAGGTCGTaGAGATCTTGCACCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NVHTYKVQRGSKTTLRKFSESRS*RSCTES Trigger: ACTCTCGGTGCAAGATCTCAACGACCTGCTCTCGGA...GAACTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | TTACCTAGACAAAGAGAGACTGTGTCCCAATCGACTGGGGAGCCACAATTTTCAAAGCTAGCACTGGTGTaGACGTGCATGAAGGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRQRETVSQSTGEPQFSKLALV*TCMKDL Trigger: CAGGTCCTTCATGCACGTCAACACCAGTGCTAGCTT...TGAAAATTGTGGCTCCCCAGTCGATTGGGACACAGTCTCTCTTTGTCTAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCAAGGCACACTTTAAACATTCCAAAGAATCAAGATAGCCTCTGGGAAAAAGCCAGGAAGCCATCGTaGGGGCCGATCTCACGATTC | + |
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Preference number: 5 (lower is better) Translates to: LARHTLNIPKNQDSLWEKARKPS*GPISRF Trigger: GAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGC...TTTTTCCCAGAGGCTATCTTGATTCTTTGGAATGTTTAAAGTGTGCCTTGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | CAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGTATTGAGCTGGCAGAGTaGGGCCAGGAAGCCATCGTT | + |
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Preference number: 5 (lower is better) Translates to: QMCTHTRSSEVQKPPLESIELAE*GQEAIV Trigger: AACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAAT...ACTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACATTGAGCTGGCAGAGTaGGGCCAGGAAGCCATCGTT | + |
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Preference number: 5 (lower is better) Translates to: CSISGKCAHIQGPARFKNIELAE*GQEAIV Trigger: AACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAAT...GTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | TTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCATTGGCTAGTCTGTCATaGAGCTGGCAGAGTTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FNLWQMCTHTRSSEVQKPLASLS*SWQSWA Trigger: GGCCCAACTCTGCCAGCTCAATGACAGACTAGCCAA...TGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | TGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACTTGGCTAGTCTGTCATaGAGCTGGCAGAGTTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CSISGKCAHIQGPARFKNLASLS*SWQSWA Trigger: GGCCCAACTCTGCCAGCTCAATGACAGACTAGCCAA...GTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | CAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAAAGTTTGGCTAGTCTGTCATaGAGCTGGCAGAGTTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: QMCTHTRSSEVQKPPLESLASLS*SWQSWA Trigger: GGCCCAACTCTGCCAGCTCAATGACAGACTAGCCAA...ACTTTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | TGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAACCACCCTTAGAATTCACCTTGCCCTCCTaGGCTAGTCTGTCATTGAGC | + |
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Preference number: 5 (lower is better) Translates to: WQMCTHTRSSEVQKPPLEFTLPS*ASLSLS Trigger: GCTCAATGACAGACTAGCCAAGGAGGGCAAGGTGAA...TTCTAAGGGTGGTTTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | TATGCCACAGACAGGGACATAAACCTGAACCTCACCTCAGGGAGAGACATAAATTTCACCTTGCCCTCCTaGGCTAGTCTGTCATTGAGC | + |
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Preference number: 5 (lower is better) Translates to: YATDRDINLNLTSGRDINFTLPS*ASLSLS Trigger: GCTCAATGACAGACTAGCCAAGGAGGGCAAGGTGAA...ATTTATGTCTCTCCCTGAGGTGAGGTTCAGGTTTATGTCCCTGTCTGTGGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | CATCTTAAATACTATAAGCAACTTAAGGTGGAAAGGCACCCGCCTCAACAGTGCTTCACCTTGCCCTCCTaGGCTAGTCTGTCATTGAGC | + |
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Preference number: 5 (lower is better) Translates to: HLKYYKQLKVERHPPQQCFTLPS*ASLSLS Trigger: GCTCAATGACAGACTAGCCAAGGAGGGCAAGGTGAA...GCACTGTTGAGGCGGGTGCCTTTCCACCTTAAGTTGCTTATAGTATTTAAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000151678.8 |
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| CDS-3UTR CAA 90 bp | CTGGCAAGGCACACTTTAAACATTCCAAAGAATCAAGATAGCCTCTGGGAAAAAAAGCTAGCACTGGTGTaGACGTGCATGAAGGACCTG | + |
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Preference number: 5 (lower is better) Translates to: LARHTLNIPKNQDSLWEKKLALV*TCMKDL Trigger: CAGGTCCTTCATGCACGTCAACACCAGTGCTAGCTT...TTTTTCCCAGAGGCTATCTTGATTCTTTGGAATGTTTAAAGTGTGCCTTGCCAG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 |
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| CDS-3UTR CAA 90 bp | TATGTTCAATCTCTGGCAAATGTGCACACATACAAGGTCCAGCGAGGTTCAAAAAGGCTGTTTCTTTCTTaGCTCTCTCTCTCTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: YVQSLANVHTYKVQRGSKRLFLS*LSLSPF Trigger: GAATGGAGAGAGAGAGAGCAAAGAAAGAAACAGCCT...TTTTGAACCTCGCTGGACCTTGTATGTGTGCACATTTGCCAGAGATTGAACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125794.2 |
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| CDS GCA 72 bp | GTAGCCCTCGCGGCAATGGACAAGCACCCGGCGCGTTaGCCACGTAGACCCTCGGGACGACCTCGTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VALAAMDKHPAR*PRRPSGRPRCR Trigger: CCTGCAACGAGGTCGTCCCGAGGGTCTACGTGGGCAACGCGCCGGGTGCTTGTCCATTGCCGCGAGGGCTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143177.2 |
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| CDS CCA 72 bp | CCCTCGCGGCAATGGACAAGCACCCGGCCATTTTTATaGGCCAGCGCCTGGTCAATGAAATCTGTGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: PSRQWTSTRPFL*ASAWSMKSVAL Trigger: AAGGGCCACAGATTTCATTGACCAGGCGCTGGCCCATAAAAATGGCCGGGTGCTTGTCCATTGCCGCGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS CAA 90 bp | GCTAGTCTGTCATTGAGCTGGCAGAGTTGGGCCAGGAAGCCATCGTaGGGGCCGATCTCACGATTCTGCCTCACAGTACTCAGAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: ASLSLSWQSWARKPS*GPISRFCLTVLRAD Trigger: GTCTGCTCTGAGTACTGTGAGGCAGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGCCCAACTCTGCCAGCTCAATGACAGACTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS GCA 72 bp | GCCAGGAAGCCATCGTTGGGGCCGATCTCACGATTCTaGCTCACAGTACTCAGAGCAGACTTGACGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: ARKPSLGPISRF*LTVLRADLTSI Trigger: GATGGACGTCAAGTCTGCTCTGAGTACTGTGAGGCAGAATCGTGAGATCGGCCCCAACGATGGCTTCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003612.13 ENSMUST00000107172.8 ENSMUST00000107173.9 ENSMUST00000125794.2 ENSMUST00000151678.8 |
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| CDS CAA 72 bp | CTGTCCAGCGAGTCAGTTTCAGGATCCTTGCCCTCCTaGGCTAGTCTGTCATTGAGCTGGCAGAGTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSSESVSGSLPS*ASLSLSWQSWA Trigger: GGCCCAACTCTGCCAGCTCAATGACAGACTAGCCAAGGAGGGCAAGGATCCTGAAACTGACTCGCTGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125794.2 |
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| CDS TCA 72 bp | GTTCGAACGAGCTGGACATGGCGGCGGCGGGGCGCTTaGCCGAATCATAACACAGAGAATATAAATACCGGA | + |
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Preference number: 6 (lower is better) Translates to: VRTSWTWRRRGA*PNHNTENINTG Trigger: TCCGGTATTTATATTCTCTGTGTTATGATTCGGTCAAGCGCCCCGCCGCCGCCATGTCCAGCTCGTTCGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107173.9 |
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| CDS CCA 72 bp | GGGAAGCTGCTGTGTACCCAGGAAGCCTCATTTTTATaGGCCAGCGCCTGGTCAATGAAATCTGTGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GKLLCTQEASFL*ASAWSMKSVAL Trigger: AAGGGCCACAGATTTCATTGACCAGGCGCTGGCCCATAAAAATGAGGCTTCCTGGGTACACAGCAGCTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176261.2 |
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| CDS GCA 72 bp | GGGAGTTCTCTTTGGGAATCACCAGGACAGGGAAGCTaGTGTGTACCCAGGAAGCCTCATTTTTATGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSSLWESPGQGS*CVPRKPHFYGP Trigger: TGGCCCATAAAAATGAGGCTTCCTGGGTACACAGCAGCTTCCCTGTCCTGGTGATTCCCAAAGAGAACTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176261.2 |
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| CDS CCA 72 bp | AGAACTTCTGTAAGTCCAGTGGTAGGGAGTTCTCTTTaGGAATCACCAGGACAGGGAAGCTGCTGTGTACCC | + |
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Preference number: 6 (lower is better) Translates to: RTSVSPVVGSSL*ESPGQGSCCVP Trigger: GGGTACACAGCAGCTTCCCTGTCCTGGTGATTCCCAAAGAGAACTCCCTACCACTGGACTTACAGAAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176261.2 |
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