RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DUSP27 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026564

Ensembl transcript IDs: ENSMUST00000085992.4, ENSMUST00000192369.6

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATaGTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTGGC +
Preference number: 1 (lower is better)
Translates to: SCLFSTLLSRPFLLG*LHFCPYGRACITLG
Trigger: GCCAAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 90 bp CTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCTGGTCCAGAATTTaGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTC +
Preference number: 1 (lower is better)
Translates to: LRGPLVIESVSWSRI*GSHEWLLSLLHPTV
Trigger: GACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCACCAAAGGCCCTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR GCA 90 bp TCACCTGGGTCTCATTGCGAAACCTCAATGAAGAGAACCACAGCCTaGAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCA +
Preference number: 1 (lower is better)
Translates to: SPGSHCETSMKRTTA*KSGLSQWLCRLTSP
Trigger: TGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGACCCAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 90 bp ATGATAGTCAAGCATTGGCAGGGAGAGGCCAGAATCACAACAGAATaGATCACCTGGGTCTCATTGCGAAACCTCAATGAAGAGAACCAC +
Preference number: 1 (lower is better)
Translates to: MIVKHWQGEARITTE*ITWVSLRNLNEENH
Trigger: GTGGTTCTCTTCATTGAGGTTTCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCAATGCTTGACTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR TCA 90 bp AATCACAACAGAATGGATCACCTGGGTCTCATTGCGAAACCTCAATaGAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTT +
Preference number: 1 (lower is better)
Translates to: NHNRMDHLGLIAKPQ*REPQPASQVFLSGF
Trigger: AAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR CCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGAGCCTGCATAACCCTTaGCAGGTCATGGTAAGCTGT +
Preference number: 2 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWSLHNP*QVMVSC
Trigger: ACAGCTTACCATGACCTGCCAAGGGTTATGCAGGCT...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR GCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGGGATGCTTGCATTTTTaGCCATATGGAAGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLGCLHF*PYGRAC
Trigger: GCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCC...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR CCA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTTGGGGCTCGCATGAATaGCTCTTGTCTCTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: TTKCRRETGKLRRETGKLWGSHE*LLSLLH
Trigger: GTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCA...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR GCA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTTTCTACTTGGATGCTTaGATTTTTGCCCATATGGAA +
Preference number: 2 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTFYLDA*IFAHME
Trigger: TTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAA...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR GCA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCTTCTACTTGGATGCTTaGATTTTTGCCCATATGGAA +
Preference number: 2 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLFYLDA*IFAHME
Trigger: TTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAA...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR GCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAACCCTTTCTACTTGGATaGTTGCATTTTTGCCCATAT +
Preference number: 2 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEPFLLG*LHFCPY
Trigger: ATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGG...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR GCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATACCCTTTCTACTTGGATaGTTGCATTTTTGCCCATAT +
Preference number: 2 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIPFLLG*LHFCPY
Trigger: ATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGG...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 72 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATaGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: SVSWSRIWGSHE*LLSLLHPTVQA
Trigger: GGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 72 bp GCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTaGCAGGTCATGGTAAGCTGTTCCCAAGCCCAGTGT +
Preference number: 3 (lower is better)
Translates to: AFLPIWKSLHNP*QVMVSCSQAQC
Trigger: ACACTGGGCTTGGGAACAGCTTACCATGACCTGCCAAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR-3UTR CAA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTTGGATGCTTGCATTTTaGCCCATATGGAAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTWMLAF*PIWKSL
Trigger: CAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCA...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR TCA 72 bp AGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATaGATGGCTCTTGTCTCTTCTCCACCCTACTGTCCA +
Preference number: 3 (lower is better)
Translates to: RKCKLVQNLGLA*MALVSSPPYCP
Trigger: TGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 72 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTaGCTTTGTAGACTCACTTCTCCACTCTGTGGTGGA +
Preference number: 3 (lower is better)
Translates to: KRTTACKSGLSQ*LCRLTSPLCGG
Trigger: TCCACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 72 bp CAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTaGGTCTCATTGCGAAACCTCAATGAAGAGAACCAC +
Preference number: 3 (lower is better)
Translates to: QGEARITTEWIT*VSLRNLNEENH
Trigger: GTGGTTCTCTTCATTGAGGTTTCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR TCA 72 bp AGAATGGATCACCTGGGTCTCATTGCGAAACCTCAATaGAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: RMDHLGLIAKPQ*REPQPASQVFL
Trigger: GAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGACCCAGGTGATCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR GCA 72 bp TTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATaGTTGCATTTTTGCCCATATGGAAGAGCCTGCATA +
Preference number: 3 (lower is better)
Translates to: FSTLLSRPFLLG*LHFCPYGRACI
Trigger: TATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 72 bp CCTTTGGTGATAGAAAGTGTAAGCTGGTCCAGAATTTaGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCAC +
Preference number: 3 (lower is better)
Translates to: PLVIESVSWSRI*GSHEWLLSLLH
Trigger: GTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCACCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CCA 72 bp AAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCTaGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTG +
Preference number: 3 (lower is better)
Translates to: KLRGPLVIESVS*SRIWGSHEWLL
Trigger: CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR GCA 72 bp GACTCACTTCTCCACTCTGTGGTGGACACTACCAAATaGAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACA +
Preference number: 3 (lower is better)
Translates to: DSLLHSVVDTTK*RRETGKLRRET
Trigger: TGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGTGTCCACCACAGAGTGGAGAAGTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCGTCCCTTTCTACCCTaGGCAGCCTCCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLRPFLP*AASPLG
Trigger: CCCCAAGGGGGAGGCTGCTCAGGGTAGAAAGGGACG...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGACACTCAGGGAGGTGCTaGGCACGGAGAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRHSGRC*ARRAGH
Trigger: ATGACCAGCTCTCCGTGCTCAGCACCTCCCTGAGTG...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCACCCAGTCCCTGGGCCTaGTCCAGTTTGGACGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAPSPWA*SSLDAL
Trigger: CAAGGCGTCCAAACTGGACCAGGCCCAGGGACTGGG...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGAGCACACAGGGGGTGTTaGACAGGCTCCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRAHRGC*TGSCHP
Trigger: TGGATGACAGGAGCCTGTTCAACACCCCCTGTGTGC...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGACAGCTTCCCATGGACTaGCTCTCCTCCAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRQLPMD*LSSSVC
Trigger: GCAGACACTGGAGGAGAGTCAGTCCATGGGAAGCTG...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCACACTCAGGGAGGTGCTaGGCACGGAGAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAHSGRC*ARRAGH
Trigger: ATGACCAGCTCTCCGTGCTCAGCACCTCCCTGAGTG...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTCGTCCTCTCGGACCCTaGCCCCTGCCTCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTRPLGP*PLPLNN
Trigger: ATTGTTCAGAGGCAGGGGGCAGGGTCCGAGAGGACG...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCAGAGGACAGCACAGACTaGACGTCGGAGCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAEDSTD*TSELGL
Trigger: GAGACCCAGCTCCGACGTGCAGTCTGTGCTGTCCTC...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGTGGACGCCTTGGCTCTaGGGACTCCTCCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWWTPWL*GLLPIR
Trigger: TCTGATGGGGAGGAGTCCCCAGAGCCAAGGCGTCCA...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGACATCTTCCCAGTCCCTaGGCCTGGTCCAGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRHLPSP*AWSSLD
Trigger: GTCCAAACTGGACCAGGCCCAGGGACTGGGAAGATG...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCGTCCCTTTCTACCCTaGGCAGCCTCCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNRPFLP*AASPLG
Trigger: CCCCAAGGGGGAGGCTGCTCAGGGTAGAAAGGGACG...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGACAGCAGACTCCAGCATaGCTGGACACTCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRQQTPA*LDTQCL
Trigger: CAGACACTGAGTGTCCAGGCATGCTGGAGTCTGCTG...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGTCCACATGTCCCAGGTaGTCTCCGAGGACTCCGAGT +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWSTCPR*SPRTPS
Trigger: ACTCGGAGTCCTCGGAGAGCACCTGGGACATGTGGA...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCGAGGACAGCACAGACTaGACGTCGGAGCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLEDSTD*TSELGL
Trigger: GAGACCCAGCTCCGACGTGCAGTCTGTGCTGTCCTC...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGTTTGGAGACCTGGCTaGCCTTCCCCAAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAVWRPG*PSPRRS
Trigger: GCTCCTCCTTGGGGAAGGCCAGCCAGGTCTCCAAAC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCAAGGCCGCAGGCTGCTaGAGCTGCCTTCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLKAAGC*SCLHAC
Trigger: GCAAGCATGAAGGCAGCTCCAGCAGCCTGCGGCCTT...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CAA 72 bp AGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTaGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SWSRIWGSHEWL*SLLHPTVQALS
Trigger: AGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGGACCACCAGCACTGCTaGCCTGCTGATACCCATTTC +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWDHQHC*PADTHF
Trigger: GAAATGGGTATCAGCAGGTCAGCAGTGCTGGTGGTC...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCTGGGTGCTGAGTACTaGCGCAGTGTCCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNLGAEY*RSVPIR
Trigger: GCGGATGGGGACACTGCGTCAGTACTCAGCACCCAG...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCCTCCGATACTGGGACTaGCGCCCAGATGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRALRYWD*RPDANL
Trigger: GAGGTTTGCATCTGGGCGTCAGTCCCAGTATCGGAG...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGCCCTTGGGGAAGCCCTaGCCCTTCCTCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLPLGKP*PFLHSS
Trigger: TGAAGAGTGGAGGAAGGGGCAGGGCTTCCCCAAGGG...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTCCCACCTTTTTCTGGTaGTTCAGCTTCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTPTFFW*FSFQAW
Trigger: CCAGGCCTGGAAGCTGAAGCACCAGAAAAAGGTGGG...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCAGGCGGGCATGTTACTTaGATGAGAACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAGGHVT*MRTVAL
Trigger: CAGAGCCACCGTTCTCATGCAAGTAACATGCCCGCC...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGGCAGGCTGCTGGAGCTaGCTTCATGCTTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWAGCWS*LHACNR
Trigger: TCTGTTGCAAGCATGAAGGCAGCTCCAGCAGCCTGC...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGGGCTGTAGATGGGCTTaGTGGTCCCCCTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWGCRWA*WSPSLC
Trigger: ACAAAGTGAGGGGGACCAGCAAGCCCATCTACAGCC...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCGGACTGACGCCCAGATaGAAACCTCCCTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLGLTPR*KPPFLS
Trigger: CGAGAGGAAGGGAGGTTTGCATCTGGGCGTCAGTCC...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCACTGGTTTGGAGACCTaGCTGGCCTTCCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLTGLET*LAFPKE
Trigger: CTCCTTGGGGAAGGCCAGCCAGGTCTCCAAACCAGT...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTGGGGGATGCTCCTGCTaGCTGTTGAGCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTGGCSC*LLSCLP
Trigger: AGGCAGACAGCTCAACAGCCAGCAGGAGCATCCCCC...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCACAAAGAGGCTGTAGATaGGCTTGCTGGTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAQRGCR*ACWSPS
Trigger: TGAGGGGGACCAGCAAGCCCATCTACAGCCTCTTTG...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGATCTCTCTGGCCTCCTTaGTGGTGGAAGATGAGAACC +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRSLWPP*WWKMRT
Trigger: GGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGA...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTGGACGCCTTGGCTCTaGGGACTCCTCCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLWTPWL*GLLPIR
Trigger: TCTGATGGGGAGGAGTCCCCAGAGCCAAGGCGTCCA...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCCAGTCCCTGGGCCTaGTCCAGTTTGGACGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNPSPWA*SSLDAL
Trigger: CAAGGCGTCCAAACTGGACCAGGCCCAGGGACTGGG...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCACGCTTTTCTCAGCTATaGAGACGTTGGGCCACACCT +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLARFSQL*RRWATP
Trigger: AGGTGTGGCCCAACGTCTTCATAGCTGAGAAAAGCG...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGATACCCATTTCACTGCTaGCCAGGACTTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRYPFHC*PGLSLC
Trigger: ACAGAGGGAAAGTCCTGGTCAGCAGTGAAATGGGTA...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCTCCATCCTGTGCTaGGGACATAGAACAGCTACG +
Preference number: 4 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTVSILC*GHRTAT
Trigger: CGTAGCTGTTCTATGTCCTCAGCACAGGATGGAGAC...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAACTGGGTGCTGAGTACTaGCGCAGTGTCCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIELGAEY*RSVPIR
Trigger: GCGGATGGGGACACTGCGTCAGTACTCAGCACCCAG...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp GTCTCATTGCGAAACCTCAATGAAGAGAACCACAGCCTGCAAGTCAGGTCTTTCCTCCGATACTGGGACTaGCGCCCAGATGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: VSLRNLNEENHSLQVRSFLRYWD*RPDANL
Trigger: GAGGTTTGCATCTGGGCGTCAGTCCCAGTATCGGAG...GAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGCGCTTAGGGTGTGTCTaGGCCTTCTGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLRLGCV*AFCWSR
Trigger: CCTACTCCAGCAGAAGGCGCAGACACACCCTAAGCG...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGGAGGTTCTTCTCTCCTaGTGCTGCCTCTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWEVLLS*CCLFCT
Trigger: GGTACAGAAGAGGCAGCAGCAGGAGAGAAGAACCTC...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCAGAGGTTCTTCTCTCCTaGTGCTGCCTCTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAEVLLS*CCLFCT
Trigger: GGTACAGAAGAGGCAGCAGCAGGAGAGAAGAACCTC...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCCCCACCTTTTTCTGGTaGTTCAGCTTCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLPTFFW*FSFQAW
Trigger: CCAGGCCTGGAAGCTGAAGCACCAGAAAAAGGTGGG...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTCTGGAGCTGCCTTCATaGTTGCAACAGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTLELPS*LQQRVG
Trigger: GCCCACCCTCTGTTGCAAGCATGAAGGCAGCTCCAG...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTGTTTGGAGACCTGGCTaGCCTTCCCCAAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSVWRPG*PSPRRS
Trigger: GCTCCTCCTTGGGGAAGGCCAGCCAGGTCTCCAAAC...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTACTGGTTTGGAGACCTaGCTGGCCTTCCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTTGLET*LAFPKE
Trigger: CTCCTTGGGGAAGGCCAGCCAGGTCTCCAAACCAGT...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCTGCGCCTTCTGCTaGAGTAGGAGTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTVCAFC*SRSSLP
Trigger: AGGAAGAGAACTCCTACTCCAGCAGAAGGCGCAGAC...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGCTTGCAACAGAGGGTaGGCGGGACAACAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAACNRG*AGQQEH
Trigger: ATGCTCTTGTTGTCCCGCCCACCCTCTGTTGCAAGC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GTCTCATTGCGAAACCTCAATGAAGAGAACCACAGCCTGCAAGTCAGGTCTTTCAGGTCAGCGAGCTGGTaGAGGACAGCACAGACTGCA +
Preference number: 4 (lower is better)
Translates to: VSLRNLNEENHSLQVRSFRSASW*RTAQTA
Trigger: TGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCT...GAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGTCTGTCTCCGGCTTCTaGGAATTACTGCGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWSVSGF*ELLREE
Trigger: CTCCTCTCGCAGTAATTCCCAGAAGCCGGAGACAGA...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAACCAGTTTGGACGCCTTaGCTCTGGGGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEPVWTP*LWGLLP
Trigger: GGGGAGGAGTCCCCAGAGCCAAGGCGTCCAAACTGG...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATACCAGTTTGGACGCCTTaGCTCTGGGGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIPVWTP*LWGLLP
Trigger: GGGGAGGAGTCCCCAGAGCCAAGGCGTCCAAACTGG...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCGGGCGAGGGTTTCATTaGCGACATTGGCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLGRGFH*RHWQSS
Trigger: ACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCC...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGAGTCAAGGAACTCAGCTaGTTTCCGGAAATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: WQGEARITTEWITWVSLRVKELS*FPEMLG
Trigger: TCCCAACATTTCCGGAAAGCAGCTGAGTTCCTTGAC...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCTTCTCTCCTGCTGCTaGCTCTTCTGTACCATGCTC +
Preference number: 4 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLLLSCC*LFCTML
Trigger: GAGCATGGTACAGAAGAGGCAGCAGCAGGAGAGAAG...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTGGCTGTAGATGGGCTTaGTGGTCCCCCTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTGCRWA*WSPSLC
Trigger: ACAAAGTGAGGGGGACCAGCAAGCCCATCTACAGCC...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATCCTGCAGCTCCATTTaGATCTCTTTCTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLASCSSI*ISFSFR
Trigger: CCGGAAGGAGAAAGAGATGCAAATGGAGCTGCAGGA...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTGGACTGACGCCCAGATaGAAACCTCCCTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSGLTPR*KPPFLS
Trigger: CGAGAGGAAGGGAGGTTTGCATCTGGGCGTCAGTCC...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTACAGCCGAGGAGAGGTaGATGGGCTCCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTTAEER*MGSMKM
Trigger: CATCTTCATGGAGCCCATCCACCTCTCCTCGGCTGT...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGGAGATGTCCACCTCTaGGAAGTCATCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAGDVHL*EVIHFH
Trigger: GTGGAAGTGGATGACTTCCCAGAGGTGGACATCTCC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGCTTTCCGGAAATGTTaGGAGATGTCCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAAFRKC*EMSTSG
Trigger: CCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGAGGAGCCACTCAGGTaGCTAGTGGCATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAEEPLR*LVASSS
Trigger: AGAAGATGATGCCACTAGCCACCTGAGTGGCTCCTC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTCGGCTCTGCCACTCCTaGATTATCCTTTCTACATCC +
Preference number: 4 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTRLCHS*IILSTS
Trigger: GGATGTAGAAAGGATAATCCAGGAGTGGCAGAGCCG...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTTCGCGCCCTTTGGCTTaGTACCTCTCATTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGSRPLA*YLSFRL
Trigger: GAGCCGAAATGAGAGGTACCAAGCCAAAGGGCGCGA...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCACTGCTCGCGCCCTTTaGCTTGGTACCTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLTARAL*LGTSHF
Trigger: GAAATGAGAGGTACCAAGCCAAAGGGCGCGAGCAGT...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGGGGGATGCTCCTGCTaGCTGTTGAGCTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEGGCSC*LLSCLP
Trigger: AGGCAGACAGCTCAACAGCCAGCAGGAGCATCCCCC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAAAGGCCGCAGGCTGCTaGAGCTGCCTTCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIKAAGC*SCLHAC
Trigger: GCAAGCATGAAGGCAGCTCCAGCAGCCTGCGGCCTT...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCTGTAGATGGGCTTGCTaGTCCCCCTCACTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLCRWAC*SPSLCS
Trigger: GGAACAAAGTGAGGGGGACCAGCAAGCCCATCTACA...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGAAGAAATAGGGTTCTaGGCTCTCCTCTCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAEEIGF*ALLSGA
Trigger: AGCTCCCGAGAGGAGAGCCCAGAACCCTATTTCTTC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGCACACAGGGGGTGTTaGACAGGCTCCTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEAHRGC*TGSCHP
Trigger: TGGATGACAGGAGCCTGTTCAACACCCCCTGTGTGC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTACCTTTCCAGGGGAGTaGGCTTGTCCTTGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTTFPGE*ACPCSY
Trigger: GTAGGAACAAGGACAAGCTCACTCCCCTGGAAAGGT...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGGTAGGCTGTCAGGTTaGCATCAGAGAGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAGRLSG*HQRGSS
Trigger: AGAAGAACCTCTCTGATGTCAACCTGACAGCCTACC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTGGGCGAGGGTTTCATTaGCGACATTGGCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGGRGFH*RHWQSS
Trigger: ACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCC...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGGTGTCCTGCTCCTGTaGCCTAGATTTGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAGVLLL*PRFGEL
Trigger: AAGTTCTCCAAATCTAGGTCACAGGAGCAGGACACC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTTACAGCTCTCACATCTaGTTCATCCTCCTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTYSSHI*FILLVW
Trigger: CCAAACGAGGAGGATGAAGCAGATGTGAGAGCTGTA...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGCCTCCAGGATGGCCATaGTGTGGAAGATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLPPGWP*CGRSSG
Trigger: ACCTGATGATCTTCCACAGCATGGCCATCCTGGAGG...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCCCTTGGGGAAGCCCTaGCCCTTCCTCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLPLGKP*PFLHSS
Trigger: TGAAGAGTGGAGGAAGGGGCAGGGCTTCCCCAAGGG...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCACTCTCATTTCGGCTCTaGCACTCCTGGATTATCCTT +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLALSFRL*HSWIIL
Trigger: AAGGATAATCCAGGAGTGGCAGAGCCGAAATGAGAG...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAACGCTTAGGGTGTGTCTaGGCCTTCTGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIERLGCV*AFCWSR
Trigger: CCTACTCCAGCAGAAGGCGCAGACACACCCTAAGCG...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCGTCCTCTCGGACCCTaGCCCCTGCCTCTGAACAAT +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLRPLGP*PLPLNN
Trigger: ATTGTTCAGAGGCAGGGGGCAGGGTCCGAGAGGACG...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAATGCAGACAGGGGGATaGTCCTGCTGGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEMQTGG*SCWLLS
Trigger: GCTCAACAGCCAGCAGGAGCATCCCCCTGTCTGCAT...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGGCGGGCATGTTACTTaGATGAGAACGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLSRPFLLGCLHFCPYGRGGHVT*MRTVAL
Trigger: CAGAGCCACCGTTCTCATGCAAGTAACATGCCCGCC...TCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCCTGGAGCTGCCTTCATaGTTGCAACAGAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRRETGKLRGPLVIESVSLELPS*LQQRVG
Trigger: GCCCACCCTCTGTTGCAAGCATGAAGGCAGCTCCAG...GCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCTTCATCCTCCTCGTTTaGAACTACCTGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLFILLV*NYLLLL
Trigger: GAGGAGGAGCAGGTAGTTCCAAACGAGGAGGATGAA...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GTCTCATTGCGAAACCTCAATGAAGAGAACCACAGCCTGCAAGTCAGGTCTTTCGAGGAGCCACTCAGGTaGCTAGTGGCATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VSLRNLNEENHSLQVRSFEEPLR*LVASSS
Trigger: AGAAGATGATGCCACTAGCCACCTGAGTGGCTCCTC...GAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCGGCTCTGCCACTCCTaGATTATCCTTTCTACATCC +
Preference number: 4 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLRLCHS*IILSTS
Trigger: GGATGTAGAAAGGATAATCCAGGAGTGGCAGAGCCG...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GTCTCATTGCGAAACCTCAATGAAGAGAACCACAGCCTGCAAGTCAGGTCTTTCACTGCTCGCGCCCTTTaGCTTGGTACCTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: VSLRNLNEENHSLQVRSFTARAL*LGTSHF
Trigger: GAAATGAGAGGTACCAAGCCAAAGGGCGCGAGCAGT...GAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTGTCTGCGCCTTCTGCTaGAGTAGGAGTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGVCAFC*SRSSLP
Trigger: AGGAAGAGAACTCCTACTCCAGCAGAAGGCGCAGAC...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTGCTTGCAACAGAGGGTaGGCGGGACAACAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSACNRG*AGQQEH
Trigger: ATGCTCTTGTTGTCCCGCCCACCCTCTGTTGCAAGC...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGACAAAGAGGCTGTAGATaGGCTTGCTGGTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLSRPFLLGCLHFCPYGRQRGCR*ACWSPS
Trigger: TGAGGGGGACCAGCAAGCCCATCTACAGCCTCTTTG...TCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTGCACAGTGTCACCATTaGCTTCGTGGAAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTAQCHH*LRGRRC
Trigger: ACACCTCCTTCCACGAAGCCAATGGTGACACTGTGC...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGACTTGTGCATCTCTCTaGCCTCCTTGGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLTCASL*PPWWWK
Trigger: CTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGT...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTGAAGAAATAGGGTTCTaGGCTCTCCTCTCGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGEEIGF*ALLSGA
Trigger: AGCTCCCGAGAGGAGAGCCCAGAACCCTATTTCTTC...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CAA 72 bp TCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTaGCATTTTTGCCCATATGGAAGAGCCTGCATAACC +
Preference number: 4 (lower is better)
Translates to: STLLSRPFLLGC*HFCPYGRACIT
Trigger: GGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CAA 72 bp GTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTaGGATGCTTGCATTTTTGCCCATATGGAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VSSPPYCPGPFY*DACIFAHMEEP
Trigger: AGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTTACCCATTTCACTGCTaGCCAGGACTTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGYPFHC*PGLSLC
Trigger: ACAGAGGGAAAGTCCTGGTCAGCAGTGAAATGGGTA...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGACCACCAGCACTGCTaGCCTGCTGATACCCATTTC +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIDHQHC*PADTHF
Trigger: GAAATGGGTATCAGCAGGTCAGCAGTGCTGGTGGTC...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTGTCTCCATCCTGTGCTaGGGACATAGAACAGCTACG +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSVSILC*GHRTAT
Trigger: CGTAGCTGTTCTATGTCCTCAGCACAGGATGGAGAC...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCAGCTTCCCATGGACTaGCTCTCCTCCAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLQLPMD*LSSSVC
Trigger: GCAGACACTGGAGGAGAGTCAGTCCATGGGAAGCTG...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTCAGCAGACTCCAGCATaGCTGGACACTCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPQQTPA*LDTQCL
Trigger: CAGACACTGAGTGTCCAGGCATGCTGGAGTCTGCTG...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCCTCTCATTTCGGCTCTaGCACTCCTGGATTATCCTT +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRALSFRL*HSWIIL
Trigger: AAGGATAATCCAGGAGTGGCAGAGCCGAAATGAGAG...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTTCCACATGTCCCAGGTaGTCTCCGAGGACTCCGAGT +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLSTCPR*SPRTPS
Trigger: ACTCGGAGTCCTCGGAGAGCACCTGGGACATGTGGA...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGGTTCTTCTCTCCTGCTaGTGCCTCTTCTGTACCATG +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLVLLSC*CLFCTM
Trigger: CATGGTACAGAAGAGGCAGCAGCAGGAGAGAAGAAC...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCCCGTGTCTTCTCCTTTaGTCATCTCAACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLPCLLL*SSQPLP
Trigger: AGGAAGTGGTTGAGATGAGCAAAGGAGAAGACACGG...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTATGCAGACAGGGGGATaGTCCTGCTGGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TTKCRRETGKLRRETGKLMQTGG*SCWLLS
Trigger: GCTCAACAGCCAGCAGGAGCATCCCCCTGTCTGCAT...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGCAGGCTGCTGGAGCTaGCTTCATGCTTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIAGCWS*LHACNR
Trigger: TCTGTTGCAAGCATGAAGGCAGCTCCAGCAGCCTGC...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTGCTTCTGGGAATTACTaGGAGAGGAGTACCGGAAGC +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSASGNY*ERSTGS
Trigger: GCTTCCGGTACTCCTCTCGCAGTAATTCCCAGAAGC...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTTGGAAGGAGGTGTCCTaGTCCTGTGACCTAGATTTG +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGWKEVS*SCDLDL
Trigger: CAAATCTAGGTCACAGGAGCAGGACACCTCCTTCCA...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGCCTCTTGCTGGTTTGTaGTTCTCCGATACTGGGACT +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLPLAGL*FSDTGT
Trigger: AGTCCCAGTATCGGAGAAGCACAAACCAGCAAGAGG...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGTTCTGGTTTCCTCTTaGCGCTTTCTCCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEVLVSS*RFLQAA
Trigger: TGCCGCCTGGAGAAAGCGGCAAGAGGAAACCAGAAC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTTTCATCCTCCTCGTTTaGAACTACCTGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGFILLV*NYLLLL
Trigger: GAGGAGGAGCAGGTAGTTCCAAACGAGGAGGATGAA...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCACAGCCGAGGAGAGGTaGATGGGCTCCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: LRRETGKLRGPLVIESVSTAEER*MGSMKM
Trigger: CATCTTCATGGAGCCCATCCACCTCTCCTCGGCTGT...GCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTAGACTCCAGCATGCCTaGACACTCAGTGTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTRLQHA*TLSVCS
Trigger: AGAACAGACACTGAGTGTCCAGGCATGCTGGAGTCT...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTGGAGATGTCCACCTCTaGGAAGTCATCCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSGDVHL*EVIHFH
Trigger: GTGGAAGTGGATGACTTCCCAGAGGTGGACATCTCC...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTAGTTGTAGAAGGAGCTaGCCTCAGACAACACGCTCT +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGSCRRS*PQTTRS
Trigger: AGAGCGTGTTGTCTGAGGCCAGCTCCTTCTACAACT...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAATACTGGCAATGGAAATaGTGTCTCCAGGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEYWQWK*CLQAPP
Trigger: CGGTGGGGCCTGGAGACACCATTTCCATTGCCAGTA...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCAATTTCGTTTTGCTTCTaGGCGAGGGTTTCATTGACG +
Preference number: 4 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAISFCF*ARVSLT
Trigger: CGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAAT...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGGTCAGCGAGCTGGTaGAGGACAGCACAGACTGCA +
Preference number: 4 (lower is better)
Translates to: TTKCRRETGKLRRETGKLRSASW*RTAQTA
Trigger: TGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCT...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGTATAGTGATCAGAGATaGCCAGAGAAGAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWYSDQR*PEKRRH
Trigger: ATGCCTCCTCTTCTCTGGCCATCTCTGATCACTATA...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCTGGCCTCCTTGGTGGTaGAAGATGAGAACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRRETGKLRGPLVIESVSWPPWW*KMRTVR
Trigger: CCTCACGGTTCTCATCTTCCACCACCAAGGAGGCCA...GCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTACTTGTGCATCTCTCTaGCCTCCTTGGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSTCASL*PPWWWK
Trigger: CTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGT...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCATCTTCCCAGTCCCTaGGCCTGGTCCAGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLHLPSP*AWSSLD
Trigger: GTCCAAACTGGACCAGGCCCAGGGACTGGGAAGATG...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGTTTGCAGTTTGGTTCTaGTTTCCTCTTGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWFAVWF*FPLAAF
Trigger: GAAAGCGGCAAGAGGAAACCAGAACCAAACTGCAAA...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGTCCGAGTCTTTCTTGTaGAACCCAAATTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWSESFL*NPNWIL
Trigger: GAGAATCCAATTTGGGTTTCACAAGAAAGACTCGGA...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAAACTCCTGTGCCATGTaGGGCATTCAGAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLSRPFLLGCLHFCPYGRNSCAM*GIQNVG
Trigger: ACCCACATTCTGAATGCCGCACATGGCACAGGAGTT...TCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTGTCAAGGAACTCAGCTaGTTTCCGGAAATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTVKELS*FPEMLG
Trigger: TCCCAACATTTCCGGAAAGCAGCTGAGTTCCTTGAC...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCCCTCCAGGATGGCCATaGTGTGGAAGATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LRRETGKLRGPLVIESVSPPGWP*CGRSSG
Trigger: ACCTGATGATCTTCCACAGCATGGCCATCCTGGAGG...GCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCTGTCCTTGTTCCTACTaGAGAAGTTGTAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLCPCSY*RSCRRS
Trigger: GCTCCTTCTACAACTTCTGCAGTAGGAACAAGGACA...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCTGTCCTTGTTCCTACTaGAGAAGTTGTAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLCPCSY*RSCRRS
Trigger: GCTCCTTCTACAACTTCTGCAGTAGGAACAAGGACA...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATACTTCTCTCCTGCTGCTaGCTCTTCTGTACCATGCTC +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVILLSCC*LFCTML
Trigger: GAGCATGGTACAGAAGAGGCAGCAGCAGGAGAGAAG...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGTTCTTCTCTCCTGCTaGTGCCTCTTCTGTACCATG +
Preference number: 4 (lower is better)
Translates to: LLSRPFLLGCLHFCPYGRVLLSC*CLFCTM
Trigger: CATGGTACAGAAGAGGCAGCAGCAGGAGAGAAGAAC...TCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGCTTCTGGGAATTACTaGGAGAGGAGTACCGGAAGC +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIASGNY*ERSTGS
Trigger: GCTTCCGGTACTCCTCTCGCAGTAATTCCCAGAAGC...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGACCGAGAGAACTTGTaGATCTCTCTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIDRENL*ISLASL
Trigger: CAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTC...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTGTTCTGGTTTCCTCTTaGCGCTTTCTCCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TTKCRRETGKLRRETGKLVLVSS*RFLQAA
Trigger: TGCCGCCTGGAGAAAGCGGCAAGAGGAAACCAGAAC...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTTCGCGCCCTTTGGCTTaGTACCTCTCATTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLSRPLA*YLSFRL
Trigger: GAGCCGAAATGAGAGGTACCAAGCCAAAGGGCGCGA...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTAGTTGTAGAAGGAGCTaGCCTCAGACAACACGCTCT +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSSCRRS*PQTTRS
Trigger: AGAGCGTGTTGTCTGAGGCCAGCTCCTTCTACAACT...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTTACTGGCAATGGAAATaGTGTCTCCAGGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLYWQWK*CLQAPP
Trigger: CGGTGGGGCCTGGAGACACCATTTCCATTGCCAGTA...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACTCTGGATACTGGCAATaGAAATGGTGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNSGYWQ*KWCLQA
Trigger: GGCCTGGAGACACCATTTCCATTGCCAGTATCCAGA...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTCCAGTTCTGGATACTaGCAATGGAAATGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRASSSGY*QWKWCL
Trigger: GAGACACCATTTCCATTGCCAGTATCCAGAACTGGA...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGCACAGTGTCACCATTaGCTTCGTGGAAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEAQCHH*LRGRRC
Trigger: ACACCTCCTTCCACGAAGCCAATGGTGACACTGTGC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCTCTCTGGCCTCCTTaGTGGTGGAAGATGAGAACC +
Preference number: 4 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPSLWPP*WWKMRT
Trigger: GGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGA...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTACCTTTCCAGGGGAGTaGGCTTGTCCTTGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: TTKCRRETGKLRRETGKLTFPGE*ACPCSY
Trigger: GTAGGAACAAGGACAAGCTCACTCCCCTGGAAAGGT...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGGTAGGCTGTCAGGTTaGCATCAGAGAGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEGRLSG*HQRGSS
Trigger: AGAAGAACCTCTCTGATGTCAACCTGACAGCCTACC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCCTGCAGCTCCATTTaGATCTCTTTCTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPSCSSI*ISFSFR
Trigger: CCGGAAGGAGAAAGAGATGCAAATGGAGCTGCAGGA...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAATGGAAGGAGGTGTCCTaGTCCTGTGACCTAGATTTG +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEWKEVS*SCDLDL
Trigger: CAAATCTAGGTCACAGGAGCAGGACACCTCCTTCCA...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCCCTCTTGCTGGTTTGTaGTTCTCCGATACTGGGACT +
Preference number: 4 (lower is better)
Translates to: LRRETGKLRGPLVIESVSPLAGL*FSDTGT
Trigger: AGTCCCAGTATCGGAGAAGCACAAACCAGCAAGAGG...GCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp CTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCTCCTCCCTCCTCCTTTaGAGTTTGGTTCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LRRETGKLRGPLVIESVSSSLLL*SLVLVS
Trigger: GGAAACCAGAACCAAACTGCAAAGGAGGAGGGAGGA...GCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTGCTTTCCGGAAATGTTaGGAGATGTCCACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLAFRKC*EMSTSG
Trigger: CCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGC...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACATCAATAAGAGTGACTaGTTTGGAGACCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNINKSD*FGDLAG
Trigger: GCCAGCCAGGTCTCCAAACCAGTCACTCTTATTGAT...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAATCAATAAGAGTGACTaGTTTGGAGACCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLSRPFLLGCLHFCPYGRINKSD*FGDLAG
Trigger: GCCAGCCAGGTCTCCAAACCAGTCACTCTTATTGAT...TCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATATCTGGATACTGGCAATaGAAATGGTGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVISGYWQ*KWCLQA
Trigger: GGCCTGGAGACACCATTTCCATTGCCAGTATCCAGA...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTTCTGTCTCCGGCTTCTaGGAATTACTGCGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TTKCRRETGKLRRETGKLSVSGF*ELLREE
Trigger: CTCCTCTCGCAGTAATTCCCAGAAGCCGGAGACAGA...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTATAGTGATCAGAGATaGCCAGAGAAGAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLYSDQR*PEKRRH
Trigger: ATGCCTCCTCTTCTCTGGCCATCTCTGATCACTATA...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGACCTCATGAAGCTCTaGGTGAATTTCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEDLMKL*VNFLLA
Trigger: GGCCAAGAGGAAATTCACCCAGAGCTTCATGAGGTC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCTCCACTCTGTGGTTTTGCAGTTTGGTTCTaGTTTCCTCTTGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: CKSGLSQWLCRLTSPLCGFAVWF*FPLAAF
Trigger: GAAAGCGGCAAGAGGAAACCAGAACCAAACTGCAAA...ACCACAGAGTGGAGAAGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTCCATCAATTTCTCATTaGGCTCCCGCAGTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTPSISH*APAVVL
Trigger: TAAAACAACTGCGGGAGCTCAATGAGAAATTGATGG...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTGGCCTTCTTCTTCTTaGAGAGAGAGCTACGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPWPSSS*RESYAC
Trigger: ACAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCA...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTGGTGTCCTGCTCCTGTaGCCTAGATTTGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLGVLLL*PRFGEL
Trigger: AAGTTCTCCAAATCTAGGTCACAGGAGCAGGACACC...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAATACAGCTCTCACATCTaGTTCATCCTCCTCGTTTGG +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEYSSHI*FILLVW
Trigger: CCAAACGAGGAGGATGAAGCAGATGTGAGAGCTGTA...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATACCGTGTCTTCTCCTTTaGTCATCTCAACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIPCLLL*SSQPLP
Trigger: AGGAAGTGGTTGAGATGAGCAAAGGAGAAGACACGG...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR GCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTTCCTCCCTCCTCCTTTaGAGTTTGGTTCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLSSLLL*SLVLVS
Trigger: GGAAACCAGAACCAAACTGCAAAGGAGGAGGGAGGA...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTTCCAGTTCTGGATACTaGCAATGGAAATGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSSSSGY*QWKWCL
Trigger: GAGACACCATTTCCATTGCCAGTATCCAGAACTGGA...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAATTTCGTTTTGCTTCTaGGCGAGGGTTTCATTGACG +
Preference number: 4 (lower is better)
Translates to: LLSRPFLLGCLHFCPYGRISFCF*ARVSLT
Trigger: CGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAAT...TCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACTCTTCTTCCTCTTGCTaGTTTGTGCTTCTCCGATAC +
Preference number: 4 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNSSSSC*FVLLRY
Trigger: GTATCGGAGAAGCACAAACCAGCAAGAGGAAGAAGA...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp CTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGATCTTCTTCCTCTTGCTaGTTTGTGCTTCTCCGATAC +
Preference number: 4 (lower is better)
Translates to: LLSRPFLLGCLHFCPYGRSSSSC*FVLLRY
Trigger: GTATCGGAGAAGCACAAACCAGCAAGAGGAAGAAGA...TCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTTGGCCTTCTTCTTCTTaGAGAGAGAGCTACGCTTGT +
Preference number: 4 (lower is better)
Translates to: TTKCRRETGKLRRETGKLWPSSS*RESYAC
Trigger: ACAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCA...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
3UTR CAA 72 bp AAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTaGGTGATAGAAAGTGTAAGCTGGTCCAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: KLRRETGKLRGP*VIESVSWSRIW
Trigger: CCAAATTCTGGACCAGCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAATTGGCAATCCAGTTCTaGATACTGGCAATGGAAATG +
Preference number: 4 (lower is better)
Translates to: TGKLRRETGKLRGPLVIELAIQF*ILAMEM
Trigger: CATTTCCATTGCCAGTATCCAGAACTGGATTGCCAA...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR TCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCCATCAATTTCTCATTaGGCTCCCGCAGTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLPSISH*APAVVL
Trigger: TAAAACAACTGCGGGAGCTCAATGAGAAATTGATGG...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CCA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTTTGGCAATCCAGTTCTaGATACTGGCAATGGAAATG +
Preference number: 4 (lower is better)
Translates to: FLLGCLHFCPYGRACITLLAIQF*ILAMEM
Trigger: CATTTCCATTGCCAGTATCCAGAACTGGATTGCCAA...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp AAGACGTTGGGCCACACCTCATCCACCTCATTCCGAGGGGCCTCTTaGCGGTCCTGGGTCAGCGCCCGCTGCAGGTCCAGCACACAGGGG +
Preference number: 5 (lower is better)
Translates to: KTLGHTSSTSFRGAS*RSWVSARCRSSTQG
Trigger: CCCCTGTGTGCTGGACCTGCAGCGGGCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAATGAGGTGGATGAGGTGTGGCCCAACGTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp GGCCACACCTCATCCACCTCATTCCGAGGGGCCTCTTGCCGGTCCTaGGTCAGCGCCCGCTGCAGGTCCAGCACACAGGGGGTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: GHTSSTSFRGASCRS*VSARCRSSTQGVLN
Trigger: GTTCAACACCCCCTGTGTGCTGGACCTGCAGCGGGCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAATGAGGTGGATGAGGTGTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp GGCCGCGGACGAGAATGCAGACAGGGGGATGCTCCTGCTGGCTGTTaGGCTGTCTGCCTCCCAGCTTCCCATGGACTGACTCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GRGRECRQGDAPAGC*AVCLPASHGLTLLQ
Trigger: CTGGAGGAGAGTCAGTCCATGGGAAGCTGGGAGGCAGACAGCTCAACAGCCAGCAGGAGCATCCCCCTGTCTGCATTCTCGTCCGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp CCTCCTTCTCGATCTCCACCAGCCTCTCGTTCCACATGTCCCAGGTaGTCTCCGAGGACTCCGAGTCAGAGCGGTATCTTCCGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PPSRSPPASRSTCPR*SPRTPSQSGIFRGG
Trigger: GCCGCCGCGGAAGATACCGCTCTGACTCGGAGTCCTCGGAGAGCACCTGGGACATGTGGAACGAGAGGCTGGTGGAGATCGAGAAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp CCTTCAGCCCTGGAGGTCAGCGAGCTGGTGGAGGACAGCACAGACTaGACGTCGGAGCTGGGTCTCCCTTGGCTTGGAGGTGGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: PSALEVSELVEDSTD*TSELGLPWLGGGKQ
Trigger: CTGCTTACCACCTCCAAGCCAAGGGAGACCCAGCTCCGACGTGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCTCCAGGGCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp AGGTCAGCGAGCTGGTGGAGGACAGCACAGACTGCACGTCGGAGCTaGGTCTCCCTTGGCTTGGAGGTGGTAAGCAGCCACTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RSASWWRTAQTARRS*VSLGLEVVSSHSGR
Trigger: CCTCCCTGAGTGGCTGCTTACCACCTCCAAGCCAAGGGAGACCCAGCTCCGACGTGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp TGGGCTTGCTGGTCCCCCTCACTTTGTTCCCACTGCCTTCAGCCCTaGAGGTCAGCGAGCTGGTGGAGGACAGCACAGACTGCACGTCGG +
Preference number: 5 (lower is better)
Translates to: WACWSPSLCSHCLQP*RSASWWRTAQTARR
Trigger: CCGACGTGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCTCCAGGGCTGAAGGCAGTGGGAACAAAGTGAGGGGGACCAGCAAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp ATCTTCCCAGTCCCTGGGCCTGGTCCAGTTTGGACGCCTTGGCTCTaGGGACTCCTCCCCATCAGAGGGTTCAGGGGTCCGGCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: IFPVPGPGPVWTPWL*GLLPIRGFRGPAEE
Trigger: TTCTTCCGCCGGACCCCTGAACCCTCTGATGGGGAGGAGTCCCCAGAGCCAAGGCGTCCAAACTGGACCAGGCCCAGGGACTGGGAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp CCGAGGACTCCGAGTCAGAGCGGTATCTTCCGCGGCGGCTTTGGGTaGTCCTCTCCAGTTGCTGCTTCAGGATCCGGATGTCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: PRTPSQSGIFRGGFG*SSPVAASGSGCHGC
Trigger: GCAGCCATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCCAAAGCCGCCGCGGAAGATACCGCTCTGACTCGGAGTCCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp CCCTGCCCCCTGCCTCTGAACAATCGCCATCCAGCTCCTCCCTCTTaGTCTTGGAGCGGTACTTCCGGGCAGCCTCCTTCTCGATCTCCA +
Preference number: 5 (lower is better)
Translates to: PCPLPLNNRHPAPPS*SWSGTSGQPPSRSP
Trigger: TGGAGATCGAGAAGGAGGCTGCCCGGAAGTACCGCTCCAAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAGAGGCAGGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CCCCTGCCTCTGAACAATCGCCATCCAGCTCCTCCCTCTTGCTCTTaGAGCGGTACTTCCGGGCAGCCTCCTTCTCGATCTCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: PLPLNNRHPAPPSCS*SGTSGQPPSRSPPA
Trigger: GGCTGGTGGAGATCGAGAAGGAGGCTGCCCGGAAGTACCGCTCCAAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAGAGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CAGAAGGGGCCGCGGACGAGAATGCAGACAGGGGGATGCTCCTGCTaGCTGTTGAGCTGTCTGCCTCCCAGCTTCCCATGGACTGACTCT +
Preference number: 5 (lower is better)
Translates to: QKGPRTRMQTGGCSC*LLSCLPPSFPWTDS
Trigger: AGAGTCAGTCCATGGGAAGCTGGGAGGCAGACAGCTCAACAGCCAGCAGGAGCATCCCCCTGTCTGCATTCTCGTCCGCGGCCCCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CCCTCACTTTGTTCCCACTGCCTTCAGCCCTGGAGGTCAGCGAGCTaGTGGAGGACAGCACAGACTGCACGTCGGAGCTGGGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: PSLCSHCLQPWRSAS*WRTAQTARRSWVSL
Trigger: AAGGGAGACCCAGCTCCGACGTGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCTCCAGGGCTGAAGGCAGTGGGAACAAAGTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CTCCCCATCAGAGGGTTCAGGGGTCCGGCGGAAGAAATAGGGTTCTaGGCTCTCCTCTCGGGAGCTCGAGGTCTCGCTGAATGTGGACCG +
Preference number: 5 (lower is better)
Translates to: LPIRGFRGPAEEIGF*ALLSGARGLAECGP
Trigger: CGGTCCACATTCAGCGAGACCTCGAGCTCCCGAGAGGAGAGCCCAGAACCCTATTTCTTCCGCCGGACCCCTGAACCCTCTGATGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp GGTCCTGGGTCAGCGCCCGCTGCAGGTCCAGCACACAGGGGGTGTTaGACAGGCTCCTGTCATCCATCTTCTCACGGACACGGTTGTACA +
Preference number: 5 (lower is better)
Translates to: GPGSAPAAGPAHRGC*TGSCHPSSHGHGCT
Trigger: TGTACAACCGTGTCCGTGAGAAGATGGATGACAGGAGCCTGTTCAACACCCCCTGTGTGCTGGACCTGCAGCGGGCGCTGACCCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp GGGCATGTTACTTGCATGAGAACGGTGGCTCTGGGTGCTGAGTACTaGCGCAGTGTCCCCATCCGCACTGACAGAAGGGGCCGCGGACGA +
Preference number: 5 (lower is better)
Translates to: GHVTCMRTVALGAEY*RSVPIRTDRRGRGR
Trigger: TCGTCCGCGGCCCCTTCTGTCAGTGCGGATGGGGACACTGCGTCAGTACTCAGCACCCAGAGCCACCGTTCTCATGCAAGTAACATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp AGAGGCTGTAGATGGGCTTGCTGGTCCCCCTCACTTTGTTCCCACTaGCTTCAGCCCTGGAGGTCAGCGAGCTGGTGGAGGACAGCACAG +
Preference number: 5 (lower is better)
Translates to: RGCRWACWSPSLCSH*LQPWRSASWWRTAQ
Trigger: CTGTGCTGTCCTCCACCAGCTCGCTGACCTCCAGGGCTGAAGGCAGTGGGAACAAAGTGAGGGGGACCAGCAAGCCCATCTACAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CTCTCCGAGGACTCCGAGTCAGAGCGGTATCTTCCGCGGCGGCTTTaGGTGCTCCTCTCCAGTTGCTGCTTCAGGATCCGGATGTCATGG +
Preference number: 5 (lower is better)
Translates to: LSEDSESERYLPRRL*VLLSSCCFRIRMSW
Trigger: CCATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCCAAAGCCGCCGCGGAAGATACCGCTCTGACTCGGAGTCCTCGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp GCTCCTTCAGGTCCACGTTGTCAGCAAAGAGGCTGTAGATGGGCTTaGTGGTCCCCCTCACTTTGTTCCCACTGCCTTCAGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: APSGPRCQQRGCRWA*WSPSLCSHCLQPWR
Trigger: CCTCCAGGGCTGAAGGCAGTGGGAACAAAGTGAGGGGGACCAGCAAGCCCATCTACAGCCTCTTTGCTGACAACGTGGACCTGAAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp AAGGCCGCAGGCTGCTGGAGCTGCCTTCATGCTTGCAACAGAGGGTaGGCGGGACAACAAGAGCATTTCGTTTTGCTTCTGGGCGAGGGT +
Preference number: 5 (lower is better)
Translates to: KAAGCWSCLHACNRG*AGQQEHFVLLLGEG
Trigger: ACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACCCTCTGTTGCAAGCATGAAGGCAGCTCCAGCAGCCTGCGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp GGCCAAGCTCCTTCAGGTCCACGTTGTCAGCAAAGAGGCTGTAGATaGGCTTGCTGGTCCCCCTCACTTTGTTCCCACTGCCTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: GQAPSGPRCQQRGCR*ACWSPSLCSHCLQP
Trigger: GGGCTGAAGGCAGTGGGAACAAAGTGAGGGGGACCAGCAAGCCCATCTACAGCCTCTTTGCTGACAACGTGGACCTGAAGGAGCTTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp GGGTGCTCCTCTCCAGTTGCTGCTTCAGGATCCGGATGTCATGGCTaGTCACACTCTCAGAAGCACTGCTCTCGCTTAGGGTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: GCSSPVAASGSGCHG*SHSQKHCSRLGCVC
Trigger: GCAGACACACCCTAAGCGAGAGCAGTGCTTCTGAGAGTGTGAGCAGCCATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp TCAGAGCGGTATCTTCCGCGGCGGCTTTGGGTGCTCCTCTCCAGTTaGTGCTTCAGGATCCGGATGTCATGGCTGCTCACACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SERYLPRRLWVLLSS*CFRIRMSWLLTLSE
Trigger: TTCTGAGAGTGTGAGCAGCCATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCCAAAGCCGCCGCGGAAGATACCGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CCTTCAGGTCCACGTTGTCAGCAAAGAGGCTGTAGATGGGCTTGCTaGTCCCCCTCACTTTGTTCCCACTGCCTTCAGCCCTGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PSGPRCQQRGCRWAC*SPSLCSHCLQPWRS
Trigger: TGACCTCCAGGGCTGAAGGCAGTGGGAACAAAGTGAGGGGGACCAGCAAGCCCATCTACAGCCTCTTTGCTGACAACGTGGACCTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CCGGCTTCTGGGAATTACTGCGAGAGGAGTACCGGAAGCTTCCGATaGCACTGTCTGTGTCCTCGTCTCTGTCACCCACGCTCATGTCCT +
Preference number: 5 (lower is better)
Translates to: PASGNYCERSTGSFR*HCLCPRLCHPRSCP
Trigger: AGGACATGAGCGTGGGTGACAGAGACGAGGACACAGACAGTGCCATCGGAAGCTTCCGGTACTCCTCTCGCAGTAATTCCCAGAAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp AGAAATAGGGTTCTGGGCTCTCCTCTCGGGAGCTCGAGGTCTCGCTaGATGTGGACCGAGAGAACTTGTGCATCTCTCTGGCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: RNRVLGSPLGSSRSR*MWTERTCASLWPPW
Trigger: CCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCACATTCAGCGAGACCTCGAGCTCCCGAGAGGAGAGCCCAGAACCCTATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp GCTTCAGGATCCGGATGTCATGGCTGCTCACACTCTCAGAAGCACTaGTCTCGCTTAGGGTGTGTCTGCGCCTTCTGCTGGAGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: ASGSGCHGCSHSQKH*SRLGCVCAFCWSRS
Trigger: ACTCCTACTCCAGCAGAAGGCGCAGACACACCCTAAGCGAGAGCAGTGCTTCTGAGAGTGTGAGCAGCCATGACATCCGGATCCTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp TGGCCAGAGAAGAGGAGGCATCTGTCTCCGGCTTCTGGGAATTACTaGGAGAGGAGTACCGGAAGCTTCCGATGGCACTGTCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: WPEKRRHLSPASGNY*ERSTGSFRWHCLCP
Trigger: AGGACACAGACAGTGCCATCGGAAGCTTCCGGTACTCCTCTCGCAGTAATTCCCAGAAGCCGGAGACAGATGCCTCCTCTTCTCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp TCTCGGGAGCTCGAGGTCTCGCTGAATGTGGACCGAGAGAACTTGTaGATCTCTCTGGCCTCCTTGGTGGTGGAAGATGAGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: SRELEVSLNVDRENL*ISLASLVVEDENRE
Trigger: CTCACGGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCACATTCAGCGAGACCTCGAGCTCCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp TTCTCCTCCTCCTCGTCATCAATAAGAGTGACTGGTTTGGAGACCTaGCTGGCCTTCCCCAAGGAGGAGCCACTCAGGTGGCTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: FSSSSSSIRVTGLET*LAFPKEEPLRWLVA
Trigger: TGCCACTAGCCACCTGAGTGGCTCCTCCTTGGGGAAGGCCAGCCAGGTCTCCAAACCAGTCACTCTTATTGATGACGAGGAGGAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGCCACCGAGTACTGGCTaGGGGAGGGACTCCGGAGAT +
Preference number: 5 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWPPSTG*GRDSGD
Trigger: ATCTCCGGAGTCCCTCCCCAAGCCAGTACTCGGTGG...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTATTCCGAGGGGCCTCTaGCCGGTCCTGGGTCAGCGC +
Preference number: 5 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTIPRGL*PVLGQR
Trigger: GCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAAT...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp GGCTGCTCACACTCTCAGAAGCACTGCTCTCGCTTAGGGTGTGTCTaGGCCTTCTGCTGGAGTAGGAGTTCTCTTCCTCCTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GCSHSQKHCSRLGCV*AFCWSRSSLPPLLP
Trigger: AGGAAGAAGAGGAGGAAGAGAACTCCTACTCCAGCAGAAGGCGCAGACACACCCTAAGCGAGAGCAGTGCTTCTGAGAGTGTGAGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp GTACAGGTCTTCCACCAGCAGTTGTTCAGCAGACTCCAGCATGCCTaGACACTCAGTGTCTGTTCTGAGCCCCCGAGGCTTGAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VQVFHQQLFSRLQHA*TLSVCSEPPRLEFF
Trigger: GAAGAACTCAAGCCTCGGGGGCTCAGAACAGACACTGAGTGTCCAGGCATGCTGGAGTCTGCTGAACAACTGCTGGTGGAAGACCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp GTCAGCAGAGCTTCGTCAAGGAACTCAGCTGCTTTCCGGAAATGTTaGGAGATGTCCACCTCTGGGAAGTCATCCACTTCCACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: VSRASSRNSAAFRKC*EMSTSGKSSTSTPR
Trigger: CCTGGGGGTGGAAGTGGATGACTTCCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCAGCTGAGTTCCTTGACGAAGCTCTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CTTTGGGTGCTCCTCTCCAGTTGCTGCTTCAGGATCCGGATGTCATaGCTGCTCACACTCTCAGAAGCACTGCTCTCGCTTAGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LWVLLSSCCFRIRMS*LLTLSEALLSLRVC
Trigger: ACACACCCTAAGCGAGAGCAGTGCTTCTGAGAGTGTGAGCAGCCATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp TGCTTCTGGGCGAGGGTTTCATTGACGACATTGGCAATCCAGTTCTaGATACTGGCAATGGAAATGGTGTCTCCAGGCCCCACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: CFWARVSLTTLAIQF*ILAMEMVSPGPTGR
Trigger: CCTGCCGGTGGGGCCTGGAGACACCATTTCCATTGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCGAGCTGCCTTCATGCTaGCAACAGAGGGTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLELPSC*QQRVGG
Trigger: CCCGCCCACCCTCTGTTGCAAGCATGAAGGCAGCTC...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCGAGCTGCCTTCATGCTaGCAACAGAGGGTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLELPSC*QQRVGG
Trigger: CCCGCCCACCCTCTGTTGCAAGCATGAAGGCAGCTC...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTTGGGTCTCCCTTGGCTaGGAGGTGGTAAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTWVSLG*EVVSSH
Trigger: GTGGCTGCTTACCACCTCCAAGCCAAGGGAGACCCA...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAATTCCGAGGGGCCTCTaGCCGGTCCTGGGTCAGCGC +
Preference number: 5 (lower is better)
Translates to: ETGKLRRETGKLRGPLVIIPRGL*PVLGQR
Trigger: GCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAAT...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGATCAGCTATGAAGACGTaGGGCCACACCTCATCCACC +
Preference number: 5 (lower is better)
Translates to: WQGEARITTEWITWVSLRSAMKT*GHTSST
Trigger: GGTGGATGAGGTGTGGCCCAACGTCTTCATAGCTGA...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCACTCTTGAGCCGCCCCTaGTTCACAGCCACGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LLSLLHPTVQALSTWMLALLSRP*FTATLF
Trigger: GAAAAGCGTGGCTGTGAACAAGGGGCGGCTCAAGAG...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTGGTGCTCCTCTCCAGTaGCTGCTTCAGGATCCGGAT +
Preference number: 5 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTGAPLQ*LLQDPD
Trigger: ATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACC...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTGCTCCTGCTGGCTGTaGAGCTGTCTGCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTCSCWL*SCLPPS
Trigger: GCTGGGAGGCAGACAGCTCAACAGCCAGCAGGAGCA...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGGGTCTCCCTTGGCTaGGAGGTGGTAAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAWVSLG*EVVSSH
Trigger: GTGGCTGCTTACCACCTCCAAGCCAAGGGAGACCCA...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp GCCACTCAGGTGGCTAGTGGCATCATCTTCTTCTTCCACCATCAGTaGATTGACTCTAGCACCCAGCATGCTCCCGGCATCTTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: ATQVASGIIFFFHHQ*IDSSTQHAPGIFLR
Trigger: TCTGAGGAAGATGCCGGGAGCATGCTGGGTGCTAGAGTCAATTCACTGATGGTGGAAGAAGAAGATGATGCCACTAGCCACCTGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp TTCATACAGCTTCTTCTCCTCCTCCTCGTCATCAATAAGAGTGACTaGTTTGGAGACCTGGCTGGCCTTCCCCAAGGAGGAGCCACTCAG +
Preference number: 5 (lower is better)
Translates to: FIQLLLLLLVINKSD*FGDLAGLPQGGATQ
Trigger: CTGAGTGGCTCCTCCTTGGGGAAGGCCAGCCAGGTCTCCAAACCAGTCACTCTTATTGATGACGAGGAGGAGGAGAAGAAGCTGTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp ATGTGGACCGAGAGAACTTGTGCATCTCTCTGGCCTCCTTGGTGGTaGAAGATGAGAACCGTGAGGTGTTTCGCACAGTGTCACCATTGG +
Preference number: 5 (lower is better)
Translates to: MWTERTCASLWPPWW*KMRTVRCFAQCHHW
Trigger: CCAATGGTGACACTGTGCGAAACACCTCACGGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp TGGCAGGGAGAGGCCAGAATCACAACAGAATGGATCACCTGGGTCTCATTGCGAATCTCTCTGGCCTCCTaGGTGGTGGAAGATGAGAAC +
Preference number: 5 (lower is better)
Translates to: WQGEARITTEWITWVSLRISLAS*VVEDEN
Trigger: GTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGAT...TCGCAATGAGACCCAGGTGATCCATTCTGTTGTGATTCTGGCCTCTCCCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGGGTTCTGGTTTCCTCTaGCCGCTTTCTCCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLGSGFL*PLSPGG
Trigger: GCCGCCTGGAGAAAGCGGCAAGAGGAAACCAGAACC...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp GTACCATGCTCACTGCCCCCGTCTCCCGCCTCCGAGTCTTTCTTGTaGAACCCAAATTGGATTCTCTTAATCTTCCACCTTTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: VPCSLPPSPASESFL*NPNWILLIFHLSRG
Trigger: TCCCCTGGAAAGGTGGAAGATTAAGAGAATCCAATTTGGGTTTCACAAGAAAGACTCGGAGGCGGGAGACGGGGGCAGTGAGCATGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp GACTTTCCCTCTGTAGGTCAGCAGAGCTTCGTCAAGGAACTCAGCTaGTTTCCGGAAATGTTGGGAGATGTCCACCTCTGGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: DFPSVGQQSFVKELS*FPEMLGDVHLWEVI
Trigger: GATGACTTCCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCAGCTGAGTTCCTTGACGAAGCTCTGCTGACCTACAGAGGGAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp CCATCTCGTTACCCATGCTGCGGCCATTTCTATAGTGATCAGAGATaGCCAGAGAAGAGGAGGCATCTGTCTCCGGCTTCTGGGAATTAC +
Preference number: 5 (lower is better)
Translates to: PSRYPCCGHFYSDQR*PEKRRHLSPASGNY
Trigger: GTAATTCCCAGAAGCCGGAGACAGATGCCTCCTCTTCTCTGGCCATCTCTGATCACTATAGAAATGGCCGCAGCATGGGTAACGAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp GATGAGAACCGTGAGGTGTTTCGCACAGTGTCACCATTGGCTTCGTaGAAGGAGGTGTCCTGCTCCTGTGACCTAGATTTGGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: DENREVFRTVSPLAS*KEVSCSCDLDLENL
Trigger: CAAGTTCTCCAAATCTAGGTCACAGGAGCAGGACACCTCCTTCCACGAAGCCAATGGTGACACTGTGCGAAACACCTCACGGTTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CATGAATGGCTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGCTTCATCCTCCTCGTTaGGAACTACCTGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: HEWLLSLLHPTVQALSTWLHPPR*ELPAPP
Trigger: AGGAGGAGCAGGTAGTTCCAAACGAGGAGGATGAAG...CCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAGCCATTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTCCACCGAGTACTGGCTaGGGGAGGGACTCCGGAGAT +
Preference number: 5 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPPPSTG*GRDSGD
Trigger: ATCTCCGGAGTCCCTCCCCAAGCCAGTACTCGGTGG...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACGTGATGCCCAGCCTCTaGAGCCGCCCCTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNVMPSL*SRPLFT
Trigger: TGTGAACAAGGGGCGGCTCAAGAGGCTGGGCATCAC...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGCTCGCGCCCTTTGGCTaGGTACCTCTCATTTCGGCT +
Preference number: 5 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLLAPFG*VPLISA
Trigger: AGCCGAAATGAGAGGTACCAAGCCAAAGGGCGCGAG...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCCACTGCTCGCGCCCTTaGGCTTGGTACCTCTCATTT +
Preference number: 5 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLHCSRP*AWYLSF
Trigger: AAATGAGAGGTACCAAGCCAAAGGGCGCGAGCAGTG...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTGCTCCTGCTGGCTGTaGAGCTGTCTGCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPCSCWL*SCLPPS
Trigger: GCTGGGAGGCAGACAGCTCAACAGCCAGCAGGAGCA...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp TGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCCACCCTACTTGGGCGAGGGTTTCATaGACGACATTGGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: WSRIWGSHEWLLSLLHPTWARVS*TTLAIQ
Trigger: CTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCA...AGTAGGGTGGAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 90 bp ATGCTTGCAACAGAGGGTGGGCGGGACAACAAGAGCATTTCGTTTTaGTTCTGGGCGAGGGTTTCATTGACGACATTGGCAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: MLATEGGRDNKSISF*FWARVSLTTLAIQF
Trigger: GAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACCCTCTGTTGCAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 90 bp GCAACAGAGGGTGGGCGGGACAACAAGAGCATTTCGTTTTGCTTCTaGGCGAGGGTTTCATTGACGACATTGGCAATCCAGTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: ATEGGRDNKSISFCF*ARVSLTTLAIQFWI
Trigger: TATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACCCTCTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTTCAGCTATGAAGACGTaGGGCCACACCTCATCCACC +
Preference number: 5 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTSAMKT*GHTSST
Trigger: GGTGGATGAGGTGTGGCCCAACGTCTTCATAGCTGA...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCATAAGAGTGACTGGTTaGGAGACCTGGCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLIRVTG*ETWLAF
Trigger: GAAGGCCAGCCAGGTCTCCAAACCAGTCACTCTTAT...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCATAAGAGTGACTGGTTaGGAGACCTGGCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLIRVTG*ETWLAF
Trigger: GAAGGCCAGCCAGGTCTCCAAACCAGTCACTCTTAT...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGGGCGAGGGTTTCATaGACGACATTGGCAATCCAG +
Preference number: 5 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAWARVS*TTLAIQ
Trigger: CTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCA...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCACAAGAGCATTTCGTTTaGCTTCTGGGCGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LLSLLHPTVQALSTWMLAQEHFV*LLGEGF
Trigger: GAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTG...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTGTGGACCGAGAGAACTaGTGCATCTCTCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSVDREN*CISLAS
Trigger: GGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCAC...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTGGTTCTGGTTTCCTCTaGCCGCTTTCTCCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPGSGFL*PLSPGG
Trigger: GCCGCCTGGAGAAAGCGGCAAGAGGAAACCAGAACC...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp TGTCACCCACGCTCATGTCCTCGTCATCCTTGGCCTTCTTCTTCTTaGAGAGAGAGCTACGCTTGTTATCAGAGGCCAGCTTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: CHPRSCPRHPWPSSS*RESYACYQRPASPF
Trigger: AAATGGAGAAGCTGGCCTCTGATAACAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAAGGATGACGAGGACATGAGCGTGGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTGTGATGCCCAGCCTCTaGAGCCGCCCCTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: TTKCRRETGKLRRETGKLVMPSL*SRPLFT
Trigger: TGTGAACAAGGGGCGGCTCAAGAGGCTGGGCATCAC...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTCTCCTGCAGCTCCATTaGCATCTCTTTCTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTLLQLH*HLFLLP
Trigger: CGGAAGGAGAAAGAGATGCAAATGGAGCTGCAGGAG...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTCTTCTCAAGAGAGAGCTACGCTaGTTATCAGAGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SVSWSRIWGSHEWLLSLLKRELR*LSEASF
Trigger: GAAGCTGGCCTCTGATAACAAGCGTAGCTCTCTCTT...GAGAAGAGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGTGGACCGAGAGAACTaGTGCATCTCTCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEVDREN*CISLAS
Trigger: GGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCAC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGAGAACCACAGCCTGCAAGTCAGGTCTTTCTCAGTGGCTTTGTAGACTCACTCTTCCTCTTGCTGGTTaGTGCTTCTCCGATACTGGG +
Preference number: 5 (lower is better)
Translates to: KRTTACKSGLSQWLCRLTLPLAG*CFSDTG
Trigger: CCCAGTATCGGAGAAGCACAAACCAGCAAGAGGAAG...AGTGAGTCTACAAAGCCACTGAGAAAGACCTGACTTGCAGGCTGTGGTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp CACAGTGTCACCATTGGCTTCGTGGAAGGAGGTGTCCTGCTCCTGTaGCCTAGATTTGGAGAACTTGTAACTGCAGGATTTAGACTCTGT +
Preference number: 5 (lower is better)
Translates to: HSVTIGFVEGGVLLL*PRFGELVTAGFRLC
Trigger: ACAGAGTCTAAATCCTGCAGTTACAAGTTCTCCAAATCTAGGTCACAGGAGCAGGACACCTCCTTCCACGAAGCCAATGGTGACACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACGTCTTCCACCAGCAGTaGTTCAGCAGACTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNVFHQQ*FSRLQH
Trigger: ATGCTGGAGTCTGCTGAACAACTGCTGGTGGAAGAC...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTCTCTTGAGCCGCCCCTaGTTCACAGCCACGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TTKCRRETGKLRRETGKLLLSRP*FTATLF
Trigger: GAAAAGCGTGGCTGTGAACAAGGGGCGGCTCAAGAG...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTTGCTTTCCGGAAATGTaGGGAGATGTCCACCTCTGG +
Preference number: 5 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSCFPEM*GDVHLW
Trigger: CCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCA...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTGGTGCTCCTCTCCAGTaGCTGCTTCAGGATCCGGAT +
Preference number: 5 (lower is better)
Translates to: FLLGCLHFCPYGRACITLGAPLQ*LLQDPD
Trigger: ATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACC...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GTGATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGGGAGTGAGCTTGTCCTaGTTCCTACTGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VIESVSWSRIWGSHEWLLGVSLS*FLLQKL
Trigger: CAACTTCTGCAGTAGGAACAAGGACAAGCTCACTCC...CAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp AAGCTGTTCCCAAGCCCAGTGTTAAATGGCTTCTTTCCGTGTTCCCAGTGTCTCTTGGCCTTCTTCTTCTaGAAGAGAGAGCTACGCTTG +
Preference number: 5 (lower is better)
Translates to: KLFPSPVLNGFFPCSQCLLAFFF*KRELRL
Trigger: CAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAA...GAGACACTGGGAACACGGAAAGAAGCCATTTAACACTGGGCTTGGGAACAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTCTTGTCTCTTCTCCACCCTACTGTCCAGGCCCTTTCTACTTGGATGCTTGCATCCGGACCAATCACTTaGAGGAGGAGATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLSLLHPTVQALSTWMLASGPIT*RRRFFF
Trigger: GAAGAAAAATCTCCTCCTCAAAGTGATTGGTCCGGA...TGCAAGCATCCAAGTAGAAAGGGCCTGGACAGTAGGGTGGAGAAGAGACAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 90 bp GGGACAACAAGAGCATTTCGTTTTGCTTCTGGGCGAGGGTTTCATTaGCGACATTGGCAATCCAGTTCTGGATACTGGCAATGGAAATGG +
Preference number: 5 (lower is better)
Translates to: GTTRAFRFASGRGFH*RHWQSSSGYWQWKW
Trigger: CCATTTCCATTGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAACTTCATCCTCCTCGTTaGGAACTACCTGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: TGKLRRETGKLRGPLVIELHPPR*ELPAPP
Trigger: AGGAGGAGCAGGTAGTTCCAAACGAGGAGGATGAAG...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATATGCTTTCCGGAAATGTaGGGAGATGTCCACCTCTGG +
Preference number: 5 (lower is better)
Translates to: ETGKLRRETGKLRGPLVICFPEM*GDVHLW
Trigger: CCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCA...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACTACCAAATGCAGAAGGGAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTCACTGCTCGCGCCCTTaGGCTTGGTACCTCTCATTT +
Preference number: 5 (lower is better)
Translates to: TTKCRRETGKLRRETGKLHCSRP*AWYLSF
Trigger: AAATGAGAGGTACCAAGCCAAAGGGCGCGAGCAGTG...AAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTCCCTTCTGCATTTGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTCTCCTGCAGCTCCATTaGCATCTCTTTCTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPLLQLH*HLFLLP
Trigger: CGGAAGGAGAAAGAGATGCAAATGGAGCTGCAGGAG...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTATCTCTCTGGCCTCCTaGGTGGTGGAAGATGAGAAC +
Preference number: 5 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPISLAS*VVEDEN
Trigger: GTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGAT...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTGGGTGAATTTCCTCTaGGCCCCAAACTCAGCGAAG +
Preference number: 5 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPWVNFL*APNSAK
Trigger: CTTCGCTGAGTTTGGGGCCAAGAGGAAATTCACCCA...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAGGAGTGAGCTTGTCCTaGTTCCTACTGCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEGVSLS*FLLQKL
Trigger: CAACTTCTGCAGTAGGAACAAGGACAAGCTCACTCC...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAACCGTGTCTTCTCCTTaGCTCATCTCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: ETGKLRRETGKLRGPLVITVSSP*LISTTS
Trigger: GGAAGTGGTTGAGATGAGCAAAGGAGAAGACACGGT...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAACCGTGTCTTCTCCTTaGCTCATCTCAACCACTTCC +
Preference number: 5 (lower is better)
Translates to: TGKLRRETGKLRGPLVIETVSSP*LISTTS
Trigger: GGAAGTGGTTGAGATGAGCAAAGGAGAAGACACGGT...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCGTTTCATTGACGACATaGGCAATCCAGTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRAVSLTT*AIQFWI
Trigger: TATCCAGAACTGGATTGCCAATGTCGTCAATGAAAC...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAACAAGAGCATTTCGTTTaGCTTCTGGGCGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: TGKLRRETGKLRGPLVIEQEHFV*LLGEGF
Trigger: GAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTG...TTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATAGAAAGTGTAAGCAAGAGAGAGCTACGCTaGTTATCAGAGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LRRETGKLRGPLVIESVSKRELR*LSEASF
Trigger: GAAGCTGGCCTCTGATAACAAGCGTAGCTCTCTCTT...GCTTACACTTTCTATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp ATAGAAAGTGTAAGCTGGTCCAGAATTTGGGGCTCGCATGAATGGCTCTTGTCTTTGGCCTTCTTCTTCTaGAAGAGAGAGCTACGCTTG +
Preference number: 5 (lower is better)
Translates to: IESVSWSRIWGSHEWLLSLAFFF*KRELRL
Trigger: CAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAA...AGACAAGAGCCATTCATGCGAGCCCCAAATTCTGGACCAGCTTACACTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTGTCCAGGCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCAGCCACGTATTAATATaGCTATCCATCTCGTTACCC +
Preference number: 5 (lower is better)
Translates to: LSRPFLLGCLHFCPYGRASHVLI*LSISLP
Trigger: GGGTAACGAGATGGATAGCAATATTAATACGTGGCT...GGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGCCTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GTCTCATTGCGAAACCTCAATGAAGAGAACCACAGCCTGCAAGTCAGGTCTTTCAGCCACGTATTAATATaGCTATCCATCTCGTTACCC +
Preference number: 5 (lower is better)
Translates to: VSLRNLNEENHSLQVRSFSHVLI*LSISLP
Trigger: GGGTAACGAGATGGATAGCAATATTAATACGTGGCT...GAAAGACCTGACTTGCAGGCTGTGGTTCTCTTCATTGAGGTTTCGCAATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GCCCTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACGTTTCATTGACGACATaGGCAATCCAGTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: ALSTWMLAFLPIWKSLHNVSLTT*AIQFWI
Trigger: TATCCAGAACTGGATTGCCAATGTCGTCAATGAAAC...GTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp CTTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTCCGGACCAATCACTTaGAGGAGGAGATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LSTWMLAFLPIWKSLHNPSGPIT*RRRFFF
Trigger: GAAGAAAAATCTCCTCCTCAAAGTGATTGGTCCGGA...AGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp GAAACAGGAAAGCTTAGAAGGGAAACAGGAAAGCTTAGAGGGCCTTTGGTGATATCCATCAATTTCTCATaGAGCTCCCGCAGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: ETGKLRRETGKLRGPLVISINFS*SSRSCF
Trigger: AAAACAACTGCGGGAGCTCAATGAGAAATTGATGGA...TATCACCAAAGGCCCTCTAAGCTTTCCTGTTTCCCTTCTAAGCTTTCCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS-3UTR CAA 90 bp TTTCTACTTGGATGCTTGCATTTTTGCCCATATGGAAGAGCCTGCATAACCCTTTCCATCAATTTCTCATaGAGCTCCCGCAGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: FLLGCLHFCPYGRACITLSINFS*SSRSCF
Trigger: AAAACAACTGCGGGAGCTCAATGAGAAATTGATGGA...AAGGGTTATGCAGGCTCTTCCATATGGGCAAAAATGCAAGCATCCAAGTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp GGCCACACCTCATCCACCTCATTCCGAGGGGCCTCTTaGCGGTCCTGGGTCAGCGCCCGCTGCAGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GHTSSTSFRGAS*RSWVSARCRSS
Trigger: GCTGGACCTGCAGCGGGCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAATGAGGTGGATGAGGTGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp GGGCCACACCTCATCCACCTCATTCCGAGGGGCCTCTaGCCGGTCCTGGGTCAGCGCCCGCTGCAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GPHLIHLIPRGL*PVLGQRPLQVQ
Trigger: CTGGACCTGCAGCGGGCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAATGAGGTGGATGAGGTGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TCATCCACCTCATTCCGAGGGGCCTCTTGCCGGTCCTaGGTCAGCGCCCGCTGCAGGTCCAGCACACAGGGG +
Preference number: 6 (lower is better)
Translates to: SSTSFRGASCRS*VSARCRSSTQG
Trigger: CCCCTGTGTGCTGGACCTGCAGCGGGCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAATGAGGTGGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp GAAGACGTTGGGCCACACCTCATCCACCTCATTCCGAGGGGCCTCTaGCCGGTCCTGGGTCAGCGCCCGCTGCAGGTCCAGCACACAGGG +
Preference number: 6 (lower is better)
Translates to: EDVGPHLIHLIPRGL*PVLGQRPLQVQHTG
Trigger: CCCTGTGTGCTGGACCTGCAGCGGGCGCTGACCCAGGACCGGCAAGAGGCCCCTCGGAATGAGGTGGATGAGGTGTGGCCCAACGTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GTCCCTGGGCCTGGTCCAGTTTGGACGCCTTGGCTCTaGGGACTCCTCCCCATCAGAGGGTTCAGGGGTCCG +
Preference number: 6 (lower is better)
Translates to: VPGPGPVWTPWL*GLLPIRGFRGP
Trigger: CGGACCCCTGAACCCTCTGATGGGGAGGAGTCCCCAGAGCCAAGGCGTCCAAACTGGACCAGGCCCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp CTGGAGGTCAGCGAGCTGGTGGAGGACAGCACAGACTaGACGTCGGAGCTGGGTCTCCCTTGGCTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: LEVSELVEDSTD*TSELGLPWLGG
Trigger: ACCTCCAAGCCAAGGGAGACCCAGCTCCGACGTGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp CCGCGGACGAGAATGCAGACAGGGGGATGCTCCTGCTaGCTGTTGAGCTGTCTGCCTCCCAGCTTCCCATGG +
Preference number: 6 (lower is better)
Translates to: PRTRMQTGGCSC*LLSCLPPSFPW
Trigger: CCATGGGAAGCTGGGAGGCAGACAGCTCAACAGCCAGCAGGAGCATCCCCCTGTCTGCATTCTCGTCCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TGTTCCCACTGCCTTCAGCCCTGGAGGTCAGCGAGCTaGTGGAGGACAGCACAGACTGCACGTCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: CSHCLQPWRSAS*WRTAQTARRSW
Trigger: CCAGCTCCGACGTGCAGTCTGTGCTGTCCTCCACCAGCTCGCTGACCTCCAGGGCTGAAGGCAGTGGGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp GGGCCGCGGACGAGAATGCAGACAGGGGGATGCTCCTGCTGGCTGTaGAGCTGTCTGCCTCCCAGCTTCCCATGGACTGACTCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: GPRTRMQTGGCSCWL*SCLPPSFPWTDSPP
Trigger: TGGAGGAGAGTCAGTCCATGGGAAGCTGGGAGGCAGACAGCTCAACAGCCAGCAGGAGCATCCCCCTGTCTGCATTCTCGTCCGCGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp CGGTCCTGGGTCAGCGCCCGCTGCAGGTCCAGCACACAGGGGGTGTaGAACAGGCTCCTGTCATCCATCTTCTCACGGACACGGTTGTAC +
Preference number: 6 (lower is better)
Translates to: RSWVSARCRSSTQGV*NRLLSSIFSRTRLY
Trigger: GTACAACCGTGTCCGTGAGAAGATGGATGACAGGAGCCTGTTCAACACCCCCTGTGTGCTGGACCTGCAGCGGGCGCTGACCCAGGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp CCCCCTGCCTCTGAACAATCGCCATCCAGCTCCTCCCTCTTGCTCTaGGAGCGGTACTTCCGGGCAGCCTCCTTCTCGATCTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: PPASEQSPSSSSLLL*ERYFRAASFSISTS
Trigger: GCTGGTGGAGATCGAGAAGGAGGCTGCCCGGAAGTACCGCTCCAAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAGAGGCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp ACCCTGCCCCCTGCCTCTGAACAATCGCCATCCAGCTCCTCCCTCTaGCTCTTGGAGCGGTACTTCCGGGCAGCCTCCTTCTCGATCTCC +
Preference number: 6 (lower is better)
Translates to: TLPPASEQSPSSSSL*LLERYFRAASFSIS
Trigger: GGAGATCGAGAAGGAGGCTGCCCGGAAGTACCGCTCCAAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAGAGGCAGGGGGCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GACAGCACAGACTGCACGTCGGAGCTGGGTCTCCCTTaGCTTGGAGGTGGTAAGCAGCCACTCAGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: DSTDCTSELGLP*LGGGKQPLREV
Trigger: CACCTCCCTGAGTGGCTGCTTACCACCTCCAAGCCAAGGGAGACCCAGCTCCGACGTGCAGTCTGTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp AGCTGGTGGAGGACAGCACAGACTGCACGTCGGAGCTaGGTCTCCCTTGGCTTGGAGGTGGTAAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: SWWRTAQTARRS*VSLGLEVVSSH
Trigger: GTGGCTGCTTACCACCTCCAAGCCAAGGGAGACCCAGCTCCGACGTGCAGTCTGTGCTGTCCTCCACCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp GCTCTCCGAGGACTCCGAGTCAGAGCGGTATCTTCCGCGGCGGCTTaGGGTGCTCCTCTCCAGTTGCTGCTTCAGGATCCGGATGTCATG +
Preference number: 6 (lower is better)
Translates to: ALRGLRVRAVSSAAA*GAPLQLLLQDPDVM
Trigger: CATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCCAAAGCCGCCGCGGAAGATACCGCTCTGACTCGGAGTCCTCGGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp TCAGCGCCCGCTGCAGGTCCAGCACACAGGGGGTGTTaGACAGGCTCCTGTCATCCATCTTCTCACGGACAC +
Preference number: 6 (lower is better)
Translates to: SAPAAGPAHRGC*TGSCHPSSHGH
Trigger: GTGTCCGTGAGAAGATGGATGACAGGAGCCTGTTCAACACCCCCTGTGTGCTGGACCTGCAGCGGGCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp CTCCTCATCGTCCTCTCGGACCCTGCCCCCTGCCTCTaGACAATCGCCATCCAGCTCCTCCCTCTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: LLIVLSDPAPCL*TIAIQLLPLAL
Trigger: AAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAGAGGCAGGGGGCAGGGTCCGAGAGGACGATGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp CCGAGTCAGAGCGGTATCTTCCGCGGCGGCTTTGGGTaGTCCTCTCCAGTTGCTGCTTCAGGATCCGGATGT +
Preference number: 6 (lower is better)
Translates to: PSQSGIFRGGFG*SSPVAASGSGC
Trigger: ACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCCAAAGCCGCCGCGGAAGATACCGCTCTGACTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp CAGACAACACGCTCTCCTCATCGTCCTCTCGGACCCTaGCCCCTGCCTCTGAACAATCGCCATCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: QTTRSPHRPLGP*PLPLNNRHPAP
Trigger: AGGAGCTGGATGGCGATTGTTCAGAGGCAGGGGGCAGGGTCCGAGAGGACGATGAGGAGAGCGTGTTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp AGAGGGTTCAGGGGTCCGGCGGAAGAAATAGGGTTCTaGGCTCTCCTCTCGGGAGCTCGAGGTCTCGCTGAA +
Preference number: 6 (lower is better)
Translates to: RGFRGPAEEIGF*ALLSGARGLAE
Trigger: TTCAGCGAGACCTCGAGCTCCCGAGAGGAGAGCCCAGAACCCTATTTCTTCCGCCGGACCCCTGAACCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp GTCAGCGCCCGCTGCAGGTCCAGCACACAGGGGGTGTaGAACAGGCTCCTGTCATCCATCTTCTCACGGACA +
Preference number: 6 (lower is better)
Translates to: VSARCRSSTQGV*NRLLSSIFSRT
Trigger: TGTCCGTGAGAAGATGGATGACAGGAGCCTGTTCAACACCCCCTGTGTGCTGGACCTGCAGCGGGCGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp CCCCAAGGCCGCAGGCTGCTGGAGCTGCCTTCATGCTaGCAACAGAGGGTGGGCGGGACAACAAGAGCATTT +
Preference number: 6 (lower is better)
Translates to: PQGRRLLELPSC*QQRVGGTTRAF
Trigger: AAATGCTCTTGTTGTCCCGCCCACCCTCTGTTGCAAGCATGAAGGCAGCTCCAGCAGCCTGCGGCCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp CTTCTACATCTTCCCAGTCCCTGGGCCTGGTCCAGTTaGGACGCCTTGGCTCTGGGGACTCCTCCCCATCAG +
Preference number: 6 (lower is better)
Translates to: LLHLPSPWAWSS*DALALGTPPHQ
Trigger: CTGATGGGGAGGAGTCCCCAGAGCCAAGGCGTCCAAACTGGACCAGGCCCAGGGACTGGGAAGATGTAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp ACTTGCATGAGAACGGTGGCTCTGGGTGCTGAGTACTaGCGCAGTGTCCCCATCCGCACTGACAGAAGGGGC +
Preference number: 6 (lower is better)
Translates to: TCMRTVALGAEY*RSVPIRTDRRG
Trigger: GCCCCTTCTGTCAGTGCGGATGGGGACACTGCGTCAGTACTCAGCACCCAGAGCCACCGTTCTCATGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp CGATCTCCACCAGCCTCTCGTTCCACATGTCCCAGGTaGTCTCCGAGGACTCCGAGTCAGAGCGGTATCTTC +
Preference number: 6 (lower is better)
Translates to: RSPPASRSTCPR*SPRTPSQSGIF
Trigger: GAAGATACCGCTCTGACTCGGAGTCCTCGGAGAGCACCTGGGACATGTGGAACGAGAGGCTGGTGGAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp CTGCCTCTGAACAATCGCCATCCAGCTCCTCCCTCTTaGTCTTGGAGCGGTACTTCCGGGCAGCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: LPLNNRHPAPPS*SWSGTSGQPPS
Trigger: AGAAGGAGGCTGCCCGGAAGTACCGCTCCAAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp AGGTTCTTCTCTCCTGCTGCTGCCTCTTCTGTACCATaGTCACTGCCCCCGTCTCCCGCCTCCGAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: RFFSPAAASSVP*SLPPSPASESF
Trigger: GAAAGACTCGGAGGCGGGAGACGGGGGCAGTGAGCATGGTACAGAAGAGGCAGCAGCAGGAGAGAAGAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp AGCTACGTCCCTTTCTACCCTGAGCAGCCTCCCCCTTaGGGAAGCCCTGCCCCTTCCTCCACTCTTCATACA +
Preference number: 6 (lower is better)
Translates to: SYVPFYPEQPPP*GSPAPSSTLHT
Trigger: TGTATGAAGAGTGGAGGAAGGGGCAGGGCTTCCCCAAGGGGGAGGCTGCTCAGGGTAGAAAGGGACGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TGCTGGCTGTTGAGCTGTCTGCCTCCCAGCTTCCCATaGACTGACTCTCCTCCAGTGTCTGCCTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: CWLLSCLPPSFP*TDSPPVSACSS
Trigger: AGAGGAGCAGGCAGACACTGGAGGAGAGTCAGTCCATGGGAAGCTGGGAGGCAGACAGCTCAACAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TTCTACATCTTCCCAGTCCCTGGGCCTGGTCCAGTTTaGACGCCTTGGCTCTGGGGACTCCTCCCCATCAGA +
Preference number: 6 (lower is better)
Translates to: FYIFPVPGPGPV*TPWLWGLLPIR
Trigger: TCTGATGGGGAGGAGTCCCCAGAGCCAAGGCGTCCAAACTGGACCAGGCCCAGGGACTGGGAAGATGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp TTTCGGTTTCTGCCTCTGAGACCACCGAGTACTGGCTaGGGGAGGGACTCCGGAGATAGCGGGCCTGTACAG +
Preference number: 6 (lower is better)
Translates to: FRFLPLRPPSTG*GRDSGDSGPVQ
Trigger: CTGTACAGGCCCGCTATCTCCGGAGTCCCTCCCCAAGCCAGTACTCGGTGGTCTCAGAGGCAGAAACCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp GATGGGCTCCATGAAGATGCTTTCGGTTTCTGCCTCTaGGACCACCGAGTACTGGCTTGGGGAGGGACTCCG +
Preference number: 6 (lower is better)
Translates to: DGLHEDAFGFCL*DHRVLAWGGTP
Trigger: CGGAGTCCCTCCCCAAGCCAGTACTCGGTGGTCTCAGAGGCAGAAACCGAAAGCATCTTCATGGAGCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp TGGCAGCTACAGCCGAGGAGAGGTGGATGGGCTCCATaGAGATGCTTTCGGTTTCTGCCTCTGAGACCACCG +
Preference number: 6 (lower is better)
Translates to: WQLQPRRGGWAP*RCFRFLPLRPP
Trigger: CGGTGGTCTCAGAGGCAGAAACCGAAAGCATCTTCATGGAGCCCATCCACCTCTCCTCGGCTGTAGCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp GTTCTGGGCTCTCCTCTCGGGAGCTCGAGGTCTCGCTaGATGTGGACCGAGAGAACTTGTGCATCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VLGSPLGSSRSR*MWTERTCASLW
Trigger: CCAGAGAGATGCACAAGTTCTCTCGGTCCACATTCAGCGAGACCTCGAGCTCCCGAGAGGAGAGCCCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp TCCGGATGTCATGGCTGCTCACACTCTCAGAAGCACTaGTCTCGCTTAGGGTGTGTCTGCGCCTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SGCHGCSHSQKH*SRLGCVCAFCW
Trigger: CCAGCAGAAGGCGCAGACACACCCTAAGCGAGAGCAGTGCTTCTGAGAGTGTGAGCAGCCATGACATCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp TATCTTCCGCGGCGGCTTTGGGTGCTCCTCTCCAGTTaGTGCTTCAGGATCCGGATGTCATGGCTGCTCACA +
Preference number: 6 (lower is better)
Translates to: YLPRRLWVLLSS*CFRIRMSWLLT
Trigger: TGTGAGCAGCCATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAGCACCCAAAGCCGCCGCGGAAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp CTGAACAATCGCCATCCAGCTCCTCCCTCTTGCTCTTaGAGCGGTACTTCCGGGCAGCCTCCTTCTCGATCT +
Preference number: 6 (lower is better)
Translates to: LNNRHPAPPSCS*SGTSGQPPSRS
Trigger: AGATCGAGAAGGAGGCTGCCCGGAAGTACCGCTCCAAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GGGAATTACTGCGAGAGGAGTACCGGAAGCTTCCGATaGCACTGTCTGTGTCCTCGTCTCTGTCACCCACGC +
Preference number: 6 (lower is better)
Translates to: GNYCERSTGSFR*HCLCPRLCHPR
Trigger: GCGTGGGTGACAGAGACGAGGACACAGACAGTGCCATCGGAAGCTTCCGGTACTCCTCTCGCAGTAATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp TCTGAACAATCGCCATCCAGCTCCTCCCTCTTGCTCTaGGAGCGGTACTTCCGGGCAGCCTCCTTCTCGATC +
Preference number: 6 (lower is better)
Translates to: SEQSPSSSSLLL*ERYFRAASFSI
Trigger: GATCGAGAAGGAGGCTGCCCGGAAGTACCGCTCCAAGAGCAAGAGGGAGGAGCTGGATGGCGATTGTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp TCCTCTCGGGAGCTCGAGGTCTCGCTGAATGTGGACCGAGAGAACTaGTGCATCTCTCTGGCCTCCTTGGTGGTGGAAGATGAGAACCGT +
Preference number: 6 (lower is better)
Translates to: SSRELEVSLNVDREN*CISLASLVVEDENR
Trigger: ACGGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCACATTCAGCGAGACCTCGAGCTCCCGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp GCCGCCCCTTGTTCACAGCCACGCTTTTCTCAGCTATaGAGACGTTGGGCCACACCTCATCCACCTCATTCC +
Preference number: 6 (lower is better)
Translates to: AAPCSQPRFSQL*RRWATPHPPHS
Trigger: GGAATGAGGTGGATGAGGTGTGGCCCAACGTCTTCATAGCTGAGAAAAGCGTGGCTGTGAACAAGGGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp GGTGCTTCAGCTTCCAGGCCTGGTAGGCTGTCAGGTTaGCATCAGAGAGGTTCTTCTCTCCTGCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: GASASRPGRLSG*HQRGSSLLLLP
Trigger: AGGCAGCAGCAGGAGAGAAGAACCTCTCTGATGTCAACCTGACAGCCTACCAGGCCTGGAAGCTGAAGCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp CAGGTTGACATCAGAGAGGTTCTTCTCTCCTGCTGCTaGCTCTTCTGTACCATGCTCACTGCCCCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: QVDIREVLLSCC*LFCTMLTAPVS
Trigger: GGAGACGGGGGCAGTGAGCATGGTACAGAAGAGGCAGCAGCAGGAGAGAAGAACCTCTCTGATGTCAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TTCCACCAGCAGTTGTTCAGCAGACTCCAGCATGCCTaGACACTCAGTGTCTGTTCTGAGCCCCCGAGGCTT +
Preference number: 6 (lower is better)
Translates to: FHQQLFSRLQHA*TLSVCSEPPRL
Trigger: AAGCCTCGGGGGCTCAGAACAGACACTGAGTGTCCAGGCATGCTGGAGTCTGCTGAACAACTGCTGGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp CCTTCAGGTCCACGTTGTCAGCAAAGAGGCTGTAGATaGGCTTGCTGGTCCCCCTCACTTTGTTCCCACTGC +
Preference number: 6 (lower is better)
Translates to: PSGPRCQQRGCR*ACWSPSLCSHC
Trigger: GCAGTGGGAACAAAGTGAGGGGGACCAGCAAGCCCATCTACAGCCTCTTTGCTGACAACGTGGACCTGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp ATGGCCAGAGAAGAGGAGGCATCTGTCTCCGGCTTCTaGGAATTACTGCGAGAGGAGTACCGGAAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: MAREEEASVSGF*ELLREEYRKLP
Trigger: CGGAAGCTTCCGGTACTCCTCTCGCAGTAATTCCCAGAAGCCGGAGACAGATGCCTCCTCTTCTCTGGCCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp GGTCAGCAGAGCTTCGTCAAGGAACTCAGCTGCTTTCCGGAAATGTaGGGAGATGTCCACCTCTGGGAAGTCATCCACTTCCACCCCCAG +
Preference number: 6 (lower is better)
Translates to: GQQSFVKELSCFPEM*GDVHLWEVIHFHPQ
Trigger: CTGGGGGTGGAAGTGGATGACTTCCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCAGCTGAGTTCCTTGACGAAGCTCTGCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp TACAGCTTCTTCTCCTCCTCCTCGTCATCAATAAGAGTGACTGGTTaGGAGACCTGGCTGGCCTTCCCCAAGGAGGAGCCACTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: YSFFSSSSSSIRVTG*ETWLAFPKEEPLRW
Trigger: CCACCTGAGTGGCTCCTCCTTGGGGAAGGCCAGCCAGGTCTCCAAACCAGTCACTCTTATTGATGACGAGGAGGAGGAGAAGAAGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp ACTCCGGAGATAGCGGGCCTGTACAGCTCTCACATCTaGTTCATCCTCCTCGTTTGGAACTACCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: TPEIAGLYSSHI*FILLVWNYLLL
Trigger: GAGGAGCAGGTAGTTCCAAACGAGGAGGATGAAGCAGATGTGAGAGCTGTACAGGCCCGCTATCTCCGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp TCTCCAGTTGCTGCTTCAGGATCCGGATGTCATGGCTaGTCACACTCTCAGAAGCACTGCTCTCGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: SPVAASGSGCHG*SHSQKHCSRLG
Trigger: CCCTAAGCGAGAGCAGTGCTTCTGAGAGTGTGAGCAGCCATGACATCCGGATCCTGAAGCAGCAACTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp TGTCAGGTTGACATCAGAGAGGTTCTTCTCTCCTGCTaGTGCCTCTTCTGTACCATGCTCACTGCCCCCGTC +
Preference number: 6 (lower is better)
Translates to: CQVDIREVLLSC*CLFCTMLTAPV
Trigger: GACGGGGGCAGTGAGCATGGTACAGAAGAGGCAGCAGCAGGAGAGAAGAACCTCTCTGATGTCAACCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp AGCTTCCCATGGACTGACTCTCCTCCAGTGTCTGCCTaGTCCTCTCCAGTAACTCTAGTCTCCGCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: SFPWTDSPPVSA*SSPVTLVSAVS
Trigger: AGAGACAGCGGAGACTAGAGTTACTGGAGAGGAGCAGGCAGACACTGGAGGAGAGTCAGTCCATGGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp AAGAGGAGGCATCTGTCTCCGGCTTCTGGGAATTACTaGGAGAGGAGTACCGGAAGCTTCCGATGGCACTGT +
Preference number: 6 (lower is better)
Translates to: KRRHLSPASGNY*ERSTGSFRWHC
Trigger: ACAGTGCCATCGGAAGCTTCCGGTACTCCTCTCGCAGTAATTCCCAGAAGCCGGAGACAGATGCCTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp CTCCTCTCCAGTTGCTGCTTCAGGATCCGGATGTCATaGCTGCTCACACTCTCAGAAGCACTGCTCTCGCTT +
Preference number: 6 (lower is better)
Translates to: LLSSCCFRIRMS*LLTLSEALLSL
Trigger: AAGCGAGAGCAGTGCTTCTGAGAGTGTGAGCAGCCATGACATCCGGATCCTGAAGCAGCAACTGGAGAGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GGCTGCTGGAGCTGCCTTCATGCTTGCAACAGAGGGTaGGCGGGACAACAAGAGCATTTCGTTTTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: GCWSCLHACNRG*AGQQEHFVLLL
Trigger: CAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACCCTCTGTTGCAAGCATGAAGGCAGCTCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp ATGAGAACCGTGAGGTGTTTCGCACAGTGTCACCATTaGCTTCGTGGAAGGAGGTGTCCTGCTCCTGTGACC +
Preference number: 6 (lower is better)
Translates to: MRTVRCFAQCHH*LRGRRCPAPVT
Trigger: GGTCACAGGAGCAGGACACCTCCTTCCACGAAGCCAATGGTGACACTGTGCGAAACACCTCACGGTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp CTCACGGACACGGTTGTACAGGTCTTCCACCAGCAGTaGTTCAGCAGACTCCAGCATGCCTGGACACTCAGT +
Preference number: 6 (lower is better)
Translates to: LTDTVVQVFHQQ*FSRLQHAWTLS
Trigger: ACTGAGTGTCCAGGCATGCTGGAGTCTGCTGAACAACTGCTGGTGGAAGACCTGTACAACCGTGTCCGTGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp TTGTTCACAGCCACGCTTTTCTCAGCTATGAAGACGTaGGGCCACACCTCATCCACCTCATTCCGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: LFTATLFSAMKT*GHTSSTSFRGA
Trigger: GGCCCCTCGGAATGAGGTGGATGAGGTGTGGCCCAACGTCTTCATAGCTGAGAAAAGCGTGGCTGTGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp GATGAGAACCGTGAGGTGTTTCGCACAGTGTCACCATaGGCTTCGTGGAAGGAGGTGTCCTGCTCCTGTGAC +
Preference number: 6 (lower is better)
Translates to: DENREVFRTVSP*ASWKEVSCSCD
Trigger: GTCACAGGAGCAGGACACCTCCTTCCACGAAGCCAATGGTGACACTGTGCGAAACACCTCACGGTTCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp GTGGACCGAGAGAACTTGTGCATCTCTCTGGCCTCCTaGGTGGTGGAAGATGAGAACCGTGAGGTGTTTCGC +
Preference number: 6 (lower is better)
Translates to: VDRENLCISLAS*VVEDENREVFR
Trigger: GCGAAACACCTCACGGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp GAGCTCGAGGTCTCGCTGAATGTGGACCGAGAGAACTaGTGCATCTCTCTGGCCTCCTTGGTGGTGGAAGAT +
Preference number: 6 (lower is better)
Translates to: ELEVSLNVDREN*CISLASLVVED
Trigger: ATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCACATTCAGCGAGACCTCGAGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp TCTGTTCTGAGCCCCCGAGGCTTGAGTTCTTCGTTGATGATCTGTTaGGCAGCTACAGCCGAGGAGAGGTGGATGGGCTCCATGAAGATG +
Preference number: 6 (lower is better)
Translates to: SVLSPRGLSSSLMIC*AATAEERWMGSMKM
Trigger: CATCTTCATGGAGCCCATCCACCTCTCCTCGGCTGTAGCTGCCAAACAGATCATCAACGAAGAACTCAAGCCTCGGGGGCTCAGAACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp GGGGTGTTGAACAGGCTCCTGTCATCCATCTTCTCACGGACACGGTaGTACAGGTCTTCCACCAGCAGTTGTTCAGCAGACTCCAGCATG +
Preference number: 6 (lower is better)
Translates to: GVLNRLLSSIFSRTR*YRSSTSSCSADSSM
Trigger: CATGCTGGAGTCTGCTGAACAACTGCTGGTGGAAGACCTGTACAACCGTGTCCGTGAGAAGATGGATGACAGGAGCCTGTTCAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp TCCTCTTGCTGGTTTGTGCTTCTCCGATACTGGGACTaGCGCCCAGATGCAAACCTCCCTTCCTCTCGGTTT +
Preference number: 6 (lower is better)
Translates to: SSCWFVLLRYWD*RPDANLPSSRF
Trigger: AAACCGAGAGGAAGGGAGGTTTGCATCTGGGCGTCAGTCCCAGTATCGGAGAAGCACAAACCAGCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp AGCTGCTTTCCGGAAATGTTGGGAGATGTCCACCTCTaGGAAGTCATCCACTTCCACCCCCAGGTACTGGAT +
Preference number: 6 (lower is better)
Translates to: SCFPEMLGDVHL*EVIHFHPQVLD
Trigger: ATCCAGTACCTGGGGGTGGAAGTGGATGACTTCCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp CGTGAGGTGTTTCGCACAGTGTCACCATTGGCTTCGTaGAAGGAGGTGTCCTGCTCCTGTGACCTAGATTTG +
Preference number: 6 (lower is better)
Translates to: REVFRTVSPLAS*KEVSCSCDLDL
Trigger: CAAATCTAGGTCACAGGAGCAGGACACCTCCTTCCACGAAGCCAATGGTGACACTGTGCGAAACACCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp ACCGAGAGAACTTGTGCATCTCTCTGGCCTCCTTGGTaGTGGAAGATGAGAACCGTGAGGTGTTTCGCACAG +
Preference number: 6 (lower is better)
Translates to: TERTCASLWPPW*WKMRTVRCFAQ
Trigger: CTGTGCGAAACACCTCACGGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp CTCCCTCCTCCTTTGCAGTTTGGTTCTGGTTTCCTCTaGCCGCTTTCTCCAGGCGGCAATGATGGCTTCATC +
Preference number: 6 (lower is better)
Translates to: LPPPLQFGSGFL*PLSPGGNDGFI
Trigger: GATGAAGCCATCATTGCCGCCTGGAGAAAGCGGCAAGAGGAAACCAGAACCAAACTGCAAAGGAGGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp GTGGTGGAAGATGAGAACCGTGAGGTGTTTCGCACAGTGTCACCATaGGCTTCGTGGAAGGAGGTGTCCTGCTCCTGTGACCTAGATTTG +
Preference number: 6 (lower is better)
Translates to: VVEDENREVFRTVSP*ASWKEVSCSCDLDL
Trigger: CAAATCTAGGTCACAGGAGCAGGACACCTCCTTCCACGAAGCCAATGGTGACACTGTGCGAAACACCTCACGGTTCTCATCTTCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp TCGCTGAATGTGGACCGAGAGAACTTGTGCATCTCTCTGGCCTCCTaGGTGGTGGAAGATGAGAACCGTGAGGTGTTTCGCACAGTGTCA +
Preference number: 6 (lower is better)
Translates to: SLNVDRENLCISLAS*VVEDENREVFRTVS
Trigger: TGACACTGTGCGAAACACCTCACGGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTCGGTCCACATTCAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp GTGGCTAGTGGCATCATCTTCTTCTTCCACCATCAGTaGATTGACTCTAGCACCCAGCATGCTCCCGGCATC +
Preference number: 6 (lower is better)
Translates to: VASGIIFFFHHQ*IDSSTQHAPGI
Trigger: GATGCCGGGAGCATGCTGGGTGCTAGAGTCAATTCACTGATGGTGGAAGAAGAAGATGATGCCACTAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS GCA 72 bp ACAGAGGGTGGGCGGGACAACAAGAGCATTTCGTTTTaGTTCTGGGCGAGGGTTTCATTGACGACATTGGCA +
Preference number: 6 (lower is better)
Translates to: TEGGRDNKSISF*FWARVSLTTLA
Trigger: TGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TTGATGATCTGTTTGGCAGCTACAGCCGAGGAGAGGTaGATGGGCTCCATGAAGATGCTTTCGGTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: LMICLAATAEER*MGSMKMLSVSA
Trigger: GGCAGAAACCGAAAGCATCTTCATGGAGCCCATCCACCTCTCCTCGGCTGTAGCTGCCAAACAGATCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GCTTCGTCAAGGAACTCAGCTGCTTTCCGGAAATGTTaGGAGATGTCCACCTCTGGGAAGTCATCCACTTCC +
Preference number: 6 (lower is better)
Translates to: ASSRNSAAFRKC*EMSTSGKSSTS
Trigger: GGAAGTGGATGACTTCCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCAGCTGAGTTCCTTGACGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TGTCCTTGTTCCTACTGCAGAAGTTGTAGAAGGAGCTaGCCTCAGACAACACGCTCTCCTCATCGTCCTCTC +
Preference number: 6 (lower is better)
Translates to: CPCSYCRSCRRS*PQTTRSPHRPL
Trigger: GAGAGGACGATGAGGAGAGCGTGTTGTCTGAGGCCAGCTCCTTCTACAACTTCTGCAGTAGGAACAAGGACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GCGAGGGTTTCATTGACGACATTGGCAATCCAGTTCTaGATACTGGCAATGGAAATGGTGTCTCCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: ARVSLTTLAIQF*ILAMEMVSPGP
Trigger: GGGGCCTGGAGACACCATTTCCATTGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GGTGGGCGGGACAACAAGAGCATTTCGTTTTGCTTCTaGGCGAGGGTTTCATTGACGACATTGGCAATCCAG +
Preference number: 6 (lower is better)
Translates to: GGRDNKSISFCF*ARVSLTTLAIQ
Trigger: CTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TACCCATGCTGCGGCCATTTCTATAGTGATCAGAGATaGCCAGAGAAGAGGAGGCATCTGTCTCCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: YPCCGHFYSDQR*PEKRRHLSPAS
Trigger: AGAAGCCGGAGACAGATGCCTCCTCTTCTCTGGCCATCTCTGATCACTATAGAAATGGCCGCAGCATGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp TTTCCCGGAGCAGAGAAGACCTGGTATACCTCCCCCTaGAACTTCCGGACCAATCACTTTGAGGAGGAGATT +
Preference number: 6 (lower is better)
Translates to: FPGAEKTWYTSP*NFRTNHFEEEI
Trigger: AATCTCCTCCTCAAAGTGATTGGTCCGGAAGTTCCAGGGGGAGGTATACCAGGTCTTCTCTGCTCCGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CCA 72 bp GAGAGAACTTGTGCATCTCTCTGGCCTCCTTGGTGGTaGAAGATGAGAACCGTGAGGTGTTTCGCACAGTGT +
Preference number: 6 (lower is better)
Translates to: ERTCASLWPPWW*KMRTVRCFAQC
Trigger: ACACTGTGCGAAACACCTCACGGTTCTCATCTTCCACCACCAAGGAGGCCAGAGAGATGCACAAGTTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp AACAGGCTCCTGTCATCCATCTTCTCACGGACACGGTaGTACAGGTCTTCCACCAGCAGTTGTTCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: NRLLSSIFSRTR*YRSSTSSCSAD
Trigger: GTCTGCTGAACAACTGCTGGTGGAAGACCTGTACAACCGTGTCCGTGAGAAGATGGATGACAGGAGCCTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp AACAGAGGGTGGGCGGGACAACAAGAGCATTTCGTTTaGCTTCTGGGCGAGGGTTTCATTGACGACATTGGC +
Preference number: 6 (lower is better)
Translates to: NRGWAGQQEHFV*LLGEGFIDDIG
Trigger: GCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACCCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp TCGTCTCTGTCACCCACGCTCATGTCCTCGTCATCCTaGGCCTTCTTCTTCTTGAAGAGAGAGCTACGCTTG +
Preference number: 6 (lower is better)
Translates to: SSLSPTLMSSSS*AFFFLKRELRL
Trigger: CAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAAGGATGACGAGGACATGAGCGTGGGTGACAGAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp ATCCATCTTCTCACGGACACGGTTGTACAGGTCTTCCACCAGCAGTaGTTCAGCAGACTCCAGCATGCCTGGACACTCAGTGTCTGTTCT +
Preference number: 6 (lower is better)
Translates to: IHLLTDTVVQVFHQQ*FSRLQHAWTLSVCS
Trigger: AGAACAGACACTGAGTGTCCAGGCATGCTGGAGTCTGCTGAACAACTGCTGGTGGAAGACCTGTACAACCGTGTCCGTGAGAAGATGGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp CATGCTTGCAACAGAGGGTGGGCGGGACAACAAGAGCATTTCGTTTaGCTTCTGGGCGAGGGTTTCATTGACGACATTGGCAATCCAGTT +
Preference number: 6 (lower is better)
Translates to: HACNRGWAGQQEHFV*LLGEGFIDDIGNPV
Trigger: AACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCGCCCACCCTCTGTTGCAAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp CTGTCACCCACGCTCATGTCCTCGTCATCCTTGGCCTTCTTCTTCTaGAAGAGAGAGCTACGCTTGTTATCAGAGGCCAGCTTCTCCATT +
Preference number: 6 (lower is better)
Translates to: LSPTLMSSSSLAFFF*KRELRLLSEASFSI
Trigger: AATGGAGAAGCTGGCCTCTGATAACAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAAGGATGACGAGGACATGAGCGTGGGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp TCTGTGTCCTCGTCTCTGTCACCCACGCTCATGTCCTCGTCATCCTaGGCCTTCTTCTTCTTGAAGAGAGAGCTACGCTTGTTATCAGAG +
Preference number: 6 (lower is better)
Translates to: SVSSSLSPTLMSSSS*AFFFLKRELRLLSE
Trigger: CTCTGATAACAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAAGGATGACGAGGACATGAGCGTGGGTGACAGAGACGAGGACACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp TACATCCTCATCCTCACAGTCGTCTCCATCCTGTGCTaGGGACATAGAACAGCTACGTCCCTTTCTACCCTG +
Preference number: 6 (lower is better)
Translates to: YILILTVVSILC*GHRTATSLSTL
Trigger: CAGGGTAGAAAGGGACGTAGCTGTTCTATGTCCTCAGCACAGGATGGAGACGACTGTGAGGATGAGGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp AGCTTCGTCAAGGAACTCAGCTGCTTTCCGGAAATGTaGGGAGATGTCCACCTCTGGGAAGTCATCCACTTC +
Preference number: 6 (lower is better)
Translates to: SFVKELSCFPEM*GDVHLWEVIHF
Trigger: GAAGTGGATGACTTCCCAGAGGTGGACATCTCCCAACATTTCCGGAAAGCAGCTGAGTTCCTTGACGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp CTAGTGGCATCATCTTCTTCTTCCACCATCAGTGAATaGACTCTAGCACCCAGCATGCTCCCGGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: LVASSSSSTISE*TLAPSMLPASS
Trigger: GGAAGATGCCGGGAGCATGCTGGGTGCTAGAGTCAATTCACTGATGGTGGAAGAAGAAGATGATGCCACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp GTCTCCCGCCTCCGAGTCTTTCTTGTGAAACCCAAATaGGATTCTCTTAATCTTCCACCTTTCCAGGGGAGT +
Preference number: 6 (lower is better)
Translates to: VSRLRVFLVKPK*DSLNLPPFQGS
Trigger: ACTCCCCTGGAAAGGTGGAAGATTAAGAGAATCCAATTTGGGTTTCACAAGAAAGACTCGGAGGCGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp TCTTCCATCCTGAGGCCACTGAGCCACGTATTAATATaGCTATCCATCTCGTTACCCATGCTGCGGCCATTT +
Preference number: 6 (lower is better)
Translates to: SSILRPLSHVLI*LSISLPMLRPF
Trigger: AAATGGCCGCAGCATGGGTAACGAGATGGATAGCAATATTAATACGTGGCTCAGTGGCCTCAGGATGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp CGGGACAACAAGAGCATTTCGTTTTGCTTCTGGGCGAGGGTTTCATaGACGACATTGGCAATCCAGTTCTGGATACTGGCAATGGAAATG +
Preference number: 6 (lower is better)
Translates to: RDNKSISFCFWARVS*TTLAIQFWILAMEM
Trigger: CATTTCCATTGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTTGTTGTCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp TCTCCCTCCTCTTCAGACCTCATGAAGCTCTGGGTGAATTTCCTCTaGGCCCCAAACTCAGCGAAGTCTGATTTAGATGACTCTTCTACA +
Preference number: 6 (lower is better)
Translates to: SPSSSDLMKLWVNFL*APNSAKSDLDDSST
Trigger: TGTAGAAGAGTCATCTAAATCAGACTTCGCTGAGTTTGGGGCCAAGAGGAAATTCACCCAGAGCTTCATGAGGTCTGAAGAGGAGGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp AAGAGCATTTCGTTTTGCTTCTGGGCGAGGGTTTCATTGACGACATaGGCAATCCAGTTCTGGATACTGGCAATGGAAATGGTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: KSISFCFWARVSLTT*AIQFWILAMEMVSP
Trigger: TGGAGACACCATTTCCATTGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 90 bp TCCTCGTCATCCTTGGCCTTCTTCTTCTTGAAGAGAGAGCTACGCTaGTTATCAGAGGCCAGCTTCTCCATTTTATACTCGGACATCTTC +
Preference number: 6 (lower is better)
Translates to: SSSSLAFFFLKRELR*LSEASFSILYSDIF
Trigger: GAAGATGTCCGAGTATAAAATGGAGAAGCTGGCCTCTGATAACAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAAGGATGACGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS TCA 72 bp AGAGCATTTCGTTTTGCTTCTGGGCGAGGGTTTCATTaGCGACATTGGCAATCCAGTTCTGGATACTGGCAA +
Preference number: 6 (lower is better)
Translates to: RAFRFASGRGFH*RHWQSSSGYWQ
Trigger: TTGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp TCGTTTTGCTTCTGGGCGAGGGTTTCATTGACGACATaGGCAATCCAGTTCTGGATACTGGCAATGGAAATG +
Preference number: 6 (lower is better)
Translates to: SFCFWARVSLTT*AIQFWILAMEM
Trigger: CATTTCCATTGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp AAGAGCATTTCGTTTTGCTTCTGGGCGAGGGTTTCATaGACGACATTGGCAATCCAGTTCTGGATACTGGCA +
Preference number: 6 (lower is better)
Translates to: KSISFCFWARVS*TTLAIQFWILA
Trigger: TGCCAGTATCCAGAACTGGATTGCCAATGTCGTCAATGAAACCCTCGCCCAGAAGCAAAACGAAATGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6
CDS CAA 72 bp TCCTTGGCCTTCTTCTTCTTGAAGAGAGAGCTACGCTaGTTATCAGAGGCCAGCTTCTCCATTTTATACTCG +
Preference number: 6 (lower is better)
Translates to: SLAFFFLKRELR*LSEASFSILYS
Trigger: CGAGTATAAAATGGAGAAGCTGGCCTCTGATAACAAGCGTAGCTCTCTCTTCAAGAAGAAGAAGGCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085992.4
ENSMUST00000192369.6